Pregenerated sensors for HARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019143Ensembl transcript IDs: ENSMUST00000019287.9, ENSMUST00000152954.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATaGCTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: ERIQRYFRSAFAARG*LSGMTAMCVLAEQL Trigger: CAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAGGCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CCA 90 bp | AAGCTACAGTCAGGAACAAAGTACATAGTTAGCTTCTCATTTCAATaGTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: KLQSGTKYIVSFSFQ*CRVLASGDSSRALL Trigger: GAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCACCATTGAAATGAGAAGCTAACTATGTACTTTGTTCCTGACTGTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR GCA 90 bp | GATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTaGAAAGTCCACCAGAACTCGGTCCTAAATGAAAACTTTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: DGSRRHLYNIHAGHC*KVHQNSVLNENFSS Trigger: AGAAGAAAAGTTTTCATTTAGGACCGAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR GCA 90 bp | CTACAGTCAGGAACAAAGTACATAGTTAGCTTCTCATTTCAATGGTaGAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATA | + |
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Preference number: 1 (lower is better) Translates to: LQSGTKYIVSFSFQW*RVLASGDSSRALLI Trigger: TATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCACCATTGAAATGAGAAGCTAACTATGTACTTTGTTCCTGACTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CCA 90 bp | TATGTGTCTGTGCATCAGTATGTGCACATTAAGTGCAGGTGTTTGTaGAAGCCAGAAGAGAGCCTCAGATACCAGTTACTGGAGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: YVSVHQYVHIKCRCL*KPEESLRYQLLELQ Trigger: CTGTAACTCCAGTAACTGGTATCTGAGGCTCTCTTCTGGCTTCCACAAACACCTGCACTTAATGTGCACATACTGATGCACAGACACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR CCA 90 bp | AGATACCAGTTACTGGAGTTACAGGCAGTTGTAATCACCCTGATGTaGTTGCTAGGAAATGAACTCAGGTCCTCTGCAAAAGTAATATGC | + |
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Preference number: 1 (lower is better) Translates to: RYQLLELQAVVITLM*LLGNELRSSAKVIC Trigger: GCATATTACTTTTGCAGAGGACCTGAGTTCATTTCCTAGCAACCACATCAGGGTGATTACAACTGCCTGTAACTCCAGTAACTGGTATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCTGTCTCTACTTCCCTTGTGCTAGGATTAAAGTCCTGTGCCACCTTGCCGGAAGAACCAACAGATaGTCTGCTGGGCCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LACLYFPCARIKVLCHLAGRTNR*SAGPLG Trigger: TCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCC...GGCAAGGTGGCACAGGACTTTAATCCTAGCACAAGGGAAGTAGAGACAGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR CAA 90 bp | CCTGTCTCTACTTCCCTTGTGCTAGGATTAAAGTCCTGTGCCACCTaGCCTGGCACCAAAGCTGACTCTGAACTTCCGATCTTCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PVSTSLVLGLKSCAT*PGTKADSELPIFLL Trigger: AAGCAGGAAGATCGGAAGTTCAGAGTCAGCTTTGGTGCCAGGCAAGGTGGCACAGGACTTTAATCCTAGCACAAGGGAAGTAGAGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATCTTGTACAACATCCATaGTGGCCACTGTTGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: VQSLSLRRLFQSLAHSDHLVQHP*WPLLQS Trigger: ACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAG...ATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CAA 90 bp | CGACTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACATCCCTTaGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: RLFQSLAHSDHPHIP*REFRGTSDLPLQLE Trigger: CTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGGATGTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGCTAGTCGAACTCGGTCCTAAATaGAAACTTTTCTTCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LSGMTAMCVLAEQLLVLVELGPK*KLFFYR Trigger: CCTGTAGAAGAAAAGTTTTCATTTAGGACCGAGTTC...GACTAGCACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGGCATGACAGCCATGTaGGTTCTAGCAGAGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: IPLREFRGTSDLPLQLEDGMTAM*VLAEQL Trigger: CAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCC...ATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CAA 90 bp | ACCTTATGTAGTTCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTaGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCACCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: TLCSSVSRRDGSRRH*YNIHAGHCCKVHQN Trigger: GTTCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGAACTACATAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCACCAAAGCTGACTCTGAACTTCCGATCTTCCTGCTTTCACTTCCCAAGTATGTGCACATTAAGTaGAGGTGTTTGTGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PGTKADSELPIFLLSLPKYVHIK*RCLWKP Trigger: TGGCTTCCACAAACACCTGCACTTAATGTGCACATA...CTTGGGAAGTGAAAGCAGGAAGATCGGAAGTTCAGAGTCAGCTTTGGTGCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCGTACAACATCCATGCTaGCCACTGTTGCAAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PFERIQRYFRSAFAARGCVQHPC*PLLQSP Trigger: TGGACTTTGCAACAGTGGCCAGCATGGATGTTGTAC...GCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCGAACTCGGTCCTAAATaGAAACTTTTCTTCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: MEAEGTCTTSMLATVAKSELGPK*KLFFYR Trigger: CCTGTAGAAGAAAAGTTTTCATTTAGGACCGAGTTC...GGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGATAATTGGCCTGTCTCTACTTCCCTTGTGCTAGGATTAAAGTCCTGTGCCTCTTCTTCTACTACGTaGGCCCCAGGAAAGATTACT | + |
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Preference number: 2 (lower is better) Translates to: TDNWPVSTSLVLGLKSCASSSTT*APGKIT Trigger: AGTAATCTTTCCTGGGGCTCACGTAGTAGAAGAAGA...GGCACAGGACTTTAATCCTAGCACAAGGGAAGTAGAGACAGGCCAATTATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTGCTTTCACTTCCCAAGTGCTAGGCAGACATTCTATCAAGAGAGCCACAGCCACACTTTATGTTaGTGTTTTACTGGGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SSCFHFPSARQTFYQESHSHTLC*CFTGLF Trigger: AAACAACCCAGTAAAACACCAACATAAAGTGTGGCT...GTGGCTCTCTTGATAGAATGTCTGCCTAGCACTTGGGAAGTGAAAGCAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCCAGGAAAGATTACTTGTAACTCACACAGTTCTCCAGTATATATTCAAAGTGGTTGCTAGGAAATaGACTCAGGTCCTCTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: EPQERLLVTHTVLQYIFKVVARK*TQVLCK Trigger: TTTGCAGAGGACCTGAGTTCATTTCCTAGCAACCAC...TTTGAATATATACTGGAGAACTGTGTGAGTTACAAGTAATCTTTCCTGGGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR GCA 72 bp | GCAGCTAGAGGATGCCTCTCAGGCATGACAGCCATGTaGGTTCTAGCAGAGCAGCTGCTAGTGCTAGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: AARGCLSGMTAM*VLAEQLLVLVH Trigger: GTGGACTAGCACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAGGCATCCTCTAGCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATCCATGCTGGCCACTGTaGCAAAGTCCACCAGAACTC | + |
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Preference number: 3 (lower is better) Translates to: VQSLSLRRLFQSLAHSDHPCWPL*QSPPEL Trigger: GAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGG...ATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATCCATGCTGGCCACTGTaGCAAAGTCCACCAGAACTC | + |
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Preference number: 3 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHPCWPL*QSPPEL Trigger: GAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGG...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGCTAGTCGGAAGCAGAAGGCACTaGTACAACATCCATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LSGMTAMCVLAEQLLVLVGSRRH*YNIHAG Trigger: GCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCC...GACTAGCACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR GCA 72 bp | GAGAGATGGAAGCAGAAGGCACTTGTACAACATCCATaGTGGCCACTGTTGCAAAGTCCACCAGAACTCGGT | + |
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Preference number: 3 (lower is better) Translates to: ERWKQKALVQHP*WPLLQSPPELG Trigger: ACCGAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CCA 72 bp | AGATGGAAGCAGAAGGCACTTGTACAACATCCATGCTaGCCACTGTTGCAAAGTCCACCAGAACTCGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: RWKQKALVQHPC*PLLQSPPELGP Trigger: AGGACCGAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCGGAAGCAGAAGGCACTaGTACAACATCCATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PFERIQRYFRSAFAARGCGSRRH*YNIHAG Trigger: GCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCC...GCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR GCA 72 bp | AGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTaGAAAGTCCACCAGAACTCGGTCCTAAATGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: RRHLYNIHAGHC*KVHQNSVLNEN Trigger: GTTTTCATTTAGGACCGAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CCA 72 bp | GTGCATCAGTATGTGCACATTAAGTGCAGGTGTTTGTaGAAGCCAGAAGAGAGCCTCAGATACCAGTTACTG | + |
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Preference number: 3 (lower is better) Translates to: VHQYVHIKCRCL*KPEESLRYQLL Trigger: CAGTAACTGGTATCTGAGGCTCTCTTCTGGCTTCCACAAACACCTGCACTTAATGTGCACATACTGATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR TCA 72 bp | CCACTGTTGCAAAGTCCACCAGAACTCGGTCCTAAATaGAAACTTTTCTTCTACAGGCAGCAGATGGAAATC | + |
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Preference number: 3 (lower is better) Translates to: PLLQSPPELGPK*KLFFYRQQMEI Trigger: GATTTCCATCTGCTGCCTGTAGAAGAAAAGTTTTCATTTAGGACCGAGTTCTGGTGGACTTTGCAACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR TCA 72 bp | GGCAGTTGTAATCACCCTGATGTGGTTGCTAGGAAATaGACTCAGGTCCTCTGCAAAAGTAATATGCACCTT | + |
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Preference number: 3 (lower is better) Translates to: GSCNHPDVVARK*TQVLCKSNMHL Trigger: AAGGTGCATATTACTTTTGCAGAGGACCTGAGTTCATTTCCTAGCAACCACATCAGGGTGATTACAACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR CCA 72 bp | TCAGGAACAAAGTACATAGTTAGCTTCTCATTTCAATaGTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SGTKYIVSFSFQ*CRVLASGDSSR Trigger: TCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCACCATTGAAATGAGAAGCTAACTATGTACTTTGTTCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| 3UTR CCA 72 bp | ATAAGACTACATGTGTGCTTCACAAGTCATGGTAAGTaGGTAGAGGACAGAGGACAAACAAGAAAATCTTTT | + |
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Preference number: 3 (lower is better) Translates to: IRLHVCFTSHGK*VEDRGQTRKSF Trigger: AAAAGATTTTCTTGTTTGTCCTCTGTCCTCTACCCACTTACCATGACTTGTGAAGCACACATGTAGTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| 3UTR TCA 72 bp | TCGGTGAGCCATCTCTCCAGTCCACTAGTACATTTTTaGAATGTAACATATCATATAACCACTTCTAGAACA | + |
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Preference number: 3 (lower is better) Translates to: SVSHLSSPLVHF*NVTYHITTSRT Trigger: TGTTCTAGAAGTGGTTATATGATATGTTACATTTCAAAAATGTACTAGTGGACTGGAGAGATGGCTCACCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGCAGCTGCTAGTGCTAGTCCACGAGTCCTCAGGACCTTATGTAGTTCTGGGAGGTCGCAGGAGCTaGCCGAGCAGCGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AEQLLVLVHESSGPYVVLGGRRS*PSSAAQ Trigger: CTGGGCTGCGCTGCTCGGCCAGCTCCTGCGACCTCC...CAGAACTACATAAGGTCCTGAGGACTCGTGGACTAGCACTAGCAGCTGCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CCA 90 bp | CTCATTTCAATGGTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTGGAGGTCGCAGGAGCTaGCCGAGCAGCGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LISMVQSLSLRRLFQSLAGGRRS*PSSAAQ Trigger: CTGGGCTGCGCTGCTCGGCCAGCTCCTGCGACCTCC...AGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCACCATTGAAATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CCA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATGGGTGCACACAGTGCTaGGAGGTCGCAGGAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHGCTQC*EVAGAG Trigger: GCCAGCTCCTGCGACCTCCCAGCACTGTGTGCACCC...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATAGGTCCCCTAGGCCCTaGAAGGCCAGCTGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VQSLSLRRLFQSLAHSDHRSPRP*KASWLW Trigger: CCAAAGCCAGCTGGCCTTGCAGGGCCTAGGGGACCT...ATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACTATGACAGCCGCGGGTaGACACAGTGCTGGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLSLRRLFQSLAHSDHPHYDSRG*TQCWEV Trigger: GACCTCCCAGCACTGTGTGCACCCGCGGCTGTCATA...GTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCACGGGTGCACACAGTGCTaGGAGGTCGCAGGAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GSRRHLYNIHAGHCCKVHGCTQC*EVAGAG Trigger: GCCAGCTCCTGCGACCTCCCAGCACTGTGTGCACCC...GTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR TCA 90 bp | GGATGCCTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGGTTTCCTTTCCAGCCTaGGCTGGAGACTCTAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GCLSGMTAMCVLAEQLLVVSFPA*AGDSSS Trigger: ACTGCTAGAGTCTCCAGCTCAGGCTGGAAAGGAAAC...CACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAGGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS-3UTR GCA 90 bp | AGGAGAGATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCTATGACAGCCGCGGGTaGACACAGTGCTGGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RRDGSRRHLYNIHAGHCCYDSRG*TQCWEV Trigger: GACCTCCCAGCACTGTGTGCACCCGCGGCTGTCATA...GCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR GCA 90 bp | AGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCCTCTCAGGCAGGTCCCCTAGGCCCTaGAAGGCCAGCTGGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RIQRYFRSAFAARGCLSGRSPRP*KASWLW Trigger: CCAAAGCCAGCTGGCCTTGCAGGGCCTAGGGGACCT...GCCTGAGAGGCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CCA 90 bp | AGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACAAGGCCAGCTGGCTTTaGGATAGTCTGGGATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLSLRRLFQSLAHSDHPHKASWL*DSLGSL Trigger: CAAGGATCCCAGACTATCCCAAAGCCAGCTGGCCTT...GTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR TCA 90 bp | TCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCCCACACAAGGCACGTaGTGGCCCTTGGGATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SVSRRDGSRRHLYNIHAGPTQGT*WPLGSN Trigger: GTTTGATCCCAAGGGCCATCACGTGCCTTGTGTGGG...GCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS-3UTR GCA 90 bp | CCTTATGTAGTTCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTTGTACAACACGCGGGTGCACACAGTaGTGGGAGGTCGCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PYVVLYPGEMEAEGTCTTRGCTQ*WEVAGA Trigger: AGCTCCTGCGACCTCCCAGCACTGTGTGCACCCGCG...TGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGAACTACATAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR GCA 90 bp | ATCCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATCGCGGGTGCACACAGTaGTGGGAGGTCGCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLREFRGTSDLPLQLEDRGCTQ*WEVAGA Trigger: AGCTCCTGCGACCTCCCAGCACTGTGTGCACCCGCG...ATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCAGCTGCTAGTGCTAGTCCACGAGTCCTCAGGACCTTATGTAGTTCTGAAGGCCAGCTGGCTTTaGGATAGTCTGGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEQLLVLVHESSGPYVVLKASWL*DSLGSL Trigger: CAAGGATCCCAGACTATCCCAAAGCCAGCTGGCCTT...CAGAACTACATAAGGTCCTGAGGACTCGTGGACTAGCACTAGCAGCTGCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATAGTTCTTCTGGGGTGTaGCCACAAACACTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQSLSLRRLFQSLAHSDHSSSGV*PQTLGS Trigger: AGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACT...ATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACAGTTCTTCTGGGGTGTaGCCACAAACACTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLRRLFQSLAHSDHPHSSSGV*PQTLGS Trigger: AGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACT...GTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GGATGCCTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGTGGAGAAAGTTCTTCTaGGGTGTGGCCACAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: GCLSGMTAMCVLAEQLLVWRKFF*GVATNT Trigger: AGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCA...CACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAGGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGCTAGTCTCACAACCATCTGTTaGGGACTTAAATCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRHDSHVRSSRAAASASLTTIC*GLKSLV Trigger: CACCAGGGATTTAAGTCCTCAACAGATGGTTGTGAG...ACTAGCACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGCTAGTCTCAGACAGTCGCTTCTaGATTTCAGCCACGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGMTAMCVLAEQLLVLVSDSRF*ISATRL Trigger: AAGTCTCGTGGCTGAAATTCAGAAGCGACTGTCTGA...GACTAGCACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATAGAAAGTCCCCCAGCTaGAGTCCACTTAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHRKSPS*SPLRIS Trigger: TGAAATCCTAAGTGGACTGCAGCTGGGGGACTTTCT...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCACACACTTGGGTCTCTGTaGTGCGAACCTTCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRHLYNIHAGHCCKVHTLGSL*CEPSHQ Trigger: CTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGT...GTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTAGTGCTAGTCCACGAGTCCTCAGGACCTTATGTAGTTCTGTATCCAGGAGTGGCCACAAACACTTaGGTCTCTGTGGTGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLVHESSGPYVVLYPGVATNT*VSVVRT Trigger: GGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCAC...TCCTGGATACAGAACTACATAAGGTCCTGAGGACTCGTGGACTAGCACTAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | AGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCCTCTCAGGCGTGGCCACAAACACTTaGGTCTCTGTGGTGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RIQRYFRSAFAARGCLSGVATNT*VSVVRT Trigger: GGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCAC...GCCTGAGAGGCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATTTTATAAAGCATCTCTaGCTTGATCCCGGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHFIKHL*LDPGIP Trigger: TGGGATGCCGGGATCAAGGCAGAGATGCTTTATAAA...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACATGCATCAGGGATCATTaGGTCAAACTCACCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLASGDSSRALLIATILTCIRDH*VKLTSN Trigger: ATTGCTGGTGAGTTTGACCCAATGATCCCTGATGCA...TGTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATGGCATCCCAAAGCTCTaGAATTATCTTCAAACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHGIPKL*NYLQTF Trigger: GAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCC...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATCATCAGAGGAATGTCTaGTTTCTCACAATAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHHQRNV*FLTIVQ Trigger: CTGCACTATTGTGAGAAAGCAGACATTCCTCTGATG...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GGATGCCTCTCAGGCATGACAGCCATGTGCGTTCTAGCAGAGCAGCTGCTAGTGATCTTCAAACGTTCTTaGAGAAAGTTCTTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCLSGMTAMCVLAEQLLVIFKRS*RKFFWG Trigger: ACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGAT...CACTAGCAGCTGCTCTGCTAGAACGCACATGGCTGTCATGCCTGAGAGGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATTTAGGATTTCACACATaGTCCTCAAACACTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHLGFHT*SSNTLH Trigger: ATGCAGAGTGTTTGAGGATCATGTGTGAAATCCTAA...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | AGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCCTCTCAGGCGATCCTCAAACACTCTaGATCAGGGATCATTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RIQRYFRSAFAARGCLSGDPQTL*IRDHWV Trigger: GACCCAATGATCCCTGATGCAGAGTGTTTGAGGATC...GCCTGAGAGGCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCACCAAAGCTGACTCTGAACTTCCGATCTTCCTGCTTTCACTTCCCAAGTTTATAAAGCATCTCTaGCTTGATCCCGGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGTKADSELPIFLLSLPKFIKHL*LDPGIP Trigger: TGGGATGCCGGGATCAAGGCAGAGATGCTTTATAAA...CTTGGGAAGTGAAAGCAGGAAGATCGGAAGTTCAGAGTCAGCTTTGGTGCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCTTCTCTCTACTCCAATaGTCAACCCCACACAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRRDGSRRHLYNIHAGFSLLQ*STPHKA Trigger: TGCCTTGTGTGGGGTTGAGCATTGGAGTAGAGAGAA...GCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
||
| 3UTR CAA 72 bp | AGTTCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTaGTACAACATCCATGCTGGCCACTGTTGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVSRRDGSRRH*YNIHAGHCCKV Trigger: GACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCCTCACAACCATCTGTTaGGGACTTAAATCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFERIQRYFRSAFAARGCLTTIC*GLKSLV Trigger: CACCAGGGATTTAAGTCCTCAACAGATGGTTGTGAG...GCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCAGCTGCTAGTGCTAGTCCACGAGTCCTCAGGACCTTATGTAGTTCTGTTAGGATTTCACACATaGTCCTCAAACACTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEQLLVLVHESSGPYVVLLGFHT*SSNTLH Trigger: ATGCAGAGTGTTTGAGGATCATGTGTGAAATCCTAA...CAGAACTACATAAGGTCCTGAGGACTCGTGGACTAGCACTAGCAGCTGCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGCTCAGACAGTCGCTTCTaGATTTCAGCCACGAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PFERIQRYFRSAFAARGCSDSRF*ISATRL Trigger: AAGTCTCGTGGCTGAAATTCAGAAGCGACTGTCTGA...GCATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTGCTTTCACTTCCCAAGTGCTAGGCAGACATTCTATCAAGAGAGCCACAGAAAGTCCCCCAGCTaGAGTCCACTTAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCFHFPSARQTFYQESHRKSPS*SPLRIS Trigger: TGAAATCCTAAGTGGACTGCAGCTGGGGGACTTTCT...GTGGCTCTCTTGATAGAATGTCTGCCTAGCACTTGGGAAGTGAAAGCAGGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCACAAATTCGGCTTCTCTTaGTGGGATTTCAGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRRHLYNIHAGHCCKVHKFGFS*WDFSCS Trigger: TGAACAACTGAAATCCCATCAAGAGAAGCCGAATTT...GTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCACCAGAAAATTCGGCTTCTCTTaGTGGGATTTCAGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGTCTTSMLATVAKSTRKFGFS*WDFSCS Trigger: TGAACAACTGAAATCCCATCAAGAGAAGCCGAATTT...TCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACATCCCTTTGAGAGAATTCCATCAGAGGAATGTCTaGTTTCTCACAATAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLAHSDHPHIPLREFHQRNV*FLTIVQ Trigger: CTGCACTATTGTGAGAAAGCAGACATTCCTCTGATG...GAATTCTCTCAAAGGGATGTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCAACAACTCTCCACCTTaGTCCTTCAAATCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: MEAEGTCTTSMLATVAKSNNSPP*SFKSYM Trigger: CATGTATGATTTGAAGGATCAAGGTGGAGAGTTGTT...GGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAGGACAGAGGACAAACAAGAAAATCTTTTCTCTTCTTCTACTACGTGAGCACACTTGGGTCTCTGTaGTGCGAACCTTCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEDRGQTRKSFLFFYYVSTLGSL*CEPSHQ Trigger: CTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGT...GCTCACGTAGTAGAAGAAGAGAAAAGATTTTCTTGTTTGTCCTCTGTCCTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATTGGAGAAAGTTCTTCTaGGGTGTGGCCACAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: IPLREFRGTSDLPLQLEDWRKFF*GVATNT Trigger: AGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCA...ATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCAGAGCCTTGCTCATAGCGACCATCCTCACATCCCTTTGAGAGAATTCATCTTCAAACGTTCTTaGAGAAAGTTCTTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLAHSDHPHIPLREFIFKRS*RKFFWG Trigger: ACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGAT...GAATTCTCTCAAAGGGATGTGAGGATGGTCGCTATGAGCAAGGCTCTGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| 3UTR CAA 72 bp | CTGGAGTTACAGGCAGTTGTAATCACCCTGATGTGGTaGCTAGGAAATGAACTCAGGTCCTCTGCAAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVITLMW*LGNELRSSAKV Trigger: TACTTTTGCAGAGGACCTGAGTTCATTTCCTAGCAACCACATCAGGGTGATTACAACTGCCTGTAACTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
||
| CDS-3UTR GCA 90 bp | ATCCCTTTGAGAGAATTCAGAGGTACTTCAGATCTGCCTTTGCAGCTAGAGGATGGCATCCCAAAGCTCTaGAATTATCTTCAAACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPLREFRGTSDLPLQLEDGIPKL*NYLQTF Trigger: GAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCC...ATCCTCTAGCTGCAAAGGCAGATCTGAAGTACCTCTGAATTCTCTCAAAGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS CCA 90 bp | CTGCCTTTGCAACCTGGCTATGACAGCCGCGGGTGCACACAGTGCTaGGAGGTCGCAGGAGCTGGCCGAGCAGCGCAGCCCAGGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPLQPGYDSRGCTQC*EVAGAGRAAQPRPC Trigger: GCAGGGCCTGGGCTGCGCTGCTCGGCCAGCTCCTGCGACCTCCCAGCACTGTGTGCACCCGCGGCTGTCATAGCCAGGTTGCAAAGGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS CCA 90 bp | AAGAGCAGCTTCAGGTCCCCTAGGCCCTGCAAGGCCAGCTGGCTTTaGGATAGTCTGGGATCCTTGAACAAGTCCTCAACCAGGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: KSSFRSPRPCKASWL*DSLGSLNKSSTRDI Trigger: GATATCCCTGGTTGAGGACTTGTTCAAGGATCCCAGACTATCCCAAAGCCAGCTGGCCTTGCAGGGCCTAGGGGACCTGAAGCTGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS CCA 90 bp | TCTCTACTCCAATGCTCAACCCCACACAAGGCACGTGATGGCCCTTaGGATCAAACTGGGCTACCAGATTGTCATAGCGCCCACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQCSTPHKARDGP*DQTGLPDCHSAHQQ Trigger: CTGCTGGTGGGCGCTATGACAATCTGGTAGCCCAGTTTGATCCCAAGGGCCATCACGTGCCTTGTGTGGGGTTGAGCATTGGAGTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
||
| CDS CCA 90 bp | AAAATCACACTGGCAGAACTCCCGGTAGCGGCCCTGGGCTATAGCTaGGCTCTCTCGCCTCCAGACCTTTCCAACTTGGTATCGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KITLAELPVAALGYS*ALSPPDLSNLVSFH Trigger: ATGAAACGATACCAAGTTGGAAAGGTCTGGAGGCGAGAGAGCCCAGCTATAGCCCAGGGCCGCTACCGGGAGTTCTGCCAGTGTGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CAA 90 bp | AGATCTGCCTTTGCAGCTAGAGGATGCCTCTCAGGCATGACAGCCATGTGCGTTCAGATGGTTCGGAGCTaGCTCTCAGGAACACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RSAFAARGCLSGMTAMCVQMVRS*LSGTPQ Trigger: CTGTGGTGTTCCTGAGAGCAAGCTCCGAACCATCTG...AACGCACATGGCTGTCATGCCTGAGAGGCATCCTCTAGCTGCAAAGGCAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGTTAACTGGAAGAACCAACAGATGCTCTGCTGGGCCCCTGGGACACCATGAGCTAGACCTTTCTTaGCCACCATCTCATGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLTGRTNRCSAGPLGHHELDLS*PPSHAS Trigger: TGAGGCATGAGATGGTGGCAAAGAAAGGTCTAGCTC...ATGGTGTCCCAGGGGCCCAGCAGAGCATCTGTTGGTTCTTCCAGTTAACAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CAA 90 bp | CTCATTTCAATGGTGCAGAGTCTTAGCCTCAGGCGACTCTTCCAGAGCCTTGCTTGTGGCCACAAACACTaGGGTCTCTGTGGTGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LISMVQSLSLRRLFQSLACGHKH*GLCGAN Trigger: GTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACA...AGCAAGGCTCTGGAAGAGTCGCCTGAGGCTAAGACTCTGCACCATTGAAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCAGATGGTTCGGAGCTaGCTCTCAGGAACACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRRDGSRRHLYNIHAGQMVRS*LSGTPQ Trigger: CTGTGGTGTTCCTGAGAGCAAGCTCCGAACCATCTG...GCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCACCAGAACTCGGGAGCTAGACCTTTCTTaGCCACCATCTCATGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTCTTSMLATVAKSTRTRELDLS*PPSHAS Trigger: TGAGGCATGAGATGGTGGCAAAGAAAGGTCTAGCTC...CCGAGTTCTGGTGGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCCACTGTTGCAAAGTCCTGTGGCCACAAACACTaGGGTCTCTGTGGTGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MEAEGTCTTSMLATVAKSCGHKH*GLCGAN Trigger: GTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACA...GGACTTTGCAACAGTGGCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 90 bp | CTGCTGGCCACGGAACGGAGCTTGATGACACCTTCATTCCGCTCTTaGTCACCAATAATGACCATCAGAGGAATGTCTGCTTTCTCACAA | + |
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Preference number: 5 (lower is better) Translates to: LLATERSLMTPSFRS*SPIMTIRGMSAFSQ Trigger: TTGTGAGAAAGCAGACATTCCTCTGATGGTCATTATTGGTGAGCAAGAGCGGAATGAAGGTGTCATCAAGCTCCGTTCCGTGGCCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CCA 90 bp | CTGCAATTATCTTCAAACGTTCTTGGAGAAAGTTCTTCTGGGGTGTaGCCACAAACACTTGGGTCTCTGTGGTGCGAACCTTCTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: LQLSSNVLGESSSGV*PQTLGSLWCEPSHQ Trigger: CTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 90 bp | GAAAGTTCTTCTGGGGTGTGGCCACAAACACTTGGGTCTCTGTGGTaGGAACCTTCTCACCAGACATCTTATCAGCAATTCCAAATAACC | + |
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Preference number: 5 (lower is better) Translates to: ESSSGVWPQTLGSLW*EPSHQTSYQQFQIT Trigger: GGTTATTTGGAATTGCTGATAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019287.9 |
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| CDS GCA 90 bp | TCTTCATCTTCTGTTCCACAAGGTAGAAGATTCTCTCTACTCCAATaGTCAACCCCACACAAGGCACGTGATGGCCCTTGGGATCAAACT | + |
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Preference number: 5 (lower is better) Translates to: SSSSVPQGRRFSLLQ*STPHKARDGPWDQT Trigger: AGTTTGATCCCAAGGGCCATCACGTGCCTTGTGTGGGGTTGAGCATTGGAGTAGAGAGAATCTTCTACCTTGTGGAACAGAAGATGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS CCA 90 bp | GGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACTTGGGTCTCTGTaGTGCGAACCTTCTCACCAGACATCTTATCAGCAATTCCAAATA | + |
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Preference number: 5 (lower is better) Translates to: GESSSGVWPQTLGSL*CEPSHQTSYQQFQI Trigger: TATTTGGAATTGCTGATAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019287.9 |
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| CDS CCA 90 bp | CAAAGCTCTGCAATTATCTTCAAACGTTCTTGGAGAAAGTTCTTCTaGGGTGTGGCCACAAACACTTGGGTCTCTGTGGTGCGAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: QSSAIIFKRSWRKFF*GVATNTWVSVVRTF Trigger: GAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CCA 90 bp | TTGATCCCGGCATCCCAAAGCTCTGCAATTATCTTCAAACGTTCTTaGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACTTGGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LIPASQSSAIIFKRS*RKFFWGVATNTWVS Trigger: AGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCCGGGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CAA 90 bp | GTCCACCAGAACTCGGTCCTAAATGAAAACTTTTCTTCTACAGGCAGCAGATGGACGTTAACACTGCCTTaGCAACCTGGCTATGACAGC | + |
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Preference number: 5 (lower is better) Translates to: VHQNSVLNENFSSTGSRWTLTLP*QPGYDS Trigger: GCTGTCATAGCCAGGTTGCAAAGGCAGTGTTAACGT...CCATCTGCTGCCTGTAGAAGAAAAGTTTTCATTTAGGACCGAGTTCTGGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 90 bp | TCCCTGGTGCCCTTTGGAACCTTGATGACAAAATTCGGCTTCTCTTaGTGGGATTTCAGTTGTTCAGACGTTAACACTGCCTTTGCAACC | + |
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Preference number: 5 (lower is better) Translates to: SLVPFGTLMTKFGFS*WDFSCSDVNTAFAT Trigger: GGTTGCAAAGGCAGTGTTAACGTCTGAACAACTGAAATCCCATCAAGAGAAGCCGAATTTTGTCATCAAGGTTCCAAAGGGCACCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 90 bp | TCTACAACCCGACGGTCATTTACCTTAATGAGAAAGTCCCCCAGCTaGAGTCCACTTAGGATTTCACACATGATCCTCAAACACTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: STTRRSFTLMRKSPS*SPLRISHMILKHSA Trigger: TGCAGAGTGTTTGAGGATCATGTGTGAAATCCTAAGTGGACTGCAGCTGGGGGACTTTCTCATTAAGGTAAATGACCGTCGGGTTGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CAA 90 bp | TCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTTGTACAACATCCATGCTGGCTATCTTCAAACGTTCTaGGAGAAAGTTCTTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SVSRRDGSRRHLYNIHAGYLQTF*EKVLLG Trigger: CCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATA...GCCAGCATGGATGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CAA 90 bp | CTGCTAGTGCTAGTCCACGAGTCCTCAGGACCTTATGTAGTTCTGTATCCAGGACCAGACCTTTCCAACTaGGTATCGTTTCATTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLVLVHESSGPYVVLYPGPDLSN*VSFHFL Trigger: AAGAAAATGAAACGATACCAAGTTGGAAAGGTCTGG...TCCTGGATACAGAACTACATAAGGTCCTGAGGACTCGTGGACTAGCACTAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 90 bp | CAGCTGATAATCTTATCGAGGATTTTCTCCCTCACAACCATCTGTTaGGGACTTAAATCCCTGGTGCCCTTTGGAACCTTGATGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLIILSRIFSLTTIC*GLKSLVPFGTLMTK Trigger: TTTTGTCATCAAGGTTCCAAAGGGCACCAGGGATTTAAGTCCTCAACAGATGGTTGTGAGGGAGAAAATCCTCGATAAGATTATCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 90 bp | GTTTTTATAAAGCATCTCTGCCTTGATCCCGGCATCCCAAAGCTCTaGAATTATCTTCAAACGTTCTTGGAGAAAGTTCTTCTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFIKHLCLDPGIPKL*NYLQTFLEKVLLGC Trigger: ACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCCGGGATCAAGGCAGAGATGCTTTATAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CAA 90 bp | CCTTATGTAGTTCTGTATCCAGGAGAGATGGAAGCAGAAGGCACTTGTACAACACCAGACCTTTCCAACTaGGTATCGTTTCATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PYVVLYPGEMEAEGTCTTPDLSN*VSFHFL Trigger: AAGAAAATGAAACGATACCAAGTTGGAAAGGTCTGG...TGTTGTACAAGTGCCTTCTGCTTCCATCTCTCCTGGATACAGAACTACATAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS-3UTR CAA 90 bp | GTAGAGGACAGAGGACAAACAAGAAAATCTTTTCTCTTCTTCTACTACGTGAGCTATCTTCAAACGTTCTaGGAGAAAGTTCTTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VEDRGQTRKSFLFFYYVSYLQTF*EKVLLG Trigger: CCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATA...GCTCACGTAGTAGAAGAAGAGAAAAGATTTTCTTGTTTGTCCTCTGTCCTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS CCA 72 bp | CAACCTGGCTATGACAGCCGCGGGTGCACACAGTGCTaGGAGGTCGCAGGAGCTGGCCGAGCAGCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QPGYDSRGCTQC*EVAGAGRAAQP Trigger: GGGCTGCGCTGCTCGGCCAGCTCCTGCGACCTCCCAGCACTGTGTGCACCCGCGGCTGTCATAGCCAGGTTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 72 bp | ACACTGCCTTTGCAACCTGGCTATGACAGCCGCGGGTaGACACAGTGCTGGGAGGTCGCAGGAGCTGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TLPLQPGYDSRG*TQCWEVAGAGR Trigger: TCGGCCAGCTCCTGCGACCTCCCAGCACTGTGTGCACCCGCGGCTGTCATAGCCAGGTTGCAAAGGCAGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 72 bp | TGTTCAGACGTTAACACTGCCTTTGCAACCTGGCTATaGCAGCCGCGGGTGCACACAGTGCTGGGAGGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSDVNTAFATWL*QPRVHTVLGGR Trigger: GCGACCTCCCAGCACTGTGTGCACCCGCGGCTGTCATAGCCAGGTTGCAAAGGCAGTGTTAACGTCTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 72 bp | CTCTCTACTCCAATGCTCAACCCCACACAAGGCACGTaGTGGCCCTTGGGATCAAACTGGGCTACCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: LSTPMLNPTQGT*WPLGSNWATRL Trigger: CAATCTGGTAGCCCAGTTTGATCCCAAGGGCCATCACGTGCCTTGTGTGGGGTTGAGCATTGGAGTAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS CAA 90 bp | GCTTCTCTTGATGGGATTTCAGTTGTTCAGACGTTAACACTGCCTTaGCAACCTGGCTATGACAGCCGCGGGTGCACACAGTGCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ASLDGISVVQTLTLP*QPGYDSRGCTQCWE Trigger: CTCCCAGCACTGTGTGCACCCGCGGCTGTCATAGCCAGGTTGCAAAGGCAGTGTTAACGTCTGAACAACTGAAATCCCATCAAGAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CAA 72 bp | GATGGGATTTCAGTTGTTCAGACGTTAACACTGCCTTaGCAACCTGGCTATGACAGCCGCGGGTGCACACAG | + |
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Preference number: 6 (lower is better) Translates to: DGISVVQTLTLP*QPGYDSRGCTQ Trigger: CTGTGTGCACCCGCGGCTGTCATAGCCAGGTTGCAAAGGCAGTGTTAACGTCTGAACAACTGAAATCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 72 bp | TCTGGGGTGTGGCCACAAACACTTGGGTCTCTGTGGTaGGAACCTTCTCACCAGACATCTTATCAGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: SGVWPQTLGSLW*EPSHQTSYQQF Trigger: GAATTGCTGATAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019287.9 |
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| CDS GCA 72 bp | TCTGTTCCACAAGGTAGAAGATTCTCTCTACTCCAATaGTCAACCCCACACAAGGCACGTGATGGCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SVPQGRRFSLLQ*STPHKARDGPW Trigger: CCAAGGGCCATCACGTGCCTTGTGTGGGGTTGAGCATTGGAGTAGAGAGAATCTTCTACCTTGTGGAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS CCA 72 bp | TCTTCTGGGGTGTGGCCACAAACACTTGGGTCTCTGTaGTGCGAACCTTCTCACCAGACATCTTATCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSGVWPQTLGSL*CEPSHQTSYQQ Trigger: TTGCTGATAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019287.9 |
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| CDS CCA 72 bp | TCTTCTGGGGTGTGGCCACAAACACTTGGGTCTCTGTaGTGCGAACCTTCTCACCAGACATCTTCATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSGVWPQTLGSL*CEPSHQTSSSS Trigger: AGAAGATGAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS CAA 72 bp | TTGGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACTaGGGTCTCTGTGGTGCGAACCTTCTCACCAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: LEKVLLGCGHKH*GLCGANLLTRH Trigger: ATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CAA 90 bp | CAAACGTTCTTGGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACTaGGGTCTCTGTGGTGCGAACCTTCTCACCAGACATCTTATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QTFLEKVLLGCGHKH*GLCGANLLTRHLIS Trigger: GCTGATAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019287.9 |
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| CDS CAA 90 bp | TCTGCTGGCCACGGAACGGAGCTTGATGACACCTTCATTCCGCTCTaGCTCACCAATAATGACCATCAGAGGAATGTCTGCTTTCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SAGHGTELDDTFIPL*LTNNDHQRNVCFLT Trigger: TGTGAGAAAGCAGACATTCCTCTGATGGTCATTATTGGTGAGCAAGAGCGGAATGAAGGTGTCATCAAGCTCCGTTCCGTGGCCAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CCA 72 bp | TCTTCAAACGTTCTTGGAGAAAGTTCTTCTGGGGTGTaGCCACAAACACTTGGGTCTCTGTGGTGCGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSNVLGESSSGV*PQTLGSLWCEP Trigger: AGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CAA 72 bp | CACGGAACGGAGCTTGATGACACCTTCATTCCGCTCTaGCTCACCAATAATGACCATCAGAGGAATGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HGTELDDTFIPL*LTNNDHQRNVC Trigger: GCAGACATTCCTCTGATGGTCATTATTGGTGAGCAAGAGCGGAATGAAGGTGTCATCAAGCTCCGTTCCGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CAA 90 bp | CTTGATCCCGGCATCCCAAAGCTCTGCAATTATCTTCAAACGTTCTaGGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACTTGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDPGIPKLCNYLQTF*EKVLLGCGHKHLGL Trigger: GAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCCGGGATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CAA 90 bp | CAAACGTTCTTGGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACTaGGGTCTCTGTGGTGCGAACCTTCTCACCAGACATCTTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QTFLEKVLLGCGHKH*GLCGANLLTRHLHL Trigger: AAGATGAAGATGTCTGGTGAGAAGGTTCGCACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152954.8 |
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| CDS GCA 72 bp | ACGGAACGGAGCTTGATGACACCTTCATTCCGCTCTTaGTCACCAATAATGACCATCAGAGGAATGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TERSLMTPSFRS*SPIMTIRGMSA Trigger: AGCAGACATTCCTCTGATGGTCATTATTGGTGAGCAAGAGCGGAATGAAGGTGTCATCAAGCTCCGTTCCGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 72 bp | AGCTCAAACGCTGGTGTATCCAACCCCTTCGCCCCATaGCGTTTGAAACAGCTGATAATCTTATCGAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SSNAGVSNPFAP*RLKQLIILSRI Trigger: AATCCTCGATAAGATTATCAGCTGTTTCAAACGTCATGGGGCGAAGGGGTTGGATACACCAGCGTTTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CCA 72 bp | GCAATTATCTTCAAACGTTCTTGGAGAAAGTTCTTCTaGGGTGTGGCCACAAACACTTGGGTCTCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AIIFKRSWRKFF*GVATNTWVSVV Trigger: CACCACAGAGACCCAAGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CAA 72 bp | GGCATCCCAAAGCTCTGCAATTATCTTCAAACGTTCTaGGAGAAAGTTCTTCTGGGGTGTGGCCACAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: GIPKLCNYLQTF*EKVLLGCGHKH Trigger: GTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 72 bp | ATCTTATCGAGGATTTTCTCCCTCACAACCATCTGTTaGGGACTTAAATCCCTGGTGCCCTTTGGAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILSRIFSLTTIC*GLKSLVPFGTL Trigger: CAAGGTTCCAAAGGGCACCAGGGATTTAAGTCCTCAACAGATGGTTGTGAGGGAGAAAATCCTCGATAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 72 bp | CGACGGTCATTTACCTTAATGAGAAAGTCCCCCAGCTaGAGTCCACTTAGGATTTCACACATGATCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RRSFTLMRKSPS*SPLRISHMILK Trigger: TTTGAGGATCATGTGTGAAATCCTAAGTGGACTGCAGCTGGGGGACTTTCTCATTAAGGTAAATGACCGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS CCA 72 bp | GCATCCCAAAGCTCTGCAATTATCTTCAAACGTTCTTaGAGAAAGTTCTTCTGGGGTGTGGCCACAAACACT | + |
|
Preference number: 6 (lower is better) Translates to: ASQSSAIIFKRS*RKFFWGVATNT Trigger: AGTGTTTGTGGCCACACCCCAGAAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTGGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS TCA 72 bp | CCCTTTGGAACCTTGATGACAAAATTCGGCTTCTCTTaGTGGGATTTCAGTTGTTCAGACGTTAACACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PFGTLMTKFGFS*WDFSCSDVNTA Trigger: GGCAGTGTTAACGTCTGAACAACTGAAATCCCATCAAGAGAAGCCGAATTTTGTCATCAAGGTTCCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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| CDS GCA 72 bp | AAGCATCTCTGCCTTGATCCCGGCATCCCAAAGCTCTaGAATTATCTTCAAACGTTCTTGGAGAAAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KHLCLDPGIPKL*NYLQTFLEKVL Trigger: AAGAACTTTCTCCAAGAACGTTTGAAGATAATTGCAGAGCTTTGGGATGCCGGGATCAAGGCAGAGATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019287.9 ENSMUST00000152954.8 |
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