Pregenerated sensors for HAUS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038047Ensembl transcript IDs: ENSMUST00000070607.9, ENSMUST00000125481.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTaGACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: DSKGFPSTPEQSLLC*THKGTQSPRDHVLF Trigger: AAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGTGCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 90 bp | GTAAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTaGTCTGCTGCACTCATAAAGGAACCCAGAGCCCTCGGGACCATG | + |
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Preference number: 1 (lower is better) Translates to: VKKTAKDFPVHLSSP*SAALIKEPRALGTM Trigger: CATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGTGCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 90 bp | TCCCTGCATCCTACTCCAGCCACTTCATCTCTTAGCTTCTGTATCTaGAGGCTAGGTATGCCTCCTATCTCAATTACAAAGGTTAAATGC | + |
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Preference number: 1 (lower is better) Translates to: SLHPTPATSSLSFCI*RLGMPPISITKVKC Trigger: GCATTTAACCTTTGTAATTGAGATAGGAGGCATACCTAGCCTGCAGATACAGAAGCTAAGAGATGAAGTGGCTGGAGTAGGATGCAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 90 bp | GACTTCTTTCCGTCCCTCTGTCAAGCAGCTTTTAGACAGTCCTTCTaGCAACTCAGGCCATCTACCTTTCTCTTCTCTCATTTTCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: DFFPSLCQAAFRQSF*QLRPSTFLFSHFLK Trigger: CTTAAGAAAATGAGAGAAGAGAAAGGTAGATGGCCTGAGTTGTCAGAAGGACTGTCTAAAAGCTGCTTGACAGAGGGACGGAAAGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 90 bp | ATGCCTCCTATCTCAATTACAAAGGTTAAATGCAATCATGCATATTaGACACTTAGCCCTGCTCTGGCTCCCCTGATAGTCCTTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: MPPISITKVKCNHAY*TLSPALAPLIVLPL Trigger: AAGAGGAAGGACTATCAGGGGAGCCAGAGCAGGGCTAAGTGTTCAATATGCATGATTGCATTTAACCTTTGTAATTGAGATAGGAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR CCA 90 bp | CAACTCAGGCCATCTACCTTTCTCTTCTCTCATTTTCTTAAGGCTTaGGAACAAGATTTTGATAGTTACACACTGAGGCTCTTCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: QLRPSTFLFSHFLKA*EQDFDSYTLRLFTD Trigger: GTCTGTGAAGAGCCTCAGTGTGTAACTATCAAAATCTTGTTCCCAAGCCTTAAGAAAATGAGAGAAGAGAAAGGTAGATGGCCTGAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGAGATACCCCAGTGGCTaGTCATCCTGTGACCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GCPGTDCRLDSDLPASPRRYPSG*SSCDPG Trigger: TCCTGGGTCACAGGATGAGCAGCCACTGGGGTATCT...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTCTCAGAGGATCTGACTCCCTCCTCAGGGAGCACCAGGCACCAAAGAGGAAGCCAAGTACATTCTaGACTCCTTTGATGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: TSLRGSDSLLREHQAPKRKPSTF*TPLMLT Trigger: TGTCAGCATCAAAGGAGTTCAGAATGTACTTGGCTT...CCTCTTTGGTGCCTGGTGCTCCCTGAGGAGGGAGTCAGATCCTCTGAGACTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGGGTACACAGACATGTTaGCAAACATCCACACACATG | + |
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Preference number: 2 (lower is better) Translates to: GCPGTDCRLDSDLPASPRGTQTC*QTSTHM Trigger: CATGTGTGTGGATGTTTGCCAACATGTCTGTGTACC...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGCCATCAACATCACTCTaGAGGACCAATAGACTTAGA | + |
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Preference number: 2 (lower is better) Translates to: GCPGTDCRLDSDLPASPRPSTSL*RTNRLR Trigger: TCTAAGTCTATTGGTCCTGCAGAGTGATGTTGATGG...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGACAATGAACCATCAATaGGCTTTTAAGCAAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GCPGTDCRLDSDLPASPRTMNHQ*AFKQGP Trigger: AGGCCCTTGCTTAAAAGCCCATTGATGGTTCATTGT...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGATGTATGATATCAGCTaGAGTTCAGTGACAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: GCPGTDCRLDSDLPASPRMYDIS*SSVTRL Trigger: AAGTCTTGTCACTGAACTGCAGCTGATATCATACAT...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATAATTTCCCAGTACACCTaGGCAGTCCCTGCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VHGTETGNDHFRNAQPTIISQYT*AVPALL Trigger: CAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAAT...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATACACCTGAGCAGTCCCTaGTCTGCTGCACTCATAAAG | + |
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Preference number: 2 (lower is better) Translates to: VHGTETGNDHFRNAQPTIHLSSP*SAALIK Trigger: CTTTATGAGTGCAGCAGAGCAGGGACTGCTCAGGTG...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR GCA 90 bp | TCACCAACCACATGCATTTTATCCCATCAACATCACTCTGCAGGACCAATAGACAGACTTCAGGGTAAGTaGATCACAGCTAAATCAACT | + |
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Preference number: 2 (lower is better) Translates to: SPTTCILSHQHHSAGPIDRLQGK*ITAKST Trigger: AGTTGATTTAGCTGTGATGCACTTACCCTGAAGTCT...GTCTATTGGTCCTGCAGAGTGATGTTGATGGGATAAAATGCATGTGGTTGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATATGCAATCATGCATATTaGACACTTAGCCCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VHGTETGNDHFRNAQPTICNHAY*TLSPAL Trigger: CAGAGCAGGGCTAAGTGTTCAATATGCATGATTGCA...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATACCATGGAAGCGTATTTaGAATGAGATTTCTAGATCC | + |
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Preference number: 2 (lower is better) Translates to: VHGTETGNDHFRNAQPTIPWKRI*NEISRS Trigger: GGATCTAGAAATCTCATTTCAAATACGCTTCCATGG...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR CAA 90 bp | GACTTAGAATTCATTAAGCCTGCTTACAATCTAAGGTGTGCTGCTTaGACTAAATATCCATCCAAAGGTAAAGGTACTACACTTTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: DLEFIKPAYNLRCAA*TKYPSKGKGTTLCV Trigger: AACACAAAGTGTAGTACCTTTACCTTTGGATGGATATTTAGTCAAAGCAGCACACCTTAGATTGTAAGCAGGCTTAATGAATTCTAAGTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | GGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTaGACTCATAAAGGAACCCAGAGCCCTCGGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: GFPSTPEQSLLC*THKGTQSPRDH Trigger: ATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGTGCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | AAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTaGTGCACTCATAAAGGAACCCAGAGCCCTCGGGAC | + |
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Preference number: 3 (lower is better) Translates to: KGFPSTPEQSLL*CTHKGTQSPRD Trigger: GTCCCGAGGGCTCTGGGTTCCTTTATGAGTGCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | ACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTaGTCTGCTGCACTCATAAAGGAACCCAGAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: TAKDFPVHLSSP*SAALIKEPRAL Trigger: GAGGGCTCTGGGTTCCTTTATGAGTGCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | AGGAACTATAGCTGGCTGAAGAGATACCCCAGTGGCTaGTCATCCTGTGACCCAGGATCAAGTCCTAGCACC | + |
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Preference number: 3 (lower is better) Translates to: RNYSWLKRYPSG*SSCDPGSSPST Trigger: GGTGCTAGGACTTGATCCTGGGTCACAGGATGAGCAGCCACTGGGGTATCTCTTCAGCCAGCTATAGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | TTCAGTCTTGTCTTTGCAGACAGGGCCTCACTATGTTaGACTGGCTGTCCTGGAACTGACTGTAGACTAGAC | + |
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Preference number: 3 (lower is better) Translates to: FSLVFADRASLC*TGCPGTDCRLD Trigger: GTCTAGTCTACAGTCAGTTCCAGGACAGCCAGTGCAACATAGTGAGGCCCTGTCTGCAAAGACAAGACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 72 bp | CCGTCCCTCTGTCAAGCAGCTTTTAGACAGTCCTTCTaGCAACTCAGGCCATCTACCTTTCTCTTCTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: PSLCQAAFRQSF*QLRPSTFLFSH Trigger: ATGAGAGAAGAGAAAGGTAGATGGCCTGAGTTGTCAGAAGGACTGTCTAAAAGCTGCTTGACAGAGGGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 72 bp | AGTGCTGCTGTGAATTTTAAAGGAACTATAGCTGGCTaGAGAGATACCCCAGTGGCTGCTCATCCTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: SAAVNFKGTIAG*RDTPVAAHPVT Trigger: GGTCACAGGATGAGCAGCCACTGGGGTATCTCTTCAGCCAGCTATAGTTCCTTTAAAATTCACAGCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | ACAGGCATCTCAGATGATCCTAATACAGTTGGTCCCTaGATCCTACTCCAGCCACTTCATCTCTTAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TGISDDPNTVGP*ILLQPLHLLAS Trigger: AGAAGCTAAGAGATGAAGTGGCTGGAGTAGGATGCAGGGACCAACTGTATTAGGATCATCTGAGATGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR GCA 72 bp | CCTACTCCAGCCACTTCATCTCTTAGCTTCTGTATCTaGAGGCTAGGTATGCCTCCTATCTCAATTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: PTPATSSLSFCI*RLGMPPISITK Trigger: CTTTGTAATTGAGATAGGAGGCATACCTAGCCTGCAGATACAGAAGCTAAGAGATGAAGTGGCTGGAGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR CCA 72 bp | CACTTTTCATGCTCAGCACCAAGGTGTGTATACAGCTaGATCAGAAATCACATAAAGTCGGGGGAGATGTCT | + |
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Preference number: 3 (lower is better) Translates to: HFSCSAPRCVYS*IRNHIKSGEMS Trigger: AGACATCTCCCCCGACTTTATGTGATTTCTGATCCAGCTGTATACACACCTTGGTGCTGAGCATGAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR-3UTR CAA 90 bp | GTAGAAAATGTCATTTGTCTGAACCTTCAGTCTTGTCTTTGCAGACAGGGCCTCCTAAGGTGTGCTGCTTaGACTAAATATCCATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: VENVICLNLQSCLCRQGLLRCAA*TKYPSK Trigger: TTTGGATGGATATTTAGTCAAAGCAGCACACCTTAG...GAGGCCCTGTCTGCAAAGACAAGACTGAAGGTTCAGACAAATGACATTTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 72 bp | CCTTTGATGCTGACAAAAGAATTCACTTCCAATGTATaGTATCAGCTGCAGTTCAGTGACAAGACTTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: PLMLTKEFTSNV*YQLQFSDKTSG Trigger: CCCTGAAGTCTTGTCACTGAACTGCAGCTGATATCATACATTGGAAGTGAATTCTTTTGTCAGCATCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 72 bp | ATTCACTTCCAATGTATGATATCAGCTGCAGTTCAGTaGCAAGACTTCAGGGTAAGTGCATCACAGCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: IHFQCMISAAVQ*QDFRVSASQLN Trigger: ATTTAGCTGTGATGCACTTACCCTGAAGTCTTGTCACTGAACTGCAGCTGATATCATACATTGGAAGTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 72 bp | AAAGACCTAAACACTTATAAGAAGCCAAGTACATTCTaGACTCCTTTGATGCTGACAAAAGAATTCACTTCC | + |
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Preference number: 3 (lower is better) Translates to: KDLNTYKKPSTF*TPLMLTKEFTS Trigger: GGAAGTGAATTCTTTTGTCAGCATCAAAGGAGTTCAGAATGTACTTGGCTTCTTATAAGTGTTTAGGTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR TCA 72 bp | ACACTAAGTTATAATCAGTTTTGGAGAAGTGAGAGTTaGGATTTGTTCATGGTACTGAAACAGGAAATGATC | + |
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Preference number: 3 (lower is better) Translates to: TLSYNQFWRSES*DLFMVLKQEMI Trigger: GATCATTTCCTGTTTCAGTACCATGAACAAATCTCAACTCTCACTTCTCCAAAACTGATTATAACTTAGTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGATATTCTCTCCAAGGTaGGCGTGCGGCACCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: GCPGTDCRLDSDLPASPRIFSPR*ACGTIF Trigger: GAAGATGGTGCCGCACGCGCACCTTGGAGAGAATAT...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | ACCAGTCTCAGAGGATCTGACTCCCTCCTCAGGGAGCACCAGGCACCAAAGAGGGAGGCCAGCAATCTCTaGAAACTTCTTTGGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TSLRGSDSLLREHQAPKREASNL*KLLWQE Trigger: CTCTTGCCAAAGAAGTTTTCAGAGATTGCTGGCCTC...CCTCTTTGGTGCCTGGTGCTCCCTGAGGAGGGAGTCAGATCCTCTGAGACTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | ACCAGTCTCAGAGGATCTGACTCCCTCCTCAGGGAGCACCAGGCACCAAAGAGGCCTTTCCACTTCATATaGCACTTTCCCTCCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TSLRGSDSLLREHQAPKRPFHFI*HFPSLS Trigger: TGACAAGGAGGGAAAGTGGCATATGAAGTGGAAAGG...CCTCTTTGGTGCCTGGTGCTCCCTGAGGAGGGAGTCAGATCCTCTGAGACTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCGAGTGTCTCATTCACTaGAGCCCACAAGGACCGAAC | + |
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Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCECLIH*SPQGPN Trigger: GTTCGGTCCTTGTGGGCTTCAGTGAATGAGACACTC...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | ACCAGTCTCAGAGGATCTGACTCCCTCCTCAGGGAGCACCAGGCACCAAAGAGGTCAATAAACAAATCCTaGGTGTCCCAAACAGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TSLRGSDSLLREHQAPKRSINKS*VSQTVC Trigger: ACACACTGTTTGGGACACTCAGGATTTGTTTATTGA...CCTCTTTGGTGCCTGGTGCTCCCTGAGGAGGGAGTCAGATCCTCTGAGACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCTCTACCAGACGGGCTTaGTCTTTCTGGAATGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCSTRRA*SFWNGS Trigger: TGAGCCATTCCAGAAAGAGCAAGCCCGTCTGGTAGA...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCTGTGCATCATCTGCTTaGACAGCTTTGGCTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCCASSA*TALATG Trigger: CCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACA...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGGTCCCAAACAGTGTGTaGATCATCTGCTTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: THKGTQSPRDHVLFALMKVPNSV*IICLHS Trigger: GCTGTGCAAGCAGATGATGCACACACTGTTTGGGAC...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | ACCAGTCTCAGAGGATCTGACTCCCTCCTCAGGGAGCACCAGGCACCAAAGAGGAAGGACCGAACCTTTTaGATCTTCTCTTGTGTATTA | + |
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Preference number: 4 (lower is better) Translates to: TSLRGSDSLLREHQAPKRKDRTF*IFSCVL Trigger: TAATACACAAGAGAAGATTCAAAAGGTTCGGTCCTT...CCTCTTTGGTGCCTGGTGCTCCCTGAGGAGGGAGTCAGATCCTCTGAGACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGCATGTGACTAGTTTCTaGAAGCCTGGTGGTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: THKGTQSPRDHVLFALMKHVTSF*KPGGCT Trigger: TGTGCAACCACCAGGCTTTCAGAAACTAGTCACATG...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | ACCAGTCTCAGAGGATCTGACTCCCTCCTCAGGGAGCACCAGGCACCAAAGAGGGTGGTCTTCAATTTTTaGTCCACCAGAAAAGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: TSLRGSDSLLREHQAPKRVVFNF*STRKAL Trigger: TAAAGCTTTTCTGGTGGAGCAAAAATTGAAGACCAC...CCTCTTTGGTGCCTGGTGCTCCCTGAGGAGGGAGTCAGATCCTCTGAGACTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCACCTTTAAGCTGATCTaGGACAGCTTTCTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCTFKLI*DSFLFR Trigger: CCTGAAGAGAAAGCTGTCTCAGATCAGCTTAAAGGT...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCATCACACACACTTCCTaGGGTATCCACTTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCITHTS*GIHFSS Trigger: AGAAGAGAAGTGGATACCCCAGGAAGTGTGTGTGAT...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCCCTTCTCAAGGAGTGTaGAACTGTTTGTATCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCPSQGV*NCLYLR Trigger: CCTCAGATACAAACAGTTCCACACTCCTTGAGAAGG...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGTCAAGGTTTTCTCTATaGGAGTCCTCATATTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GCPGTDCRLDSDLPASPRSRFSL*ESSYLD Trigger: ATCCAAATATGAGGACTCCCATAGAGAAAACCTTGA...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGTTTCTGAAAGCCTGGTaGTTGCACATTCTAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCPGTDCRLDSDLPASPRFLKAW*LHILNL Trigger: AAGATTTAGAATGTGCAACCACCAGGCTTTCAGAAA...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGTGCATATACTTCCTCTaGCACAGGATCAAACGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: THKGTQSPRDHVLFALMKCIYFL*HRIKRK Trigger: CTTACGTTTGATCCTGTGTCAGAGGAAGTATATGCA...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCGAGAATACATCCATGTaGCTAGTTTCTGAAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCENTSM*LVSESL Trigger: CAGGCTTTCAGAAACTAGTCACATGGATGTATTCTC...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGTCCATGTCAAGTTTTTaGTCAAATGGAGGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: THKGTQSPRDHVLFALMKSMSSF*SNGGQQ Trigger: TTGCTGGCCTCCATTTGACCAAAAACTTGACATGGA...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | TCACCAACCACATGCATTTTATCCCATCAACATCACTCTGCAGGACCAATAGACCGGGCTTGCTCTTTCTaGAATGGCTCACTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTTCILSHQHHSAGPIDRACSF*NGSLLF Trigger: GAAGAGGAGTGAGCCATTCCAGAAAGAGCAAGCCCG...GTCTATTGGTCCTGCAGAGTGATGTTGATGGGATAAAATGCATGTGGTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | TCACCAACCACATGCATTTTATCCCATCAACATCACTCTGCAGGACCAATAGACCTGTTACGTGCTACATaGCTTCTGGCAAGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPTTCILSHQHHSAGPIDLLRAT*LLARHL Trigger: CAAGTGCCTTGCCAGAAGCCATGTAGCACGTAACAG...GTCTATTGGTCCTGCAGAGTGATGTTGATGGGATAAAATGCATGTGGTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | GTAGAAAATGTCATTTGTCTGAACCTTCAGTCTTGTCTTTGCAGACAGGGCCTCAGTGTGTGCATCATCTaGTTGCACAGCTTTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VENVICLNLQSCLCRQGLSVCII*LHSFGY Trigger: GTAGCCAAAGCTGTGCAAGCAGATGATGCACACACT...GAGGCCCTGTCTGCAAAGACAAGACTGAAGGTTCAGACAAATGACATTTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | ATCAGCTGCAGTTCAGTGACAAGACTTCAGGGTAAGTGCATCACAGCTAAATCACCGGCAGAGTCCCTCTaGAAACACTACTTTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSSVTRLQGKCITAKSPAESL*KHYFVN Trigger: ATTCACAAAGTAGTGTTTCCAGAGGGACTCTGCCGG...TGATTTAGCTGTGATGCACTTACCCTGAAGTCTTGTCACTGAACTGCAGCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR GCA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCTTCCTCTTCAGAGTCTaGTATTGTCTTATATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCFLFRV*YCLICQ Trigger: TTGACATATAAGACAATAGCAGACTCTGAAGAGGAA...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGTCCATTCTTTTAATTTaGTTCTGTAGACTCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: THKGTQSPRDHVLFALMKSILLI*FCRLMH Trigger: GTGCATGAGTCTACAGAACCAAATTAAAAGAATGGA...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | ATCAGCTGCAGTTCAGTGACAAGACTTCAGGGTAAGTGCATCACAGCTAAATCAGGGAGTCCTCATATTTaGATCCTTCTCAAGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSSVTRLQGKCITAKSGSPHI*ILLKEC Trigger: ACACTCCTTGAGAAGGATCCAAATATGAGGACTCCC...TGATTTAGCTGTGATGCACTTACCCTGAAGTCTTGTCACTGAACTGCAGCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | ATCAGCTGCAGTTCAGTGACAAGACTTCAGGGTAAGTGCATCACAGCTAAATCAAGGAGACATAAGCAATaGGCCAACAACTTGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISCSSVTRLQGKCITAKSRRHKQ*ANNLRK Trigger: TTTCCTCAAGTTGTTGGCTCATTGCTTATGTCTCCT...TGATTTAGCTGTGATGCACTTACCCTGAAGTCTTGTCACTGAACTGCAGCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | ATCAGCTGCAGTTCAGTGACAAGACTTCAGGGTAAGTGCATCACAGCTAAATCACCATCCAAAGCATACTaGTTGACAAAGCCAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSSVTRLQGKCITAKSPSKAY*LTKPKS Trigger: ACTCTTTGGCTTTGTCAACCAGTATGCTTTGGATGG...TGATTTAGCTGTGATGCACTTACCCTGAAGTCTTGTCACTGAACTGCAGCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATATTGCTCTTTCTGGAATaGCTCACTCCTCTTCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHGTETGNDHFRNAQPTILLFLE*LTPLHR Trigger: CCGGTGAAGAGGAGTGAGCCATTCCAGAAAGAGCAA...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR CAA 72 bp | ATTTTTAAACAGGCATCTCAGATGATCCTAATACAGTaGGTCCCTGCATCCTACTCCAGCCACTTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IFKQASQMILIQ*VPASYSSHFIS Trigger: AGAGATGAAGTGGCTGGAGTAGGATGCAGGGACCAACTGTATTAGGATCATCTGAGATGCCTGTTTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| 3UTR CAA 72 bp | GAGGGCAAACTAAGACATCAAGGTAGAAAATGTCATTaGTCTGAACCTTCAGTCTTGTCTTTGCAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGKLRHQGRKCH*SEPSVLSLQTG Trigger: CCCTGTCTGCAAAGACAAGACTGAAGGTTCAGACAAATGACATTTTCTACCTTGATGTCTTAGTTTGCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR TCA 90 bp | CACTCTGCAGGACCAATAGACTTAGAATTCATTAAGCCTGCTTACAATCTAAGGCTTATTTACCAAGTCTaGCACATCTTCTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPIDLEFIKPAYNLRLIYQV*HIFCWG Trigger: CCCCCAACAGAAGATGTGTCAGACTTGGTAAATAAG...CCTTAGATTGTAAGCAGGCTTAATGAATTCTAAGTCTATTGGTCCTGCAGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATATGTTTTTCCATCAAGTaGCACGAGGGAAGATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHGTETGNDHFRNAQPTICFSIK*HEGRWL Trigger: AAGCCATCTTCCCTCGTGCCACTTGATGGAAAAACA...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
||
| CDS-3UTR GCA 90 bp | TCACCAACCACATGCATTTTATCCCATCAACATCACTCTGCAGGACCAATAGACCTTGCATTTCGTACTTaGTTAACAGACAGATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SPTTCILSHQHHSAGPIDLAFRT*LTDRFT Trigger: TGTAAATCTGTCTGTTAAGCAAGTACGAAATGCAAG...GTCTATTGGTCCTGCAGAGTGATGTTGATGGGATAAAATGCATGTGGTTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | CACTCTGCAGGACCAATAGACTTAGAATTCATTAAGCCTGCTTACAATCTAAGGACAGAGTTTTATGTGTaGAAGGCTCAATGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSAGPIDLEFIKPAYNLRTEFYV*KAQCKK Trigger: CTTCTTGCATTGAGCCTTCCACACATAAAACTCTGT...CCTTAGATTGTAAGCAGGCTTAATGAATTCTAAGTCTATTGGTCCTGCAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CCA 90 bp | GTAGAAAATGTCATTTGTCTGAACCTTCAGTCTTGTCTTTGCAGACAGGGCCTCGTGCACATAACTCTTTaGTTCCAGATTAAAACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VENVICLNLQSCLCRQGLVHITL*FQIKTS Trigger: ACTAGTTTTAATCTGGAACCAAAGAGTTATGTGCAC...GAGGCCCTGTCTGCAAAGACAAGACTGAAGGTTCAGACAAATGACATTTTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 90 bp | ATGTCAAGTTTTTGGTCAAATGGAGGCCAGCAATCTTCTCCAAGGTaGGCGTGCGGCACCATCTTCCCGCCGAACGTGATGCTGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MSSFWSNGGQQSSPR*ACGTIFPPNVMLEL Trigger: GAGCTCCAGCATCACGTTCGGCGGGAAGATGGTGCCGCACGCGCACCTTGGAGAAGATTGCTGGCCTCCATTTGACCAAAAACTTGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125481.3 |
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| CDS GCA 90 bp | GAATCAGACAGAACTACTCTGGCAACCTCATCTACCAGACGGGCTTaGTCTTTCTGGAATGGCTCACTCCTCTTCACCGGCAGAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESDRTTLATSSTRRA*SFWNGSLLFTGRVP Trigger: AGGGACTCTGCCGGTGAAGAGGAGTGAGCCATTCCAGAAAGAGCAAGCCCGTCTGGTAGATGAGGTTGCCAGAGTAGTTCTGTCTGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | GGCTGTCCTGGAACTGACTGTAGACTAGACTCAGATCTGCCTGCCTCCCCAAGGGGTAGTGGAGATTTATaGTCAATCCTGCTTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCPGTDCRLDSDLPASPRGSGDL*SILLGQ Trigger: CTGGCCAAGCAGGATTGACAATAAATCTCCACTACC...CCTTGGGGAGGCAGGCAGATCTGAGTCTAGTCTACAGTCAGTTCCAGGACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGATCTACCAGACGGGCTaGCTCTTTCTGGAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: THKGTQSPRDHVLFALMKIYQTG*LFLEWL Trigger: GAGCCATTCCAGAAAGAGCAAGCCCGTCTGGTAGAT...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCTCTGCTTGCACAGCTTaGGCTACAGGGCTCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCSACTA*ATGLSS Trigger: AGAACTGAGCCCTGTAGCCAAAGCTGTGCAAGCAGA...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCCTGAAAGCCTGGTGGTaGCACATTCTAAATCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCLKAWW*HILNLA Trigger: AGCAAGATTTAGAATGTGCAACCACCAGGCTTTCAG...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAGACAGCAAAGGATTTCCCAGTACACCTGAGCAGTCCCTGCTCTGCTGCGGGCTCAGTTCTACTTaGTGTTGTTCAAGTGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KEDSKGFPSTPEQSLLCCGLSST*CCSSVL Trigger: CAAGACACTTGAACAACACAAAGTAGAACTGAGCCC...GCAGCAGAGCAGGGACTGCTCAGGTGTACTGGGAAATCCTTTGCTGTCTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 90 bp | CTTTGCGTAGTCAATAAACAAATCCTGAGTGTCCCAAACAGTGTGTaGATCATCTGCTTGCACAGCTTTGGCTACAGGGCTCAGTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LCVVNKQILSVPNSV*IICLHSFGYRAQFY Trigger: GTAGAACTGAGCCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACACACTGTTTGGGACACTCAGGATTTGTTTATTGACTACGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 90 bp | AACAGAGTTTTATGTGTGGAAGGCTCAATGCAAGAAGCTTGTGAGTaGTCCGGCGGTACTGGAACACAGTCCTCTTTACTTCTACTCATC | + |
|
Preference number: 5 (lower is better) Translates to: NRVLCVEGSMQEACE*SGGTGTQSSLLLLI Trigger: GATGAGTAGAAGTAAAGAGGACTGTGTTCCAGTACCGCCGGACCACTCACAAGCTTCTTGCATTGAGCCTTCCACACATAAAACTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 90 bp | TACAGTCTGTGTTTTTCCATCAAGTGGCACGAGGGAAGATGGCTTTaGGTAGTCAATAAACAAATCCTGAGTGTCCCAAACAGTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YSLCFSIKWHEGRWL*VVNKQILSVPNSVC Trigger: GCACACACTGTTTGGGACACTCAGGATTTGTTTATTGACTACGCAAAGCCATCTTCCCTCGTGCCACTTGATGGAAAAACACAGACTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | ACTCATAAAGGAACCCAGAGCCCTCGGGACCATGTCCTCTTTGCACTCATGAAGGATTCTTCCCTGATTTaGCTAAGAGATTTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: THKGTQSPRDHVLFALMKDSSLI*LRDFFR Trigger: TCTGAAGAAATCTCTTAGCAAAATCAGGGAAGAATC...CTTCATGAGTGCAAAGAGGACATGGTCCCGAGGGCTCTGGGTTCCTTTATGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS TCA 90 bp | AACATGAGCTCCATCCAAAGCATACTGGTTGACAAAGCCAAAGAGTaGACTAATAACGTCTCTCTCCTTTTCCACAACCATGAGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NMSSIQSILVDKAKE*TNNVSLLFHNHECL Trigger: GAGACACTCATGGTTGTGGAAAAGGAGAGAGACGTTATTAGTTCACTCTTTGGCTTTGTCAACCAGTATGCTTTGGATGGAGCTCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 90 bp | CTTCATATGCCACTTTCCCTCCTTGTCAGCAATAGACTGTCTCACTaGAGTGACGGTCTCTTTTACTTTATGCCTCATATGCTTCATATG | + |
|
Preference number: 5 (lower is better) Translates to: LHMPLSLLVSNRLSH*SDGLFYFMPHMLHM Trigger: CATATGAAGCATATGAGGCATAAAGTAAAAGAGACCGTCACTGCAGTGAGACAGTCTATTGCTGACAAGGAGGGAAAGTGGCATATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 90 bp | CCTCTTCAGAGTCTGCTATTGTCTTATATGTCAAGGTTTTCTCTATaGGAGTCCTCATATTTGGATCCTTCTCAAGGAGTGTGGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLQSLLLSYMSRFSL*ESSYLDPSQGVWNC Trigger: ACAGTTCCACACTCCTTGAGAAGGATCCAAATATGAGGACTCCCATAGAGAAAACCTTGACATATAAGACAATAGCAGACTCTGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | GTAGAAAATGTCATTTGTCTGAACCTTCAGTCTTGTCTTTGCAGACAGGGCCTCCAGTTCTACTTTGTGTaGTTCAAGTGTCTTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VENVICLNLQSCLCRQGLQFYFV*FKCLGI Trigger: AATCCCAAGACACTTGAACAACACAAAGTAGAACTG...GAGGCCCTGTCTGCAAAGACAAGACTGAAGGTTCAGACAAATGACATTTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | CACTCTGCAGGACCAATAGACTTAGAATTCATTAAGCCTGCTTACAATCTAAGGTCTCTGAAAACTTCTTaGGCAAGAGCCTCATCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HSAGPIDLEFIKPAYNLRSLKTS*ARASSN Trigger: ATTGGATGAGGCTCTTGCCAAAGAAGTTTTCAGAGA...CCTTAGATTGTAAGCAGGCTTAATGAATTCTAAGTCTATTGGTCCTGCAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | GTTCATGGTACTGAAACAGGAAATGATCATTTCAGAAATGCTCAGCCGACTATATATTGTCAATCCTGCTaGGCCAGCCTTACAATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHGTETGNDHFRNAQPTIYCQSC*ASLTMF Trigger: GAACATTGTAAGGCTGGCCAAGCAGGATTGACAATA...TATAGTCGGCTGAGCATTTCTGAAATGATCATTTCCTGTTTCAGTACCATGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | TCACCAACCACATGCATTTTATCCCATCAACATCACTCTGCAGGACCAATAGACTACTTTGTGAATTCTTaGCAGTATCTGATAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPTTCILSHQHHSAGPIDYFVNS*QYLIEE Trigger: CTCCTCTATCAGATACTGCAAAGAATTCACAAAGTA...GTCTATTGGTCCTGCAGAGTGATGTTGATGGGATAAAATGCATGTGGTTGGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS-3UTR CAA 90 bp | CACTCTGCAGGACCAATAGACTTAGAATTCATTAAGCCTGCTTACAATCTAAGGCAAGGACCGAACCTTTaGAATCTTCTCTTGTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: HSAGPIDLEFIKPAYNLRQGPNL*NLLLCI Trigger: AATACACAAGAGAAGATTCAAAAGGTTCGGTCCTTG...CCTTAGATTGTAAGCAGGCTTAATGAATTCTAAGTCTATTGGTCCTGCAGAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS TCA 90 bp | ACTTCTGGAAGAGTTTCATGTAATATACCAATACCACTCAACCTCTaGAAAGAATCCCATAACAGAGTTTTATGTGTGGAAGGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TSGRVSCNIPIPLNL*KESHNRVLCVEGSM Trigger: CATTGAGCCTTCCACACATAAAACTCTGTTATGGGATTCTTTTCAGAGGTTGAGTGGTATTGGTATATTACATGAAACTCTTCCAGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
||
| CDS CCA 72 bp | AACCTCATCTACCAGACGGGCTTGCTCTTTCTGGAATaGCTCACTCCTCTTCACCGGCAGAGTCCCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NLIYQTGLLFLE*LTPLHRQSPSG Trigger: TCCAGAGGGACTCTGCCGGTGAAGAGGAGTGAGCCATTCCAGAAAGAGCAAGCCCGTCTGGTAGATGAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
||
| CDS GCA 72 bp | AGAACTACTCTGGCAACCTCATCTACCAGACGGGCTTaGTCTTTCTGGAATGGCTCACTCCTCTTCACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTTLATSSTRRA*SFWNGSLLFTG Trigger: GCCGGTGAAGAGGAGTGAGCCATTCCAGAAAGAGCAAGCCCGTCTGGTAGATGAGGTTGCCAGAGTAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
||
| CDS CAA 90 bp | TGGGAGTCCTCATATTTGGATCCTTCTCAAGGAGTGTGGAACTGTTaGTATCTGAGGACGCGGCACACTGTAAGGGAAAAGGCACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WESSYLDPSQGVWNC*YLRTRHTVREKAQG Trigger: GCCCTGTGCCTTTTCCCTTACAGTGTGCCGCGTCCTCAGATACAAACAGTTCCACACTCCTTGAGAAGGATCCAAATATGAGGACTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
||
| CDS GCA 72 bp | CAAATCCTGAGTGTCCCAAACAGTGTGTGCATCATCTaGTTGCACAGCTTTGGCTACAGGGCTCAGTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QILSVPNSVCII*LHSFGYRAQFY Trigger: GTAGAACTGAGCCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACACACTGTTTGGGACACTCAGGATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
||
| CDS CCA 72 bp | TTATGTGTGGAAGGCTCAATGCAAGAAGCTTGTGAGTaGTCCGGCGGTACTGGAACACAGTCCTCTTTACTT | + |
|
Preference number: 6 (lower is better) Translates to: LCVEGSMQEACE*SGGTGTQSSLL Trigger: AAGTAAAGAGGACTGTGTTCCAGTACCGCCGGACCACTCACAAGCTTCTTGCATTGAGCCTTCCACACATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 72 bp | ATCCTGAGTGTCCCAAACAGTGTGTGCATCATCTGCTaGCACAGCTTTGGCTACAGGGCTCAGTTCTACTTT | + |
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Preference number: 6 (lower is better) Translates to: ILSVPNSVCIIC*HSFGYRAQFYF Trigger: AAAGTAGAACTGAGCCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACACACTGTTTGGGACACTCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 72 bp | AATCCCATAACAGAGTTTTATGTGTGGAAGGCTCAATaGAAGAAGCTTGTGAGTGGTCCGGCGGTACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: NPITEFYVWKAQ*KKLVSGPAVLE Trigger: TTCCAGTACCGCCGGACCACTCACAAGCTTCTTGCATTGAGCCTTCCACACATAAAACTCTGTTATGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 72 bp | GTCAATAAACAAATCCTGAGTGTCCCAAACAGTGTGTaGATCATCTGCTTGCACAGCTTTGGCTACAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VNKQILSVPNSV*IICLHSFGYRA Trigger: AGCCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACACACTGTTTGGGACACTCAGGATTTGTTTATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 72 bp | CCCAAACAGTGTGTGCATCATCTGCTTGCACAGCTTTaGCTACAGGGCTCAGTTCTACTTTGTGTTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PKQCVHHLLAQL*LQGSVLLCVVQ Trigger: TTGAACAACACAAAGTAGAACTGAGCCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACACACTGTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 72 bp | CCACTTTCCCTCCTTGTCAGCAATAGACTGTCTCACTaGAGTGACGGTCTCTTTTACTTTATGCCTCATATG | + |
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Preference number: 6 (lower is better) Translates to: PLSLLVSNRLSH*SDGLFYFMPHM Trigger: CATATGAGGCATAAAGTAAAAGAGACCGTCACTGCAGTGAGACAGTCTATTGCTGACAAGGAGGGAAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 72 bp | TCATATTTGGATCCTTCTCAAGGAGTGTGGAACTGTTaGTATCTGAGGACGCGGCACACTGTAAGGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SYLDPSQGVWNC*YLRTRHTVREK Trigger: CTTTTCCCTTACAGTGTGCCGCGTCCTCAGATACAAACAGTTCCACACTCCTTGAGAAGGATCCAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 90 bp | AATAAACAAATCCTGAGTGTCCCAAACAGTGTGTGCATCATCTGCTaGCACAGCTTTGGCTACAGGGCTCAGTTCTACTTTGTGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: NKQILSVPNSVCIIC*HSFGYRAQFYFVLF Trigger: GAACAACACAAAGTAGAACTGAGCCCTGTAGCCAAAGCTGTGCAAGCAGATGATGCACACACTGTTTGGGACACTCAGGATTTGTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 72 bp | AGTCTGTGTTTTTCCATCAAGTGGCACGAGGGAAGATaGCTTTGCGTAGTCAATAAACAAATCCTGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SLCFSIKWHEGR*LCVVNKQILSV Trigger: GACACTCAGGATTTGTTTATTGACTACGCAAAGCCATCTTCCCTCGTGCCACTTGATGGAAAAACACAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 72 bp | GCAGAGTCCCTCTGGAAACACTACTTTGTGAATTCTTaGCAGTATCTGATAGAGGAGAGTCTTCCTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AESLWKHYFVNS*QYLIEESLPLQ Trigger: CTGAAGAGGAAGACTCTCCTCTATCAGATACTGCAAAGAATTCACAAAGTAGTGTTTCCAGAGGGACTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS TCA 72 bp | TTACCAAGTCTGACACATCTTCTGTTGGGGGTTCTCTaGTCTGACTTGTTACCAGATGTTTCTGAGGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LPSLTHLLLGVL*SDLLPDVSEVN Trigger: GTTTACCTCAGAAACATCTGGTAACAAGTCAGATCAGAGAACCCCCAACAGAAGATGTGTCAGACTTGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 72 bp | CTGTTACGTGCTACATGGCTTCTGGCAAGGCACTTGTaGATATCTTGTGGCTTTACATTAAATGTTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLRATWLLARHL*ISCGFTLNVSA Trigger: TGCAGAAACATTTAATGTAAAGCCACAAGATATGCACAAGTGCCTTGCCAGAAGCCATGTAGCACGTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS TCA 72 bp | TCCATCCAAAGCATACTGGTTGACAAAGCCAAAGAGTaGACTAATAACGTCTCTCTCCTTTTCCACAACCAT | + |
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Preference number: 6 (lower is better) Translates to: SIQSILVDKAKE*TNNVSLLFHNH Trigger: ATGGTTGTGGAAAAGGAGAGAGACGTTATTAGTTCACTCTTTGGCTTTGTCAACCAGTATGCTTTGGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS GCA 72 bp | TCTCCAAGGCTACATGGTACTGTGGTCTTCAATTTTTaGTCCACCAGAAAAGCTTTAGTTAGTGATACAGTC | + |
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Preference number: 6 (lower is better) Translates to: SPRLHGTVVFNF*STRKALVSDTV Trigger: GACTGTATCACTAACTAAAGCTTTTCTGGTGGAGCAAAAATTGAAGACCACAGTACCATGTAGCCTTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 90 bp | CTATTGTCTTATATGTCAAGGTTTTCTCTATGGGAGTCCTCATATTaGGATCCTTCTCAAGGAGTGTGGAACTGTTTGTATCTGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: LLSYMSRFSLWESSY*DPSQGVWNCLYLRT Trigger: CGTCCTCAGATACAAACAGTTCCACACTCCTTGAGAAGGATCCAAATATGAGGACTCCCATAGAGAAAACCTTGACATATAAGACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 90 bp | TTGCAGTATCTGATAGAGGAGAGTCTTCCTCTTCAGAGTCTGCTATaGTCTTATATGTCAAGGTTTTCTCTATGGGAGTCCTCATATTTG | + |
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Preference number: 6 (lower is better) Translates to: LQYLIEESLPLQSLL*SYMSRFSLWESSYL Trigger: CAAATATGAGGACTCCCATAGAGAAAACCTTGACATATAAGACAATAGCAGACTCTGAAGAGGAAGACTCTCCTCTATCAGATACTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 72 bp | ATATGTCAAGGTTTTCTCTATGGGAGTCCTCATATTTaGATCCTTCTCAAGGAGTGTGGAACTGTTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: ICQGFLYGSPHI*ILLKECGTVCI Trigger: GATACAAACAGTTCCACACTCCTTGAGAAGGATCCAAATATGAGGACTCCCATAGAGAAAACCTTGACATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 72 bp | AGTCTGCTATTGTCTTATATGTCAAGGTTTTCTCTATaGGAGTCCTCATATTTGGATCCTTCTCAAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLLLSYMSRFSL*ESSYLDPSQGV Trigger: CACTCCTTGAGAAGGATCCAAATATGAGGACTCCCATAGAGAAAACCTTGACATATAAGACAATAGCAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 72 bp | AATCTGTTACGTGCTACATGGCTTCTGGCAAGGCACTaGTGCATATCTTGTGGCTTTACATTAAATGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: NLLRATWLLARH*CISCGFTLNVS Trigger: AGAAACATTTAATGTAAAGCCACAAGATATGCACAAGTGCCTTGCCAGAAGCCATGTAGCACGTAACAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CAA 72 bp | TATATGTCAAGGTTTTCTCTATGGGAGTCCTCATATTaGGATCCTTCTCAAGGAGTGTGGAACTGTTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: YMSRFSLWESSY*DPSQGVWNCLY Trigger: ATACAAACAGTTCCACACTCCTTGAGAAGGATCCAAATATGAGGACTCCCATAGAGAAAACCTTGACATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS CCA 72 bp | TTACTCTTCTCATCATATGGCTCCATTCTTTTAATTTaGTTCTGTAGACTCATGCACTCTGATCTTGCATTT | + |
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Preference number: 6 (lower is better) Translates to: LLFSSYGSILLI*FCRLMHSDLAF Trigger: AAATGCAAGATCAGAGTGCATGAGTCTACAGAACCAAATTAAAAGAATGGAGCCATATGATGAGAAGAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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| CDS TCA 72 bp | AGAGTTTCATGTAATATACCAATACCACTCAACCTCTaGAAAGAATCCCATAACAGAGTTTTATGTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RVSCNIPIPLNL*KESHNRVLCVE Trigger: TTCCACACATAAAACTCTGTTATGGGATTCTTTTCAGAGGTTGAGTGGTATTGGTATATTACATGAAACTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070607.9 |
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