Pregenerated sensors for HAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003665Ensembl transcript IDs: ENSMUST00000003762.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCCTCCCCAGAGTCCCCAGAAAGCCATaGCTCCAGGGGGTGCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LALVLQSHSLINKLPLPRVPRKP*LQGVPH Trigger: GTGAGGCACCCCCTGGAGTCATGGCTTTCTGGGGAC...TCTGGGGAGGGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCTTGCCGCCCCAACGCTaGGCCACGCACACGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDVLALVLQSHSLINKLPLPPQR*ATHTHL Trigger: CAGGTGCGTGTGCGTGGCTCAGCGTTGGGGCGGCAA...GGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCCCACGCACACGCACCTaGGTGTTCTCACCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNREKMETFWPWSYNPTPPRTRT*VFSPAP Trigger: AGGCGCTGGTGAGAACACGCAGGTGCGTGTGCGTGG...GGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTCCTGGGCCACACTaGGGGCCAGGCCTCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IATGRKWRRSGPGPTIPLPPGPH*GPGLQA Trigger: TGCTTGGAGGCCTGGCCCGCAGTGTGGCCCAGGAGG...GAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCCTCCCCAGAGCAACGCGCTGCCTCTaGGGGCTTTGGCATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LALVLQSHSLINKLPLPRATRCL*GLWHVL Trigger: CAGGACATGCCAAAGCCCTCAGAGGCAGCGCGTTGC...TCTGGGGAGGGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGAAGGTAAACTGAGTCCCCAGAAAGCCATGACTCCAGGGGGTGCCTCAGGTAGGCTGAGATGGTaGGTGCCACGCTGCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QREGKLSPQKAMTPGGASGRLRW*VPRCVQ Trigger: CTGCACGCAGCGTGGCACTCACCATCTCAGCCTACC...TGAGGCACCCCCTGGAGTCATGGCTTTCTGGGGACTCAGTTTACCTTCTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGAAGGTAAACTGAGTCCCCAGAAAGCCATGACTCCAGGGGGTGCCTCAGCCAGTGCTACGCCCTaGACACAGAGCAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QREGKLSPQKAMTPGGASASATP*TQSSTQ Trigger: CTGGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGC...TGAGGCACCCCCTGGAGTCATGGCTTTCTGGGGACTCAGTTTACCTTCTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | GCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTCCAGGCTGCAAAGGCTaGCTTTGCCAGTGCTACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATGRKWRRSGPGPTIPLPPGCKG*LCQCYA Trigger: GGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGG...AGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCCTCCCCAGAGCCCGTAGCCTCCGCTaGTTCCCAGGGCTGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LALVLQSHSLINKLPLPRARSLR*FPGLMV Trigger: TACCATCAGCCCTGGGAACCAGCGGAGGCTACGGGC...TCTGGGGAGGGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | GGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCAGCCAGAGGAACGCCTaGGGCGTAGGCCCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDVLALVLQSHSLINKLPSQRNA*GVGPGH Trigger: ATGACCTGGGCCTACGCCGCAGGCGTTCCTCTGGCT...GGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | GCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTATCCTCTTGGTAGGCTaGGATGGTGAGTGCCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATGRKWRRSGPGPTIPLPILLVG*DGECHA Trigger: AGCGTGGCACTCACCATCTCAGCCTACCAAGAGGAT...AGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCCTCCCCAGAGACTGCTCAAGAAGCTaGCCCAGGAGTCCAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LALVLQSHSLINKLPLPRDCSRS*PRSPEG Trigger: ACCCTCTGGACTCCTGGGTCAGCTTCTTGAGCAGTC...TCTGGGGAGGGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTATCAGCTCTGGCCTCCTaGGCCACACTGCGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGDVLALVLQSHSLINKLSALAS*ATLRAR Trigger: CCTGGCCCGCAGTGTGGCCCAGGAGGCCAGAGCTGA...TAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCACTCCAGTCAGCTCTaGCCTCCTGGGCCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSNREKMETFWPWSYNPTHSSQL*PPGPHC Trigger: GCAGTGTGGCCCAGGAGGCCAGAGCTGACTGGAGTG...AGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | AATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTGAGTGGTGCATAGAGTaGCAGCAGCACCATGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSNREKMETFWPWSYNPTEWCIE*QQHHAH Trigger: GTGCGCATGGTGCTGCTGTCACTCTATGCACCACTC...AGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTCAAAGAGAAGGTAAACTGAGTCCCCAGAAAGCCATGACTCCAGGGGGTGGCTGCCTTTGCCAGTaGTACGCCCTGCACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFQREGKLSPQKAMTPGGGCLCQ*YALHTE Trigger: CTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCC...ACCCCCTGGAGTCATGGCTTTCTGGGGACTCAGTTTACCTTCTCTTTGAAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTAGCCACGCAGCCAGGCTaGAAAGGCTGCCTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGDVLALVLQSHSLINKLATQPG*KGCLCQ Trigger: CTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGC...TAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCATCCCACACATAAGTaGCGGGGTCCTCATCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSNREKMETFWPWSYNPTHPTHK*RGPHRR Trigger: TCGCCGATGAGGACCCCGCCACTTATGTGTGGGATG...AGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCGCTCCAGCAGTGCCATaGGGTCTAGTCTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IATGRKWRRSGPGPTIPLAPAVP*GLVLCL Trigger: CAGACACAAGACTAGACCCCATGGCACTGCTGGAGC...GAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCCTCCCCAGATCCCCAAATGTGCAGTaGGTGCCCAGGAACTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LALVLQSHSLINKLPLPRSPNVQ*VPRNFW Trigger: CCAAAAGTTCCTGGGCACCCACTGCACATTTGGGGA...TCTGGGGAGGGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | AGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCGTACCCCAACCACTTTaGTTCATGGTAACCAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNREKMETFWPWSYNPTPVPQPL*FMVTNA Trigger: AGCGTTGGTTACCATGAATCAAAGTGGTTGGGGTAC...GGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTCAAAGAGAAGGTAAACTGAGTCCCCAGAAAGCCATGACTCCAGGGGGTTTCAGCTGCTCGGGATaGGCCACTCCAGTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFQREGKLSPQKAMTPGGFSCSG*ATPVSS Trigger: AGAGCTGACTGGAGTGGCCCATCCCGAGCAGCTGAA...ACCCCCTGGAGTCATGGCTTTCTGGGGACTCAGTTTACCTTCTCTTTGAAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | AATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCAGGCCTCCAAGAACTaGTGCAGGAGATTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSNREKMETFWPWSYNPTQASKN*CRRLFL Trigger: CAGAAACAATCTCCTGCAGCAGTTCTTGGAGGCCTG...AGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTAGTGCCCAGGAACTTTTaGTTGTACCAGGCCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGDVLALVLQSHSLINKLVPRNF*LYQASK Trigger: CTTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCAC...TAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTCAAAGAGAAGGTAAACTGAGTCCCCAGAAAGCCATGACTCCAGGGGGTAAGCTCGTTCCACATTaGAGGCTACCCAGTATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFQREGKLSPQKAMTPGGKLVPH*RLPSIE Trigger: TTCGATACTGGGTAGCCTTCAATGTGGAACGAGCTT...ACCCCCTGGAGTCATGGCTTTCTGGGGACTCAGTTTACCTTCTCTTTGAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGATCAATAAATTACCCCTCCCCAGAGACCTAGATCTGAGTTCCAATACACACGGAGTCGCCCAGTaGCTTGAAAGCTGTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLINKLPLPRDLDLSSNTHGVAQ*LESCVH Trigger: ATGTACACAGCTTTCAAGGCACTGGGCGACTCCGTG...TGTATTGGAACTCAGATCTAGGTCTCTGGGGAGGGGTAATTTATTGATCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | GGCCGCATCCAGGGGCCCCTTCGCCAAGGAGCGCCGCGCAGCCGCTaGCACCCTTCGGTGCTCCAGGTAAGCGAAGAGGCTCTGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRIQGPLRQGAPRSR*HPSVLQVSEEALCH Trigger: GTGGCACAGAGCCTCTTCGCTTACCTGGAGCACCGAAGGGTGGCAGCGGCTGCGCGGCGCTCCTTGGCGAAGGGGCCCCTGGATGCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 90 bp | GGCACCAGCCCCAGCAGCAAGGTGGTAGGCTTCAGCTGCTCGGGATaGGCCACTCCAGTCAGCTCTGGCCTCCTGGGCCACACTGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTSPSSKVVGFSCSG*ATPVSSGLLGHTAG Trigger: GCCCGCAGTGTGGCCCAGGAGGCCAGAGCTGACTGGAGTGGCCCATCCCGAGCAGCTGAAGCCTACCACCTTGCTGCTGGGGCTGGTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | GCGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTGCCTTTGCCAGTaGTACGCCCTGCACACAGAGCAGCACCCAGAGCAGAGCCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: AHAATQPGCKGCLCQ*YALHTEQHPEQSPR Trigger: CCGTGGGCTCTGCTCTGGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | GGCCACATAGGCACCAGCCCCAGCAGCAAGGTGGTAGGCTTCAGCTaGTCGGGATGGGCCACTCCAGTCAGCTCTGGCCTCCTGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHIGTSPSSKVVGFS*SGWATPVSSGLLGH Trigger: GTGGCCCAGGAGGCCAGAGCTGACTGGAGTGGCCCATCCCGAGCAGCTGAAGCCTACCACCTTGCTGCTGGGGCTGGTGCCTATGTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 90 bp | AGCACTGGCGCAGGTAAGCGGGATCCTCTTGGTAGGCTGAGATGGTaGGTGCCACGCTGCGTGCAGTGGCCGCATCCAGGGGCCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: STGAGKRDPLGRLRW*VPRCVQWPHPGAPS Trigger: CGAAGGGGCCCCTGGATGCGGCCACTGCACGCAGCGTGGCACTCACCATCTCAGCCTACCAAGAGGATCCCGCTTACCTGCGCCAGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | CACCATGCGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTGCCTTTaGCAGTGCTACGCCCTGCACACAGAGCAGCACCCAGAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HHAHAATQPGCKGCL*QCYALHTEQHPEQS Trigger: GCTCTGCTCTGGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | CAGCAGCACCATGCGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTaGCTTTGCCAGTGCTACGCCCTGCACACAGAGCAGCACCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QQHHAHAATQPGCKG*LCQCYALHTEQHPE Trigger: CTCTGGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTGCTGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 90 bp | GGAGGTCAAGCACTGGCGCAGGTAAGCGGGATCCTCTTGGTAGGCTaGGATGGTGAGTGCCACGCTGCGTGCAGTGGCCGCATCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGQALAQVSGILLVG*DGECHAACSGRIQG Trigger: CCCCTGGATGCGGCCACTGCACGCAGCGTGGCACTCACCATCTCAGCCTACCAAGAGGATCCCGCTTACCTGCGCCAGTGCTTGACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | GCCCTGCACACAGAGCAGCACCCAGAGCAGAGCCCACGGGCGCCCTaGATAGAAGAGCCTCAACACCGTGGCAGCCACGAAGAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALHTEQHPEQSPRAP*IEEPQHRGSHEERE Trigger: TTCCCTTTCTTCGTGGCTGCCACGGTGTTGAGGCTCTTCTATGCAGGGCGCCCGTGGGCTCTGCTCTGGGTGCTGCTCTGTGTGCAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 90 bp | CACCTCCCGGTAGGCACCTTCACCGACAGCGCCCGTAGCCTCCGCTaGTTCCCAGGGCTGATGGTAGTTGCCATCCCACACATAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLPVGTFTDSARSLR*FPGLMVVAIPHISG Trigger: GCCACTTATGTGTGGGATGGCAACTACCATCAGCCCTGGGAACCAGCGGAGGCTACGGGCGCTGTCGGTGAAGGTGCCTACCGGGAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 90 bp | GAGGAATGCCCCATAGAGGCCAAAGGCCAGGAGTCCATAGCGATCTaGAGCCAGAGGAACGCCTGCGGCGTAGGCCCAGGTCATGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EECPIEAKGQESIAI*SQRNACGVGPGHEA Trigger: GGCCTCATGACCTGGGCCTACGCCGCAGGCGTTCCTCTGGCTTCAGATCGCTATGGACTCCTGGCCTTTGGCCTCTATGGGGCATTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | GGAGGCCGCACATGTAGAGTGGTGCATAGAGTGACAGCAGCACCATaGGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTGCCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRTCRVVHRVTAAP*ARSHAARLQRLPLP Trigger: TGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTGCTGCTGTCACTCTATGCACCACTCTACATGTGCGGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 90 bp | AGAGCAGAGCCCACGGGCGCCCTGCATAGAAGAGCCTCAACACCGTaGCAGCCACGAAGAAAGGGAAGAGGCCCGAGACCACCGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAEPTGALHRRASTP*QPRRKGRGPRPPLH Trigger: ATGAAGCGGTGGTCTCGGGCCTCTTCCCTTTCTTCGTGGCTGCCACGGTGTTGAGGCTCTTCTATGCAGGGCGCCCGTGGGCTCTGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 90 bp | GAATTTGGCAGGCAGGAGGCCGCACATGTAGAGTGGTGCATAGAGTaGCAGCAGCACCATGCGCACGCAGCCACGCAGCCAGGCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EFGRQEAAHVEWCIE*QQHHAHAATQPGCK Trigger: TTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTGCTGCTGTCACTCTATGCACCACTCTACATGTGCGGCCTCCTGCCTGCCAAATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 90 bp | CCCGGGGGTCTTCATCCAACACTCGCACAAGCTCCAGCAGTGCCATaGGGTCTAGTCTTGTGTCTGAGTCACAGACCTGCACGTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGGLHPTLAQAPAVP*GLVLCLSHRPARSP Trigger: TGGACTACGTGCAGGTCTGTGACTCAGACACAAGACTAGACCCCATGGCACTGCTGGAGCTTGTGCGAGTGTTGGATGAAGACCCCCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCAGATCCTCAGCGCGGTaGCCGTCCACCACCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDVLALVLQSHSLINKLPRSSAR*PSTTMS Trigger: GCTCATGGTGGTGGACGGCAACCGCGCTGAGGATCT...GGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | AGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCGGTGCCCAGGAACTTTaGGTTGTACCAGGCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SNREKMETFWPWSYNPTPGAQEL*VVPGLQ Trigger: TTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCACC...GGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGAGAAGGTAAACTGAGTCCCCAGAAAGCCATGACTCCAGGGGGTGCCTCACCCAGGAACTTTTGGTaGTACCAGGCCTCCAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QREGKLSPQKAMTPGGASPRNFW*YQASKN Trigger: GTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGG...TGAGGCACCCCCTGGAGTCATGGCTTTCTGGGGACTCAGTTTACCTTCTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | TGGGTGCCCAGGAACTTTTGGTTGTACCAGGCCTCCAAGAACTGCTaGAGGAGATTGTTTCTGTATAGACCCAGAGGACCACTGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WVPRNFWLYQASKNC*RRLFLYRPRGPLMQ Trigger: CTGCATCAGTGGTCCTCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 90 bp | CAGTGGGTGCCCAGGAACTTTTGGTTGTACCAGGCCTCCAAGAACTaGTGCAGGAGATTGTTTCTGTATAGACCCAGAGGACCACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QWVPRNFWLYQASKN*CRRLFLYRPRGPLM Trigger: CATCAGTGGTCCTCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCACCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTACCCCTCCCCAGACAAGCTCGTTCCACATaGAAGGCTACCCAGTATCGA | + |
|
Preference number: 5 (lower is better) Translates to: LALVLQSHSLINKLPLPRQARST*KATQYR Trigger: TCGATACTGGGTAGCCTTCAATGTGGAACGAGCTTG...TCTGGGGAGGGGTAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | ATAGCAACAGGGAGAAAATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCTGCCACCACAGAGCATaGTATAGCCACTCTCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IATGRKWRRSGPGPTIPLCHHRA*YSHSRK Trigger: CTTCCGAGAGTGGCTATACAATGCTCTGTGGTGGCA...GAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATTTTCTCCCTGTTGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACGTTCTGGCCCTGGTCCTACAATCCCACTCCCTGATCAATAAATTAACCAACGCTAGGAATTaGGCAGGCAGGAGGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NGDVLALVLQSHSLINKLTNARN*AGRRPH Trigger: GTGCGGCCTCCTGCCTGCCAAATTCCTAGCGTTGGT...TAATTTATTGATCAGGGAGTGGGATTGTAGGACCAGGGCCAGAACGTCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATCAATAAATTACCCCTCCCCAGAGACCTAGATCTGAGTTCCAATACACCATGGGGTCTAGTCTaGTGTCTGAGTCACAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLINKLPLPRDLDLSSNTPWGLV*CLSHRP Trigger: AGGTCTGTGACTCAGACACAAGACTAGACCCCATGG...TGTATTGGAACTCAGATCTAGGTCTCTGGGGAGGGGTAATTTATTGATCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATCAATAAATTACCCCTCCCCAGAGACCTAGATCTGAGTTCCAATACAAACTGCTGCAGGAGATaGTTTCTGTATAGACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLINKLPLPRDLDLSSNTNCCRR*FLYRPR Trigger: TCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTT...TGTATTGGAACTCAGATCTAGGTCTCTGGGGAGGGGTAATTTATTGATCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | CAGGGGCCCCTTCGCCAAGGAGCGCCGCGCAGCCGCTaGCACCCTTCGGTGCTCCAGGTAAGCGAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGPLRQGAPRSR*HPSVLQVSEEA Trigger: AGCCTCTTCGCTTACCTGGAGCACCGAAGGGTGGCAGCGGCTGCGCGGCGCTCCTTGGCGAAGGGGCCCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | GTTTGCCGCCCCAACGCTGAGCCACGCACACGCACCTaGGTGTTCTCACCAGCGCCTCCACCGCCAACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VCRPNAEPRTRT*VFSPAPPPPTA Trigger: GGCGGTTGGCGGTGGAGGCGCTGGTGAGAACACGCAGGTGCGTGTGCGTGGCTCAGCGTTGGGGCGGCAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | CTTCAGCTGCTCGGGATGGGCCACTCCAGTCAGCTCTaGCCTCCTGGGCCACACTGCGGGCCAGGCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQLLGMGHSSQL*PPGPHCGPGLQ Trigger: TTGGAGGCCTGGCCCGCAGTGTGGCCCAGGAGGCCAGAGCTGACTGGAGTGGCCCATCCCGAGCAGCTGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | GGCACCAGCCCCAGCAGCAAGGTGGTAGGCTTCAGCTaGTCGGGATGGGCCACTCCAGTCAGCTCTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSPSSKVVGFS*SGWATPVSSGL Trigger: GAGGCCAGAGCTGACTGGAGTGGCCCATCCCGAGCAGCTGAAGCCTACCACCTTGCTGCTGGGGCTGGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | CCCAGCAGCAAGGTGGTAGGCTTCAGCTGCTCGGGATaGGCCACTCCAGTCAGCTCTGGCCTCCTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSKVVGFSCSG*ATPVSSGLLGH Trigger: GTGGCCCAGGAGGCCAGAGCTGACTGGAGTGGCCCATCCCGAGCAGCTGAAGCCTACCACCTTGCTGCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 72 bp | GCACGCAGCCACGCAGCCAGGCTGCAAAGGCTGCCTTaGCCAGTGCTACGCCCTGCACACAGAGCAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: ARSHAARLQRLP*PVLRPAHRAAP Trigger: GGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 90 bp | GCACCATGCGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTGCCTTaGCCAGTGCTACGCCCTGCACACAGAGCAGCACCCAGAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APCARSHAARLQRLP*PVLRPAHRAAPRAE Trigger: CTCTGCTCTGGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 72 bp | GCACTGGCGCAGGTAAGCGGGATCCTCTTGGTAGGCTaGGATGGTGAGTGCCACGCTGCGTGCAGTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALAQVSGILLVG*DGECHAACSGR Trigger: GCGGCCACTGCACGCAGCGTGGCACTCACCATCTCAGCCTACCAAGAGGATCCCGCTTACCTGCGCCAGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | TTGCCGTCCACCACCATGAGCACGCGTAACCTCGTGTaGGGGTACAGCAAGGCGCGCGCGGAGGTCAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPSTTMSTRNLV*GYSKARAEVKH Trigger: GTGCTTGACCTCCGCGCGCGCCTTGCTGTACCCGCACACGAGGTTACGCGTGCTCATGGTGGTGGACGGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | GCCACGCAGCCAGGCTGCAAAGGCTGCCTTTGCCAGTaGTACGCCCTGCACACAGAGCAGCACCCAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ATQPGCKGCLCQ*YALHTEQHPEQ Trigger: CTGCTCTGGGTGCTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | CATGCGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTaGCTTTGCCAGTGCTACGCCCTGCACACAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HAHAATQPGCKG*LCQCYALHTEQ Trigger: CTGCTCTGTGTGCAGGGCGTAGCACTGGCAAAGGCAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 72 bp | GCAGGTAAGCGGGATCCTCTTGGTAGGCTGAGATGGTaGGTGCCACGCTGCGTGCAGTGGCCGCATCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGKRDPLGRLRW*VPRCVQWPHPG Trigger: CCCTGGATGCGGCCACTGCACGCAGCGTGGCACTCACCATCTCAGCCTACCAAGAGGATCCCGCTTACCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | ACAGAGCAGCACCCAGAGCAGAGCCCACGGGCGCCCTaGATAGAAGAGCCTCAACACCGTGGCAGCCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: TEQHPEQSPRAP*IEEPQHRGSHE Trigger: TTCGTGGCTGCCACGGTGTTGAGGCTCTTCTATGCAGGGCGCCCGTGGGCTCTGCTCTGGGTGCTGCTCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | GTAGGCACCTTCACCGACAGCGCCCGTAGCCTCCGCTaGTTCCCAGGGCTGATGGTAGTTGCCATCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: VGTFTDSARSLR*FPGLMVVAIPH Trigger: GTGTGGGATGGCAACTACCATCAGCCCTGGGAACCAGCGGAGGCTACGGGCGCTGTCGGTGAAGGTGCCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | CCCACGGGCGCCCTGCATAGAAGAGCCTCAACACCGTaGCAGCCACGAAGAAAGGGAAGAGGCCCGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: PTGALHRRASTP*QPRRKGRGPRP Trigger: TGGTCTCGGGCCTCTTCCCTTTCTTCGTGGCTGCCACGGTGTTGAGGCTCTTCTATGCAGGGCGCCCGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 72 bp | TGTACAGATCCTCAGCGCGGTTGCCGTCCACCACCATaGGCACGCGTAACCTCGTGTGCGGGTACAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTDPQRGCRPPP*ARVTSCAGTAR Trigger: CCTTGCTGTACCCGCACACGAGGTTACGCGTGCTCATGGTGGTGGACGGCAACCGCGCTGAGGATCTGTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 72 bp | GGTAAGCGAAGAGGCTCTGTGCCACTAGGTGTGCGCTaGGGAATGCCCCATAGAGGCCAAAGGCCAGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GKRRGSVPLGVR*GMPHRGQRPGV Trigger: GACTCCTGGCCTTTGGCCTCTATGGGGCATTCCTCAGCGCACACCTAGTGGCACAGAGCCTCTTCGCTTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | ACATGTAGAGTGGTGCATAGAGTGACAGCAGCACCATaGGCACGCAGCCACGCAGCCAGGCTGCAAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TCRVVHRVTAAP*ARSHAARLQRL Trigger: CAGCCTTTGCAGCCTGGCTGCGTGGCTGCGTGCGCATGGTGCTGCTGTCACTCTATGCACCACTCTACATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 90 bp | CATCCAACACTCGCACAAGCTCCAGCAGTGCCATGGGGTCTAGTCTaGTGTCTGAGTCACAGACCTGCACGTAGTCCACGGAGTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HPTLAQAPAVPWGLV*CLSHRPARSPRSRP Trigger: TGGGCGACTCCGTGGACTACGTGCAGGTCTGTGACTCAGACACAAGACTAGACCCCATGGCACTGCTGGAGCTTGTGCGAGTGTTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | CCCAGGGCTGATGGTAGTTGCCATCCCACACATAAGTaGCGGGGTCCTCATCGGCGAAGACTTCTCGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PRADGSCHPTHK*RGPHRRRLLGT Trigger: TGTTCCGAGAAGTCTTCGCCGATGAGGACCCCGCCACTTATGTGTGGGATGGCAACTACCATCAGCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 72 bp | CTCGCACAAGCTCCAGCAGTGCCATGGGGTCTAGTCTaGTGTCTGAGTCACAGACCTGCACGTAGTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: LAQAPAVPWGLV*CLSHRPARSPR Trigger: CCGTGGACTACGTGCAGGTCTGTGACTCAGACACAAGACTAGACCCCATGGCACTGCTGGAGCTTGTGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 72 bp | GTCATCCCCAAATGTGCAGTGGGTGCCCAGGAACTTTaGGTTGTACCAGGCCTCCAAGAACTGCTGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VIPKCAVGAQEL*VVPGLQELLQE Trigger: CTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCACCCACTGCACATTTGGGGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS TCA 72 bp | GCCAGTTTCTTCCGGCCCGAGGTACCCCAACCACTTTaGTTCATGGTAACCAACGCTAGGAATTTGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASFFRPEVPQPL*FMVTNARNLAG Trigger: GCCTGCCAAATTCCTAGCGTTGGTTACCATGAATCAAAGTGGTTGGGGTACCTCGGGCCGGAAGAAACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | CTTCATCCAACACTCGCACAAGCTCCAGCAGTGCCATaGGGTCTAGTCTTGTGTCTGAGTCACAGACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHPTLAQAPAVP*GLVLCLSHRPA Trigger: TGCAGGTCTGTGACTCAGACACAAGACTAGACCCCATGGCACTGCTGGAGCTTGTGCGAGTGTTGGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CCA 72 bp | TCATCCCCAAATGTGCAGTGGGTGCCCAGGAACTTTTaGTTGTACCAGGCCTCCAAGAACTGCTGCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSPNVQWVPRNF*LYQASKNCCRR Trigger: TCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCACCCACTGCACATTTGGGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 72 bp | TCCCCAAATGTGCAGTGGGTGCCCAGGAACTTTTGGTaGTACCAGGCCTCCAAGAACTGCTGCAGGAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: SPNVQWVPRNFW*YQASKNCCRRL Trigger: CAATCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGGCACCCACTGCACATTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS CAA 72 bp | TGGTTGTACCAGGCCTCCAAGAACTGCTGCAGGAGATaGTTTCTGTATAGACCCAGAGGACCACTGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WLYQASKNCCRR*FLYRPRGPLMQ Trigger: CTGCATCAGTGGTCCTCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | CCCAGGAACTTTTGGTTGTACCAGGCCTCCAAGAACTaGTGCAGGAGATTGTTTCTGTATAGACCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PRNFWLYQASKN*CRRLFLYRPRG Trigger: TCCTCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||
| CDS GCA 72 bp | AGGAACTTTTGGTTGTACCAGGCCTCCAAGAACTGCTaGAGGAGATTGTTTCTGTATAGACCCAGAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RNFWLYQASKNC*RRLFLYRPRGP Trigger: TGGTCCTCTGGGTCTATACAGAAACAATCTCCTGCAGCAGTTCTTGGAGGCCTGGTACAACCAAAAGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003762.8 |
||