Pregenerated sensors for HAUS8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035439Ensembl transcript IDs: ENSMUST00000035960.13, ENSMUST00000110071.3, ENSMUST00000123495.8
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCTAGGAGCTCCTGCCCACTTCCTTCCATGTGGACAGCCTGCATaGGCAGCTCGTGTCGCGTGGTGTCCAGGGCTCTGCCCAGTGTCA | + |
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Preference number: 1 (lower is better) Translates to: HLGAPAHFLPCGQPA*AARVAWCPGLCPVS Trigger: TGACACTGGGCAGAGCCCTGGACACCACGCGACACGAGCTGCCCATGCAGGCTGTCCACATGGAAGGAAGTGGGCAGGAGCTCCTAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | TCCAGGCTCCTGTGCGCTGGCACCCTGCACCTGTGCAGTGGCATATaGGGAGCAGATGCTCAGATCACCCAGGAGCTGCAGGGTGATCCT | + |
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Preference number: 1 (lower is better) Translates to: SRLLCAGTLHLCSGI*GADAQITQELQGDP Trigger: AGGATCACCCTGCAGCTCCTGGGTGATCTGAGCATCTGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACAGGAGCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR GCA 90 bp | AGATCATCTAGGAGCTCCTGCCCACTTCCTTCCATGTGGACAGCCTaGATGGGCAGCTCGTGTCGCGTGGTGTCCAGGGCTCTGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: RSSRSSCPLPSMWTA*MGSSCRVVSRALPS Trigger: ACTGGGCAGAGCCCTGGACACCACGCGACACGAGCTGCCCATGCAGGCTGTCCACATGGAAGGAAGTGGGCAGGAGCTCCTAGATGATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | ACACAGGCTGAAGAGGACTCAGCACCTCAATCTGGGCATCAAGGGTaGCGGCCAGCTCCTGATGTTTCTGCCGGAGAAGCAGCTGGCGCC | + |
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Preference number: 1 (lower is better) Translates to: TQAEEDSAPQSGHQG*RPAPDVSAGEAAGA Trigger: GGCGCCAGCTGCTTCTCCGGCAGAAACATCAGGAGCTGGCCGCCACCCTTGATGCCCAGATTGAGGTGCTGAGTCCTCTTCAGCCTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | TCAGCAGACAACTCAGCTGTGTGCTGGCTCCAGGCTCCTGTGCGCTaGCACCCTGCACCTGTGCAGTGGCATATGGGGAGCAGATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SADNSAVCWLQAPVR*HPAPVQWHMGSRCS Trigger: TGAGCATCTGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACAGGAGCCTGGAGCCAGCACACAGCTGAGTTGTCTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR GCA 90 bp | GAGGGCACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCAAAGCTaGTTCTTTACTGGCCTGGGAGGAAAGTTCTACCACCTGGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: EGTLCLFPDFLVHQS*FFTGLGGKFYHLAD Trigger: GTCAGCCAGGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | CACTGGCTGCTGGTGAGGGCACCCTCTGCCTCTTCCCAGACTTCCTaGTTCATCAAAGCTGCTTCTTTACTGGCCTGGGAGGAAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: HWLLVRAPSASSQTS*FIKAASLLAWEESS Trigger: AGAACTTTCCTCCCAGGCCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTCACCAGCAGCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR GCA 90 bp | AGGGAGTCCGATCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RESDLIMGGCEPPCG*WDLNSRPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCGGACTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCTGCTGAGCCATCTCACCAGCCCCTTTCTCATCTTT | + |
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Preference number: 1 (lower is better) Translates to: WLLGFELQTFGRAVG*SYLLSHLTSPFLIF Trigger: AAAGATGAGAAAGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | TCTTCCCAGACTTCCTGGTTCATCAAAGCTGCTTCTTTACTGGCCTaGGAGGAAAGTTCTACCACCTGGCTGACAAGTCTGCGGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SSQTSWFIKAASLLA*EESSTTWLTSLRSS Trigger: GGAGCTCCGCAGACTTGTCAGCCAGGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | GAGTCCGATCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLIMGGCEPPCGC*DLNSRPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | ATCAAAGCTGCTTCTTTACTGGCCTGGGAGGAAAGTTCTACCACCTaGCTGACAAGTCTGCGGAGCTCCAGGTCTTTCTCAGTGACCAAG | + |
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Preference number: 1 (lower is better) Translates to: IKAASLLAWEESSTT*LTSLRSSRSFSVTK Trigger: CTTGGTCACTGAGAAAGACCTGGAGCTCCGCAGACTTGTCAGCCAGGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGCAGCTTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR TCA 90 bp | CAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAATaGGCAGAAAGGCCAGCTAGGAAATACTCAGGTAGGACAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: QTSFGPQGGGMRKHK*AERPARKYSGRTGC Trigger: GCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTCTGCTCATTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | GCTTACACTTCCACATTGTTGTCCATCACCAAAGAAAGTCAGGACTaGAACTCAAGCAGGGCAGGAAGCAGAGGCCATGGAAGGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: AYTSTLLSITKESQD*NSSRAGSRGHGRVF Trigger: AAACACCCTTCCATGGCCTCTGCTTCCTGCCCTGCTTGAGTTCCAGTCCTGACTTTCTTTGGTGATGGACAACAATGTGGAAGTGTAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | CTCAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATaGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: LSLLSLLSLEPKPSR*CGQDWCFFPPQDKN Trigger: GTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTaGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LAFFTQFRTQTQQMV*PRLVFLPTSRQKPK Trigger: CTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR GCA 90 bp | ATATGTCTGAGCAAATGTTATTGGGACAGCACTCATTTTCCTCTATaGAATCATGTAAAGCCAAGGCTCAAGAGCCCCAGCGTATACATC | + |
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Preference number: 1 (lower is better) Translates to: ICLSKCYWDSTHFPL*NHVKPRLKSPSVYI Trigger: GATGTATACGCTGGGGCTCTTGAGCCTTGGCTTTACATGATTGCATAGAGGAAAATGAGTGCTGTCCCAATAACATTTGCTCAGACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR TCA 90 bp | TATATATGTTGGTGCCCTTGCATTTGGAGCACAGATATTCAGAATTaGGTGTTCCTCTTGGTAGATTTTTCTTTTGACCAGCATGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: YICWCPCIWSTDIQN*VFLLVDFSFDQHEV Trigger: CACTTCATGCTGGTCAAAAGAAAAATCTACCAAGAGGAACACTCAATTCTGAATATCTGTGCTCCAAATGCAAGGGCACCAACATATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR TCA 90 bp | TCCATCAATGAGAGTGGGGTGTTAAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCTTTGAGCTTTAGTAAAGTTTCTTTTATA | + |
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Preference number: 1 (lower is better) Translates to: SINESGVLKSPTIIV*GAMCALSFSKVSFI Trigger: TATAAAAGAAACTTTACTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTTAACACCCCACTCTCATTGATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGGCTGCTGGTGAGGGCACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCAGATCACCCAGGAGCTaGAGGGTGATCCTCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: HWLLVRAPSASSQTSWFIRSPRS*RVILRA Trigger: AGCCCTGAGGATCACCCTGCAGCTCCTGGGTGATCT...GATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTCACCAGCAGCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGCCCTCCTGCAGGCATCTGGACTaGAGTACCACTGGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: YRTQDYQPRDGPTHKGPSCRHLD*STTGCW Trigger: CCAGCAGCCAGTGGTACTTCAGTCCAGATGCCTGCA...GGAGGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAGTAGGACAGGCTGCCTaGGGCAATCAAGGGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RTQTQQMVWPRLVFLPTSVGQAA*GNQGSG Trigger: GCCTGACCCTTGATTGCCTCAGGCAGCCTGTCCTAC...TGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCAAAGCTGCTTCTTTACTGGTCCATGTGGACAGCCTaGATGGGCAGCTCGTGTCGC | + |
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Preference number: 2 (lower is better) Translates to: HPLPLPRLPGSSKLLLYWSMWTA*MGSSCR Trigger: GCGACACGAGCTGCCCATGCAGGCTGTCCACATGGA...CCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CAA 90 bp | GATCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCAGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCTGC | + |
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Preference number: 2 (lower is better) Translates to: DLIMGGCEPPCGCWD*NSRPSEEQSGALTC Trigger: GCAGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCAAAGCTGCTTCTTTACGAAGCTCCAGTGCCTaGCTCTGCAACCTCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RAPSASSQTSWFIKAASLRSSSA*LCNLSF Trigger: GAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCG...TAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAAGGCTCAAGAGCCCCAGCGTATACATCTTTCCATATATATCTCAAACCGTAGGACAGGCTGCCTaGGGCAATCAAGGGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KPRLKSPSVYIFPYISQTVGQAA*GNQGSG Trigger: GCCTGACCCTTGATTGCCTCAGGCAGCCTGTCCTAC...GGTTTGAGATATATATGGAAAGATGTATACGCTGGGGCTCTTGAGCCTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | CATATATATCTCAAACCCCTAGACTTGGGAGTTGTTCTCCTAACCTACGGAGCGTGTGCGCTGGCACCCTaGACCTGTGCAGTGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: HIYLKPLDLGVVLLTYGACALAP*TCAVAY Trigger: ATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACA...CGCTCCGTAGGTTAGGAGAACAACTCCCAAGTCTAGGGGTTTGAGATATATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTACACTTCCACATTGTTGTCCATCACCAAAGAAAGTCAGGACTGGAACTCGACAACTCAGCTGTGTaGTGGCTCCAGGCTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLHFHIVVHHQRKSGLELDNSAV*WLQAPV Trigger: CACAGGAGCCTGGAGCCAGCACACAGCTGAGTTGTC...GAGTTCCAGTCCTGACTTTCTTTGGTGATGGACAACAATGTGGAAGTGTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTTCCTTGTAGGACAGGCTGCCTaGGGCAATCAAGGGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KPKPKCTSFQNTGPPNFLVGQAA*GNQGSG Trigger: GCCTGACCCTTGATTGCCTCAGGCAGCCTGTCCTAC...AAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAAGCTTTCAGAATACTaGACCACCAAACTTCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: RTQTQQMVWPRLVFLPTSKLSEY*TTKLPS Trigger: CGAAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTT...TGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAACATATGTCTGAGCAAATGTTATTGGGACAGCACTCATTTTCCTCTATGGCAGCTCGTGTCGCGTaGTGTCCAGGGCTCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SKHMSEQMLLGQHSFSSMAARVA*CPGLCP Trigger: TGGGCAGAGCCCTGGACACCACGCGACACGAGCTGC...CATAGAGGAAAATGAGTGCTGTCCCAATAACATTTGCTCAGACATATGTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCAAAGCTGCTTCTTTAAAGCTTTCAGAATACTaGACCACCAAACTTCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: RAPSASSQTSWFIKAASLKLSEY*TTKLPS Trigger: CGAAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTT...TAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGATGAGGAAACATAAATaGGCAGAAAGGCCAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: FFTQFRTQTQQMVWPRLVMRKHK*AERPAR Trigger: CCTAGCTGGCCTTTCTGCTCATTTATGTTTCCTCAT...CACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGTATTTGCTTCTTTTTGTTCTAGAGCTTTCAGGTATACTGCCAAGCTGCGCTCTAACACAGGCTaGAGAGGACTCAGCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGVFASFCSRAFRYTAKLRSNTG*RGLSTS Trigger: TGAGGTGCTGAGTCCTCTTCAGCCTGTGTTAGAGCG...CAGCTTGGCAGTATACCTGAAAGCTCTAGAACAAAAAGAAGCAAATACACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGTTTCTTTTATATATGTTGGTGCCCTTGCATTTGGAGCACAGATATTCGCGCCGAAGCTCCAGTaGCTGCCTCTGCAACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SKVSFIYVGALAFGAQIFAPKLQ*LPLQPL Trigger: GAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGC...GAATATCTGTGCTCCAAATGCAAGGGCACCAACATATATAAAAGAAACTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | AATTGCTCAAAACATATGTCTGAGCAAATGTTATTGGGACAGCACTCATTTTCCGGTGAGGGCACCCTCTaGCTCTTCCCAGACTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NCSKHMSEQMLLGQHSFSGEGTL*LFPDFL Trigger: CAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTCACC...GGAAAATGAGTGCTGTCCCAATAACATTTGCTCAGACATATGTTTTGAGCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGAAACCAAAACCAAAGTaGACAAGCTTTCAGAATACT | + |
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Preference number: 2 (lower is better) Translates to: NPNPADGVAKTGVSSHLKKPKPK*TSFQNT Trigger: AGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR-3UTR GCA 90 bp | GAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAAAACCAAAACCAAAGTaGACAAGCTTTCAGAATACT | + |
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Preference number: 2 (lower is better) Translates to: EPKPSRWCGQDWCFFPPQKPKPK*TSFQNT Trigger: AGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT...TTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCTCAAAACATATGTCTGAGCAAATGTTATTGGGACAGCACTCATTTTCCCCTGCACCTGTGCAGTaGCATATGGGGAGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: NCSKHMSEQMLLGQHSFSPAPVQ*HMGSRC Trigger: GCATCTGCTCCCCATATGCCACTGCACAGGTGCAGG...GGAAAATGAGTGCTGTCCCAATAACATTTGCTCAGACATATGTTTTGAGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCATATATATCTCAAACCCCTAGACTTGGGAGTTGTTCTCCTAACCTACGGTCATGTATTCCTCTTTaGAGCGCTCTAACACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FPYISQTPRLGSCSPNLRSCIPL*SALTQA Trigger: AGCCTGTGTTAGAGCGCTTCAAAGAGGAATACATGA...CCGTAGGTTAGGAGAACAACTCCCAAGTCTAGGGGTTTGAGATATATATGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CAA 90 bp | TCTGTCTATGGTAATTGCTCAAAACATATGTCTGAGCAAATGTTATaGGGACAGCACTCATTTTCCTCTATGCAATCATGTAAAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SVYGNCSKHMSEQML*GQHSFSSMQSCKAK Trigger: CTTGGCTTTACATGATTGCATAGAGGAAAATGAGTGCTGTCCCAATAACATTTGCTCAGACATATGTTTTGAGCAATTACCATAGACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 72 bp | GCTCCTGCCCACTTCCTTCCATGTGGACAGCCTGCATaGGCAGCTCGTGTCGCGTGGTGTCCAGGGCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: APAHFLPCGQPA*AARVAWCPGLC Trigger: GCAGAGCCCTGGACACCACGCGACACGAGCTGCCCATGCAGGCTGTCCACATGGAAGGAAGTGGGCAGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR GCA 72 bp | AGGAGCTCCTGCCCACTTCCTTCCATGTGGACAGCCTaGATGGGCAGCTCGTGTCGCGTGGTGTCCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RSSCPLPSMWTA*MGSSCRVVSRA Trigger: AGCCCTGGACACCACGCGACACGAGCTGCCCATGCAGGCTGTCCACATGGAAGGAAGTGGGCAGGAGCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR GCA 72 bp | GGCTCCAGGCTCCTGTGCGCTGGCACCCTGCACCTGTaGAGTGGCATATGGGGAGCAGATGCTCAGATCACC | + |
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Preference number: 3 (lower is better) Translates to: GSRLLCAGTLHL*SGIWGADAQIT Trigger: GGTGATCTGAGCATCTGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACAGGAGCCTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 72 bp | AACTCAGCTGTGTGCTGGCTCCAGGCTCCTGTGCGCTaGCACCCTGCACCTGTGCAGTGGCATATGGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: NSAVCWLQAPVR*HPAPVQWHMGS Trigger: GCTCCCCATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACAGGAGCCTGGAGCCAGCACACAGCTGAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| 3UTR CCA 72 bp | CTGTGCGCTGGCACCCTGCACCTGTGCAGTGGCATATaGGGAGCAGATGCTCAGATCACCCAGGAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCAGTLHLCSGI*GADAQITQELQ Trigger: CTGCAGCTCCTGGGTGATCTGAGCATCTGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CAGGCTCCTGTGCGCTGGCACCCTGCACCTGTGCAGTaGCATATGGGGAGCAGATGCTCAGATCACCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QAPVRWHPAPVQ*HMGSRCSDHPG Trigger: TCCTGGGTGATCTGAGCATCTGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACAGGAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CCATGTGGACAGCCTGCATGGGCAGCTCGTGTCGCGTaGTGTCCAGGGCTCTGCCCAGTGTCATGTATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCGQPAWAARVA*CPGLCPVSCIP Trigger: AGGAATACATGACACTGGGCAGAGCCCTGGACACCACGCGACACGAGCTGCCCATGCAGGCTGTCCACATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CCTTCAGTTCCTTCAGCAGACAACTCAGCTGTGTGCTaGCTCCAGGCTCCTGTGCGCTGGCACCCTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: PSVPSADNSAVC*LQAPVRWHPAP Trigger: AGGTGCAGGGTGCCAGCGCACAGGAGCCTGGAGCCAGCACACAGCTGAGTTGTCTGCTGAAGGAACTGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CTATCATCCCTGCAGGCATCTGGACTGAAGTACCACTaGCTGCTGGTGAGGGCACCCTCTGCCTCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSLQASGLKYH*LLVRAPSASSQ Trigger: CTGGGAAGAGGCAGAGGGTGCCCTCACCAGCAGCCAGTGGTACTTCAGTCCAGATGCCTGCAGGGATGATAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR GCA 72 bp | GCATATGGGGAGCAGATGCTCAGATCACCCAGGAGCTaGAGGGTGATCCTCAGGGCTGGCTCCAGATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AYGEQMLRSPRS*RVILRAGSRSS Trigger: AGATGATCTGGAGCCAGCCCTGAGGATCACCCTGCAGCTCCTGGGTGATCTGAGCATCTGCTCCCCATATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CCTGTCCTAAGAGGGACTATCATCCCTGCAGGCATCTaGACTGAAGTACCACTGGCTGCTGGTGAGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PVLRGTIIPAGI*TEVPLAAGEGT Trigger: GGTGCCCTCACCAGCAGCCAGTGGTACTTCAGTCCAGATGCCTGCAGGGATGATAGTCCCTCTTAGGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR TCA 72 bp | TGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCAGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WVVVSHHVVAGI*TPDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR GCA 72 bp | GGATTTGAACTCCAGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCTGCTGAGCCATCTCACCAGCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GFELQTFGRAVG*SYLLSHLTSPF Trigger: AAAGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | GCTTCTTTACTGGCCTGGGAGGAAAGTTCTACCACCTaGCTGACAAGTCTGCGGAGCTCCAGGTCTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASLLAWEESSTT*LTSLRSSRSFS Trigger: TGAGAAAGACCTGGAGCTCCGCAGACTTGTCAGCCAGGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR GCA 72 bp | GAAAGGCCAGCTAGGAAATACTCAGGTAGGACAGGCTaGCTGAGGCAATCAAGGGTCAGGCCTGCTGTAATT | + |
|
Preference number: 3 (lower is better) Translates to: ERPARKYSGRTG*LRQSRVRPAVI Trigger: AATTACAGCAGGCCTGACCCTTGATTGCCTCAGGCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CTCATTATGGGTGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LIMGGCEPPCGC*DLNSRPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | TTCCGACACTCCAGAAGAGGGAGTCCGATCTCATTATaGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: FRHSRRGSPISL*VVVSHHVVAGI Trigger: AATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATCGGACTCCCTCTTCTGGAGTGTCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR GCA 72 bp | CTCTGCCTCTTCCCAGACTTCCTGGTTCATCAAAGCTaGTTCTTTACTGGCCTGGGAGGAAAGTTCTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LCLFPDFLVHQS*FFTGLGGKFYH Trigger: GTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR GCA 72 bp | GATCTCATTATGGGTGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCAGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLIMGGCEPPCG*WDLNSRPSEEQ Trigger: CTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR TCA 72 bp | GTCATGTATTCCTCTTTGAAGCGCTCTAACACAGGCTaGAGAGGACTCAGCACCTCAATCTGGGCATCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VMYSSLKRSNTG*RGLSTSIWASR Trigger: CCTTGATGCCCAGATTGAGGTGCTGAGTCCTCTTCAGCCTGTGTTAGAGCGCTTCAAAGAGGAATACATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | ACTTCCTGGTTCATCAAAGCTGCTTCTTTACTGGCCTaGGAGGAAAGTTCTACCACCTGGCTGACAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSWFIKAASLLA*EESSTTWLTSL Trigger: CAGACTTGTCAGCCAGGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTACACTTCCACATTGTTGTCCATCACCAAAGAAAGTCAGGACTGGAACTCCCAGCCTGTGTCAAGTaGACACACAAAACCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLHFHIVVHHQRKSGLELPACVK*THKTSQ Trigger: CTGGCTGGTTTTGTGTGTCAACTTGACACAGGCTGG...GAGTTCCAGTCCTGACTTTCTTTGGTGATGGACAACAATGTGGAAGTGTAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTaGACCACCAAACTTCCTTCGGTCCACAAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QTKTKVHKLSEY*TTKLPSVHKEE Trigger: CTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | TTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTaGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: FTQFRTQTQQMV*PRLVFLPTSRQ Trigger: TTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| 3UTR CCA 72 bp | CTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATaGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLLSLEPKPSR*CGQDWCFFPPQ Trigger: TTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCCAGCGTATACATCTTTCCATATATATCTCAAACCCCTAGACTTGGGAGTGAAGAAGAGGTAACTTaGTTCCCAGTCCCAGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: SPSVYIFPYISQTPRLGSEEEVT*FPVPGI Trigger: TATTCCTGGGACTGGGAACAAAGTTACCTCTTCTTC...ACTCCCAAGTCTAGGGGTTTGAGATATATATGGAAAGATGTATACGCTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR TCA 72 bp | GAGAGTGGGGTGTTAAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCTTTGAGCTTTAGTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ESGVLKSPTIIV*GAMCALSFSKV Trigger: AACTTTACTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTTAACACCCCACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGCTTACACTTCCACATTGTTGTCCATCACCAAAGAAAGTCAGGACTGGAATTTTTACTGGCTTGCTaGCTTATAGAACCCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: FSLHFHIVVHHQRKSGLEFLLAC*LIEPKT Trigger: AGTCTTGGGTTCTATAAGCAAGCAAGCCAGTAAAAA...TTCCAGTCCTGACTTTCTTTGGTGATGGACAACAATGTGGAAGTGTAAGCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR TCA 72 bp | GTTTATTACATAGTGTCTTCCTGGACACTGTCTTCATaGCCAAGAAGCAAGTTGTGTAGGAAAGGGTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: VYYIVSSWTLSS*PRSKLCRKGFI Trigger: AATAAACCCTTTCCTACACAACTTGCTTCTTGGTCATGAAGACAGTGTCCAGGAAGACACTATGTAATAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTTCAGCTTGCATGTGTATGTGTGCTTTCCGTTGTTTTTGTTGGTATTTACACAGATATTCAGAATaGAGTGTTCCTCTTGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CSSACMCMCAFRCFCWYLHRYSE*SVPLGR Trigger: TCTACCAAGAGGAACACTCAATTCTGAATATCTGTG...TAAATACCAACAAAAACAACGGAAAGCACACATACACATGCAAGCTGAACTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGGCAGCTCGTGTCGCGTaGTGTCCAGGGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPNPADGVAKTGVSSHLKAARVA*CPGLCP Trigger: TGGGCAGAGCCCTGGACACCACGCGACACGAGCTGC...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | GAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAACCACTGGCTGCTGGTaGGGGCACCCTCTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPKPSRWCGQDWCFFPPQTTGCW*GHPLPL Trigger: AAGAGGCAGAGGGTGCCCTCACCAGCAGCCAGTGGT...TTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGAACCACTGGCTGCTGGTaGGGGCACCCTCTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRTTGCW*GHPLPL Trigger: AAGAGGCAGAGGGTGCCCTCACCAGCAGCCAGTGGT...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGAGCGCCGAAGCTCCAGTaGCTGCCTCTGCAACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRAPKLQ*LPLQPL Trigger: GAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGC...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | CACTGGCTGCTGGTGAGGGCACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCTCCTTCCCTTTGTCTTaGGAACAGCACAAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HWLLVRAPSASSQTSWFISFPLS*EQHKHQ Trigger: CTGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGA...GATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTCACCAGCAGCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | GAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAATGTGCGCTGGCACCCTaGACCTGTGCAGTGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EPKPSRWCGQDWCFFPPQCALAP*TCAVAY Trigger: ATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACA...TTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAGACAACTCAGCTGTGTaGTGGCTCCAGGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQTQQMVWPRLVFLPTSDNSAV*WLQAPV Trigger: CACAGGAGCCTGGAGCCAGCACACAGCTGAGTTGTC...TGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | GATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAGCAGCTCGTGTCGCGTaGTGTCCAGGGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGVAKTGVSSHLKTKTKAAARVA*CPGLCP Trigger: TGGGCAGAGCCCTGGACACCACGCGACACGAGCTGC...TGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | GAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAACCTGCACCTGTGCAGTaGCATATGGGGAGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EPKPSRWCGQDWCFFPPQPAPVQ*HMGSRC Trigger: GCATCTGCTCCCCATATGCCACTGCACAGGTGCAGG...TTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| 3UTR CAA 72 bp | ATGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCAGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCEPPCGCWD*NSRPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR TCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGCGCTCTAACACAGGCTaGAGAGGACTCAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPNPADGVAKTGVSSHLKRSNTG*RGLSTS Trigger: TGAGGTGCTGAGTCCTCTTCAGCCTGTGTTAGAGCG...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AACATAAATGAGCAGAAAGGCCAGCTAGGAAATACTCAGGTAGGACAGGCTGCCACAAGCACCAGCAGCTaGAGACTTCCCTGCGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NINEQKGQLGNTQVGQAATSTSS*RLPCVP Trigger: CGGGACGCAGGGAAGTCTGCAGCTGCTGGTGCTTGT...GGCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTCTGCTCATTTATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCAGCGCCGAAGCTCCAGTaGCTGCCTCTGCAACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPAPKLQ*LPLQPL Trigger: GAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGC...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCATCCATGTGGACAGCCTaGATGGGCAGCTCGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPSMWTA*MGSSCR Trigger: GCGACACGAGCTGCCCATGCAGGCTGTCCACATGGA...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CTGGACCACCAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAAAGATCACCCAGGAGCTaGAGGGTGATCCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDHQTSFGPQGGGMRKHKRSPRS*RVILRA Trigger: AGCCCTGAGGATCACCCTGCAGCTCCTGGGTGATCT...TTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CTGGACCACCAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAAGACAACTCAGCTGTGTaGTGGCTCCAGGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDHQTSFGPQGGGMRKHKDNSAV*WLQAPV Trigger: CACAGGAGCCTGGAGCCAGCACACAGCTGAGTTGTC...TTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGATTTCCTTCCCTCAGGTaGCTTCTCTTCTTTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRFPSLR*LLFFGR Trigger: GCGGCCAAAGAAGAGAAGCCACCTGAGGGAAGGAAA...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAACTCAGCTGTGTGCTaGCTCCAGGCTCCTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPNSAVC*LQAPVR Trigger: GCGCACAGGAGCCTGGAGCCAGCACACAGCTGAGTT...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | GATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCATGCAGGCATCTGGACTaGAGTACCACTGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGVAKTGVSSHLKTKTKACRHLD*STTGCW Trigger: CCAGCAGCCAGTGGTACTTCAGTCCAGATGCCTGCA...TGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCAACAAGCACCAGCAGCTaGAGACTTCCCTGCGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPTSTSS*RLPCVP Trigger: CGGGACGCAGGGAAGTCTGCAGCTGCTGGTGCTTGT...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACCACCAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAACGAAGCTCCAGTGCCTaGCTCTGCAACCTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDHQTSFGPQGGGMRKHKRSSSA*LCNLSF Trigger: GAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCG...TTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGATCCATGTGGACAGCCTaGATGGGCAGCTCGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFFTQFRTQTQQMVWPRSMWTA*MGSSCR Trigger: GCGACACGAGCTGCCCATGCAGGCTGTCCACATGGA...TCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGAGGCACCCTGCACCTGTaGAGTGGCATATGGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAFFTQFRTQTQQMVWPRGTLHL*SGIWGA Trigger: TGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCC...TCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCATGTGCGCTGGCACCCTaGACCTGTGCAGTGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPCALAP*TCAVAY Trigger: ATATGCCACTGCACAGGTGCAGGGTGCCAGCGCACA...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGAGGTGAGGGCACCCTCTaGCTCTTCCCAGACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAFFTQFRTQTQQMVWPRGEGTL*LFPDFL Trigger: CAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTCACC...TCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGGTGAGGGCACCCTCTaGCTCTTCCCAGACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLSLEPKPSRWCGQGEGTL*LFPDFL Trigger: CAGGAAGTCTGGGAAGAGGCAGAGGGTGCCCTCACC...TTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGTCCTTCCCTTTGTCTTaGGAACAGCACAAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPNPADGVAKTGVSSHLKSFPLS*EQHKHQ Trigger: CTGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGA...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | AGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCATGTCATTTCCCTGTCTaGCCAAGAAGCCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTQTQQMVWPRLVFLPTSCHFPV*PRSLPG Trigger: TCCAGGAAGGCTTCTTGGCCAGACAGGGAAATGACA...TGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | CTGGACCACCAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAACCAGGTCTTTCTCAGTaGCCAAGCCCTTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDHQTSFGPQGGGMRKHKPGLSQ*PSPSVP Trigger: AGGAACTGAAGGGCTTGGTCACTGAGAAAGACCTGG...TTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACCACTCTTCTTCCTTaGACTCTCCTTCCCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NPNPADGVAKTGVSSHLKTTLLP*TLLPFV Trigger: GACAAAGGGAAGGAGAGTGCAAGGAAGAAGAGTGGT...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCACGAAGCTCCAGTGCCTaGCTCTGCAACCTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPRSSSA*LCNLSF Trigger: GAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCG...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCAAGATCACCCAGGAGCTaGAGGGTGATCCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPRSPRS*RVILRA Trigger: AGCCCTGAGGATCACCCTGCAGCTCCTGGGTGATCT...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGGTGGCTTCTCTTCTTTaGCCGCTCCAGAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPNPADGVAKTGVSSHLKVASLL*PLQKPF Trigger: AAAAGGTTTCTGGAGCGGCCAAAGAAGAGAAGCCAC...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGAGTGGCTTCTCTTCTTTaGCCGCTCCAGAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRVASLL*PLQKPF Trigger: AAAAGGTTTCTGGAGCGGCCAAAGAAGAGAAGCCAC...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | GAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAACTTTCTCATGGCACATaGCTGCCAAGTCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPKPSRWCGQDWCFFPPQLSHGT*LPSLSL Trigger: CAGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAG...TTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGAAACCTCTCTTTCTCATaGCACATGGCTGCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRNLSFS*HMAAKS Trigger: AGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTT...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAACCTGTCCCCATCACTTaGCTCTCTCTGCTCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLSLEPKPSRWCGQPVPIT*LSLLLG Trigger: GCCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGG...TTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCACCTGTCCCCATCACTTaGCTCTCTCTGCTCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPPVPIT*LSLLLG Trigger: GCCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGG...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGATCATGTATTCCTCTTTaGAGCGCTCTAACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRSCIPL*SALTQA Trigger: AGCCTGTGTTAGAGCGCTTCAAAGAGGAATACATGA...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGCCAGGTCTTTCTCAGTaGCCAAGCCCTTCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFTQFRTQTQQMVWPRLVPGLSQ*PSPSVP Trigger: AGGAACTGAAGGGCTTGGTCACTGAGAAAGACCTGG...CACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AACCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAACAAGCACCAGCAGCTaGAGACTTCCCTGCGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NQSKPKPKCTSFQNTGPPTSTSS*RLPCVP Trigger: CGGGACGCAGGGAAGTCTGCAGCTGCTGGTGCTTGT...TGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTCTCATGGCACATGGCTaGCAAGTCTTTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLEPKPSRWCGQDWCLMAHG*QVFLCP Trigger: AGGGCAGAGAAAGACTTGGCAGCCATGTGCCATGAG...ACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCATCCAGTGCCTGCCTCTaGAACCTCTCTTTCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPSSACL*NLSFSW Trigger: CCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGA...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | GATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCATCATCTAGGAGCTCCTaGCCACTTCCTTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGVAKTGVSSHLKTKTKASSRSS*PLPSMW Trigger: CCACATGGAAGGAAGTGGGCAGGAGCTCCTAGATGA...TGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTCATCTAGGAGCTCCTaGCCACTTCCTTCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLEPKPSRWCGQDWCSSRSS*PLPSMW Trigger: CCACATGGAAGGAAGTGGGCAGGAGCTCCTAGATGA...ACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCATTTCCTTCCCTCAGGTaGCTTCTCTTCTTTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPFPSLR*LLFFGR Trigger: GCGGCCAAAGAAGAGAAGCCACCTGAGGGAAGGAAA...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACCACCAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAATGTCATTTCCCTGTCTaGCCAAGAAGCCTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDHQTSFGPQGGGMRKHKCHFPV*PRSLPG Trigger: TCCAGGAAGGCTTCTTGGCCAGACAGGGAAATGACA...TTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS-3UTR CCA 90 bp | GATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCACTGTGCAGTGGCATATaGGGAGCAGATGCTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: DGVAKTGVSSHLKTKTKALCSGI*GADAQI Trigger: GATCTGAGCATCTGCTCCCCATATGCCACTGCACAG...TGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS-3UTR CCA 90 bp | AACCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTCAGCTGTGTGCTaGCTCCAGGCTCCTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NQSKPKPKCTSFQNTGPPNSAVC*LQAPVR Trigger: GCGCACAGGAGCCTGGAGCCAGCACACAGCTGAGTT...TGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCATCTTCCCAGACTTCCTaGTTCATCAAAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTQTQQMVWPRLVFLPTSSSQTS*FIKAAS Trigger: AGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGA...TGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGTCTTCCCAGACTTCCTaGTTCATCAAAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPNPADGVAKTGVSSHLKSSQTS*FIKAAS Trigger: AGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGA...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGCATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFTQFRTQTQQMVWPRLVHQQCL*LHHVHG Trigger: ACCATGGACATGATGGAGTCACAGACACTGCTGATG...CACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAATGCAGGCATCTGGACTaGAGTACCACTGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKQTKTKVHKLSEYWTTKCRHLD*STTGCW Trigger: CCAGCAGCCAGTGGTACTTCAGTCCAGATGCCTGCA...TTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGTAACATAGGTATCACAATTTCTGGCAGTCTCCTGGGGTTCCTGAGAGCTTTCTTGTCATATTaGAGATACCGGGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PASNIGITISGSLLGFLRAFLSY*RYRDST Trigger: GGTGGAGTCCCGGTATCTGCAATATGACAAGAAAGC...TCTCAGGAACCCCAGGAGACTGCCAGAAATTGTGATACCTATGTTACTGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGGGTGGATTCATGCCATaGCCTTCTAGCATGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFTQFRTQTQQMVWPRLVGGFMP*PSSMVD Trigger: GTCTACCATGCTAGAAGGGCATGGCATGAATCCACC...CACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCACTCATGGCACATGGCTaGCAAGTCTTTCTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPLMAHG*QVFLCP Trigger: AGGGCAGAGAAAGACTTGGCAGCCATGTGCCATGAG...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTTCCTTGGCACCCTGCACCTGTaGAGTGGCATATGGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPKPKCTSFQNTGPPNFLGTLHL*SGIWGA Trigger: TGCTCCCCATATGCCACTGCACAGGTGCAGGGTGCC...AAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCATTTCCTTCCCTCAGGTaGCTTCTCTTCTTTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPFPSLR*LLFFGR Trigger: GCGGCCAAAGAAGAGAAGCCACCTGAGGGAAGGAAA...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAACCTGTCCCCATCACTTaGCTCTCTTCTCTGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLSLEPKPSRWCGQPVPIT*LSSLLL Trigger: TAGGAGCAGAGAAGAGAGCCAAGTGATGGGGACAGG...TTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035960.13 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACCTGCACCTGTGCAGTaGCATATGGGGAGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PKQTKTKVHKLSEYWTTKPAPVQ*HMGSRC Trigger: GCATCTGCTCCCCATATGCCACTGCACAGGTGCAGG...TTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGGCTTCTTTACTGGCCTaGGAGGAAAGTTCTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: FFTQFRTQTQQMVWPRLVASLLA*EESSTT Trigger: GGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGC...CACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AACATAAATGAGCAGAAAGGCCAGCTAGGAAATACTCAGGTAGGACAGGCTGCCGCTTCTTTACTGGCCTaGGAGGAAAGTTCTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: NINEQKGQLGNTQVGQAAASLLA*EESSTT Trigger: GGTGGTAGAACTTTCCTCCCAGGCCAGTAAAGAAGC...GGCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTCTGCTCATTTATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACGCTCTAACACAGGCTaGAGAGGACTCAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQTKTKVHKLSEYWTTKRSNTG*RGLSTS Trigger: TGAGGTGCTGAGTCCTCTTCAGCCTGTGTTAGAGCG...TTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTACCACTCTTCTTCCTTaGACTCTCCTTCCCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLEPKPSRWCGQDWCTTLLP*TLLPFV Trigger: GACAAAGGGAAGGAGAGTGCAAGGAAGAAGAGTGGT...ACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | GATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAGCTTTCTTGTCATATTaGAGATACCGGGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DGVAKTGVSSHLKTKTKAAFLSY*RYRDST Trigger: GGTGGAGTCCCGGTATCTGCAATATGACAAGAAAGC...TGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | CATATATATCTCAAACCCCTAGACTTGGGAGTTGTTCTCCTAACCTACGGAGCGGGTGGATTCATGCCATaGCCTTCTAGCATGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HIYLKPLDLGVVLLTYGAGGFMP*PSSMVD Trigger: GTCTACCATGCTAGAAGGGCATGGCATGAATCCACC...CGCTCCGTAGGTTAGGAGAACAACTCCCAAGTCTAGGGGTTTGAGATATATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAATGTCCATGGTCTCCTaGAGATCCCGTCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLAFFTQFRTQTQQMVWPMSMVS*RSRLFF Trigger: GAAGAAAAGACGGGATCTGCAGGAGACCATGGACAT...TGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAATCCTTCCCTTTGTCTTaGGAACAGCACAAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLSLEPKPSRWCGQSFPLS*EQHKHQ Trigger: CTGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGA...TTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CCA 90 bp | GATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAGCCAAGAAGCCTTCCTaGACAAGATTTTGTCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DGVAKTGVSSHLKTKTKAAKKPS*TRFCRR Trigger: TCGACGACAAAATCTTGTCCAGGAAGGCTTCTTGGC...TGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTCTTTCTCATGGCACATaGCTGCCAAGTCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLEPKPSRWCGQDWCLSHGT*LPSLSL Trigger: CAGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAG...ACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | AACATAAATGAGCAGAAAGGCCAGCTAGGAAATACTCAGGTAGGACAGGCTGCCAACCTCTCTTTCTCATaGCACATGGCTGCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NINEQKGQLGNTQVGQAANLSFS*HMAAKS Trigger: AGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTT...GGCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTCTGCTCATTTATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGAGCTTTCTTGTCATATTaGAGATACCGGGACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAFFTQFRTQTQQMVWPRAFLSY*RYRDST Trigger: GGTGGAGTCCCGGTATCTGCAATATGACAAGAAAGC...TCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCAATGTCCATGGTCTCCTaGAGATCCCGTCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPMSMVS*RSRLFF Trigger: GAAGAAAAGACGGGATCTGCAGGAGACCATGGACAT...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGAGCCAAGAAGCCTTCCTaGACAAGATTTTGTCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LAFFTQFRTQTQQMVWPRAKKPS*TRFCRR Trigger: TCGACGACAAAATCTTGTCCAGGAAGGCTTCTTGGC...TCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTGTGCAGTGGCATATaGGGAGCAGATGCTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PKQTKTKVHKLSEYWTTKLCSGI*GADAQI Trigger: GATCTGAGCATCTGCTCCCCATATGCCACTGCACAG...TTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| 3UTR CAA 72 bp | CATCGGGCAGAACAAACGCATCACACTGTACTCAGCTaGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRAEQTHHTVLS*LSLLSLEPKPS Trigger: GCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCTGAGTACAGTGTGATGCGTTTGTTCTGCCCGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCAAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKQTKTKVHKLSEYWTTKHQQCL*LHHVHG Trigger: ACCATGGACATGATGGAGTCACAGACACTGCTGATG...TTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTTGCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAATCATGTATTCCTCTTTaGAGCGCTCTAACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLSLEPKPSRWCGQSCIPL*SALTQA Trigger: AGCCTGTGTTAGAGCGCTTCAAAGAGGAATACATGA...TTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR GCA 90 bp | AAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTTCCTTTCCAGTGCCTGCCTCTaGAACCTCTCTTTCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KPKPKCTSFQNTGPPNFLSSACL*NLSFSW Trigger: CCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGA...AAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR TCA 90 bp | AAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTTCCTTCATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPKPKCTSFQNTGPPNFLHQQCL*LHHVHG Trigger: ACCATGGACATGATGGAGTCACAGACACTGCTGATG...AAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTTCCTTGGTGGATTCATGCCATaGCCTTCTAGCATGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KPKPKCTSFQNTGPPNFLGGFMP*PSSMVD Trigger: GTCTACCATGCTAGAAGGGCATGGCATGAATCCACC...AAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | TATACATCTTTCCATATATATCTCAAACCCCTAGACTaGGGAGTTGTTCTCCTAACCTACGGAGCGGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTSFHIYLKPLD*GVVLLTYGAVR Trigger: CCTTACCGCTCCGTAGGTTAGGAGAACAACTCCCAAGTCTAGGGGTTTGAGATATATATGGAAAGATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | GTGGTGTGTGGGATTATTGCCATCTTCTTGTATCTGTaGAGACCTATTTTGTGCCGGATTTTATACCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VVCGIIAIFLYL*RPILCRILYPT Trigger: AGTTGGGTATAAAATCCGGCACAAAATAGGTCTCAACAGATACAAGAAGATGGCAATAATCCCACACACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | AGCTTGCATGTGTATGTGTGCTTTCCGTTGTTTTTGTaGGTATTTAAGACCAGTCTTAGTCGTGGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLHVYVCFPLFL*VFKTSLSRGDL Trigger: CAGATCACCACGACTAAGACTGGTCTTAAATACCAACAAAAACAACGGAAAGCACACATACACATGCAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | GCATTGAGTTTGATCATTTCCTGCCATGTAGTCCTCTaGGGTGTATTTGCTTCTTTTTGTTCTAGAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSLIISCHVVL*GVFASFCSRAF Trigger: GAAAGCTCTAGAACAAAAAGAAGCAAATACACCCAAGAGGACTACATGGCAGGAAATGATCAAACTCAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | CCTCTGGTTAGTCTGGCTAAGGGTTTATATATCTTGTaGATTTTCTCAAAGAACCAGCTCCTGGTTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVSLAKGLYIL*IFSKNQLLVLL Trigger: CAACAAAACCAGGAGCTGGTTCTTTGAGAAAATCAACAAGATATATAAACCCTTAGCCAGACTAACCAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | GGTAATTGCTCAAAACATATGTCTGAGCAAATGTTATaGGGACAGCACTCATTTTCCTCTATGCAATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GNCSKHMSEQML*GQHSFSSMQSC Trigger: ACATGATTGCATAGAGGAAAATGAGTGCTGTCCCAATAACATTTGCTCAGACATATGTTTTGAGCAATTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | GTAAAGTTTCTTTTATATATGTTGGTGCCCTTGCATTaGGAGCACAGATATTCAGAATTGAGTGTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKFLLYMLVPLH*EHRYSELSVPL Trigger: AAGAGGAACACTCAATTCTGAATATCTGTGCTCCAAATGCAAGGGCACCAACATATATAAAAGAAACTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| 3UTR CAA 72 bp | GCTTTAGTAAAGTTTCTTTTATATATGTTGGTGCCCTaGCATTTGGAGCACAGATATTCAGAATTGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVKFLLYMLVP*HLEHRYSELSV Trigger: AACACTCAATTCTGAATATCTGTGCTCCAAATGCAAGGGCACCAACATATATAAAAGAAACTTTACTAAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS CCA 90 bp | TGGCGCCGAAGCTCCAGTGCCTGCCTCTGCAACCTCTCTTTCTCATaGCACATGGCTGCCAAGTCTTTCTCTGCCCTCTCCTCCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRRSSSACLCNLSFS*HMAAKSFSALSSSR Trigger: TCTGCTGGAGGAGAGGGCAGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS GCA 90 bp | TTCTGCCGGAGAAGCAGCTGGCGCCGAAGCTCCAGTGCCTGCCTCTaGAACCTCTCTTTCTCATGGCACATGGCTGCCAAGTCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FCRRSSWRRSSSACL*NLSFSWHMAAKSFS Trigger: AGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGCCAGCTGCTTCTCCGGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS CCA 90 bp | GAAGCTCCAGTGCCTGCCTCTGCAACCTCTCTTTCTCATGGCACATaGCTGCCAAGTCTTTCTCTGCCCTCTCCTCCAGCAGAGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EAPVPASATSLSHGT*LPSLSLPSPPAEPG Trigger: ACCTGGCTCTGCTGGAGGAGAGGGCAGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS GCA 90 bp | CTCCAGTGCCTGCCTCTGCAACCTCTCTTTCTCATGGCACATGGCTaGCAAGTCTTTCTCTGCCCTCTCCTCCAGCAGAGCCAGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQCLPLQPLFLMAHG*QVFLCPLLQQSQVV Trigger: AACAACCTGGCTCTGCTGGAGGAGAGGGCAGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS CCA 90 bp | TGCCCTTCTAGCATGGTAGACTGCAGGTTGCCTGTCCCCATCACTTaGCTCTCTTCTCTGCTCCTAGGCACTGTGCTGGCTTTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPSSMVDCRLPVPIT*LSSLLLGTVLAFLP Trigger: GGGAAGGAAAGCCAGCACAGTGCCTAGGAGCAGAGAAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035960.13 |
||
| CDS-3UTR CAA 90 bp | AACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGGCCTGTCCCCATCACTaGGCTCTCTCTGCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: NPNPADGVAKTGVSSHLKACPHH*ALSAPR Trigger: CCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGGC...CTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGAGCCTGTCCCCATCACTaGGCTCTCTCTGCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRACPHH*ALSAPR Trigger: CCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGGC...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS GCA 90 bp | TCTAGGTCTGGTGGATTCATGCCATGCCCTTCTAGCATGGTAGACTaGAGGTTGCCTGTCCCCATCACTTGGCTCTCTCTGCTCCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSGGFMPCPSSMVD*RLPVPITWLSLLLG Trigger: GCCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAATCCACCAGACCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS CCA 90 bp | CAGACAGCAGGGTCATCAGCAGTGTCTGTGACTCCATCATGTCCATaGTCTCCTGCAGATCCGTCGATGGCAGAGAGGTCTAGGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QTAGSSAVSVTPSCP*SPADPSMAERSRSG Trigger: ACCAGACCTAGACCTCTCTGCCATCGACGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCCTGCTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS TCA 90 bp | GTTGTTCTCCATCTTCACAGACAGCAGGGTCATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGTCTCCTGCAGATCCGTCGATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVLHLHRQQGHQQCL*LHHVHGLLQIRRWQ Trigger: CTGCCATCGACGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCCTGCTGTCTGTGAAGATGGAGAACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS GCA 90 bp | TCTAGGTCTGGTGGATTCATGCCATGCCCTTCTAGCATGGTAGACTaGAGGTTGCCTGTCCCCATCACTTGGCTCTCTTCTCTGCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSGGFMPCPSSMVD*RLPVPITWLSSLLL Trigger: TAGGAGCAGAGAAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAATCCACCAGACCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035960.13 |
||
| CDS CCA 90 bp | CCCTGTCTGGCCAAGAAGCCTTCCTGGACAAGATTTTGTCGTCGATaGCAGAGAGGTCTAGGTCTGGTGGATTCATGCCATGCCCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PCLAKKPSWTRFCRR*QRGLGLVDSCHALL Trigger: TAGAAGGGCATGGCATGAATCCACCAGACCTAGACCTCTCTGCCATCGACGACAAAATCTTGTCCAGGAAGGCTTCTTGGCCAGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CAA 90 bp | ACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACTCCTTCCCTTTGTCTaGGGAACAGCACAAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TQTQQMVWPRLVFLPTSRLLPFV*GTAQAP Trigger: TGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGAG...TCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CAA 90 bp | CACCCTCTGCCTCTTCCCAGACTTCCTGGTTCATCAAAGCTGCTTCTTTACTGGCTCCTTCCCTTTGTCTaGGGAACAGCACAAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: HPLPLPRLPGSSKLLLYWLLPFV*GTAQAP Trigger: TGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGAG...CCAGTAAAGAAGCAGCTTTGATGAACCAGGAAGTCTGGGAAGAGGCAGAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
||
| CDS-3UTR CAA 90 bp | AGAACCCAAACCCAGCAGATGGTGTGGCCAAGACTGGTGTTTCTTCCCACCTCACACCACTCTTCTTCCTaGCACTCTCCTTCCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RTQTQQMVWPRLVFLPTSHHSSS*HSPSLC Trigger: ACAAAGGGAAGGAGAGTGCAAGGAAGAAGAGTGGTG...TGAGGTGGGAAGAAACACCAGTCTTGGCCACACCATCTGCTGGGTTTGGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS TCA 90 bp | GTTGTTCTCCATCTTCACAGACAGCAGGGTCATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGTCTCCTGCAGATCCCGTCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVLHLHRQQGHQQCL*LHHVHGLLQIPSFL Trigger: AAGAAAAGACGGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCCTGCTGTCTGTGAAGATGGAGAACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CAA 90 bp | CTGGACCACCAAACTTCCTTCGGTCCACAAGGAGGAGGCATGAGGAAACATAAATGCTTTCTTGTCATATaGCAGATACCGGGACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LDHQTSFGPQGGGMRKHKCFLVI*QIPGLH Trigger: GTGGAGTCCCGGTATCTGCAATATGACAAGAAAGCA...TTTATGTTTCCTCATGCCTCCTCCTTGTGGACCGAAGGAAGTTTGGTGGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCAAGACTGGTGTTTCTTCCCACCTCAAGACAAAAACCAAAGCAAACCACACCACTCTTCTTCCTaGCACTCTCCTTCCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CGQDWCFFPPQDKNQSKPHHSSS*HSPSLC Trigger: ACAAAGGGAAGGAGAGTGCAAGGAAGAAGAGTGGTG...TGGTTTGCTTTGGTTTTTGTCTTGAGGTGGGAAGAAACACCAGTCTTGGCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS CCA 90 bp | GCTGATAAAAGATGTGGACTTAGCTTTGTCTGTCATTTCCCTGTCTaGCCAAGAAGCCTTCCTGGACAAGATTTTGTCGTCGATGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ADKRCGLSFVCHFPV*PRSLPGQDFVVDGR Trigger: TCTGCCATCGACGACAAAATCTTGTCCAGGAAGGCTTCTTGGCCAGACAGGGAAATGACAGACAAAGCTAAGTCCACATCTTTTATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
||
| CDS-3UTR CAA 90 bp | CTTGCTTTCTTTACTCAGTTTAGAACCCAAACCCAGCAGATGGTGTGGCCAAGATGCTTTCTTGTCATATaGCAGATACCGGGACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAFFTQFRTQTQQMVWPRCFLVI*QIPGLH Trigger: GTGGAGTCCCGGTATCTGCAATATGACAAGAAAGCA...TCTTGGCCACACCATCTGCTGGGTTTGGGTTCTAAACTGAGTAAAGAAAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
||
| CDS-3UTR CAA 90 bp | AACATAAATGAGCAGAAAGGCCAGCTAGGAAATACTCAGGTAGGACAGGCTGCCGATGTGGACTTAGCTTaGTCTGTCATTTCCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: NINEQKGQLGNTQVGQAADVDLA*SVISLS Trigger: AGACAGGGAAATGACAGACAAAGCTAAGTCCACATC...GGCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTCTGCTCATTTATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS-3UTR CAA 90 bp | AAACCAAAACCAAAGTGCACAAGCTTTCAGAATACTGGACCACCAAACTTCCTTCTCCTTCCCTTTGTCTaGGGAACAGCACAAGCACCA | + |
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Preference number: 5 (lower is better) Translates to: KPKPKCTSFQNTGPPNFLLLPFV*GTAQAP Trigger: TGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGAG...AAGGAAGTTTGGTGGTCCAGTATTCTGAAAGCTTGTGCACTTTGGTTTTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS GCA 72 bp | TGCCGGAGAAGCAGCTGGCGCCGAAGCTCCAGTGCCTaGCTCTGCAACCTCTCTTTCTCATGGCACATGGCT | + |
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Preference number: 6 (lower is better) Translates to: CRRSSWRRSSSA*LCNLSFSWHMA Trigger: AGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGCCAGCTGCTTCTCCGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS GCA 72 bp | AGAAGCAGCTGGCGCCGAAGCTCCAGTGCCTGCCTCTaGAACCTCTCTTTCTCATGGCACATGGCTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSSWRRSSSACL*NLSFSWHMAAK Trigger: CTTGGCAGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAGGCACTGGAGCTTCGGCGCCAGCTGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS GCA 72 bp | CTGCCTCTGCAACCTCTCTTTCTCATGGCACATGGCTaGCAAGTCTTTCTCTGCCCTCTCCTCCAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LPLQPLFLMAHG*QVFLCPLLQQS Trigger: GCTCTGCTGGAGGAGAGGGCAGAGAAAGACTTGGCAGCCATGTGCCATGAGAAAGAGAGGTTGCAGAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS CCA 72 bp | AGCATGGTAGACTGCAGGTTGCCTGTCCCCATCACTTaGCTCTCTTCTCTGCTCCTAGGCACTGTGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SMVDCRLPVPIT*LSSLLLGTVLA Trigger: AGCCAGCACAGTGCCTAGGAGCAGAGAAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035960.13 |
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| CDS CCA 72 bp | AGCATGGTAGACTGCAGGTTGCCTGTCCCCATCACTTaGCTCTCTCTGCTCCTAGGCACTGTGCTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SMVDCRLPVPIT*LSLLLGTVLAF Trigger: GAAAGCCAGCACAGTGCCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS CAA 90 bp | TCTGGTGGATTCATGCCATGCCCTTCTAGCATGGTAGACTGCAGGTaGCCTGTCCCCATCACTTGGCTCTCTCTGCTCCTAGGCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: SGGFMPCPSSMVDCR*PVPITWLSLLLGTV Trigger: CACAGTGCCTAGGAGCAGAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAATCCACCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS CCA 72 bp | GGGTCATCAGCAGTGTCTGTGACTCCATCATGTCCATaGTCTCCTGCAGATCCGTCGATGGCAGAGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSAVSVTPSCP*SPADPSMAERS Trigger: AGACCTCTCTGCCATCGACGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| CDS CAA 90 bp | TCTGGTGGATTCATGCCATGCCCTTCTAGCATGGTAGACTGCAGGTaGCCTGTCCCCATCACTTGGCTCTCTTCTCTGCTCCTAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: SGGFMPCPSSMVDCR*PVPITWLSSLLLGT Trigger: AGTGCCTAGGAGCAGAGAAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAATCCACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035960.13 |
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| CDS CAA 90 bp | ATGGCTGCCAAGTCTTTCTCTGCCCTCTCCTCCAGCAGAGCCAGGTaGTTCTCCATCTTCACAGACAGCAGGGTCATCAGCAGTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: MAAKSFSALSSSRAR*FSIFTDSRVISSVC Trigger: ACAGACACTGCTGATGACCCTGCTGTCTGTGAAGATGGAGAACAACCTGGCTCTGCTGGAGGAGAGGGCAGAGAAAGACTTGGCAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS TCA 72 bp | CATCTTCACAGACAGCAGGGTCATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGTCTCCTGCAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: HLHRQQGHQQCL*LHHVHGLLQIP Trigger: CGGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCCTGCTGTCTGTGAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS GCA 72 bp | ATGGCAGAGAGGTCTAGGTCTGGTGGATTCATGCCATaGCCTTCTAGCATGGTAGACTGCAGGTTGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: MAERSRSGGFMP*PSSMVDCRLPV Trigger: GACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAATCCACCAGACCTAGACCTCTCTGCCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS CCA 72 bp | GCTCCTAGGCACTGTGCTGGCTTTCCTTCCCTCAGGTaGCTTCTCTTCTTTGGCCGCTCCAGAAACCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: APRHCAGFPSLR*LLFFGRSRNLF Trigger: AAAAAGGTTTCTGGAGCGGCCAAAGAAGAGAAGCCACCTGAGGGAAGGAAAGCCAGCACAGTGCCTAGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS CAA 72 bp | TTCATGCCATGCCCTTCTAGCATGGTAGACTGCAGGTaGCCTGTCCCCATCACTTGGCTCTCTTCTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FMPCPSSMVDCR*PVPITWLSSLL Trigger: GAGCAGAGAAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035960.13 |
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| CDS CAA 72 bp | TCCCTGTCTGGCCAAGAAGCCTTCCTGGACAAGATTTaGTCGTCGATGGCAGAGAGGTCTAGGTCTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLSGQEAFLDKI*SSMAERSRSGG Trigger: TCCACCAGACCTAGACCTCTCTGCCATCGACGACAAAATCTTGTCCAGGAAGGCTTCTTGGCCAGACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS CAA 72 bp | TTCATGCCATGCCCTTCTAGCATGGTAGACTGCAGGTaGCCTGTCCCCATCACTTGGCTCTCTCTGCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: FMPCPSSMVDCR*PVPITWLSLLL Trigger: TAGGAGCAGAGAGAGCCAAGTGATGGGGACAGGCAACCTGCAGTCTACCATGCTAGAAGGGCATGGCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110071.3 ENSMUST00000123495.8 |
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| CDS TCA 72 bp | CATCTTCACAGACAGCAGGGTCATCAGCAGTGTCTGTaGCTCCATCATGTCCATGGTCTCCTGCAGATCCGT | + |
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Preference number: 6 (lower is better) Translates to: HLHRQQGHQQCL*LHHVHGLLQIR Trigger: ACGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCCTGCTGTCTGTGAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123495.8 |
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| CDS CCA 72 bp | GGGTCATCAGCAGTGTCTGTGACTCCATCATGTCCATaGTCTCCTGCAGATCCCGTCTTTTCTTCCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSSAVSVTPSCP*SPADPVFSSEG Trigger: TCCTTCGGAAGAAAAGACGGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCTGATGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS CCA 72 bp | TGTCTGTCATTTCCCTGTCTGGCCAAGAAGCCTTCCTaGACAAGATTTTGTCGTCGATGGCAGAGAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: CLSFPCLAKKPS*TRFCRRWQRGL Trigger: TAGACCTCTCTGCCATCGACGACAAAATCTTGTCCAGGAAGGCTTCTTGGCCAGACAGGGAAATGACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS GCA 72 bp | AGCAGTGTCTGTGACTCCATCATGTCCATGGTCTCCTaGAGATCCCGTCTTTTCTTCCGAAGGATTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSVCDSIMSMVS*RSRLFFRRILF Trigger: AAAAAGAATCCTTCGGAAGAAAAGACGGGATCTGCAGGAGACCATGGACATGATGGAGTCACAGACACTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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| CDS CAA 72 bp | TTTTTGTCACAGCTGATAAAAGATGTGGACTTAGCTTaGTCTGTCATTTCCCTGTCTGGCCAAGAAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLSQLIKDVDLA*SVISLSGQEAF Trigger: GAAGGCTTCTTGGCCAGACAGGGAAATGACAGACAAAGCTAAGTCCACATCTTTTATCAGCTGTGACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035960.13 ENSMUST00000110071.3 |
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