Pregenerated sensors for HARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001380Ensembl transcript IDs: ENSMUST00000001416.8, ENSMUST00000235494.2, ENSMUST00000235863.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATaGAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGTTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: ASVLTTLQSSAGWQI*RLFKYICSFVFVQL Trigger: TAACTGAACGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR CCA 90 bp | AGACATTTATTGGACGTTTTGGCCATAGGTTGTTCATCTGCCGTGTaGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: RHLLDVLAIGCSSAV*FFNEAISSPYRNLG Trigger: TCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGCCAAAACGTCCAATAAATGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR TCA 90 bp | TTTGAGTCTTCTCCGTACTTTCCAGTCAGTGTTTCTACTCCAACGTaGCTAATTTCAACTTGTCTCTATTTCTGTAGTCCCTCTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: FESSPYFPVSVSTPT*LISTCLYFCSPSAF Trigger: AAAAGCAGAGGGACTACAGAAATAGAGACAAGTTGAAATTAGTCACGTTGGAGTAGAAACACTGACTGGAAAGTACGGAGAAGACTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
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| 3UTR-3UTR TCA 90 bp | AATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCAGAGACGTGGTTAGTAAAAAGCCTCTGTTCTaGCCACCCTTCAGTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NEAISSPYRNLGGRDVVSKKPLF*PPFSLL Trigger: CAGAAGACTGAAGGGTGGTCAGAACAGAGGCTTTTT...ACTAACCACGTCTCTGCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGCGGTAGAGACATTTATTGGACGTTTTGGCCATAGGTTGTTCATCTGCCGTCACCCTTCAGTCTTCTaGTGGATGGCAAATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: LAVETFIGRFGHRLFICRHPSVF*WMANMQ Trigger: CTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTG...ACGGCAGATGAACAACCTATGGCCAAAACGTCCAATAAATGTCTCTACCGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR TCA 72 bp | GGCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATaGAGCCATCTCAAGTCCATACAGGAATTTAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GHRLFICRVVFQ*SHLKSIQEFRR Trigger: CCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR CCA 72 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATaGCAAATATGCAGACTGTTTAAGTACATATGCAGT | + |
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Preference number: 3 (lower is better) Translates to: ASVLTTLQSSAG*QICRLFKYICS Trigger: ACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR CCA 72 bp | TTGGACGTTTTGGCCATAGGTTGTTCATCTGCCGTGTaGTTTTTCAATGAAGCCATCTCAAGTCCATACAGG | + |
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Preference number: 3 (lower is better) Translates to: LDVLAIGCSSAV*FFNEAISSPYR Trigger: CCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGCCAAAACGTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| 3UTR GCA 72 bp | CTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATaGAGACTGTTTAAGTACATATGCAGTTTTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: LTTLQSSAGWQI*RLFKYICSFVF Trigger: GAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCCCTCCAGCAGCTATaGTGCCCACACCCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTALQQL*CPHPGA Trigger: AGCCCCTGGGTGTGGGCAGCATAGCTGCTGGAGGGC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGACTGAGCCCAACGCATaGCACCTTGCGCCCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLTEPNA*HLAPLG Trigger: CCCAAGGGGCGCAAGGTGCCATGCGTTGGGCTCAGT...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGTGGCCACCAGTGGGATaGCACAAGCACCTGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLWPPVG*HKHLRL Trigger: GAGACGCAGGTGCTTGTGGCATCCCACTGGTGGCCA...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS-3UTR TCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGTTCCTGCTCACCAATaGTGGCCACCAGTGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTVPAHQ*WPPVGC Trigger: GCATCCCACTGGTGGCCATCATTGGTGAGCAGGAAC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGTCAGCGGACGCTTTCTaGTCCTTAAGGCCCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLSADAF*SLRPLT Trigger: TGTGAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGA...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | TTAGCGGTAGAGACATTTATTGGACGTTTTGGCCATAGGTTGTTCATCTGCCGTGCCCTCCAGCAGCTATaGTGCCCACACCCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LAVETFIGRFGHRLFICRALQQL*CPHPGA Trigger: AGCCCCTGGGTGTGGGCAGCATAGCTGCTGGAGGGC...ACGGCAGATGAACAACCTATGGCCAAAACGTCCAATAAATGTCTCTACCGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCCTTGGGGTCAAACATaGCAACCAGGCCATCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLPWGQT*QPGHRS Trigger: GCTACGATGGCCTGGTTGGCATGTTTGACCCCAAGG...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGATGCCACAAGCACCTaGGTCTCTGTGGTCCGTACC | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTDATST*VSVVRT Trigger: GGTACGGACCACAGAGACGCAGGTGCTTGTGGCATC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCCATCCTTGAGTTCCTaGTCACCAATGATGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLPSLSS*SPMMAT Trigger: GGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGG...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGTGTTTGCCTTCATCCTaGCCCAGCTGTGCCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLCLPSS*PSCAFS Trigger: ACTGAAGGCACAGCTGGGCCAGGATGAAGGCAAACA...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCTGCATCAGGAATCATaGGGTCGAACTGTCCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLLHQES*GRTVRQ Trigger: TTGCCGGACAGTTCGACCCCATGATTCCTGATGCAG...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCACCTGCGTCTCTGTaGTCCGTACCTTTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTAPASL*SVPFPL Trigger: CAGAGGAAAAGGTACGGACCACAGAGACGCAGGTGC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR CCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTAATGATGGCCACCAGTaGGATGCCACAAGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTNDGHQ*DATSTC Trigger: GCAGGTGCTTGTGGCATCCCACTGGTGGCCATCATT...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS-3UTR CCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCTCAGCTCAGCAGGTaGAGAGGGGCTGATTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTAQLSR*RGADLF Trigger: GAACAAATCAGCCCCTCTCCACCTGCTGAGCTGAGC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS-3UTR TCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGTTGCCGATCTGAAGTaGACTCAGGATCTCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTVADLK*TQDLAH Trigger: ATGTGCGAGATCCTGAGTTCACTTCAGATCGGCAAC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR TCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCAGGTGGAGAGGGGCTaGTTTGTTCTTCTTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLQVERG*FVLLLI Trigger: AATCAGAAGAAGAACAAATCAGCCCCTCTCCACCTG...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGCACAAACTTCTGTTTaGCTTCATCCTGGCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTAQTSV*LHPGPA Trigger: AGCTGGGCCAGGATGAAGGCAAACAGAAGTTTGTGC...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | GCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCAGCACCTGCGTCTCTGTaGTCCGTACCTTTTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AIGCSSAVWFFNEAISSPAPASL*SVPFPL Trigger: CAGAGGAAAAGGTACGGACCACAGAGACGCAGGTGC...TGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCGGATCCTGCAGTAACTaGTCCACCAGAGAAACCCCA | + |
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Preference number: 4 (lower is better) Translates to: AVWFFNEAISSPYRNLGGGSCSN*STRETP Trigger: TGGGGTTTCTCTGGTGGAGCAGTTACTGCAGGATCC...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | AATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCAGAGACGTGGTTAGTCCTTGGGGTCAAACATaGCAACCAGGCCATCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: NEAISSPYRNLGGRDVVSPWGQT*QPGHRS Trigger: GCTACGATGGCCTGGTTGGCATGTTTGACCCCAAGG...ACTAACCACGTCTCTGCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCCAGCAGCTTCTTCTGTaGAGATGCCACAAGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: AVWFFNEAISSPYRNLGGQQLLL*RCHKHL Trigger: CAGGTGCTTGTGGCATCTGCACAGAAGAAGCTGCTG...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | AGTCTTCTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGACTGAGCCCAACGCATaGCACCTTGCGCCCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLLLDGKYADCLSTYAVLTEPNA*HLAPLG Trigger: CCCAAGGGGCGCAAGGTGCCATGCGTTGGGCTCAGT...CAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR TCA 90 bp | GCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATGCCCTTGGGGGTTTTaGGCACAAACTTCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: AIGCSSAVWFFNEAISSPCPWGF*AQTSVC Trigger: GCAAACAGAAGTTTGTGCTCAAAACCCCCAAGGGCA...TGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR TCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGGTCATAGATAAGCTTTaGGTCTTCTCCGTACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLVIDKL*VFSVLS Trigger: GGAAAGTACGGAGAAGACTCAAAGCTTATCTATGAC...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | AATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCAGAGACGTGGTTAGTCCATCCTTGAGTTCCTaGTCACCAATGATGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: NEAISSPYRNLGGRDVVSPSLSS*SPMMAT Trigger: GGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGG...ACTAACCACGTCTCTGCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGATCTTTGCTCTACAATaGAAAAGATCCGCTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLIFALQ*KRSAPL Trigger: GAGTGGAGCGGATCTTTTCCATTGTAGAGCAAAGAT...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTCCGGCGATACACCTTTaGTATATGGTAGCGTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTPAIHL*YMVAFN Trigger: ATTAAACGCTACCATATAGCAAAGGTGTATCGCCGG...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTTCTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTATCAGCCACTTCCGGTaGAAGGCCCTTCTCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QSSAGWQICRLFKYICSFISHFR*KALLSH Trigger: GTGGGAGAGAAGGGCCTTGCACCGGAAGTGGCTGAT...AAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | CTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGGGCTCTTCCCCAGCTTaGGTTGGCATCTGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLDGKYADCLSTYAVLFSGSSPA*VGICSS Trigger: GCTGCTACAGATGCCAACCCAAGCTGGGGAAGAGCC...CGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CCA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTTCACAGTACTGCAACTaGTTTAGTAACTTCGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SLCSDHPSVFCWMANMQTSQYCN*FSNFGF Trigger: GAACCCGAAGTTACTAAACCAGTTGCAGTACTGTGA...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR TCA 90 bp | CTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGTTCGTTCCTGCTCACCAATaGTGGCCACCAGTGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: LDGKYADCLSTYAVLFSFVPAHQ*WPPVGC Trigger: GCATCCCACTGGTGGCCATCATTGGTGAGCAGGAAC...GAACGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | TGTCTCTATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATTCAGCGGACGCTTTCTaGTCCTTAAGGCCCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: CLYFCSPSAFHPNACKFDSADAF*SLRPLT Trigger: TGTGAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGA...ATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATAGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGGAAGCCTCTAATCTTTaGTCTACAATGGAAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: ASVLTTLQSSAGWQICRLEASNL*STMEKI Trigger: GATCTTTTCCATTGTAGAGCAAAGATTAGAGGCTTC...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS-3UTR GCA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCGCCTCCTCACAGTACTaGAACTGGTTTAGTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: AVWFFNEAISSPYRNLGGASSQY*NWFSNF Trigger: GAAGTTACTAAACCAGTTGCAGTACTGTGAGGAGGC...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | CTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGCACCAGTGGGATGCCTaGCTCCTCACAGTACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLDGKYADCLSTYAVLFSHQWDA*LLTVLQ Trigger: TTGCAGTACTGTGAGGAGGCAGGCATCCCACTGGTG...CGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR GCA 90 bp | CTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGTTCTGGCCACCAGTGGGATaGCTGCCTCCTCACAGTACT | + |
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Preference number: 4 (lower is better) Translates to: LDGKYADCLSTYAVLFSFWPPVG*LPPHST Trigger: AGTACTGTGAGGAGGCAGGCATCCCACTGGTGGCCA...GAACGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR TCA 90 bp | GTCTCTATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATGTGCCCTTGGGGGTTTTaGGCACAAACTTCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSISVVPLLFIPMLVSLMCPWGF*AQTSVC Trigger: GCAAACAGAAGTTTGTGCTCAAAACCCCCAAGGGCA...CATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATAGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATGGCACAAACTTCTGTTTaGCTTCATCCTGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSISVVPLLFIPMLVSLMAQTSV*LHPGPA Trigger: AGCTGGGCCAGGATGAAGGCAAACAGAAGTTTGTGC...CATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS-3UTR GCA 90 bp | ATATGCAGTTTTGTTTTCGTTCAGTTAAGATCAATCCTGTTTCCTCTACTGGTTGATGCCACAAGCACCTaGGTCTCTGTGGTCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ICSFVFVQLRSILFPLLVDATST*VSVVRT Trigger: GGTACGGACCACAGAGACGCAGGTGCTTGTGGCATC...AACCAGTAGAGGAAACAGGATTGATCTTAACTGAACGAAAACAAAACTGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTTCTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTCTTCTTCTGTGCAGATaGCACAAGCACCTGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSSAGWQICRLFKYICSFLLLCR*HKHLRL Trigger: GAGACGCAGGTGCTTGTGGCATCTGCACAGAAGAAG...AAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CCA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCATCTTTGCTCTACAATaGAAAAGATCCGCTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: AVWFFNEAISSPYRNLGGIFALQ*KRSAPL Trigger: GAGTGGAGCGGATCTTTTCCATTGTAGAGCAAAGAT...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGTTCACAGCAGCTCAGCCTTaGTCCCAGCATCCCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: LDGKYADCLSTYAVLFSFTAAQP*SQHPIT Trigger: AGTTATGGGATGCTGGGATCAAGGCTGAGCTGCTGT...GAACGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCGGTAGAGACATTTATTGGACGTTTTGGCCATAGGTTGTTCATCTGCCGTGGTCAGTTTATTCATTaGCAGATAGCGAGCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVETFIGRFGHRLFICRGQFIH*QIASKR Trigger: CCTTTTGCTCGCTATCTGGCAATGAATAAACTGACC...ACGGCAGATGAACAACCTATGGCCAAAACGTCCAATAAATGTCTCTACCGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CCA 90 bp | TATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATGTAGTTTGTTTGCCTTCATCCTaGCCCAGCTGTGCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YFCSPSAFHPNACKFDVVCLPSS*PSCAFS Trigger: ACTGAAGGCACAGCTGGGCCAGGATGAAGGCAAACA...AACTACATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCTTCTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGAGAGTTTAGGATCCTaGAGTAACTGCTCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSAGWQICRLFKYICSFESLGS*SNCSTR Trigger: TCTGGTGGAGCAGTTACTGCAGGATCCTAAACTCTC...AAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CCA 90 bp | CTCTATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATGTAAGGTCGAAGCTGGCCTaGTCTTTAGTTCAAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LYFCSPSAFHPNACKFDVRSKLA*SLVQTQ Trigger: CTGTGTTTGAACTAAAGACCAGGCCAGCTTCGACCT...TACATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS-3UTR TCA 90 bp | ATATGCAGTTTTGTTTTCGTTCAGTTAAGATCAATCCTGTTTCCTCTACTGGTTAGGAAGTTGCCGATCTaGAGTGAACTCAGGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ICSFVFVQLRSILFPLLVRKLPI*SELRIS Trigger: CGAGATCCTGAGTTCACTTCAGATCGGCAACTTCCT...AACCAGTAGAGGAAACAGGATTGATCTTAACTGAACGAAAACAAAACTGCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR GCA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCAGATCTTGTCATCAATaGCAAACAGGATTAGATACT | + |
|
Preference number: 4 (lower is better) Translates to: AVWFFNEAISSPYRNLGGRSCHQ*QTGLDT Trigger: AGTATCTAATCCTGTTTGGCATTGATGACAAGATCT...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR TCA 90 bp | ATATGCAGTTTTGTTTTCGTTCAGTTAAGATCAATCCTGTTTCCTCTACTGGTTCAGGTGGAGAGGGGCTaGTTTGTTCTTCTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ICSFVFVQLRSILFPLLVQVERG*FVLLLI Trigger: AATCAGAAGAAGAACAAATCAGCCCCTCTCCACCTG...AACCAGTAGAGGAAACAGGATTGATCTTAACTGAACGAAAACAAAACTGCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGTTCACAGCCTGTTTGTTTTaGGAGAGTTTAGGATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDGKYADCLSTYAVLFSFTACLF*ESLGSC Trigger: GCAGGATCCTAAACTCTCCCAAAACAAACAGGCTGT...GAACGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGGAAGCCTCTAATCTTTaGTCTACAATGGAAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLDGKYADCLSTYAVLFSEASNL*STMEKI Trigger: GATCTTTTCCATTGTAGAGCAAAGATTAGAGGCTTC...CGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS GCA 90 bp | CTGCTGGCCACCGAGCGGAGCTTGATGACGCCATCCTTGAGTTCCTaGTCACCAATGATGGCCACCAGTGGGATGCCTGCCTCCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLATERSLMTPSLSS*SPMMATSGMPASSQ Trigger: CTGTGAGGAGGCAGGCATCCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS GCA 90 bp | CTGCTGGCCACCGAGCGGAGCTTGATGACGCCATCCTTGAGTTCCTaGTCACCAATGATGGCCACCAGTGGGATGCCACAAGCACCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLATERSLMTPSLSS*SPMMATSGMPQAPA Trigger: CGCAGGTGCTTGTGGCATCCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
||
| CDS GCA 90 bp | TCGATCTGCTCAGCGGACGCTTTCTGCTCCTTAAGGCCCCTCACATaGGCTCCCTGGAGTCGTACCAGCTCCTCCAGAGCAGCACGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SICSADAFCSLRPLT*APWSRTSSSRAARS Trigger: AGATCGTGCTGCTCTGGAGGAGCTGGTACGACTCCAGGGAGCGCATGTGAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGAGCAGATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
||
| CDS GCA 90 bp | AGGAGTTTCGTCACCTCCTCCTCGATCTGCTCAGCGGACGCTTTCTaGTCCTTAAGGCCCCTCACATGCGCTCCCTGGAGTCGTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSFVTSSSICSADAF*SLRPLTCAPWSRTS Trigger: GCTGGTACGACTCCAGGGAGCGCATGTGAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGAGCAGATCGAGGAGGAGGTGACGAAACTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
||
| CDS GCA 90 bp | AGCTGTGCCTTCAGTTTTAGGAGTTTCGTCACCTCCTCCTCGATCTaGTCAGCGGACGCTTTCTGCTCCTTAAGGCCCCTCACATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCAFSFRSFVTSSSI*SADAFCSLRPLTCA Trigger: AGCGCATGTGAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGAGCAGATCGAGGAGGAGGTGACGAAACTCCTAAAACTGAAGGCACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
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| CDS-3UTR CAA 90 bp | AGCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTCCAACGCATGGCACCTaGCGCCCCTTGGGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLCSDHPSVFCWMANMQTPTHGT*RPLGSN Trigger: GTTTGACCCCAAGGGGCGCAAGGTGCCATGCGTTGG...AGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGGCCACCGAGCGGAGCTaGATGACGCCATCCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASVLTTLQSSAGWQICRLATERS*MTPSLS Trigger: ACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGC...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
||
| CDS GCA 90 bp | CCCAAGCCCTCTACAGCCTGTTTGTTTTGGGAGAGTTTAGGATCCTaGAGTAACTGCTCCACCAGAGAAACCCCACCATGCTGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PKPSTACLFWESLGS*SNCSTRETPPCCWT Trigger: TGTCCAGCAGCATGGTGGGGTTTCTCTGGTGGAGCAGTTACTGCAGGATCCTAAACTCTCCCAAAACAAACAGGCTGTAGAGGGCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS CCA 90 bp | ATGATGGCCACCAGTGGGATGCCTGCCTCCTCACAGTACTGCAACTaGTTTAGTAACTTCGGGTTCTTCTTGTACAGCAGCTCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MMATSGMPASSQYCN*FSNFGFFLYSSSAL Trigger: CAAGGCTGAGCTGCTGTACAAGAAGAACCCGAAGTTACTAAACCAGTTGCAGTACTGTGAGGAGGCAGGCATCCCACTGGTGGCCATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGGTTTCCTCTACTGGTTaGCTCAGCTCAGCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASVLTTLQSSAGWQICRLVSSTG*LSSAGG Trigger: TCCACCTGCTGAGCTGAGCAAACCAGTAGAGGAAAC...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS GCA 90 bp | TCACCAATGATGGCCACCAGTGGGATGCCTGCCTCCTCACAGTACTaGAACTGGTTTAGTAACTTCGGGTTCTTCTTGTACAGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPMMATSGMPASSQY*NWFSNFGFFLYSSS Trigger: TGAGCTGCTGTACAAGAAGAACCCGAAGTTACTAAACCAGTTGCAGTACTGTGAGGAGGCAGGCATCCCACTGGTGGCCATCATTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | GCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCACTTCCCCAGCTTGGGTaGGCATCTGTAGCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AIGCSSAVWFFNEAISSPLPQLG*ASVAAL Trigger: CAGTGCTGCTACAGATGCCAACCCAAGCTGGGGAAG...TGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS-3UTR CAA 90 bp | GCCTCTGTTCTGACCACCCTTCAGTCTTCTGCTGGATGGCAAATATGCAGACTGTTGATGACGCCATCCTaGAGTTCCTGCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ASVLTTLQSSAGWQICRLLMTPS*SSCSPM Trigger: CATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAA...CAGTCTGCATATTTGCCATCCAGCAGAAGACTGAAGGGTGGTCAGAACAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCGGTAGAGACATTTATTGGACGTTTTGGCCATAGGTTGTTCATCTGCCGTGCCACCGAGCGGAGCTaGATGACGCCATCCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVETFIGRFGHRLFICRATERS*MTPSLS Trigger: ACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGC...ACGGCAGATGAACAACCTATGGCCAAAACGTCCAATAAATGTCTCTACCGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS TCA 90 bp | CTGTTTCCTCTACTGGTTTGCTCAGCTCAGCAGGTGGAGAGGGGCTaGTTTGTTCTTCTTCTGATTTCCTCCACAAGGTCTTCTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFPLLVCSAQQVERG*FVLLLISSTRSSLR Trigger: CCGAAGAGAAGACCTTGTGGAGGAAATCAGAAGAAGAACAAATCAGCCCCTCTCCACCTGCTGAGCTGAGCAAACCAGTAGAGGAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
||
| CDS CCA 90 bp | TCAGAGGCCAGAGGCAGGTACATCTCTCTGAGGTCGAAGCTGGCCTaGTCTTTAGTTCAAACACAGGTGTATCAATCACTTCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SEARGRYISLRSKLA*SLVQTQVYQSLLLH Trigger: ATGGAGCAGAAGTGATTGATACACCTGTGTTTGAACTAAAGACCAGGCCAGCTTCGACCTCAGAGAGATGTACCTGCCTCTGGCCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS TCA 90 bp | TCTAGGATGCGCCTGTCGTTTACCTTGACCAGGAAGTTGCCGATCTaGAGTGAACTCAGGATCTCGCACATAATCTTTAGGCACTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRMRLSFTLTRKLPI*SELRISHIIFRHSA Trigger: TGCAGAGTGCCTAAAGATTATGTGCGAGATCCTGAGTTCACTTCAGATCGGCAACTTCCTGGTCAAGGTAAACGACAGGCGCATCCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS GCA 90 bp | GTAACGGCCTCGGGTCATAGCTGGGTTGTCCCGGCGATACACCTTTaGTATATGGTAGCGTTTAATGTTGGTCAGTTTATTCATTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTASGHSWVVPAIHL*YMVAFNVGQFIHCQ Trigger: CTGGCAATGAATAAACTGACCAACATTAAACGCTACCATATAGCAAAGGTGTATCGCCGGGACAACCCAGCTATGACCCGAGGCCGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS GCA 90 bp | TGCGTCTCTGTGGTCCGTACCTTTTCCTCTGAAGCCTCTAATCTTTaGTCTACAATGGAAAAGATCCGCTCCACTCCAATACTGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CVSVVRTFSSEASNL*STMEKIRSTPILSP Trigger: TGGGCTCAGTATTGGAGTGGAGCGGATCTTTTCCATTGTAGAGCAAAGATTAGAGGCTTCAGAGGAAAAGGTACGGACCACAGAGACGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
||
| CDS-3UTR CAA 90 bp | GCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCAAGCACAAACTTCTGTTaGCCTTCATCCTGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AIGCSSAVWFFNEAISSPSTNFC*PSSWPS Trigger: GCTGGGCCAGGATGAAGGCAAACAGAAGTTTGTGCT...TGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCAGAGACGTGGTTAGTGAAACCTTGTCTAGCTaGTCCACCGAGGAGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NEAISSPYRNLGGRDVVSETLSS*STEEQM Trigger: CATCTGCTCCTCGGTGGACAAGCTAGACAAGGTTTC...ACTAACCACGTCTCTGCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCAACTTCGGGTTCTTCTaGTACAGCAGCTCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVWFFNEAISSPYRNLGGNFGFF*YSSSAL Trigger: CAAGGCTGAGCTGCTGTACAAGAAGAACCCGAAGTT...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | GCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATTGATGACGCCATCCTaGAGTTCCTGCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AIGCSSAVWFFNEAISSPLMTPS*SSCSPM Trigger: CATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAA...TGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS CCA 90 bp | AAAATCGCATTGATAGAATTCACGGTAACGGCCTCGGGTCATAGCTaGGTTGTCCCGGCGATACACCTTTGCTATATGGTAGCGTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KIALIEFTVTASGHS*VVPAIHLCYMVAFN Trigger: ATTAAACGCTACCATATAGCAAAGGTGTATCGCCGGGACAACCCAGCTATGACCCGAGGCCGTTACCGTGAATTCTATCAATGCGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | ATATGCAGTTTTGTTTTCGTTCAGTTAAGATCAATCCTGTTTCCTCTACTGGTTCCAACGCATGGCACCTaGCGCCCCTTGGGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ICSFVFVQLRSILFPLLVPTHGT*RPLGSN Trigger: GTTTGACCCCAAGGGGCGCAAGGTGCCATGCGTTGG...AACCAGTAGAGGAAACAGGATTGATCTTAACTGAACGAAAACAAAACTGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATGAGCACAAACTTCTGTTaGCCTTCATCCTGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSISVVPLLFIPMLVSLMSTNFC*PSSWPS Trigger: GCTGGGCCAGGATGAAGGCAAACAGAAGTTTGTGCT...CATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATACAGGAATTTAGGAGGCTACAGCCTGTTTGTTTaGGGAGAGTTTAGGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVWFFNEAISSPYRNLGGYSLFV*GEFRIL Trigger: CAGGATCCTAAACTCTCCCAAAACAAACAGGCTGTA...GCCTCCTAAATTCCTGTATGGACTTGAGATGGCTTCATTGAAAAACCACACGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCTATTTCTGTAGTCCCTCTGCTTTTCATCCCAATGCTTGTAAGTTTGATGGTGCCCTTGGGGGTTTaGAGCACAAACTTCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSISVVPLLFIPMLVSLMVPLGV*STNFCL Trigger: CAAACAGAAGTTTGTGCTCAAAACCCCCAAGGGCAC...CATCAAACTTACAAGCATTGGGATGAAAAGCAGAGGGACTACAGAAATAGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235863.2 |
||
| CDS-3UTR CAA 90 bp | GCCATAGGTTGTTCATCTGCCGTGTGGTTTTTCAATGAAGCCATCTCAAGTCCATGGTCAGTTTATTCATaGCCAGATAGCGAGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AIGCSSAVWFFNEAISSPWSVYS*PDSEQK Trigger: CTTTTGCTCGCTATCTGGCAATGAATAAACTGACCA...TGGACTTGAGATGGCTTCATTGAAAAACCACACGGCAGATGAACAACCTATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTACAGCAGCTCAGCCTaGATCCCAGCATCCCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLDGKYADCLSTYAVLYSSSA*IPASHN Trigger: GTTATGGGATGCTGGGATCAAGGCTGAGCTGCTGTA...CAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGGTGCCCTTGGGGGTTTaGAGCACAAACTTCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLDGKYADCLSTYAVLVPLGV*STNFCL Trigger: CAAACAGAAGTTTGTGCTCAAAACCCCCAAGGGCAC...CAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAGAAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTGGATGGCAAATATGCAGACTGTTTAAGTACATATGCAGTTTTGTTTTCGCCCTCTACAGCCTGTTaGTTTTGGGAGAGTTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: LLDGKYADCLSTYAVLFSPSTAC*FWESLG Trigger: TCCTAAACTCTCCCAAAACAAACAGGCTGTAGAGGG...CGAAAACAAAACTGCATATGTACTTAAACAGTCTGCATATTTGCCATCCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CAA 90 bp | ACCTCCTCTCTGCTGGCCACCGAGCGGAGCTTGATGACGCCATCCTaGAGTTCCTGCTCACCAATGATGGCCACCAGTGGGATGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TSSLLATERSLMTPS*SSCSPMMATSGMPA Trigger: GGCAGGCATCCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGCCAGCAGAGAGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS GCA 72 bp | TCAGCGGACGCTTTCTGCTCCTTAAGGCCCCTCACATaGGCTCCCTGGAGTCGTACCAGCTCCTCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SADAFCSLRPLT*APWSRTSSSRA Trigger: TGCTCTGGAGGAGCTGGTACGACTCCAGGGAGCGCATGTGAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
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| CDS CAA 72 bp | CGCTCCACTCCAATACTGAGCCCAACGCATGGCACCTaGCGCCCCTTGGGGTCAAACATGCCAACCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RSTPILSPTHGT*RPLGSNMPTRP Trigger: TGGCCTGGTTGGCATGTTTGACCCCAAGGGGCGCAAGGTGCCATGCGTTGGGCTCAGTATTGGAGTGGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS CAA 72 bp | CTGCTGGCCACCGAGCGGAGCTTGATGACGCCATCCTaGAGTTCCTGCTCACCAATGATGGCCACCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLATERSLMTPS*SSCSPMMATSG Trigger: CCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS GCA 72 bp | ACCGAGCGGAGCTTGATGACGCCATCCTTGAGTTCCTaGTCACCAATGATGGCCACCAGTGGGATGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TERSLMTPSLSS*SPMMATSGMPA Trigger: GGCAGGCATCCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CCA 72 bp | GCTTTCTGCTCCTTAAGGCCCCTCACATGCGCTCCCTaGAGTCGTACCAGCTCCTCCAGAGCAGCACGATCT | + |
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Preference number: 6 (lower is better) Translates to: AFCSLRPLTCAP*SRTSSSRAARS Trigger: AGATCGTGCTGCTCTGGAGGAGCTGGTACGACTCCAGGGAGCGCATGTGAGGGGCCTTAAGGAGCAGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
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| CDS CAA 90 bp | ACCTCCTCTCTGCTGGCCACCGAGCGGAGCTTGATGACGCCATCCTaGAGTTCCTGCTCACCAATGATGGCCACCAGTGGGATGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: TSSLLATERSLMTPS*SSCSPMMATSGMPQ Trigger: TTGTGGCATCCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGCCAGCAGAGAGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS CAA 72 bp | ACATCCACCTCCTCTCTGCTGGCCACCGAGCGGAGCTaGATGACGCCATCCTTGAGTTCCTGCTCACCAATG | + |
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Preference number: 6 (lower is better) Translates to: TSTSSLLATERS*MTPSLSSCSPM Trigger: CATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGTGGCCAGCAGAGAGGAGGTGGATGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235494.2 |
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| CDS GCA 72 bp | ACCAATGATGGCCACCAGTGGGATGCCACAAGCACCTaGGTCTCTGTGGTCCGTACCTTTTCCTCTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: TNDGHQWDATST*VSVVRTFSSEA Trigger: GGCTTCAGAGGAAAAGGTACGGACCACAGAGACGCAGGTGCTTGTGGCATCCCACTGGTGGCCATCATTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS GCA 72 bp | ACCGAGCGGAGCTTGATGACGCCATCCTTGAGTTCCTaGTCACCAATGATGGCCACCAGTGGGATGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: TERSLMTPSLSS*SPMMATSGMPQ Trigger: TTGTGGCATCCCACTGGTGGCCATCATTGGTGAGCAGGAACTCAAGGATGGCGTCATCAAGCTCCGCTCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS GCA 72 bp | TCCAGCAGCTTCTTCTGTGCAGATGCCACAAGCACCTaGGTCTCTGTGGTCCGTACCTTTTCCTCTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSFFCADATST*VSVVRTFSSEA Trigger: GGCTTCAGAGGAAAAGGTACGGACCACAGAGACGCAGGTGCTTGTGGCATCTGCACAGAAGAAGCTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS GCA 72 bp | TTCAGTTTTAGGAGTTTCGTCACCTCCTCCTCGATCTaGTCAGCGGACGCTTTCTGCTCCTTAAGGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSFRSFVTSSSI*SADAFCSLRPL Trigger: GAGGGGCCTTAAGGAGCAGAAAGCGTCCGCTGAGCAGATCGAGGAGGAGGTGACGAAACTCCTAAAACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
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| CDS GCA 72 bp | ATGGCCACCAGTGGGATGCCTGCCTCCTCACAGTACTaGAACTGGTTTAGTAACTTCGGGTTCTTCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: MATSGMPASSQY*NWFSNFGFFLY Trigger: GTACAAGAAGAACCCGAAGTTACTAAACCAGTTGCAGTACTGTGAGGAGGCAGGCATCCCACTGGTGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CCA 72 bp | ACCAGTGGGATGCCTGCCTCCTCACAGTACTGCAACTaGTTTAGTAACTTCGGGTTCTTCTTGTACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TSGMPASSQYCN*FSNFGFFLYSS Trigger: GCTGCTGTACAAGAAGAACCCGAAGTTACTAAACCAGTTGCAGTACTGTGAGGAGGCAGGCATCCCACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CAA 72 bp | CATGGGGTCGAACTGTCCGGCAATGTCAAAATCGCATaGATAGAATTCACGGTAACGGCCTCGGGTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: HGVELSGNVKIA*IEFTVTASGHS Trigger: GCTATGACCCGAGGCCGTTACCGTGAATTCTATCAATGCGATTTTGACATTGCCGGACAGTTCGACCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS TCA 72 bp | CTACTGGTTTGCTCAGCTCAGCAGGTGGAGAGGGGCTaGTTTGTTCTTCTTCTGATTTCCTCCACAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLVCSAQQVERG*FVLLLISSTRS Trigger: AGACCTTGTGGAGGAAATCAGAAGAAGAACAAATCAGCCCCTCTCCACCTGCTGAGCTGAGCAAACCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235494.2 |
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| CDS CCA 72 bp | TTGATAGAATTCACGGTAACGGCCTCGGGTCATAGCTaGGTTGTCCCGGCGATACACCTTTGCTATATGGTA | + |
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Preference number: 6 (lower is better) Translates to: LIEFTVTASGHS*VVPAIHLCYMV Trigger: TACCATATAGCAAAGGTGTATCGCCGGGACAACCCAGCTATGACCCGAGGCCGTTACCGTGAATTCTATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS TCA 72 bp | CGCCTGTCGTTTACCTTGACCAGGAAGTTGCCGATCTaGAGTGAACTCAGGATCTCGCACATAATCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: RLSFTLTRKLPI*SELRISHIIFR Trigger: CCTAAAGATTATGTGCGAGATCCTGAGTTCACTTCAGATCGGCAACTTCCTGGTCAAGGTAAACGACAGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CAA 72 bp | CAGTACTGCAACTGGTTTAGTAACTTCGGGTTCTTCTaGTACAGCAGCTCAGCCTTGATCCCAGCATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: QYCNWFSNFGFF*YSSSALIPASH Trigger: ATGGGATGCTGGGATCAAGGCTGAGCTGCTGTACAAGAAGAACCCGAAGTTACTAAACCAGTTGCAGTACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CAA 90 bp | TTTAGTTCAAACACAGGTGTATCAATCACTTCTGCTCCATGGCGTTaGAAACAGCGGATGATGACATCAAACACCTTTTCCCGGACCGCC | + |
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Preference number: 6 (lower is better) Translates to: FSSNTGVSITSAPWR*KQRMMTSNTFSRTA Trigger: GGCGGTCCGGGAAAAGGTGTTTGATGTCATCATCCGCTGTTTCAAACGCCATGGAGCAGAAGTGATTGATACACCTGTGTTTGAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
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| CDS GCA 72 bp | TCGGGTCATAGCTGGGTTGTCCCGGCGATACACCTTTaGTATATGGTAGCGTTTAATGTTGGTCAGTTTATT | + |
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Preference number: 6 (lower is better) Translates to: SGHSWVVPAIHL*YMVAFNVGQFI Trigger: AATAAACTGACCAACATTAAACGCTACCATATAGCAAAGGTGTATCGCCGGGACAACCCAGCTATGACCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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| CDS CAA 72 bp | AACACAGGTGTATCAATCACTTCTGCTCCATGGCGTTaGAAACAGCGGATGATGACATCAAACACCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NTGVSITSAPWR*KQRMMTSNTFS Trigger: GGAAAAGGTGTTTGATGTCATCATCCGCTGTTTCAAACGCCATGGAGCAGAAGTGATTGATACACCTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001416.8 ENSMUST00000235863.2 |
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| CDS GCA 72 bp | TATATGGTAGCGTTTAATGTTGGTCAGTTTATTCATTaGCAGATAGCGAGCAAAAGGGACAGTAAGGTCATA | + |
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Preference number: 6 (lower is better) Translates to: YMVAFNVGQFIH*QIASKRDSKVI Trigger: TATGACCTTACTGTCCCTTTTGCTCGCTATCTGGCAATGAATAAACTGACCAACATTAAACGCTACCATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001416.8 |
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