Pregenerated sensors for HAS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022367Ensembl transcript IDs: ENSMUST00000050544.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTGTGGTGGCAGGGTGCGGTGCCACAATACTGTATAGCCCCTTaGGGAGCTAAGGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLWWQGAVPQYCIAP*GAKVCVCVYVCVCV Trigger: CACACACACACACACATACACACACACACACACCTTAGCTCCTCAAGGGGCTATACAGTATTGTGGCACCGCACCCTGCCACCACAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 90 bp | TGTGTGTGGTGTGGTAGTCTGCGCAGTGAGGAAGCAGAACCTTGGTaGTCTTTTTGCTTCGCCACAAGGCTTCTGTGCAGCTATTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: CVWCGSLRSEEAEPW*SFCFATRLLCSYSC Trigger: ACAGGAATAGCTGCACAGAAGCCTTGTGGCGAAGCAAAAAGAGCACCAAGGTTCTGCTTCCTCACTGCGCAGACTACCACACCACACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 90 bp | GAAGCAGAACCTTGGTGCTCTTTTTGCTTCGCCACAAGGCTTCTGTaGAGCTATTCCTGTGTTCTGAGTGTCTGTCTCACAGCCCTACAC | + |
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Preference number: 1 (lower is better) Translates to: EAEPWCSFCFATRLL*SYSCVLSVCLTALH Trigger: GTGTAGGGCTGTGAGACAGACACTCAGAACACAGGAATAGCTGCACAGAAGCCTTGTGGCGAAGCAAAAAGAGCACCAAGGTTCTGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR TCA 90 bp | CCATTTTGTCTAGGCCTAGGCAAAGACTGCCACCATCTCTCCAGATaGTCTGGCTTGGATGTTCACATTTATCCAGTACAAGGAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PFCLGLGKDCHHLSR*SGLDVHIYPVQGAQ Trigger: CTGGGCTCCTTGTACTGGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTGCCTAGGCCTAGACAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CCA 90 bp | TTGTCTAGGCCTAGGCAAAGACTGCCACCATCTCTCCAGATGATCTaGCTTGGATGTTCACATTTATCCAGTACAAGGAGCCCAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: LSRPRQRLPPSLQMI*LGCSHLSSTRSPAF Trigger: AAATGCTGGGCTCCTTGTACTGGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTGCCTAGGCCTAGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 90 bp | AAAGCATGGCAAGTGAGGTATTTAGAACAAACACTGTCAGGCAGATaGACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCG | + |
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Preference number: 1 (lower is better) Translates to: KAWQVRYLEQTLSGR*TVREKCISQDIIPP Trigger: CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGACAGTGTTTGTTCTAAATACCTCACTTGCCATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CAA 90 bp | TTCCCACTAGCTCTCCATACGGCGAGAGTCGGAGTTTTTCAGAACTaGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: FPLALHTARVGVFQN*NEPLCTHKVECAAF Trigger: GAAAGCTGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCCGACTCTCGCCGTATGGAGAGCTAGTGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCACCTGTGGTGGCAGGGTaGGGTGCCACAATACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GVFQNLNEPLCTHKVECAPVVAG*GATILY Trigger: ATACAGTATTGTGGCACCGCACCCTGCCACCACAGG...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CAA 90 bp | CCATACGGCGAGAGTCGGAGTTTTTCAGAACTTGAACGAACCTCTTaGTACTCACAAGGTAGAGTGTGCAGCTTTCCCTTAGACAGTATC | + |
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Preference number: 2 (lower is better) Translates to: PYGESRSFSELERTS*YSQGRVCSFPLDSI Trigger: GATACTGTCTAAGGGAAAGCTGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCCGACTCTCGCCGTATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CAA 90 bp | CTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATTTaGTCTAGGCCTAGGCAAAGACTGCCACCATCTCTCCAGATGATC | + |
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Preference number: 2 (lower is better) Translates to: LFVPITQIKSHQLSI*SRPRQRLPPSLQMI Trigger: GATCATCTGGAGAGATGGTGGCAGTCTTTGCCTAGGCCTAGACAAAATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAGCCACAAGGCTTCTGTaGAGCTATTCCTGTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GVFQNLNEPLCTHKVECAATRLL*SYSCVL Trigger: CAGAACACAGGAATAGCTGCACAGAAGCCTTGTGGC...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAACTTTAATGATTGGCTCTTGTACACATGTGAGTATGTATTTTTACCTGTGATATGTCTCCTGTaGTGGCAGGGTGCGGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLNFNDWLLYTCEYVFLPVICLL*WQGAVP Trigger: TGGCACCGCACCCTGCCACCACAGGAGACATATCAC...AGGTAAAAATACATACTCACATGTGTACAAGAGCCAATCATTAAAGTTGAGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAGAGGAAGCAGAACCTTaGTGCTCTTTTTGCTTCGCC | + |
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Preference number: 2 (lower is better) Translates to: GVFQNLNEPLCTHKVECAEEAEP*CSFCFA Trigger: GGCGAAGCAAAAAGAGCACCAAGGTTCTGCTTCCTC...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAACACTGTCAGGCAGATaGACAGTAAGGGAAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: GVFQNLNEPLCTHKVECATLSGR*TVREKC Trigger: GCACTTTTCCCTTACTGTGCATCTGCCTGACAGTGT...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAGAAACCAACCCCCATTaGATGTCTTTGTTCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GVFQNLNEPLCTHKVECAETNPH*MSLFKS Trigger: GGACTTGAACAAAGACATTCAATGGGGGTTGGTTTC...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAAGTCAAATTAACAACTaGGGCCCTGTTACAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: GVFQNLNEPLCTHKVECASQINN*GPVTTE Trigger: TTCAGTTGTAACAGGGCCTCAGTTGTTAATTTGACT...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR TCA 90 bp | AACATAAATGTGCCAGGTCTGAATTGTGTTGTGTATCAGTTACAGTTCGCCCATGGACTTTCTTCTCACTaGTGTATCAATTTGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: NINVPGLNCVVYQLQFAHGLSSH*CINLLW Trigger: CCAAAGCAAATTGATACATCAGTGAGAAGAAAGTCC...ATGGGCGAACTGTAACTGATACACAACACAATTCAGACCTGGCACATTTATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCAACTTTAATGATTGGCTCTTGTACACATGTGAGTATGTATTTTTACCTGAAAGAACGTTCCCTTaGGTTTTCAGAATCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GLNFNDWLLYTCEYVFLPERTFP*VFRILF Trigger: GAAAAGGATTCTGAAAACTCAAGGGAACGTTCTTTC...AGGTAAAAATACATACTCACATGTGTACAAGAGCCAATCATTAAAGTTGAGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCCACCCACACAAAGCATaGCAAGTGAGGTATTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: LPHLGHRVKLLMNCILFVHPHKA*QVRYLE Trigger: TTCTAAATACCTCACTTGCCATGCTTTGTGTGGGTG...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCATACAGCATAGCCAGTaGCTTTCCAACTTTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LPHLGHRVKLLMNCILFVIQHSQ*LSNFPL Trigger: CAAAGGAAAGTTGGAAAGCCACTGGCTATGCTGTAT...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 72 bp | CCCAGCAGCAGTGATATGTCTCCTGTGGTGGCAGGGTaGGGTGCCACAATACTGTATAGCCCCTTGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: PSSSDMSPVVAG*GATILYSPLRS Trigger: GCTCCTCAAGGGGCTATACAGTATTGTGGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 72 bp | TGTGGTAGTCTGCGCAGTGAGGAAGCAGAACCTTGGTaGTCTTTTTGCTTCGCCACAAGGCTTCTGTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: CGSLRSEEAEPW*SFCFATRLLCS Trigger: GCTGCACAGAAGCCTTGTGGCGAAGCAAAAAGAGCACCAAGGTTCTGCTTCCTCACTGCGCAGACTACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CCA 72 bp | TGGTGTGGTAGTCTGCGCAGTGAGGAAGCAGAACCTTaGTGCTCTTTTTGCTTCGCCACAAGGCTTCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: WCGSLRSEEAEP*CSFCFATRLLC Trigger: GCACAGAAGCCTTGTGGCGAAGCAAAAAGAGCACCAAGGTTCTGCTTCCTCACTGCGCAGACTACCACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR TCA 72 bp | TGGCAGGGTGCGGTGCCACAATACTGTATAGCCCCTTaGGGAGCTAAGGTGTGTGTGTGTGTGTATGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: WQGAVPQYCIAP*GAKVCVCVYVC Trigger: ACACACATACACACACACACACACCTTAGCTCCTCAAGGGGCTATACAGTATTGTGGCACCGCACCCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CCA 72 bp | TTTGTTCAAGTCCCAGCAGCAGTGATATGTCTCCTGTaGTGGCAGGGTGCGGTGCCACAATACTGTATAGCC | + |
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Preference number: 3 (lower is better) Translates to: FVQVPAAVICLL*WQGAVPQYCIA Trigger: GGCTATACAGTATTGTGGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGGACTTGAACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 72 bp | CCTTGGTGCTCTTTTTGCTTCGCCACAAGGCTTCTGTaGAGCTATTCCTGTGTTCTGAGTGTCTGTCTCACA | + |
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Preference number: 3 (lower is better) Translates to: PWCSFCFATRLL*SYSCVLSVCLT Trigger: TGTGAGACAGACACTCAGAACACAGGAATAGCTGCACAGAAGCCTTGTGGCGAAGCAAAAAGAGCACCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CCA 72 bp | GCAAAGACTGCCACCATCTCTCCAGATGATCTGGCTTaGATGTTCACATTTATCCAGTACAAGGAGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: AKTATISPDDLA*MFTFIQYKEPS Trigger: GCTGGGCTCCTTGTACTGGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CCA 72 bp | CCTAGGCAAAGACTGCCACCATCTCTCCAGATGATCTaGCTTGGATGTTCACATTTATCCAGTACAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: PRQRLPPSLQMI*LGCSHLSSTRS Trigger: GCTCCTTGTACTGGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTGCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR GCA 72 bp | CAAGTGAGGTATTTAGAACAAACACTGTCAGGCAGATaGACAGTAAGGGAAAAGTGCATAAGCCAAGACATC | + |
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Preference number: 3 (lower is better) Translates to: QVRYLEQTLSGR*TVREKCISQDI Trigger: GATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGACAGTGTTTGTTCTAAATACCTCACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGAACGTTCCCTTGAGTTTTCAGAATCCTTTTCTTCCATGATCACCCACACAAGAAACCAACCCCCATaGAATGTCTTTGTTCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: KERSLEFSESFSSMITHTRNQPP*NVFVQV Trigger: GACTTGAACAAAGACATTCAATGGGGGTTGGTTTCT...TGTGTGGGTGATCATGGAAGAAAAGGATTCTGAAAACTCAAGGGAACGTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR-3UTR CAA 90 bp | AACATAAATGTGCCAGGTCTGAATTGTGTTGTGTATCAGTTACAGTTCGCCCATAAGGAGCCCAGCATTTaGTTTTGCTTTTTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: NINVPGLNCVVYQLQFAHKEPSI*FCFFQR Trigger: TCTTTGGAAAAAGCAAAACAAAATGCTGGGCTCCTT...ATGGGCGAACTGTAACTGATACACAACACAATTCAGACCTGGCACATTTATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | TGTTCAAGTCCCAGCAGCAGTGATATGTCTCCTGTGGTGGCAGGGTGCGGTGCCCACGCTTCGCCCCAGTaGTCTGAAGGCTGTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: CSSPSSSDMSPVVAGCGAHASPQ*SEGCVH Trigger: ATGTACACAGCCTTCAGAGCACTGGGGCGAAGCGTG...GGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGGACTTGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCCCAGCAGCAGTGATATGTCTCCTGTGGTGGCAGGGTGCGGTGCCACAACTCGGAAGTAGGACTTaGTCCAACGGGTCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QVPAAVICLLWWQGAVPQLGSRT*SNGSAG Trigger: ACCAGCAGACCCGTTGGAGCAAGTCCTACTTCCGAG...TTGTGGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGGACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCCCAGCAGCAGTGATATGTCTCCTGTGGTGGCAGGGTGCGGTGCCACAACCAGAGGACCGCTTATaGACTGGACACAGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QVPAAVICLLWWQGAVPQPEDRL*TGHSQN Trigger: ATTTTGGCTGTGTCCAGTGCATAAGCGGTCCTCTGG...TTGTGGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCCCAGCAGCAGTGATATGTCTCCTGTGGTGGCAGGGTGCGGTGCCACAAATGAGACCCACTAGCTaGACAGTTAACAGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QVPAAVICLLWWQGAVPQMRPTS*TVNRKR Trigger: CCTCTTCCTGTTAACTGTCCAGCTAGTGGGTCTCAT...TTGTGGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | TGTTCAAGTCCCAGCAGCAGTGATATGTCTCCTGTGGTGGCAGGGTGCGGTGCCCCAGGTCCCTTTTCATaGAAGTTGTTCTTCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: CSSPSSSDMSPVVAGCGAPGPFS*KLFFQM Trigger: CATCTGGAAGAACAACTTTCATGAAAAGGGACCTGG...GGCACCGCACCCTGCCACCACAGGAGACATATCACTGCTGCTGGGACTTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGCTTTGGATGATGAGATaGGAGGCTAAAAAGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: SGRCTVREKCISQDIIPPLWMMR*EAKKAP Trigger: CGGTGCCTTTTTAGCCTCGCATCTCATCATCCAAAG...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGGCTTGTGAAACCACATaGCATTGTACAGCCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGRCTVREKCISQDIIPPACETT*HCTATL Trigger: GAGAGTGGCTGTACAATGCCATGTGGTTTCACAAGC...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGTTGGGTGACATGTTGTaGACTTTCTTTATGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SGRCTVREKCISQDIIPPLGDML*TFFMGL Trigger: GAGTCCCATAAAGAAAGTTCACAACATGTCACCCAA...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGTTACCCATGAATTCCTaGTTGTACCAGTCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: SGRCTVREKCISQDIIPPLPMNS*LYQSST Trigger: TGTGGAAGACTGGTACAATCAGGAATTCATGGGTAA...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGTGCATTGGTTACCCATaGATTCCTGATTGTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGRCTVREKCISQDIIPPCIGYP*IPDCTS Trigger: ACTGGTACAATCAGGAATTCATGGGTAACCAATGCA...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CAA 72 bp | GCTCTCCATACGGCGAGAGTCGGAGTTTTTCAGAACTaGAACGAACCTCTTTGTACTCACAAGGTAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ALHTARVGVFQN*NEPLCTHKVEC Trigger: ACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCCGACTCTCGCCGTATGGAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | TTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATTTTGTCTAGGCCTACCCTGTTGGTAAGGTaGCTGTCGTCACCAAAACTG | + |
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Preference number: 4 (lower is better) Translates to: FVPITQIKSHQLSILSRPTLLVR*LSSPKL Trigger: CAGTTTTGGTGACGACAGGCACCTTACCAACAGGGT...AGGCCTAGACAAAATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCACTCCAACGGGTCTGCTaGTTCAGCCATCTCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: GVFQNLNEPLCTHKVECALQRVC*FSHLRY Trigger: ATATCTGAGATGGCTGAACCAGCAGACCCGTTGGAG...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | TTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATTTTGTCTAGGCCTCAATATAAGCAGCTGTaGTTCCGAGGAGGAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: FVPITQIKSHQLSILSRPQYKQL*FRGGET Trigger: TGTCTCTCCTCCTCGGAATCACAGCTGCTTATATTG...AGGCCTAGACAAAATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGACCGTACAGTCCAAATaGGAAGTAGTAATTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: SGRCTVREKCISQDIIPPTVQSK*EVVIIC Trigger: ACAGATAATTACTACTTCTCATTTGGACTGTACGGT...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | GAATTGCATTCTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATCACCATCTCCACAGATaGGGCAGGGTCAAGCATAGT | + |
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Preference number: 4 (lower is better) Translates to: ELHSICPNHTDKVSPAFHHHLHR*GRVKHS Trigger: ACTATGCTTGACCCTGCCTCATCTGTGGAGATGGTG...ATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAGAATGCAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | CAAAGACTGCCACCATCTCTCCAGATGATCTGGCTTGGATGTTCACATTTATCCTCAAAGTTCCCACGATaGGAACAGTCTGTTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: QRLPPSLQMIWLGCSHLSSKFPR*EQSVWI Trigger: AATCCAAACAGACTGTTCTCATCGTGGGAACTTTGA...GGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CAA 72 bp | GAGAGTCGGAGTTTTTCAGAACTTGAACGAACCTCTTaGTACTCACAAGGTAGAGTGTGCAGCTTTCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: ESRSFSELERTS*YSQGRVCSFPL Trigger: TAAGGGAAAGCTGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCCGACTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | GAATTGCATTCTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATAGTATCTCACGCTGCTaGGGAAGGAGATCCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: ELHSICPNHTDKVSPAFHSISRC*GRRSRN Trigger: ATTCCTGGATCTCCTTCCTCAGCAGCGTGAGATACT...ATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAGAATGCAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCTTGCTCCAACGGGTCTaGTGGTTCAGCCATCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LPHLGHRVKLLMNCILFVLLQRV*WFSHLR Trigger: TCTGAGATGGCTGAACCAGCAGACCCGTTGGAGCAA...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGCCACCATCTCTCCAGATGATCTGGCTTGGATGTTCACATTTATCCTACTTGTTTAAAATCTaGACATCTCCTCCAACACCT | + |
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Preference number: 4 (lower is better) Translates to: QRLPPSLQMIWLGCSHLSYLFKI*TSPPTP Trigger: AGGTGTTGGAGGAGATGTCCAGATTTTAAACAAGTA...GGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | CAAAGACTGCCACCATCTCTCCAGATGATCTGGCTTGGATGTTCACATTTATCCAAACCACACGGACACTaGAATAAGTCCTATGAAATT | + |
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Preference number: 4 (lower is better) Translates to: QRLPPSLQMIWLGCSHLSKPHGH*NKSYEI Trigger: AATTTCATAGGACTTATTCCAGTGTCCGTGTGGTTT...GGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | GAATTGCATTCTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATAGAGAGTCAAAAGCATaGCCCAGTAGCATGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: ELHSICPNHTDKVSPAFHRESKA*PSSMHR Trigger: TCTATGCATGCTACTGGGTCATGCTTTTGACTCTCT...ATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAGAATGCAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCAACTTTAATGATTGGCTCTTGTACACATGTGAGTATGTATTTTTACCTCATGACCCAGTAGCATaGATAGATCAAAGTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GLNFNDWLLYTCEYVFLPHDPVA*IDQSSH Trigger: GTGGGAACTTTGATCTATGCATGCTACTGGGTCATG...AGGTAAAAATACATACTCACATGTGTACAAGAGCCAATCATTAAAGTTGAGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACGTTCCCTTGAGTTTTCAGAATCCTTTTCTTCCATGATCACCCACACATGTGAACTTTCTTTATaGGACTCTTCTGTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: KERSLEFSESFSSMITHTCELSL*DSSVSP Trigger: TGGTGAGACAGAAGAGTCCCATAAAGAAAGTTCACA...TGTGTGGGTGATCATGGAAGAAAAGGATTCTGAAAACTCAAGGGAACGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACGTTCCCTTGAGTTTTCAGAATCCTTTTCTTCCATGATCACCCACACACAATTGCAAACATCTTaGCAGGAAGTAGACTTGACA | + |
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Preference number: 4 (lower is better) Translates to: KERSLEFSESFSSMITHTQLQTS*QEVDLT Trigger: TGTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTG...TGTGTGGGTGATCATGGAAGAAAAGGATTCTGAAAACTCAAGGGAACGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | GAATTGCATTCTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATGTTTATGGTTGCAATTaGAAACATCTTGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELHSICPNHTDKVSPAFHVYGCN*KHLGRK Trigger: CTTCCTGCCAAGATGTTTGCAATTGCAACCATAAAC...ATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAGAATGCAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR TCA 90 bp | GGCCTCAACTTTAATGATTGGCTCTTGTACACATGTGAGTATGTATTTTTACCTACAAGACCAATTGGGTaGCATGTTGTGAACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLNFNDWLLYTCEYVFLPTRPIG*HVVNFL Trigger: AAGAAAGTTCACAACATGTCACCCAATTGGTCTTGT...AGGTAAAAATACATACTCACATGTGTACAAGAGCCAATCATTAAAGTTGAGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR GCA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCTCTTCCACAAATTCATaGAGCAAGGAGTTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPHLGHRVKLLMNCILFVSSTNS*SKEFLY Trigger: GTACAGAAACTCCTTGCTGCATGAATTTGTGGAAGA...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| 3UTR CAA 72 bp | TTCTACCCTTTCGGCCTCAACTTTAATGATTGGCTCTaGTACACATGTGAGTATGTATTTTTACCTAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FYPFGLNFNDWL*YTCEYVFLPKS Trigger: ACTTTTAGGTAAAAATACATACTCACATGTGTACAAGAGCCAATCATTAAAGTTGAGGCCGAAAGGGTAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGGTAGTCAGGGTCCTCTaGGTACGCAGCGATGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SGRCTVREKCISQDIIPPVVRVL*VRSDAE Trigger: CTCTGCATCGCTGCGTACCAAGAGGACCCTGACTAC...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS TCA 90 bp | GCCCATAACTTCGCTGAATATGTCCATCATGTAAAGGTCGTCGTCTaGGTTCCCATCGATGACCATCACGACTTTAATCCCAGGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AHNFAEYVHHVKVVV*VPIDDHHDFNPRVG Trigger: ACCTACCCTGGGATTAAAGTCGTGATGGTCATCGATGGGAACTCAGACGACGACCTTTACATGATGGACATATTCAGCGAAGTTATGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | TTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATTTTGTCTAGGCCTAGACTCAACACCCTGTaGGTAAGGTGCCTGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FVPITQIKSHQLSILSRPRLNTL*VRCLSS Trigger: TGACGACAGGCACCTTACCAACAGGGTGTTGAGTCT...AGGCCTAGACAAAATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS TCA 90 bp | AGGTGCCTGTCGTCACCAAAACTGCATTGGTTACCCATGAATTCCTaGTTGTACCAGTCTTCCACAAATTCATGCAGCAAGGAGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLSSPKLHWLPMNS*LYQSSTNSCSKEFL Trigger: CAGAAACTCCTTGCTGCATGAATTTGTGGAAGACTGGTACAATCAGGAATTCATGGGTAACCAATGCAGTTTTGGTGACGACAGGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CCA 90 bp | CAACAATGGTCTTCCTTCCAGATGTGCCCCACCCAGCTTTGTTTATaGTTGCAATTGCAAACATCTTGGCAGGAAGTAGACTTGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: QQWSSFQMCPTQLCL*LQLQTSWQEVDLTC Trigger: ACATGTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTGCAACCATAAACAAAGCTGGGTGGGGCACATCTGGAAGGAAGACCATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | GGAGTTTTTCAGAACTTGAACGAACCTCTTTGTACTCACAAGGTAGAGTGTGCAAAAGGCAAAGAGGCTTaGGATGATGAGATGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVFQNLNEPLCTHKVECAKGKEA*DDEMRG Trigger: GCCTCGCATCTCATCATCCAAAGCCTCTTTGCCTTT...TGCACACTCTACCTTGTGAGTACAAAGAGGTTCGTTCAAGTTCTGAAAAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | TCAGGCAGATGCACAGTAAGGGAAAAGTGCATAAGCCAAGACATCATCCCACCGTGGCAGGAAGTAGACTaGACATGTATAACACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGRCTVREKCISQDIIPPWQEVD*TCITLN Trigger: ATTCAGTGTTATACATGTCAAGTCTACTTCCTGCCA...CGGTGGGATGATGTCTTGGCTTATGCACTTTTCCCTTACTGTGCATCTGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | GAATTGCATTCTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATCTGGCAAAAGATGACTaGATGAGACCCACTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELHSICPNHTDKVSPAFHLAKDD*MRPTSW Trigger: CCAGCTAGTGGGTCTCATCAAGTCATCTTTTGCCAG...ATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAGAATGCAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | GAATTGCATTCTATTTGTCCCAATCACACAGATAAAGTCTCACCAGCTTTCCATGTGCCCCACCCAGCTTaGTTTATGGTTGCAATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELHSICPNHTDKVSPAFHVPHPA*FMVAIA Trigger: TGCAATTGCAACCATAAACAAAGCTGGGTGGGGCAC...ATGGAAAGCTGGTGAGACTTTATCTGTGTGATTGGGACAAATAGAATGCAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCCACCATGTCATACTGTaGTCCCTTCTTCCGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPHLGHRVKLLMNCILFVHHVIL*SLLPPA Trigger: GGCAGGCGGAAGAAGGGACAACAGTATGACATGGTG...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS GCA 90 bp | ATTGATGAGAACCACATAGAGAGTCAAAAGCATGACCCAGTAGCATaGATAGATCAAAGTTCCCACGATGAGAACAGTCTGTTTGGATTC | + |
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Preference number: 5 (lower is better) Translates to: IDENHIESQKHDPVA*IDQSSHDENSLFGF Trigger: GAATCCAAACAGACTGTTCTCATCGTGGGAACTTTGATCTATGCATGCTACTGGGTCATGCTTTTGACTCTCTATGTGGTTCTCATCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CCA 90 bp | ATGTGCCCCACCCAGCTTTGTTTATGGTTGCAATTGCAAACATCTTaGCAGGAAGTAGACTTGACATGTATAACACTGAATACAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: MCPTQLCLWLQLQTS*QEVDLTCITLNTET Trigger: TGTCTCTGTATTCAGTGTTATACATGTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTGCAACCATAAACAAAGCTGGGTGGGGCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | CAAAGACTGCCACCATCTCTCCAGATGATCTGGCTTGGATGTTCACATTTATCCGTAGTAATTATCTGTTaGGATAAACTGGTAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QRLPPSLQMIWLGCSHLSVVIIC*DKLVAN Trigger: GTTGGCTACCAGTTTATCCAAACAGATAATTACTAC...GGATAAATGTGAACATCCAAGCCAGATCATCTGGAGAGATGGTGGCAGTCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCGTTTCAGTAAGGCACTaGGACCGAGCCGTGTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LPHLGHRVKLLMNCILFVVSVRH*DRAVYL Trigger: TAAATACACGGCTCGGTCCAAGTGCCTTACTGAAAC...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS-3UTR CAA 90 bp | CTGCCACATTTAGGCCACAGAGTAAAACTTTTAATGAATTGCATTCTATTTGTCGCAATTGCAAACATCTaGGCAGGAAGTAGACTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPHLGHRVKLLMNCILFVAIANI*AGSRLD Trigger: GTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTGC...GACAAATAGAATGCAATTCATTAAAAGTTTTACTCTGTGGCCTAAATGTGGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 72 bp | TCCTCTTGGTACGCAGCGATGCAGAGTGCTACCGTTTaGTTCAATTTAATCGGGGTTTCAAGGGACTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSWYAAMQSATV*FNLIGVSRDFF Trigger: GAAGAAGTCCCTTGAAACCCCGATTAAATTGAACAAAACGGTAGCACTCTGCATCGCTGCGTACCAAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 90 bp | ACTCAACACCCTGTTGGTAAGGTGCCTGTCGTCACCAAAACTGCATaGGTTACCCATGAATTCCTGATTGTACCAGTCTTCCACAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: TQHPVGKVPVVTKTA*VTHEFLIVPVFHKF Trigger: GAATTTGTGGAAGACTGGTACAATCAGGAATTCATGGGTAACCAATGCAGTTTTGGTGACGACAGGCACCTTACCAACAGGGTGTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS TCA 72 bp | TTCGCTGAATATGTCCATCATGTAAAGGTCGTCGTCTaGGTTCCCATCGATGACCATCACGACTTTAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: FAEYVHHVKVVV*VPIDDHHDFNP Trigger: GGGATTAAAGTCGTGATGGTCATCGATGGGAACTCAGACGACGACCTTTACATGATGGACATATTCAGCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS GCA 72 bp | TGTTCCAAAAAGGCAAAGAGGCTTTGGATGATGAGATaGGAGGCTAAAAAGGCACCGTACAGTCCAAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSKKAKRLWMMR*EAKKAPYSPNE Trigger: CTCATTTGGACTGTACGGTGCCTTTTTAGCCTCGCATCTCATCATCCAAAGCCTCTTTGCCTTTTTGGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 72 bp | ACGATATTTCCTCTAAGGCAGCTGGCAAAAGATGACTaGATGAGACCCACTAGCTGGACAGTTAACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TIFPLRQLAKDD*MRPTSWTVNRK Trigger: CTTCCTGTTAACTGTCCAGCTAGTGGGTCTCATCAAGTCATCTTTTGCCAGCTGCCTTAGAGGAAATATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS TCA 72 bp | GGTGCCTGTCGTCACCAAAACTGCATTGGTTACCCATaGATTCCTGATTGTACCAGTCTTCCACAAATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GACRHQNCIGYP*IPDCTSLPQIH Trigger: ATGAATTTGTGGAAGACTGGTACAATCAGGAATTCATGGGTAACCAATGCAGTTTTGGTGACGACAGGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 90 bp | GATGTGCCCCACCCAGCTTTGTTTATGGTTGCAATTGCAAACATCTaGGCAGGAAGTAGACTTGACATGTATAACACTGAATACAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DVPHPALFMVAIANI*AGSRLDMYNTEYRD Trigger: GTCTCTGTATTCAGTGTTATACATGTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTGCAACCATAAACAAAGCTGGGTGGGGCACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 90 bp | AAATTAACAACAATGGTCTTCCTTCCAGATGTGCCCCACCCAGCTTaGTTTATGGTTGCAATTGCAAACATCTTGGCAGGAAGTAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: KLTTMVFLPDVPHPA*FMVAIANILAGSRL Trigger: AAGTCTACTTCCTGCCAAGATGTTTGCAATTGCAACCATAAACAAAGCTGGGTGGGGCACATCTGGAAGGAAGACCATTGTTGTTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 72 bp | CACCCAGCTTTGTTTATGGTTGCAATTGCAAACATCTaGGCAGGAAGTAGACTTGACATGTATAACACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HPALFMVAIANI*AGSRLDMYNTE Trigger: TTCAGTGTTATACATGTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTGCAACCATAAACAAAGCTGGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CCA 72 bp | ACCCAGCTTTGTTTATGGTTGCAATTGCAAACATCTTaGCAGGAAGTAGACTTGACATGTATAACACTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TQLCLWLQLQTS*QEVDLTCITLN Trigger: ATTCAGTGTTATACATGTCAAGTCTACTTCCTGCCAAGATGTTTGCAATTGCAACCATAAACAAAGCTGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 72 bp | CTCTTTCCACCCCATTTTTGCATGATGCAAATACTTTaGTTAGACAAGACCAATTGGGTGACATGTTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LFPPHFCMMQIL*LDKTNWVTCCE Trigger: TTCACAACATGTCACCCAATTGGTCTTGTCTAACAAAAGTATTTGCATCATGCAAAAATGGGGTGGAAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CCA 72 bp | TGCATGATGCAAATACTTTTGTTAGACAAGACCAATTaGGTGACATGTTGTGAACTTTCTTTATGGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CMMQILLLDKTN*VTCCELSLWDS Trigger: AGAGTCCCATAAAGAAAGTTCACAACATGTCACCCAATTGGTCTTGTCTAACAAAAGTATTTGCATCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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| CDS CAA 90 bp | ATGACTTCTCTCTTTCCACCCCATTTTTGCATGATGCAAATACTTTaGTTAGACAAGACCAATTGGGTGACATGTTGTGAACTTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: MTSLFPPHFCMMQIL*LDKTNWVTCCELSL Trigger: TAAAGAAAGTTCACAACATGTCACCCAATTGGTCTTGTCTAACAAAAGTATTTGCATCATGCAAAAATGGGGTGGAAAGAGAGAAGTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050544.8 |
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