Pregenerated sensors for HASPIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050107Ensembl transcript IDs: ENSMUST00000052140.3
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGCTCTCTGCTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAACTCTTAAGGATGTaGTTTCACCTCCATCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: CSLLCILTTASRAVRTTAELLRM*FHLHLA Trigger: AGCCAGATGGAGGTGAAAGCACATCCTTAAGAGTTC...AGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAGCAGAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTCTCTGCTCTGCATCTTaGCAACAGCATCAAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LKFYKFCSCDWGVNRINILCSAS*QQHQEQ Trigger: CTGCTCTTGATGCTGTTGTCAAGATGCAGAGCAGAG...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTATCTCTTTTAAGAAGCTaGCAGGAACTCTTAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: CSSYTKYQGSKTSNIRLVSLLRS*QELLRM Trigger: CATCCTTAAGAGTTCCTGTCAGCTTCTTAAAAGAGA...TACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| 3UTR TCA 72 bp | CTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTaGGGCTTGGTTTTGCTCATCCTACACCAAGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: LDNSIKSSKDHS*GLVLLILHQVS Trigger: TGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| 3UTR GCA 72 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTaGTCATCCTACACCAAGTATCAAGGCTCAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: SRAVRTTAEAWF*SSYTKYQGSKT Trigger: GGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGGGGGTGCTGCACTTCTaGGGGAGCCGAGGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCILTTASRAVRTTAEAWGVLHF*GSRGRS Trigger: GCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCC...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGGTACCTGTCACCGGTTaGTGCCACCTGGGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCILTTASRAVRTTAEAWVPVTG*CHLGAG Trigger: CCCTGCCCCCAGGTGGCAGCAACCGGTGACAGGTAC...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGGAGGCTGCCGGCAAGTaGAAGCTCCCGGGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCILTTASRAVRTTAEAWEAAGK*KLPGTA Trigger: TGCAGTCCCCGGGAGCTTCCACTTGCCGGCAGCCTC...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTACCGCGAGGCCGGAGAGCTaGAGAGGGAGGCACTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRMCFHLHLALVAEISTARPES*RGRHWC Trigger: GCACCAGTGCCTCCCTCTTCAGCTCTCCGGCCTCGC...GGTACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAAGGCTGCACGGGGTGCTaGACTTCTGCGGGAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLRLGFAHPTPSIKAQKGCTGC*TSAGAE Trigger: CTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCC...TTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACGCTGGCCCACGAGGCTaGCGGGGAAGTCGGGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSYTKYQGSKTSNIRLVDAGPRG*RGSRGR Trigger: ACGACCCCGACTTCCCCGGCAGCCTCGTGGGCCAGC...GTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | CCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAAAGAGGGAGGCACTGGTaGCCAGCTCGTTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRLGFAHPTPSIKAQKRGRHW*PARCCP Trigger: GGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCT...TTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTACCTTCAGGTTCGGCGGCTaGAACCATTGCTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRMCFHLHLALVAEISTFRFGG*NHCSAS Trigger: GCTGGCTGAGCAATGGTTCCAGCCGCCGAACCTGAA...GGTACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTATTTGTCAGGGTCCGCTaGTTCCGGGAGCCGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSSYTKYQGSKTSNIRLVFVRVR*FREPLP Trigger: GGGCAGCGGCTCCCGGAACCAGCGGACCCTGACAAA...TACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATCCTGTAGCCCATGGGTaGGAATGGTGCTCGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAVRTTAEAWFCSSYTKYPVAHG*EWCSFS Trigger: GGAAAACGAGCACCATTCCCACCCATGGGCTACAGG...ATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTCGAGGCAGCCCGGGCTaGAGTTGGGGAAAGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LKFYKFCSCDWGVNRINIRGSPG*SWGKVA Trigger: CGCCACCTTTCCCCAACTGCAGCCCGGGCTGCCTCG...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TGCTCTCTGCTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTTGCCACAGCCAGAGATaGAGTGATCTGGTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSLLCILTTASRAVRTTACHSQR*SDLVEN Trigger: ATTCTCCACCAGATCACTGCATCTCTGGCTGTGGCA...AGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAGCAGAGAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGAACCGAAGGAGGCTCTaGTTTTGGTCCAAGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKNRRRL*FWSKNP Trigger: GGGATTCTTGGACCAAAACCAGAGCCTCCTTCGGTT...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGAAGAGCTGGTCTTCCTaGAAAAAGTCAGGCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKKSWSS*KKSGRS Trigger: TGACCGGCCTGACTTTTTCCAGGAAGACCAGCTCTT...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | CCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACAGCCAGAGATGCAGTaGTCTGGTGGAGAATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQLRLGFAHPTPSIKAQKQPEMQ*SGGECS Trigger: AGAGCATTCTCCACCAGATCACTGCATCTCTGGCTG...TTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCTGCTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTAGTCAGGCCGGTCATTaGCAGATCTTTTGGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLLCILTTASRAVRTTASQAGH*QIFWLC Trigger: ACACAACCAAAAGATCTGCCAATGACCGGCCTGACT...AGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAGCAGAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACGTGCAGGGATGCTTCTaGCACAGCCAGAGATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSYTKYQGSKTSNIRLVDVQGCF*HSQRCS Trigger: ACTGCATCTCTGGCTGTGGCAGAAGCATCCCTGCAC...GTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACTCTGCTTCCCGGTGCTCAAAGTaGAGGGATGCTTCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YTKYQGSKTSNIRLVDSASRCSK*RDASAT Trigger: TGTGGCAGAAGCATCCCTGCACTTTGAGCACCGGGA...AGCAGAGTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACTCTGCTGTGGAGAATGCTCTTTaGAGTCGCCACAGAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: YTKYQGSKTSNIRLVDSAVENAL*SRHRGQ Trigger: CTGTCCTCTGTGGCGACTGCAAAGAGCATTCTCCAC...AGCAGAGTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACCAGCCTTTGGACTCTTaGAGTGTTTGTCAGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSYTKYQGSKTSNIRLVDQPLDS*SVCQGP Trigger: CGGACCCTGACAAACACTCCAAGAGTCCAAAGGCTG...GTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACTCTGCTCGAGGTCGCAGCCTTTaGACTCTTGGAGTGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTKYQGSKTSNIRLVDSARGRSL*TLGVFV Trigger: GACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCG...AGCAGAGTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACGTCCAAGAATCCCTCTaGCTAGTATTCAAGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TASRAVRTTAEAWFCSSYVQESL*LVFKFH Trigger: ATGGAACTTGAATACTAGCCAGAGGGATTCTTGGAC...GTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGATAATTTTCTTCTTGTaGAAACCGAAGGAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCILTTASRAVRTTAEAWIIFFL*KPKEAL Trigger: CAGAGCCTCCTTCGGTTTCCACAAGAAGAAAATTAT...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | GAACTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTCCACAGAGGACAGCTTaGTTTTCATTCGCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELLRMCFHLHLALVAEISPQRTA*FSFAPS Trigger: ACTTGGAGCGAATGAAAACCAAGCTGTCCTCTGTGG...ACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGCTCAGTACAGTCCTGTaGAAATGTTGCAGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKLSTVL*KCCRFF Trigger: GAAAAACCTGCAACATTTCCACAGGACTGTACTGAG...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | CCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAATTGAACACAGTGTACTaGGTTCAGCCCAATAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRLGFAHPTPSIKAQKLNTVY*VQPNKA Trigger: GGCTTTATTGGGCTGAACTCAGTACACTGTGTTCAA...TTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTACCAGTCTGTTTCCCATCTaGTGTCTTCTTTCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRMCFHLHLALVAEISTSLFPI*CLLSQH Trigger: GTGTTGTGAAAGAAGACAGCAGATGGGAAACAGACT...GGTACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTCTCAAAGTGCAGGGATaGTTCTGCCACAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSSYTKYQGSKTSNIRLLKVQG*FCHSQR Trigger: TCTCTGGCTGTGGCAGAAGCATCCCTGCACTTTGAG...AAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | GAACTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTAGAGATGCAGTGATCTaGTGGAGAATGCTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELLRMCFHLHLALVAEISRDAVI*WRMLFA Trigger: TGCAAAGAGCATTCTCCACCAGATCACTGCATCTCT...ACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTACCGTCCTGTGGAAATGTTaGAGGTTTTTCCTTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRMCFHLHLALVAEISTVLWKC*RFFLIC Trigger: GCAAATAAGGAAAAACCTGCAACATTTCCACAGGAC...GGTACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGAGGATAATAAAGAGCTaGTCTTCCTGGAAAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKRIIKS*SSWKKS Trigger: TGACTTTTTCCAGGAAGACCAGCTCTTTATTATCCT...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | AAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTTTCAAGGCTAAAGAGAGATaGCCTGAAGCTGGCTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFYKFCSCDWGVNRINIFKAKER*PEAGFG Trigger: GCCGAAGCCAGCTTCAGGTCATCTCTCTTTAGCCTT...GAAAATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | TTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTTCAGAATCTTGTCTGTaGGGTAATGCAGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCSSYTKYQGSKTSNIRLSESCL*GNAATA Trigger: TGCTGTGGCTGCATTACCTCACAGACAAGATTCTGA...AAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | CCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACATTGGCAGATCTTTTaGTTGTGTTATAGTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLRLGFAHPTPSIKAQKHWQIF*LCYSDP Trigger: GGGATCACTATAACACAACCAAAAGATCTGCCAATG...TTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTACTTGTTCTCTTCTGTaGCCCCTGAGTTCACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKFYKFCSCDWGVNRINITCSLL*PLSSQG Trigger: GCCTTGTGAACTCAGGGGCCACAGAAGAGAACAAGT...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTAGACTCCTCAAAGGTTTTCTaGTGGGACCCATTGACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSYTKYQGSKTSNIRLVDSSKVF*WDPLTK Trigger: TTTAGTCAATGGGTCCCACCAGAAAACCTTTGAGGA...GTCTACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR GCA 90 bp | TTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTTATTTGCTTCATGGCTaGGCTCTGGCATTTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSSYTKYQGSKTSNIRLYLLHG*ALAFSL Trigger: AAGACTAAATGCCAGAGCGCAGCCATGAAGCAAATA...AAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CCA 90 bp | TGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTATCAAAGGTTTTCTGGTaGGACCCATTGACTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSSYTKYQGSKTSNIRLVSKVFW*DPLTKS Trigger: AGATTTAGTCAATGGGTCCCACCAGAAAACCTTTGA...TACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | TGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTGTATGGTCGTTAATTATCTaGAACACTTCTCCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: CSSYTKYQGSKTSNIRLVWSLII*NTSPNT Trigger: AGTGTTTGGAGAAGTGTTTCAGATAATTAACGACCA...TACAAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR TCA 90 bp | TTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTTGTAGCGGAGTTCTTTaGGGTTGGTTTTCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSSYTKYQGSKTSNIRLCSGVL*GWFSLR Trigger: TCTTAAAGAAAACCAACCTCAAAGAACTCCGCTACA...AAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | GGACTCTTGGAGTGTTTGTCAGGGTCCGCTGGTTCCGGGAGCCGCTaGCCCGAGGACGCCTCCGCCGCTGGCCCACGAGGCTGCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLLECLSGSAGSGSR*PEDASAAGPRGCRG Trigger: TCCCCGGCAGCCTCGTGGGCCAGCGGCGGAGGCGTCCTCGGGGCAGCGGCTCCCGGAACCAGCGGACCCTGACAAACACTCCAAGAGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | GGCAGCCCGGGCTGCAGTTGGGGAAAGGTGGCGGTCGCAGCCGGCTaGACGGGGTGCTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSPGCSWGKVAVAAG*TGCCTSAGAEVAAF Trigger: AAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCCCGGGCTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | ACTGTGGTCCGACCCGAGGCAGCCCGGGCTGCAGTTGGGGAAAGGTaGCGGTCGCAGCCGGCTGCACGGGGTGCTGCACTTCTGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TVVRPEAARAAVGER*RSQPAARGAALLRE Trigger: CTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | GGCTGCAGTTGGGGAAAGGTGGCGGTCGCAGCCGGCTGCACGGGGTaGTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTTGGACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCSWGKVAVAAGCTG*CTSAGAEVAAFGLL Trigger: CAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | TGCAGTTGGGGAAAGGTGGCGGTCGCAGCCGGCTGCACGGGGTGCTaGACTTCTGCGGGAGCCGAGGTCGCAGCCTTTGGACTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSWGKVAVAAGCTGC*TSAGAEVAAFGLLE Trigger: CTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | AGAGGGAGGCACTGGTGCCCAGCTCGTTGCTGTCCCTGGACTGGATaGACACACTGTGGTCCGACCCGAGGCAGCCCGGGCTGCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGRHWCPARCCPWTG*THCGPTRGSPGCSW Trigger: CCAACTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | GGTGCTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTTGGACTCTTaGAGTGTTTGTCAGGGTCCGCTGGTTCCGGGAGCCGCTGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GAALLREPRSQPLDS*SVCQGPLVPGAAAP Trigger: CGGGGCAGCGGCTCCCGGAACCAGCGGACCCTGACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | CTGGTGCCCAGCTCGTTGCTGTCCCTGGACTGGATGCACACACTGTaGTCCGACCCGAGGCAGCCCGGGCTGCAGTTGGGGAAAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVPSSLLSLDWMHTL*SDPRQPGLQLGKGG Trigger: GCCACCTTTCCCCAACTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | CTGAAGAGGGAGGCACTGGTGCCCAGCTCGTTGCTGTCCCTGGACTaGATGCACACACTGTGGTCCGACCCGAGGCAGCCCGGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKREALVPSSLLSLD*MHTLWSDPRQPGLQ Trigger: CTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCTTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 90 bp | AGTCAGCATACAAAGGGTCGGGGGCTCCGGGCGAGGCCGGAGAGCTaGAGAGGGAGGCACTGGTGCCCAGCTCGTTGCTGTCCCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SQHTKGRGLRARPES*RGRHWCPARCCPWT Trigger: AGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCTTCAGCTCTCCGGCCTCGCCCGGAGCCCCCGACCCTTTGTATGCTGACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | GGGAAAGGTGGCGGTCGCAGCCGGCTGCACGGGGTGCTGCACTTCTaGGGGAGCCGAGGTCGCAGCCTTTGGACTCTTGGAGTGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKGGGRSRLHGVLHF*GSRGRSLWTLGVFV Trigger: GACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTGTACCTGTCACCGGTaGCTGCCACCTGGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCILTTASRAVRTTAEAWCTCHR*LPPGGR Trigger: CCTGCCCCCAGGTGGCAGCAACCGGTGACAGGTACA...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | GTCCCGGTGCTCAAAGTGCAGGGATGCTTCTGCCACAGCCAGAGATaGAGTGATCTGGTGGAGAATGCTCTTTGCAGTCGCCACAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPVLKVQGCFCHSQR*SDLVENALCSRHRG Trigger: TCCTCTGTGGCGACTGCAAAGAGCATTCTCCACCAGATCACTGCATCTCTGGCTGTGGCAGAAGCATCCCTGCACTTTGAGCACCGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 90 bp | GGTGCTCAAAGTGCAGGGATGCTTCTGCCACAGCCAGAGATGCAGTaGTCTGGTGGAGAATGCTCTTTGCAGTCGCCACAGAGGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAQSAGMLLPQPEMQ*SGGECSLQSPQRTA Trigger: AGCTGTCCTCTGTGGCGACTGCAAAGAGCATTCTCCACCAGATCACTGCATCTCTGGCTGTGGCAGAAGCATCCCTGCACTTTGAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACCTGGTGCCCAGCTCGTaGCTGTCCCTGGACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TASRAVRTTAEAWFCSSYLVPSS*LSLDWM Trigger: CATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAG...GTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 90 bp | GGCTTTCAGCAGCAAGGGAGGGTAAAGCCCTTGAACACAGTGTACTaGGTTCAGCCCAATAAAGCCTTCTGTGCGGTTGTAGGCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GFQQQGRVKPLNTVY*VQPNKAFCAVVGLT Trigger: AGTGAGGCCTACAACCGCACAGAAGGCTTTATTGGGCTGAACTCAGTACACTGTGTTCAAGGGCTTTACCCTCCCTTGCTGCTGAAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGGCAGCCTTTGGACTCTaGGAGTGTTTGTCAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKAAFGL*ECLSGS Trigger: GGACCCTGACAAACACTCCAAGAGTCCAAAGGCTGC...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGGGTTCCCGTTGCTTCTaGCTGTTTCCTCTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKGSRCF*LFPLPE Trigger: CTCCGGAAGAGGAAACAGCAAGAAGCAACGGGAACC...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGAAGGAGGCTCTGGTTTaGGTCCAAGAATCCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCILTTASRAVRTTAEAWKEALV*VQESLW Trigger: CCAGAGGGATTCTTGGACCAAAACCAGAGCCTCCTT...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGGGTGGAGAATGCTCTTaGCAGTCGCCACAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRAVRTTAEAWFCSSYTKGGECS*QSPQRT Trigger: TGTCCTCTGTGGCGACTGCAAAGAGCATTCTCCACC...CTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | AGGTTGGTTTTCTTTAAGAGCACATTTCCCCAGTGTAAGTCCCGGTaGTCAAAGTGCAGGGATGCTTCTGCCACAGCCAGAGATGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVFFKSTFPQCKSR*SKCRDASATARDAV Trigger: CACTGCATCTCTGGCTGTGGCAGAAGCATCCCTGCACTTTGAGCACCGGGACTTACACTGGGGAAATGTGCTCTTAAAGAAAACCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | GCTGGTCTTCCTGGAAAAAGTCAGGCCGGTCATTGGCAGATCTTTTaGTTGTGTTATAGTGATCCCAGGCTTTCAGCAGCAAGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGLPGKSQAGHWQIF*LCYSDPRLSAAREG Trigger: ACCCTCCCTTGCTGCTGAAAGCCTGGGATCACTATAACACAACCAAAAGATCTGCCAATGACCGGCCTGACTTTTTCCAGGAAGACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | TGGCAGAGCAGGTCCGTGGCAGAGCTGAAACTCAGTACAGTCCTGTaGAAATGTTGCAGGTTTTTCCTTATTTGCTTCATGGCTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WQSRSVAELKLSTVL*KCCRFFLICFMAAL Trigger: GAGCGCAGCCATGAAGCAAATAAGGAAAAACCTGCAACATTTCCACAGGACTGTACTGAGTTTCAGCTCTGCCACGGACCTGCTCTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTACCCCGAGGTCGCAGCCTTaGGACTCTTGGAGTGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLRMCFHLHLALVAEISTPRSQP*DSWSVC Trigger: ACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGG...GGTACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACCCATCTGTCCCAAACTaGTTCTCTTCTGTGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TASRAVRTTAEAWFCSSYPSVPN*FSSVAP Trigger: AGGGGCCACAGAAGAGAACAAGTTTGGGACAGATGG...GTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACCCTTTTCTTCTTAGATaGGTGGTAGTGGCGGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TASRAVRTTAEAWFCSSYPFLLR*VVVAGR Trigger: CCTCCCCGCCACTACCACCAATCTAAGAAGAAAAGG...GTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGTAAGGACCACAGCTGAGGCTTGGTTTTGCTCATCCTACACCAAGTATTCACCCCAGCAGTTTTaGTTCTCCTTCCTCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAVRTTAEAWFCSSYTKYSPQQF*FSFLMS Trigger: GCTCATGAGGAAGGAGAACAAAAACTGCTGGGGTGA...ATACTTGGTGTAGGATGAGCAAAACCAAGCCTCAGCTGTGGTCCTTACTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 90 bp | AGGTCCGTGGCAGAGCTGAAACTCAGTACAGTCCTGTGGAAATGTTaGAGGTTTTTCCTTATTTGCTTCATGGCTGCGCTCTGGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSVAELKLSTVLWKC*RFFLICFMAALWHL Trigger: TAAATGCCAGAGCGCAGCCATGAAGCAAATAAGGAAAAACCTGCAACATTTCCACAGGACTGTACTGAGTTTCAGCTCTGCCACGGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | GAACTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTAAGTCAGGCCGGTCATaGGCAGATCTTTTGGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ELLRMCFHLHLALVAEISKSGRS*ADLLVV Trigger: CACAACCAAAAGATCTGCCAATGACCGGCCTGACTT...ACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTAAGGATGTGCTTTCACCTCCATCTGGCTCTAGTGGCAGAGATTAGTACCCAGGTTTTTCCTTATTaGCTTCATGGCTGCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRMCFHLHLALVAEISTQVFPY*LHGCAL Trigger: CAGAGCGCAGCCATGAAGCAAATAAGGAAAAACCTG...GGTACTAATCTCTGCCACTAGAGCCAGATGGAGGTGAAAGCACATCCTTAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | CTCTGCATCTTGACAACAGCATCAAGAGCAGTAAGGACCACAGCTGAGGCTTGGAGTCCTGTGGAAATGTaGCAGGTTTTTCCTTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCILTTASRAVRTTAEAWSPVEM*QVFPYL Trigger: CAAATAAGGAAAAACCTGCAACATTTCCACAGGACT...CCAAGCCTCAGCTGTGGTCCTTACTGCTCTTGATGCTGTTGTCAAGATGCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTGGACTCTTGGAGTGTTaGTCAGGGTCCGCTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKFYKFCSCDWGVNRINIGLLEC*SGSAGS Trigger: GGAACCAGCGGACCCTGACAAACACTCCAAGAGTCC...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTGGGGAGGGGTTCCCGTaGCTTCTTGCTGTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKFYKFCSCDWGVNRINIGEGFP*LLAVSS Trigger: AGAGGAAACAGCAAGAAGCAACGGGAACCCCTCCCC...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 90 bp | TACACTCCCCATAAACCTTTTCAGCATAAGATGGCCTTTGGTCTGTaGCATGCAGGGTCTTTAAGGGACTTAGCAAATACACAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YTPHKPFQHKMAFGL*HAGSLRDLANTQKS Trigger: GCTCTTCTGTGTATTTGCTAAGTCCCTTAAAGACCCTGCATGTCACAGACCAAAGGCCATCTTATGCTGAAAAGGTTTATGGGGAGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 90 bp | ATAGCAATGATTTTTAGGGCTACAGGTGCTTGGTCGTTAATTATCTaGAACACTTCTCCAAACACTCCTTCCCCAATCTTCTCACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: IAMIFRATGAWSLII*NTSPNTPSPIFSHR Trigger: ACGGTGTGAGAAGATTGGGGAAGGAGTGTTTGGAGAAGTGTTTCAGATAATTAACGACCAAGCACCTGTAGCCCTAAAAATCATTGCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTAGCATAAGATGGCCTTaGGTCTGTGACATGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKFYKFCSCDWGVNRINISIRWP*VCDMQG Trigger: ACCCTGCATGTCACAGACCAAAGGCCATCTTATGCT...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | TCTTTGGAGATAATGATCTCCGGCAGGATTTCCTCAAAGGTTTTCTaGTGGGACCCATTGACTAAATCTAACCCTTCAATAGCAATGATT | + |
|
Preference number: 5 (lower is better) Translates to: SLEIMISGRISSKVF*WDPLTKSNPSIAMI Trigger: AATCATTGCTATTGAAGGGTTAGATTTAGTCAATGGGTCCCACCAGAAAACCTTTGAGGAAATCCTGCCGGAGATCATTATCTCCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TTTTGCTCATCCTACACCAAGTATCAAGGCTCAAAAACCAGCAACATCAGACTTCGGAGTTCTTTGAGGTaGGTTTTCTTTAAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FCSSYTKYQGSKTSNIRLRSSLR*VFFKST Trigger: TGTGCTCTTAAAGAAAACCAACCTCAAAGAACTCCG...AAGTCTGATGTTGCTGGTTTTTGAGCCTTGATACTTGGTGTAGGATGAGCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 90 bp | TTGGAGATAATGATCTCCGGCAGGATTTCCTCAAAGGTTTTCTGGTaGGACCCATTGACTAAATCTAACCCTTCAATAGCAATGATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEIMISGRISSKVFW*DPLTKSNPSIAMIF Trigger: AAAAATCATTGCTATTGAAGGGTTAGATTTAGTCAATGGGTCCCACCAGAAAACCTTTGAGGAAATCCTGCCGGAGATCATTATCTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAATTCTATAAATTCTGCTCCTGTGATTGGGGAGTGAACCGGATAAACATTTGGCAGATCTTTTGGTaGTGTTATAGTGATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKFYKFCSCDWGVNRINIWQIFW*CYSDPR Trigger: CCTGGGATCACTATAACACAACCAAAAGATCTGCCA...AATGTTTATCCGGTTCACTCCCCAATCACAGGAGCAGAATTTATAGAATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | CACTGTGGTCCGACCCGAGGCAGCCCGGGCTGCAGTTaGGGAAAGGTGGCGGTCGCAGCCGGCTGCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HCGPTRGSPGCS*GKVAVAAGCTG Trigger: CCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | TGGAACCATTGCTCAGCCAGCCCGCCAGGCTGCCGCTaGGACCCCCGGACGCCCCTCGCCGCGTACGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WNHCSASPPGCR*DPRTPLAAYVR Trigger: TCGAACGTACGCGGCGAGGGGCGTCCGGGGGTCGCAGCGGCAGCCTGGCGGGCTGGCTGAGCAATGGTTCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | CGACCCGAGGCAGCCCGGGCTGCAGTTGGGGAAAGGTaGCGGTCGCAGCCGGCTGCACGGGGTGCTGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: RPEAARAAVGER*RSQPAARGAAL Trigger: AAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCCCGGGCTGCCTCGGGTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 72 bp | ACACTGTGGTCCGACCCGAGGCAGCCCGGGCTGCAGTaGGGGAAAGGTGGCGGTCGCAGCCGGCTGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLWSDPRQPGLQ*GKGGGRSRLHG Trigger: CCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGTGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | GGCTGCAGTTGGGGAAAGGTGGCGGTCGCAGCCGGCTaGACGGGGTGCTGCACTTCTGCGGGAGCCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSWGKVAVAAG*TGCCTSAGAEV Trigger: GACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCAACTGCAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | GGCGGTCGCAGCCGGCTGCACGGGGTGCTGCACTTCTaGGGGAGCCGAGGTCGCAGCCTTTGGACTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGRSRLHGVLHF*GSRGRSLWTLG Trigger: TCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | GGAAAGGTGGCGGTCGCAGCCGGCTGCACGGGGTGCTaGACTTCTGCGGGAGCCGAGGTCGCAGCCTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GKVAVAAGCTGC*TSAGAEVAAFG Trigger: TCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | TGGGGAAAGGTGGCGGTCGCAGCCGGCTGCACGGGGTaGTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WGKVAVAAGCTG*CTSAGAEVAAF Trigger: AAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCCCGTGCAGCCGGCTGCGACCGCCACCTTTCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | GGCTCGGAGGGCCCTCCCGGTGTACCTGTCACCGGTTaGTGCCACCTGGGGGCAGGGCACAGACGGTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: GSEGPPGVPVTG*CHLGAGHRRFT Trigger: AGTGAACCGTCTGTGCCCTGCCCCCAGGTGGCAGCAACCGGTGACAGGTACACCGGGAGGGCCCTCCGAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | AGGCTGCTGCTGAAGGCGCGCTTCAGGTTCGGCGGCTaGAACCATTGCTCAGCCAGCCCGCCAGGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RLLLKARFRFGG*NHCSASPPGCR Trigger: GCGGCAGCCTGGCGGGCTGGCTGAGCAATGGTTCCAGCCGCCGAACCTGAAGCGCGCCTTCAGCAGCAGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 72 bp | ACAAAGGGTCGGGGGCTCCGGGCGAGGCCGGAGAGCTaGAGAGGGAGGCACTGGTGCCCAGCTCGTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TKGRGLRARPES*RGRHWCPARCC Trigger: ACAGCAACGAGCTGGGCACCAGTGCCTCCCTCTTCAGCTCTCCGGCCTCGCCCGGAGCCCCCGACCCTTTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | CACTGGTGCCCAGCTCGTTGCTGTCCCTGGACTGGATaGACACACTGTGGTCCGACCCGAGGCAGCCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HWCPARCCPWTG*THCGPTRGSPG Trigger: GCCCGGGCTGCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | ACTTCTGCGGGAGCCGAGGTCGCAGCCTTTGGACTCTTGGAGTGTTaGTCAGGGTCCGCTGGTTCCGGGAGCCGCTGCCCCGAGGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSAGAEVAAFGLLEC*SGSAGSGSRCPEDA Trigger: GGCGTCCTCGGGGCAGCGGCTCCCGGAACCAGCGGACCCTGACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | GGGTGCTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTTGGACTCTaGGAGTGTTTGTCAGGGTCCGCTGGTTCCGGGAGCCGCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GCCTSAGAEVAAFGL*ECLSGSAGSGSRCP Trigger: GGGGCAGCGGCTCCCGGAACCAGCGGACCCTGACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | GGCGAGGCCGGAGAGCTGAAGAGGGAGGCACTGGTGCCCAGCTCGTaGCTGTCCCTGGACTGGATGCACACACTGTGGTCCGACCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GEAGELKREALVPSS*LSLDWMHTLWSDPR Trigger: CCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCTTCAGCTCTCCGGCCTCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | AGCTCGTTGCTGTCCCTGGACTGGATGCACACACTGTaGTCCGACCCGAGGCAGCCCGGGCTGCAGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLLSLDWMHTL*SDPRQPGLQLG Trigger: CCCCAACTGCAGCCCGGGCTGCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | GAGGCACTGGTGCCCAGCTCGTTGCTGTCCCTGGACTaGATGCACACACTGTGGTCCGACCCGAGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EALVPSSLLSLD*MHTLWSDPRQP Trigger: GGGCTGCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | AGAGGGAGGCACTGGTGCCCAGCTCGTTGCTGTCCCTaGACTGGATGCACACACTGTGGTCCGACCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRHWCPARCCP*TGCTHCGPTRG Trigger: GCCTCGGGTCGGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 72 bp | GGAGAGCTGAAGAGGGAGGCACTGGTGCCCAGCTCGTaGCTGTCCCTGGACTGGATGCACACACTGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GELKREALVPSS*LSLDWMHTLWS Trigger: GGACCACAGTGTGTGCATCCAGTCCAGGGACAGCAACGAGCTGGGCACCAGTGCCTCCCTCTTCAGCTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | GTGCTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTTaGACTCTTGGAGTGTTTGTCAGGGTCCGCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLHFCGSRGRSL*TLGVFVRVRWF Trigger: GAACCAGCGGACCCTGACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 72 bp | GGTGCTGCACTTCTGCGGGAGCCGAGGTCGCAGCCTTaGGACTCTTGGAGTGTTTGTCAGGGTCCGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GAALLREPRSQP*DSWSVCQGPLV Trigger: AACCAGCGGACCCTGACAAACACTCCAAGAGTCCAAAGGCTGCGACCTCGGCTCCCGCAGAAGTGCAGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | GGCACAGACGGTTCACTTAGGGAGGCTGCCGGCAAGTaGAAGCTCCCGGGGACTGCAGAGTCAGCATACAAA | + |
|
Preference number: 6 (lower is better) Translates to: GTDGSLREAAGK*KLPGTAESAYK Trigger: TTTGTATGCTGACTCTGCAGTCCCCGGGAGCTTCCACTTGCCGGCAGCCTCCCTAAGTGAACCGTCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | CTTAGATTGGTGGTAGTGGCGGGGAGGGGTTCCCGTTaGTTCTTGCTGTTTCCTCTTCCGGAGTGGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRLVVVAGRGSR*FLLFPLPEWPS Trigger: ACTGGGCCACTCCGGAAGAGGAAACAGCAAGAAGCAACGGGAACCCCTCCCCGCCACTACCACCAATCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | CTCAAAGTGCAGGGATGCTTCTGCCACAGCCAGAGATaGAGTGATCTGGTGGAGAATGCTCTTTGCAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LKVQGCFCHSQR*SDLVENALCSR Trigger: GCGACTGCAAAGAGCATTCTCCACCAGATCACTGCATCTCTGGCTGTGGCAGAAGCATCCCTGCACTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 72 bp | ATAGACTGTGTTGGCAGAGCAGGTCCGTGGCAGAGCTaGAACTCAGTACAGTCCTGTGGAAATGTTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IDCVGRAGPWQS*NSVQSCGNVAG Trigger: ACCTGCAACATTTCCACAGGACTGTACTGAGTTTCAGCTCTGCCACGGACCTGCTCTGCCAACACAGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | TTCTTTAAGAGCACATTTCCCCAGTGTAAGTCCCGGTaGTCAAAGTGCAGGGATGCTTCTGCCACAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FFKSTFPQCKSR*SKCRDASATAR Trigger: TCTGGCTGTGGCAGAAGCATCCCTGCACTTTGAGCACCGGGACTTACACTGGGGAAATGTGCTCTTAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | GGAGAATGCTCTTTGCAGTCGCCACAGAGGACAGCTTaGTTTTCATTCGCTCCAAGTCAACCCCACCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GECSLQSPQRTA*FSFAPSQPHQT Trigger: AGTTTGGTGGGGTTGACTTGGAGCGAATGAAAACCAAGCTGTCCTCTGTGGCGACTGCAAAGAGCATTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | CCGAAGGAGGCTCTGGTTTTGGTCCAAGAATCCCTCTaGCTAGTATTCAAGTTCCATAAGGAGACTGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: PKEALVLVQESL*LVFKFHKETDA Trigger: AGCGTCAGTCTCCTTATGGAACTTGAATACTAGCCAGAGGGATTCTTGGACCAAAACCAGAGCCTCCTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 72 bp | CACGATTCCTTCACATTCTCCCCATCTGTCCCAAACTaGTTCTCTTCTGTGGCCCCTGAGTTCACAAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: HDSFTFSPSVPN*FSSVAPEFTRL Trigger: TAGCCTTGTGAACTCAGGGGCCACAGAAGAGAACAAGTTTGGGACAGATGGGGAGAATGTGAAGGAATCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | TACACAGAAGAGCATCGAGAAGAAACAGTAAGGTGTGCTCTGTTCTaGATAGGAGGGGTCGAACATTCAGACAGGAGGGACCTGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: YTEEHREETVRCALF*IGGVEHSDRRDLEE Trigger: TTCCTCCAGGTCCCTCCTGTCTGAATGTTCGACCCCTCCTATCAAGAACAGAGCACACCTTACTGTTTCTTCTCGATGCTCTTCTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | GGTCTTCCTGGAAAAAGTCAGGCCGGTCATTGGCAGATCTTTTGGTaGTGTTATAGTGATCCCAGGCTTTCAGCAGCAAGGGAGGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLPGKSQAGHWQIFW*CYSDPRLSAAREGK Trigger: TTTACCCTCCCTTGCTGCTGAAAGCCTGGGATCACTATAACACAACCAAAAGATCTGCCAATGACCGGCCTGACTTTTTCCAGGAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | CAGGTCCGTGGCAGAGCTGAAACTCAGTACAGTCCTGTGGAAATGTaGCAGGTTTTTCCTTATTTGCTTCATGGCTGCGCTCTGGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: QVRGRAETQYSPVEM*QVFPYLLHGCALAF Trigger: AAATGCCAGAGCGCAGCCATGAAGCAAATAAGGAAAAACCTGCAACATTTCCACAGGACTGTACTGAGTTTCAGCTCTGCCACGGACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | CCTGGAAAAAGTCAGGCCGGTCATTGGCAGATCTTTTaGTTGTGTTATAGTGATCCCAGGCTTTCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGKSQAGHWQIF*LCYSDPRLSAA Trigger: TGCTGCTGAAAGCCTGGGATCACTATAACACAACCAAAAGATCTGCCAATGACCGGCCTGACTTTTTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 72 bp | GGAAAAAGTCAGGCCGGTCATTGGCAGATCTTTTGGTaGTGTTATAGTGATCCCAGGCTTTCAGCAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GKSQAGHWQIFW*CYSDPRLSAAR Trigger: CCTTGCTGCTGAAAGCCTGGGATCACTATAACACAACCAAAAGATCTGCCAATGACCGGCCTGACTTTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | CTTTCACAACACGATTCCTTCACATTCTCCCCATCTGTCCCAAACTaGTTCTCTTCTGTGGCCCCTGAGTTCACAAGGCTAAAGAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSQHDSFTFSPSVPN*FSSVAPEFTRLKRD Trigger: ATCTCTCTTTAGCCTTGTGAACTCAGGGGCCACAGAAGAGAACAAGTTTGGGACAGATGGGGAGAATGTGAAGGAATCGTGTTGTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | CTTGTCAGATCAGGGTCCGTTAGTCTGTTTCCCATCTaGTGTCTTCTTTCACAACACGATTCCTTCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: LVRSGSVSLFPI*CLLSQHDSFTF Trigger: GAATGTGAAGGAATCGTGTTGTGAAAGAAGACAGCAGATGGGAAACAGACTAACGGACCCTGATCTGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS GCA 72 bp | ATACACAGAAGAGCATCGAGAAGAAACAGTAAGGTGTaGTCTGTTCTTGATAGGAGGGGTCGAACATTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IHRRASRRNSKV*SVLDRRGRTFR Trigger: TCTGAATGTTCGACCCCTCCTATCAAGAACAGAGCACACCTTACTGTTTCTTCTCGATGCTCTTCTGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | ATGATCTCCGGCAGGATTTCCTCAAAGGTTTTCTGGTaGGACCCATTGACTAAATCTAACCCTTCAATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: MISGRISSKVFW*DPLTKSNPSIA Trigger: TGCTATTGAAGGGTTAGATTTAGTCAATGGGTCCCACCAGAAAACCTTTGAGGAAATCCTGCCGGAGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 72 bp | ATTTTCTTCTTGTGGAAACCGAAGGAGGCTCTGGTTTaGGTCCAAGAATCCCTCTGGCTAGTATTCAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFFLWKPKEALV*VQESLWLVFKF Trigger: GAACTTGAATACTAGCCAGAGGGATTCTTGGACCAAAACCAGAGCCTCCTTCGGTTTCCACAAGAAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | AACTCAAATTCCAGGATAATAAAGAGCTGGTCTTCCTaGAAAAAGTCAGGCCGGTCATTGGCAGATCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NSNSRIIKSWSS*KKSGRSLADLL Trigger: CAAAAGATCTGCCAATGACCGGCCTGACTTTTTCCAGGAAGACCAGCTCTTTATTATCCTGGAATTTGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CAA 90 bp | ATGATCTCCGGCAGGATTTCCTCAAAGGTTTTCTGGTGGGACCCATaGACTAAATCTAACCCTTCAATAGCAATGATTTTTAGGGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: MISGRISSKVFWWDP*TKSNPSIAMIFRAT Trigger: TGTAGCCCTAAAAATCATTGCTATTGAAGGGTTAGATTTAGTCAATGGGTCCCACCAGAAAACCTTTGAGGAAATCCTGCCGGAGATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 72 bp | CATAAACCTTTTCAGCATAAGATGGCCTTTGGTCTGTaGCATGCAGGGTCTTTAAGGGACTTAGCAAATACA | + |
|
Preference number: 6 (lower is better) Translates to: HKPFQHKMAFGL*HAGSLRDLANT Trigger: TGTATTTGCTAAGTCCCTTAAAGACCCTGCATGTCACAGACCAAAGGCCATCTTATGCTGAAAAGGTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS TCA 72 bp | ATTTTTAGGGCTACAGGTGCTTGGTCGTTAATTATCTaGAACACTTCTCCAAACACTCCTTCCCCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFRATGAWSLII*NTSPNTPSPIF Trigger: GAAGATTGGGGAAGGAGTGTTTGGAGAAGTGTTTCAGATAATTAACGACCAAGCACCTGTAGCCCTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||
| CDS CCA 72 bp | ATAATGATCTCCGGCAGGATTTCCTCAAAGGTTTTCTaGTGGGACCCATTGACTAAATCTAACCCTTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: IMISGRISSKVF*WDPLTKSNPSI Trigger: TATTGAAGGGTTAGATTTAGTCAATGGGTCCCACCAGAAAACCTTTGAGGAAATCCTGCCGGAGATCATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052140.3 |
||