Pregenerated sensors for HARBI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027243Ensembl transcript IDs: ENSMUST00000090608.6, ENSMUST00000111322.2, ENSMUST00000128140.2, ENSMUST00000140183.2, ENSMUST00000142692.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCACCCGTGATGAGATCTaGCGCCCTCTTCTGGTGTGTCTGGAGTCAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTTRDEI*RPLLVCLESATVYL Trigger: TAAGTACACTGTAGCTGACTCCAGACACACCAGAAGAGGGCGTCAGATCTCATCACGGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 90 bp | CCCTTTACTTTTGAGACAGGGTCTCCCTCTACATCCAGGTTGACCTaGACACTGTGTCTGGAACTTGAGAGCCTTTTGCCTCAGCCTACC | + |
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Preference number: 1 (lower is better) Translates to: PFTFETGSPSTSRLT*TLCLELESLLPQPT Trigger: GGTAGGCTGAGGCAAAAGGCTCTCAAGTTCCAGACACAGTGTTCAGGTCAACCTGGATGTAGAGGGAGACCCTGTCTCAAAAGTAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 90 bp | CCTAGCCCTTTACTTTTGAGACAGGGTCTCCCTCTACATCCAGGTTaGCCTGAACACTGTGTCTGGAACTTGAGAGCCTTTTGCCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: PSPLLLRQGLPLHPG*PEHCVWNLRAFCLS Trigger: GCTGAGGCAAAAGGCTCTCAAGTTCCAGACACAGTGTTCAGGTCAACCTGGATGTAGAGGGAGACCCTGTCTCAAAAGTAAAGGGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 90 bp | GCTGGCCTGGACCTTACTACGCAGCTAAGGATAACCTTGAATTCCTaGTCTTCCTTCCTTTACCCCAAGTGCTGGAGTTGTAGGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: AGLDLTTQLRITLNS*SSFLYPKCWSCRCV Trigger: TACACACCTACAACTCCAGCACTTGGGGTAAAGGAAGGAAGATCAGGAATTCAAGGTTATCCTTAGCTGCGTAGTAAGGTCCAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| 3UTR TCA 90 bp | TCTGAGTACTGGGAATGCAATTATGCACAACAGCCAACACAGTGCTaGGGACTGAACCCAGGACCTCCTACACTACTAACTAAGCTACAC | + |
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Preference number: 1 (lower is better) Translates to: SEYWECNYAQQPTQC*GLNPGPPTLLTKLH Trigger: GTGTAGCTTAGTTAGTAGTGTAGGAGGTCCTGGGTTCAGTCCTCAGCACTGTGTTGGCTGTTGTGCATAATTGCATTCCCAGTACTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR GCA 90 bp | AAATCTGCCTGCTTCTGCCTCCCAATTGCTGAGATTAAAGGCATGTaGCACCACTGCCCAGTGGTGGTATACACTTTTAATTCCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: KSACFCLPIAEIKGM*HHCPVVVYTFNSST Trigger: AGTGCTGGAATTAAAAGTGTATACCACCACTGGGCAGTGGTGGCACATGCCTTTAATCTCAGCAATTGGGAGGCAGAAGCAGGCAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 90 bp | TCCCAATTGCTGAGATTAAAGGCATGTGCCACCACTGCCCAGTGGTaGTATACACTTTTAATTCCAGCACTTGAGAGACCAAGGCAAATG | + |
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Preference number: 1 (lower is better) Translates to: SQLLRLKACATTAQW*YTLLIPALERPRQM Trigger: CATTTGCCTTGGTCTCTCAAGTGCTGGAATTAAAAGTGTATACCACCACTGGGCAGTGGTGGCACATGCCTTTAATCTCAGCAATTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 90 bp | AAAAGTAATAATAATGAAAGAACCCAGGCTGTTGAGATGGCTCAGTaGATAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: KSNNNERTQAVEMAQ*IRAPDCSSKGPEFK Trigger: TTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTATCCACTGAGCCATCTCAACAGCCTGGGTTCTTTCATTATTATTACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 90 bp | AGTAATACACCTATGGGGACAGCTAAGAATAATAGCAGGAAGGGATaGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGT | + |
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Preference number: 1 (lower is better) Translates to: SNTPMGTAKNNSRKG*LKWNLKWSVMVDTC Trigger: ACAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTGCTATTATTCTTAGCTGTCCCCATAGGTGTATTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 90 bp | TTGATTCCTAGTACAGGTATAATAATAAAAATAATCATGATGGGCTaGAGAGATGGCTCAGCGGGTAAGAGCACAGACTGTTCTTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LIPSTGIIIKIIMMG*RDGSAGKSTDCSSK Trigger: TTTGGAAGAACAGTCTGTGCTCTTACCCGCTGAGCCATCTCTCCAGCCCATCATGATTATTTTTATTATTATACCTGTACTAGGAATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 90 bp | ATATCGGTCTTAGGTATCTGTGTACAGTGTGCACATTTTACACTGTaGAGATCAGAAGAAAGTTTTAGGTTCCTTGGAACTAGAGTTATG | + |
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Preference number: 1 (lower is better) Translates to: ISVLGICVQCAHFTL*RSEESFRFLGTRVM Trigger: CATAACTCTAGTTCCAAGGAACCTAAAACTTTCTTCTGATCTCCACAGTGTAAAATGTGCACACTGTACACAGATACCTAAGACCGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTCAGCCTGGGGTTCACTaGACATTAGGGAAACACTGT | + |
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Preference number: 2 (lower is better) Translates to: EAEAGELLQAPGQPGLHSQPGVH*TLGKHC Trigger: ACAGTGTTTCCCTAATGTTCAGTGAACCCCAGGCTG...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGGGATGGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGGGCATGTGCCACCACTaGCCAGTGGTGGTATACACT | + |
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Preference number: 2 (lower is better) Translates to: QEGMAQMELKVECDGGYLGMCHH*PVVVYT Trigger: AGTGTATACCACCACTGGGCAGTGGTGGCACATGCC...CAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGGATGGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGGGTCCTTGCTGGGTGTaGTGGCAAGAAACAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: QEGMAQMELKVECDGGYLGPCWV*WQETNL Trigger: GAGGTTTGTTTCTTGCCACCACACCCAGCAAGGACC...CAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGGGATGGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGCTAGCCCTTTACTTTTaGGACAGGGTCTCCCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: QEGMAQMELKVECDGGYLLALYF*DRVSLY Trigger: GTAGAGGGAGACCCTGTCTCAAAAGTAAAGGGCTAG...CAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGCTGGAAGAGCAGTCAGTGCTCTTAACTACTGAGACATCTCTCCAGCCCATTGTCGGTTTATTCTaGAAAGCCTTCCTCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TVLEEQSVLLTTETSLQPIVGLF*KAFLLP Trigger: AGGGAGGAGGAAGGCTTTCCAGAATAAACCGACAAT...GGGCTGGAGAGATGTCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| 3UTR-3UTR TCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCACTGTGTCTGGAACTTaGGAGCCTTTTGCCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: NLRFSARAKYALNCWTSLTVSGT*EPFASA Trigger: GGCTGAGGCAAAAGGCTCTCAAGTTCCAGACACAGT...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTCCAGCAACCACATGGTaGCTCACAACCACCCGTGAT | + |
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Preference number: 2 (lower is better) Translates to: FASAYPVLGLQAYKITLSPATTW*LTTTRD Trigger: ATCACGGGTGGTTGTGAGCCACCATGTGGTTGCTGG...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTGTTGAGATGGCTCAGTaGATAAGAGCACCCGACTGC | + |
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Preference number: 2 (lower is better) Translates to: FASAYPVLGLQAYKITLSVEMAQ*IRAPDC Trigger: GCAGTCGGGTGCTCTTATCCACTGAGCCATCTCAAC...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCCTCTTCTGGTGTGTCTaGAGTCAGCTACAGTGTACT | + |
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Preference number: 2 (lower is better) Translates to: NLRFSARAKYALNCWTSLLFWCV*SQLQCT Trigger: AGTACACTGTAGCTGACTCCAGACACACCAGAAGAG...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTTTCTTCCAAAGGTCCTaGGTTCAAATCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: FASAYPVLGLQAYKITLSFFQRS*VQIPAT Trigger: GGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAA...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCTTGAACTCAGAAATCTaGCTGCTTCTGCCTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: NLRFSARAKYALNCWTSLLNSEI*LLLPPN Trigger: ATTGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCAA...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCCAGACAAAGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTCACTCTGACCACTGCCCAGTGGTaGTATACACTTTTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: FFQTKFLCVALDVLGLTLTTAQW*YTLLIP Trigger: TGGAATTAAAAGTGTATACCACCACTGGGCAGTGGT...CAGAGTGAGTCCCAGGACATCCAAGGCTACACAGAGAAACTTTGTCTGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTCATGTCTGAAAGCATaGCCTGGGGATTTCATACAC | + |
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Preference number: 2 (lower is better) Translates to: LAQIKTHSVSAKSPQNSVSCLKA*PGDFIH Trigger: GTGTATGAAATCCCCAGGTCATGCTTTCAGACATGA...GACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCTCTGAGTACTGGGAATaGAATTATGCACAACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: NLRFSARAKYALNCWTSLSEYWE*NYAQQP Trigger: TGGCTGTTGTGCATAATTGCATTCCCAGTACTCAGA...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCCAGCCTACCCTGTCTTaGGATTACAAGCGTATAAAA | + |
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Preference number: 2 (lower is better) Translates to: NLRFSARAKYALNCWTSLQPTLS*DYKRIK Trigger: TTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTG...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CAA 90 bp | GGGTTCAGTGGTAAAATCCTTGCCTGGCATTCCCACGCCTTGGGTTaGATTCCTAGTACAGGTATAATAATAAAAATAATCATGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: GFSGKILAWHSHALG*IPSTGIIIKIIMMG Trigger: GCCCATCATGATTATTTTTATTATTATACCTGTACTAGGAATCAAACCCAAGGCGTGGGAATGCCAGGCAAGGATTTTACCACTGAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CAA 90 bp | GTGCACATTTTACACTGTGGAGATCAGAAGAAAGTTTTAGGTTCCTaGGAACTAGAGTTATGGGTATTGGTGAGCCTCTATGTGGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VHILHCGDQKKVLGS*ELELWVLVSLYVGD Trigger: ATCACCCACATAGAGGCTCACCAATACCCATAACTCTAGTTCCAAGGAACCTAAAACTTTCTTCTGATCTCCACAGTGTAAAATGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGGCATGTGCCACCACTGCCCAGTGGTGGTATACACTTTTAATTCCAGCAAGGCTAAACAAAGAATaGAGAGTAAGACTACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LKACATTAQWWYTLLIPARLNKE*RVRLQN Trigger: GTTCTGTAGTCTTACTCTTCATTCTTTGTTTAGCCT...TGCTGGAATTAAAAGTGTATACCACCACTGGGCAGTGGTGGCACATGCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTTTTAATTCCAGCACTTaGGAGACCAAGGCAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: FASAYPVLGLQAYKITLSFNSST*ETKANE Trigger: TTCATTTGCCTTGGTCTCTCAAGTGCTGGAATTAAA...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTACTGTTTCTTTCTTTCAGTTCTAGGGATCAATACATCACACATGCTAGGAGATCTCCAGACAACTaGAACAACAAAACTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VLLFLSFSSRDQYITHARRSPDN*NNKTLW Trigger: CCAAAGAGTTTTGTTGTTTCAGTTGTCTGGAGATCT...CCTAGCATGTGTGATGTATTGATCCCTAGAACTGAAAGAAAGAAACAGTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| 3UTR-3UTR CCA 90 bp | AATACATCACACATGCTAGGCAAGTGCTCACTTACTTATATTAGATCATTTCTCAACAACAAAACTCTTTaGCTGTATGCTGTTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: NTSHMLGKCSLTYIRSFLNNKTL*LYAVFS Trigger: GGAGAAAACAGCATACAGCCAAAGAGTTTTGTTGTT...GAGAAATGATCTAATATAAGTAAGTGAGCACTTGCCTAGCATGTGTGATGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCACCCGTGATGAGATCTaGCGCCCTCTTCTGGTGTGTCTGGAGTCAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTTRDEI*RPLLVCLESAT Trigger: TGTAGCTGACTCCAGACACACCAGAAGAGGGCGTCAGATCTCATCACGGGTGGTTGTGAGCCACCATGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 72 bp | TTTGAGACAGGGTCTCCCTCTACATCCAGGTTGACCTaGACACTGTGTCTGGAACTTGAGAGCCTTTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: FETGSPSTSRLT*TLCLELESLLP Trigger: AGGCAAAAGGCTCTCAAGTTCCAGACACAGTGTTCAGGTCAACCTGGATGTAGAGGGAGACCCTGTCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 72 bp | ATCACCCTGAATTCTGATACTCCTGCCTCTGAGTACTaGGAATGCAATTATGCACAACAGCCAACACAGTGC | + |
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Preference number: 3 (lower is better) Translates to: ITLNSDTPASEY*ECNYAQQPTQC Trigger: GCACTGTGTTGGCTGTTGTGCATAATTGCATTCCCAGTACTCAGAGGCAGGAGTATCAGAATTCAGGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 72 bp | CCTATGGGGACAGCTAAGAATAATAGCAGGAAGGGATaGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: PMGTAKNNSRKG*LKWNLKWSVMV Trigger: CACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTGCTATTATTCTTAGCTGTCCCCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CAA 90 bp | AAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCACACTTCAGATCTCTGTGGGTTaGAAGTCAGCCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: KTHSVSAKSPQNSVFFTLQISVG*KSAWST Trigger: TGTAGACCAGGCTGACTTCAAACCCACAGAGATCTG...AAGTGTGAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTGCTTCTGCCTCCCAATaGCTGAGATTAAAGGCATGT | + |
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Preference number: 3 (lower is better) Translates to: FASAYPVLGLQAYKITLSASASQ*LRLKAC Trigger: ACATGCCTTTAATCTCAGCAATTGGGAGGCAGAAGC...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 72 bp | TACAGTGCTGGAAGAGCAGTCAGTGCTCTTAACTACTaGGACATCTCTCCAGCCCTTCTCTTTAGTTTTACT | + |
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Preference number: 3 (lower is better) Translates to: YSAGRAVSALNY*DISPALLFSFT Trigger: AGTAAAACTAAAGAGAAGGGCTGGAGAGATGTCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGCACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| 3UTR TCA 72 bp | ATTCCAGCACTTGAGAGACCAAGGCAAATGAATCTTTaGGTCCAAGGCTGGCTACATGTAAAATTCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: IPALERPRQMNL*VQGWLHVKFQA Trigger: AGCCTGGAATTTTACATGTAGCCAGCCTTGGACTCAAAGATTCATTTGCCTTGGTCTCTCAAGTGCTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGGGATGGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGAAAGTTTTAGGTTCCTaGGAACTAGAGTTATGGGTA | + |
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Preference number: 3 (lower is better) Translates to: QEGMAQMELKVECDGGYLKVLGS*ELELWV Trigger: TACCCATAACTCTAGTTCCAAGGAACCTAAAACTTT...CAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGGGATGGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGTTATGTGTAGAATTGTaGTGCCCACGTGTATATATG | + |
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Preference number: 3 (lower is better) Translates to: QEGMAQMELKVECDGGYLLCVEL*CPRVYM Trigger: CATATATACACGTGGGCACAACAATTCTACACATAA...CAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 72 bp | AACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTaGACATTAGGGAAACACTGTCTTGATTTTGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: NFPKNSAQPGVH*TLGKHCLDFGL Trigger: TAGACCAAAATCAAGACAGTGTTTCCCTAATGTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| 3UTR CCA 72 bp | ACAAGTGTTCTTTTTCTATTTTCTAATCCCAGCACTTaGGGTCATGTATCACAGGCTAGCCTCAAGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: TSVLFLFSNPST*GHVSQASLKLP Trigger: AGGAAGCTTGAGGCTAGCCTGTGATACATGACCCCAAGTGCTGGGATTAGAAAATAGAAAAAGAACACTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 72 bp | ACAGCTAAGAATAATAGCAGGAAGGGATGGCTCAAATaGAACTTAAAGTGGAGTGTGATGGTGGATACCTGT | + |
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Preference number: 3 (lower is better) Translates to: TAKNNSRKGWLK*NLKWSVMVDTC Trigger: ACAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTGCTATTATTCTTAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR TCA 72 bp | AGGAACACTTCTAATTTTACTATTAAGTTTCATGTCTaGAAGCATGACCTGGGGATTTCATACACTCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: RNTSNFTIKFHV*KHDLGISYTLP Trigger: CGGGAGAGTGTATGAAATCCCCAGGTCATGCTTTCAGACATGAAACTTAATAGTAAAATTAGAAGTGTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| 3UTR TCA 72 bp | ATTAGGATTAGATGGGGAACGGATTATAAATGCTTATaGGATCACCCAGTCAACCATAAGAAATTCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: IRIRWGTDYKCL*DHPVNHKKFWE Trigger: CTCCCAGAATTTCTTATGGTTGACTGGGTGATCTCATAAGCATTTATAATCCGTTCCCCATCTAATCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| 3UTR CCA 72 bp | AGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTaGACATCTCTCCTCAACCTACGTTTTTCAATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RFSARAKYALNC*TSLLNLRFSIL Trigger: TAAAATTGAAAAACGTAGGTTGAGGAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| 3UTR TCA 72 bp | TCCAACAAACATACAAAACCCCAAAGGTTTCTGATCTaGCACAAATGCTATAGAATGTATGCACCAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: SNKHTKPQRFLI*HKCYRMYAPNT Trigger: AGTGTTTGGTGCATACATTCTATAGCATTTGTGTCAGATCAGAAACCTTTGGGGTTTTGTATGTTTGTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| 3UTR GCA 72 bp | TTTATGTATATCGGTCTTAGGTATCTGTGTACAGTGTaGACATTTTACACTGTGGAGATCAGAAGAAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FMYIGLRYLCTV*TFYTVEIRRKF Trigger: AAACTTTCTTCTGATCTCCACAGTGTAAAATGTGCACACTGTACACAGATACCTAAGACCGATATACATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTCAGGGGGCTGGTCAATaGGTCCAGGCACTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGELLQAPGQPGLHSQGAGQ*VQALER Trigger: CCTCTCCAGTGCCTGGACCCATTGACCAGCCCCCTG...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTGTCCTGGAGGCTACCTaGCCAGCTTGTCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGELLQAPGQPGLHSVLEAT*PACLHS Trigger: ACTGTGGAGACAAGCTGGCCAGGTAGCCTCCAGGAC...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTGCTGCATTTCTCCGGTaGGTACTGCAGTGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGELLQAPGQPGLHSAAFLR*VLQCPF Trigger: AAAGGGGCACTGCAGTACTCACCGGAGAAATGCAGC...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | CGGGGATTTGTCTTCCCAGTGCTGAGAAGAGTAAGAGCTGTGTCTGCAGTAGCCCACCCCTATCACCCCTaGCATCCCTGCCAATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RGFVFPVLRRVRAVSAVAHPYHP*HPCQSI Trigger: TATGGATTGGCAGGGATGCCAGGGGTGATAGGGGTG...GGCTACTGCAGACACAGCTCTTACTCTTCTCAGCACTGGGAAGACAAATCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTGGAAGAGCAGTCAGTGCTCTTAACTACTGAGACATCTCTCCAGCCCAGCACAGCACAGTCCTaGAGGCTACCTGGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEEQSVLLTTETSLQPSTAQS*RLPGQL Trigger: AAGCTGGCCAGGTAGCCTCCAGGACTGTGCTGTGCT...GGGCTGGAGAGATGTCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTCTACAGCAGAGGGTCTaGAACGTCCTCTCAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGELLQAPGQPGLHSLQQRV*NVLSIT Trigger: TGTGATTGAGAGGACGTTGCAGACCCTCTGCTGTAG...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTGGAAGAGCAGTCAGTGCTCTTAACTACTGAGACATCTCTCCAGCCCGTGAGTATCAGCTCCTaGCGGATCCTGTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLEEQSVLLTTETSLQPVSISS*RILSAS Trigger: AGAGGCTGACAGGATCCGGCAGGAGCTGATACTCAC...GGGCTGGAGAGATGTCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTGGAAGAGCAGTCAGTGCTCTTAACTACTGAGACATCTCTCCAGCCCCACCCCTATCACCCCTaGCATCCCTGCCAATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TVLEEQSVLLTTETSLQPHPYHP*HPCQSI Trigger: TATGGATTGGCAGGGATGCCAGGGGTGATAGGGGTG...GGGCTGGAGAGATGTCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR TCA 90 bp | AACTCAGGGCCTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCATCATCAGTGCCCCTCTaGTGTCACACACCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGPCTNKDTFCLSEEPSSSVPL*CHTPPG Trigger: GCCTGGTGGTGTGTGACATCAGAGGGGCACTGATGA...TGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAGGCCCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAAAGAACACAAAAAGGCCCAGAGAGTTCTCTCACCAGAGGTCACAGGTCATCAGTGCCCCTCTaGTGTCACACACCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKERTQKGPESSLTRGHRSSVPL*CHTPPG Trigger: GCCTGGTGGTGTGTGACATCAGAGGGGCACTGATGA...CCTGTGACCTCTGGTGAGAGAACTCTCTGGGCCTTTTTGTGTTCTTTCTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTGGAAGAGCAGTCAGTGCTCTTAACTACTGAGACATCTCTCCAGCCCTCCAGGGAAATGTTGTaGAGGACACAGCAAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLEEQSVLLTTETSLQPSREML*RTQQAK Trigger: CTTAGCTTGCTGTGTCCTTCACAACATTTCCCTGGA...GGGCTGGAGAGATGTCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCGTCCTGGAGGCTACCTaGCCAGCTTGTCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLRFSARAKYALNCWTSLVLEAT*PACLHS Trigger: ACTGTGGAGACAAGCTGGCCAGGTAGCCTCCAGGAC...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR CCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCAGCACAGCACAGTCCTaGAGGCTACCTGGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLRFSARAKYALNCWTSLSTAQS*RLPGQL Trigger: AAGCTGGCCAGGTAGCCTCCAGGACTGTGCTGTGCT...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR GCA 90 bp | CTTACAACTAGTGAACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTGAACCACCCCTGGCATCCCTaGCAATCCATAGAATTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTTSELSKEQCTAWGSLNHPWHP*QSIEFV Trigger: GACGAATTCTATGGATTGGCAGGGATGCCAGGGGTG...GTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTTCACTAGTTGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EAEAGELLQAPGQPGLHSQFQTD*LKKTAV Trigger: TACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTG...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | AAACACTGTCTTGATTTTGGTCTAGTTGACACATCTGCCCTTGCACCTGCCCTCAATGGGTCCAGGCACTaGAGAGGACCAAACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KHCLDFGLVDTSALAPALNGSRH*RGPNIH Trigger: ATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATT...GAGGGCAGGTGCAAGGGCAGATGTGTCAACTAGACCAAAATCAAGACAGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGGCCTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAGGCTTCAGTGACATTTaGAACGCAGCGACTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSGPCTNKDTFCLSEEPSGFSDI*NAATHR Trigger: TCTATGAGTCGCTGCGTTGCAAATGTCACTGAAGCC...TGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAGGCCCTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR GCA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCCACCCCTGGCATCCCTaGCAATCCATAGAATTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLRFSARAKYALNCWTSLHPWHP*QSIEFV Trigger: GACGAATTCTATGGATTGGCAGGGATGCCAGGGGTG...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR GCA 90 bp | AAACACTGTCTTGATTTTGGTCTAGTTGACACATCTGCCCTTGCACCTGCCCTCAGGACCAAACATCCATaGCATGGTCCAGGGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KHCLDFGLVDTSALAPALRTKHP*HGPGKC Trigger: ACATTTCCCTGGACCATGGCATGGATGTTTGGTCCT...GAGGGCAGGTGCAAGGGCAGATGTGTCAACTAGACCAAAATCAAGACAGTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | AAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCACACTTGTCCTGGAGGCTACCTaGCCAGCTTGTCTCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTHSVSAKSPQNSVFFTLVLEAT*PACLHS Trigger: ACTGTGGAGACAAGCTGGCCAGGTAGCCTCCAGGAC...AAGTGTGAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR GCA 90 bp | CTTACAACTAGTGAACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTGAACCTGGCTAATTCCAATTaGATCTCCCATCCGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTTSELSKEQCTAWGSLNLANSN*ISHPSL Trigger: CAGACTCGGATGGGAGATGCAATTGGAATTAGCCAG...GTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTTCACTAGTTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCATGTGCCACCACTGCCCAGTGGTGGTATACACTTTTAATTCCAGCACTGGCTAATTCCAATTaGATCTCCCATCCGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKACATTAQWWYTLLIPALANSN*ISHPSL Trigger: CAGACTCGGATGGGAGATGCAATTGGAATTAGCCAG...TGCTGGAATTAAAAGTGTATACCACCACTGGGCAGTGGTGGCACATGCCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR GCA 90 bp | CTTACAACTAGTGAACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTGAACGGCTTCAGTGACATTTaGAACGCAGCGACTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTTSELSKEQCTAWGSLNGFSDI*NAATHR Trigger: TCTATGAGTCGCTGCGTTGCAAATGTCACTGAAGCC...GTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTTCACTAGTTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR GCA 90 bp | CTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCCACCCCTGGCATCCCTaGCAATCCATAGAATTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAQIKTHSVSAKSPQNSVHPWHP*QSIEFV Trigger: GACGAATTCTATGGATTGGCAGGGATGCCAGGGGTG...GACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGCTGGAGTTGTAGGTGTGTACATCACCATTCCACCAGAAGGTTTCAAAGAGGTCTTCCGCATTTaGTGCCTTGATTGCTACATG | + |
|
Preference number: 4 (lower is better) Translates to: PSAGVVGVYITIPPEGFKEVFRI*CLDCYM Trigger: CATGTAGCAATCAAGGCACCAAATGCGGAAGACCTC...TTTGAAACCTTCTGGTGGAATGGTGATGTACACACCTACAACTCCAGCACTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCAGCACAGCACAGTCCTaGAGGCTACCTGGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIKTHSVSAKSPQNSVFFSTAQS*RLPGQL Trigger: AAGCTGGCCAGGTAGCCTCCAGGACTGTGCTGTGCT...GAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCAGGACTCAGGGGCACTaGATTCTCGGACACTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQIKTHSVSAKSPQNSVRTQGH*ILGHCN Trigger: ATTGCAGTGTCCGAGAATCCAGTGCCCCTGAGTCCT...GACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR TCA 90 bp | CTTACAACTAGTGAACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTGAACTCATCAACTGGAAAGTaGATAAACTGTGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTSELSKEQCTAWGSLNSSTGK*INCEAR Trigger: ACGGGCCTCACAGTTTATTCACTTTCCAGTTGATGA...GTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTTCACTAGTTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAAAGAACACAAAAAGGCCCAGAGAGTTCTCTCACCAGAGGTCACAGGTCATCAACTGGAAAGTaGATAAACTGTGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KKERTQKGPESSLTRGHRSSTGK*INCEAR Trigger: ACGGGCCTCACAGTTTATTCACTTTCCAGTTGATGA...CCTGTGACCTCTGGTGAGAGAACTCTCTGGGCCTTTTTGTGTTCTTTCTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR GCA 90 bp | AACTCAGGGCCTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAATTTGGTGCCTTGATTaGTACATGGATACAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGPCTNKDTFCLSEEPSIWCLD*YMDTVS Trigger: GCTGACTGTATCCATGTAGCAATCAAGGCACCAAAT...TGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAGGCCCTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGGGATGGCTCAAATGGAACTTAAAGTGGAGTGTGATGGTGGATACCTGATTTGGTGCCTTGATTaGTACATGGATACAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEGMAQMELKVECDGGYLIWCLD*YMDTVS Trigger: GCTGACTGTATCCATGTAGCAATCAAGGCACCAAAT...CAGGTATCCACCATCACACTCCACTTTAAGTTCCATTTGAGCCATCCCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTACTGTTTCTTTCTTTCAGTTCTAGGGATCAATACATCACACATGCTAGGTCCAGAGACTCCATGTaGTCATCCTCCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLFLSFSSRDQYITHARSRDSM*SSSPSG Trigger: CCCTGAGGGGGAGGATGAGCACATGGAGTCTCTGGA...CCTAGCATGTGTGATGTATTGATCCCTAGAACTGAAAGAAAGAAACAGTAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | CTTACAACTAGTGAACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTGAACGGGGGAATCCATACATaGACATCAAGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTTSELSKEQCTAWGSLNGGIHT*TSSIRQ Trigger: CTGACGAATACTTGATGTCCATGTATGGATTCCCCC...GTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTTCACTAGTTGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGCATGTGCCACCACTGCCCAGTGGTGGTATACACTTTTAATTCCAGCAGGGGGAATCCATACATaGACATCAAGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKACATTAQWWYTLLIPAGGIHT*TSSIRQ Trigger: CTGACGAATACTTGATGTCCATGTATGGATTCCCCC...TGCTGGAATTAAAAGTGTATACCACCACTGGGCAGTGGTGGCACATGCCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR CCA 90 bp | CTTACAACTAGTGAACTTTCCAAAGAACAGTGCACAGCCTGGGGTTCACTGAACGAAGCCAGCTATCTTTaGGCATCCCAGTTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LTTSELSKEQCTAWGSLNEASYL*ASQFQT Trigger: AGTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTC...GTTCAGTGAACCCCAGGCTGTGCACTGTTCTTTGGAAAGTTCACTAGTTGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGCATGTGCCACCACTGCCCAGTGGTGGTATACACTTTTAATTCCAGCAGAAGCCAGCTATCTTTaGGCATCCCAGTTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKACATTAQWWYTLLIPAEASYL*ASQFQT Trigger: AGTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTC...TGCTGGAATTAAAAGTGTATACCACCACTGGGCAGTGGTGGCACATGCCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR TCA 90 bp | CTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCCCGCATTTGGTGCCTTaGTTGCTACATGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQIKTHSVSAKSPQNSVPHLVP*LLHGYS Trigger: ACTGTATCCATGTAGCAATCAAGGCACCAAATGCGG...GACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR TCA 90 bp | AATACATCACACATGCTAGGCAAGTGCTCACTTACTTATATTAGATCATTTCTCTCATCAGTGCCCCTCTaGTGTCACACACCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTSHMLGKCSLTYIRSFLSSVPL*CHTPPG Trigger: GCCTGGTGGTGTGTGACATCAGAGGGGCACTGATGA...GAGAAATGATCTAATATAAGTAAGTGAGCACTTGCCTAGCATGTGTGATGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
||
| CDS-3UTR CCA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTGAGGTCTTCCGCATTTaGTGCCTTGATTGCTACATG | + |
|
Preference number: 4 (lower is better) Translates to: FASAYPVLGLQAYKITLSEVFRI*CLDCYM Trigger: CATGTAGCAATCAAGGCACCAAATGCGGAAGACCTC...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCGGGGGAATCCATACATaGACATCAAGTATTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAQIKTHSVSAKSPQNSVGGIHT*TSSIRQ Trigger: CTGACGAATACTTGATGTCCATGTATGGATTCCCCC...GACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCAGACAAAGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTCACTCTGCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFQTKFLCVALDVLGLTLQFQTD*LKKTAV Trigger: TACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTG...CAGAGTGAGTCCCAGGACATCCAAGGCTACACAGAGAAACTTTGTCTGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
||
| CDS-3UTR TCA 90 bp | AAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCACACTTTCATCAACTGGAAAGTaGATAAACTGTGAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTHSVSAKSPQNSVFFTLSSTGK*INCEAR Trigger: ACGGGCCTCACAGTTTATTCACTTTCCAGTTGATGA...AAGTGTGAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS-3UTR GCA 90 bp | CAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCCTGGCTAATTCCAATTaGATCTCCCATCCGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIKTHSVSAKSPQNSVFFLANSN*ISHPSL Trigger: CAGACTCGGATGGGAGATGCAATTGGAATTAGCCAG...GAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS-3UTR CCA 90 bp | AAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCACACTTGAAGCCAGCTATCTTTaGGCATCCCAGTTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KTHSVSAKSPQNSVFFTLEASYL*ASQFQT Trigger: AGTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTC...AAGTGTGAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS-3UTR TCA 90 bp | ACTGAAACAACAAAACTCTTTGGCTGTATGCTGTTTTCTCCTTCATTGTGTGATCCGCATTTGGTGCCTTaGTTGCTACATGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TETTKLFGCMLFSPSLCDPHLVP*LLHGYS Trigger: ACTGTATCCATGTAGCAATCAAGGCACCAAATGCGG...ATCACACAATGAAGGAGAAAACAGCATACAGCCAAAGAGTTTTGTTGTTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR CCA 90 bp | ACTGAAACAACAAAACTCTTTGGCTGTATGCTGTTTTCTCCTTCATTGTGTGATGAGGTCTTCCGCATTTaGTGCCTTGATTGCTACATG | + |
|
Preference number: 4 (lower is better) Translates to: TETTKLFGCMLFSPSLCDEVFRI*CLDCYM Trigger: CATGTAGCAATCAAGGCACCAAATGCGGAAGACCTC...ATCACACAATGAAGGAGAAAACAGCATACAGCCAAAGAGTTTTGTTGTTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR CCA 90 bp | GTTTTACTGTTTCTTTCTTTCAGTTCTAGGGATCAATACATCACACATGCTAGGCAAGCTAAGATGATGTaGCTGCATTTCTCCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLFLSFSSRDQYITHARQAKMM*LHFSGE Trigger: CTCACCGGAGAAATGCAGCCACATCATCTTAGCTTG...CCTAGCATGTGTGATGTATTGATCCCTAGAACTGAAAGAAAGAAACAGTAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR GCA 90 bp | ACTGAAACAACAAAACTCTTTGGCTGTATGCTGTTTTCTCCTTCATTGTGTGATATTTGGTGCCTTGATTaGTACATGGATACAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TETTKLFGCMLFSPSLCDIWCLD*YMDTVS Trigger: GCTGACTGTATCCATGTAGCAATCAAGGCACCAAAT...ATCACACAATGAAGGAGAAAACAGCATACAGCCAAAGAGTTTTGTTGTTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCTGGATTCTCGGACACTaGAATCATACAACAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIKTHSVSAKSPQNSVFFWILGH*NHTTML Trigger: AAGCATTGTTGTATGATTGCAGTGTCCGAGAATCCA...GAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS-3UTR CCA 90 bp | CAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QIKTHSVSAKSPQNSVFFQFQTD*LKKTAV Trigger: TACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTG...GAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
||
| CDS GCA 90 bp | AGCTCCTGCCGGATCCTGTCAGCCTCTAAGTCCAGAGACTCCATGTaGTCATCCTCCCCCTCAGGGGGCTGGTCAATGGGTCCAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SSCRILSASKSRDSM*SSSPSGGWSMGPGT Trigger: AGTGCCTGGACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCACATGGAGTCTCTGGACTTAGAGGCTGACAGGATCCGGCAGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 90 bp | CCAGAGACTCCATGTGCTCATCCTCCCCCTCAGGGGGCTGGTCAATaGGTCCAGGCACTGGAGAGGACCAAACATCCATGCCATGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PETPCAHPPPQGAGQ*VQALERTKHPCHGP Trigger: TGGACCATGGCATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCACATGGAGTCTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 90 bp | GTGCTCATCCTCCCCCTCAGGGGGCTGGTCAATGGGTCCAGGCACTaGAGAGGACCAAACATCCATGCCATGGTCCAGGGAAATGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLILPLRGLVNGSRH*RGPNIHAMVQGNVV Trigger: CACAACATTTCCCTGGACCATGGCATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR CAA 90 bp | GAGGCTGAAGCAGGAGAACTGTTACAAGCTCCAGGCCAACCTGGGCTACACAGTTACTGCAGTGCCCCTTaGGATCCGTCCAGGCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: EAEAGELLQAPGQPGLHSYCSAP*DPSRHR Trigger: CCGGTGCCTGGACGGATCCAAAGGGGCACTGCAGTA...ACTGTGTAGCCCAGGTTGGCCTGGAGCTTGTAACAGTTCTCCTGCTTCAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 90 bp | TCTAAGTCCAGAGACTCCATGTGCTCATCCTCCCCCTCAGGGGGCTaGTCAATGGGTCCAGGCACTGGAGAGGACCAAACATCCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKSRDSMCSSSPSGG*SMGPGTGEDQTSMP Trigger: TGGCATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCACATGGAGTCTCTGGACTTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS GCA 90 bp | GGGGCTGGTCAATGGGTCCAGGCACTGGAGAGGACCAAACATCCATaGCATGGTCCAGGGAAATGTTGTGAAGGACACAGCAAGCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGQWVQALERTKHP*HGPGKCCEGHSKLR Trigger: TCTTAGCTTGCTGTGTCCTTCACAACATTTCCCTGGACCATGGCATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATTGACCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS TCA 90 bp | GACCCTTTCGGTTCACGTAAGAGAGGTCTTCCGCATTTGGTGCCTTaGTTGCTACATGGATACAGTCAGCCACCCCTATCACCCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DPFGSRKRGLPHLVP*LLHGYSQPPLSPLA Trigger: TGCCAGGGGTGATAGGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTGAACCGAAAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS GCA 90 bp | CTTTCGGTTCACGTAAGAGAGGTCTTCCGCATTTGGTGCCTTGATTaGTACATGGATACAGTCAGCCACCCCTATCACCCCTGGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSVHVREVFRIWCLD*YMDTVSHPYHPWHP Trigger: GGGATGCCAGGGGTGATAGGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTGAACCGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS TCA 90 bp | AATGCTGCCAGGATCTGTGTCTCAGGGCTAATAGCCCTAGATCTCTaGGTAGGCCGAGAAAGGCTTGCCCCCAAGAGTTCCACTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NAARICVSGLIALDL*VGRERLAPKSSTKK Trigger: CTTCTTAGTGGAACTCTTGGGGGCAAGCCTTTCTCGGCCTACTCAGAGATCTAGGGCTATTAGCCCTGAGACACAGATCCTGGCAGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS TCA 90 bp | TGCCATGGTCCAGGGAAATGTTGTGAAGGACACAGCAAGCTAAGATaGTGTGGCTGCATTTCTCCGGTGAGTACTGCAGTGCCCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CHGPGKCCEGHSKLR*CGCISPVSTAVPLW Trigger: CCAAAGGGGCACTGCAGTACTCACCGGAGAAATGCAGCCACATCATCTTAGCTTGCTGTGTCCTTCACAACATTTCCCTGGACCATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS GCA 90 bp | ATGCAGACCCTTTCGGTTCACGTAAGAGAGGTCTTCCGCATTTGGTaGCTTGATTGCTACATGGATACAGTCAGCCACCCCTATCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: MQTLSVHVREVFRIW*LDCYMDTVSHPYHP Trigger: GGGGTGATAGGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTGAACCGAAAGGGTCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS GCA 90 bp | CCTACAGCAGAGGGTCTGCAACGTCCTCTCAATCACACTGTGAGTTaGAGAATGAGCCCTATTGTAGCGATACTCCGCTGCAGTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTAEGLQRPLNHTVS*RMSPIVAILRCSFR Trigger: CCTGAAACTGCAGCGGAGTATCGCTACAATAGGGCTCATTCTGCAACTCACAGTGTGATTGAGAGGACGTTGCAGACCCTCTGCTGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 90 bp | ACAAGGGCTTCAGTGACATTTGCAACGCAGCGACTCATAGAGGCCTaGCTAATTCCAATTGCATCTCCCATCCGAGTCTGGAAGGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRASVTFATQRLIEA*LIPIASPIRVWKDP Trigger: AGGGTCCTTCCAGACTCGGATGGGAGATGCAATTGGAATTAGCCAGGCCTCTATGAGTCGCTGCGTTGCAAATGTCACTGAAGCCCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS GCA 90 bp | GGACTCAGGGGCACTGGATTCTCGGACACTGCAATCATACAACAATaGTTGTGTAGCACAACCAAGAAGCCAGCTATCTTTGGGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRGTGFSDTAIIQQ*LCSTTKKPAIFGHP Trigger: GGGATGCCCAAAGATAGCTGGCTTCTTGGTTGTGCTACACAAGCATTGTTGTATGATTGCAGTGTCCGAGAATCCAGTGCCCCTGAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS CCA 90 bp | CACCAAGAAGCCAGCTATCTTTGGGCATCCCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTAGCACAGCACAGTCCTGGAGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: HQEASYLWASQFQTD*LKKTAVAQHSPGGY Trigger: GTAGCCTCCAGGACTGTGCTGTGCTACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTCTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS TCA 90 bp | ACTGGAGAGGACCAAACATCCATGCCATGGTCCAGGGAAATGTTGTaGAGGACACAGCAAGCTAAGATGATGTGGCTGCATTTCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGEDQTSMPWSREML*RTQQAKMMWLHFSG Trigger: ACCGGAGAAATGCAGCCACATCATCTTAGCTTGCTGTGTCCTTCACAACATTTCCCTGGACCATGGCATGGATGTTTGGTCCTCTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 90 bp | AGAATGCAGACCCTTTCGGTTCACGTAAGAGAGGTCTTCCGCATTTaGTGCCTTGATTGCTACATGGATACAGTCAGCCACCCCTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RMQTLSVHVREVFRI*CLDCYMDTVSHPYH Trigger: GTGATAGGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTGAACCGAAAGGGTCTGCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS CCA 90 bp | AACCAAGAAGCCAGCTATCTTTGGGCATCCCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTAGCACAGCACAGTCCTGGAGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NQEASYLWASQFQTD*LKKTAVAQHSPGGY Trigger: GTAGCCTCCAGGACTGTGCTGTGCTACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTCTTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS CCA 90 bp | TACCAAGAAGCCAGCTATCTTTGGGCATCCCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTAGCACAGCACAGTCCTGGAGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: YQEASYLWASQFQTD*LKKTAVAQHSPGGY Trigger: GTAGCCTCCAGGACTGTGCTGTGCTACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTCTTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| CDS-3UTR CAA 90 bp | CTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCGGCTACCTGGCCAGCTaGTCTCCACAGTCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAQIKTHSVSAKSPQNSVGYLAS*SPQSSV Trigger: CACTGATGACTGTGGAGACAAGCTGGCCAGGTAGCC...GACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS TCA 90 bp | TATTCGTCAGTCACATCATCCAGCTTAAAACGGTCCAAGGTCCGGTaGCCTCGGCCATACAGCAAGAGATCACAGTCAAGCACTGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: YSSVTSSSLKRSKVR*PRPYSKRSQSSTVI Trigger: AATAACAGTGCTTGACTGTGATCTCTTGCTGTATGGCCGAGGTCACCGGACCTTGGACCGTTTTAAGCTGGATGATGTGACTGACGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000128140.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS-3UTR CAA 90 bp | AACTCAGGGCCTTGCACAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCATCCGCATTTGGTGCCTaGATTGCTACATGGATACAG | + |
|
Preference number: 5 (lower is better) Translates to: NSGPCTNKDTFCLSEEPSSAFGA*IATWIQ Trigger: CTGTATCCATGTAGCAATCAAGGCACCAAATGCGGA...TGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTGTGCAAGGCCCTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS TCA 90 bp | AATTCGTCCTTTAGAGACTGTACGGCAGCTTCATCAACTGGAAAGTaGATAAACTGTGAGGCCCGTTCCACAAGGGCTTCAGTGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: NSSFRDCTAASSTGK*INCEARSTRASVTF Trigger: AAATGTCACTGAAGCCCTTGTGGAACGGGCCTCACAGTTTATTCACTTTCCAGTTGATGAAGCTGCCGTACAGTCTCTAAAGGACGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS-3UTR CAA 90 bp | AACCTCAGGTTCTCTGCAAGAGCCAAATATGCTCTTAACTGTTGGACATCTCTCAGAAGCCAGCTATCTTaGGGCATCCCAGTTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NLRFSARAKYALNCWTSLRSQLS*GIPVSN Trigger: GTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTCT...GAGAGATGTCCAACAGTTAAGAGCATATTTGGCTCTTGCAGAGAACCTGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCTCAGCCTACCCTGTCTTGGGATTACAAGCGTATAAAATAACACTCAGTTCCGCATTTGGTGCCTaGATTGCTACATGGATACAG | + |
|
Preference number: 5 (lower is better) Translates to: FASAYPVLGLQAYKITLSSAFGA*IATWIQ Trigger: CTGTATCCATGTAGCAATCAAGGCACCAAATGCGGA...ACTGAGTGTTATTTTATACGCTTGTAATCCCAAGACAGGGTAGGCTGAGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| CDS-3UTR CAA 90 bp | AATACATCACACATGCTAGGCAAGTGCTCACTTACTTATATTAGATCATTTCTCGGCTACCTGGCCAGCTaGTCTCCACAGTCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTSHMLGKCSLTYIRSFLGYLAS*SPQSSV Trigger: CACTGATGACTGTGGAGACAAGCTGGCCAGGTAGCC...GAGAAATGATCTAATATAAGTAAGTGAGCACTTGCCTAGCATGTGTGATGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR CAA 90 bp | CAAATAAAGACACATTCTGTCTCAGCGAAGAGCCCTCAAAATTCTGTCTTTTTCAGAAGCCAGCTATCTTaGGGCATCCCAGTTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QIKTHSVSAKSPQNSVFFRSQLS*GIPVSN Trigger: GTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTCT...GAAAAAGACAGAATTTTGAGGGCTCTTCGCTGAGACAGAATGTGTCTTTATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS-3UTR CAA 90 bp | GTTTTACTGTTTCTTTCTTTCAGTTCTAGGGATCAATACATCACACATGCTAGGTCCGCATTTGGTGCCTaGATTGCTACATGGATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLFLSFSSRDQYITHARSAFGA*IATWIQ Trigger: CTGTATCCATGTAGCAATCAAGGCACCAAATGCGGA...CCTAGCATGTGTGATGTATTGATCCCTAGAACTGAAAGAAAGAAACAGTAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS-3UTR CAA 90 bp | ACTGAAACAACAAAACTCTTTGGCTGTATGCTGTTTTCTCCTTCATTGTGTGATAGAAGCCAGCTATCTTaGGGCATCCCAGTTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TETTKLFGCMLFSPSLCDRSQLS*GIPVSN Trigger: GTTTGAAACTGGGATGCCCAAAGATAGCTGGCTTCT...ATCACACAATGAAGGAGAAAACAGCATACAGCCAAAGAGTTTTGTTGTTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS TCA 90 bp | CAGATTTCACCCACTCTCCTGCATAACTTTTCTATGGACATAAACTaGAAATTTATACTTGCAAACTTACCAAGAAGCCAGCTATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QISPTLLHNFSMDIN*KFILANLPRSQLSL Trigger: CAAAGATAGCTGGCTTCTTGGTAAGTTTGCAAGTATAAATTTTCAGTTTATGTCCATAGAAAAGTTATGCAGGAGAGTGGGTGAAATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142692.2 |
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| CDS CCA 72 bp | CCATGTGCTCATCCTCCCCCTCAGGGGGCTGGTCAATaGGTCCAGGCACTGGAGAGGACCAAACATCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: PCAHPPPQGAGQ*VQALERTKHPC Trigger: GCATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCACATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS GCA 72 bp | CGGATCCTGTCAGCCTCTAAGTCCAGAGACTCCATGTaGTCATCCTCCCCCTCAGGGGGCTGGTCAATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RILSASKSRDSM*SSSPSGGWSMG Trigger: ACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCACATGGAGTCTCTGGACTTAGAGGCTGACAGGATCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 72 bp | AGAGACTCCATGTGCTCATCCTCCCCCTCAGGGGGCTaGTCAATGGGTCCAGGCACTGGAGAGGACCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RDSMCSSSPSGG*SMGPGTGEDQT Trigger: TGTTTGGTCCTCTCCAGTGCCTGGACCCATTGACCAGCCCCCTGAGGGGGAGGATGAGCACATGGAGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CAA 72 bp | TGGCTGCATTTCTCCGGTGAGTACTGCAGTGCCCCTTaGGATCCGTCCAGGCACCGGAACCTACAGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WLHFSGEYCSAP*DPSRHRNLQQR Trigger: CCTCTGCTGTAGGTTCCGGTGCCTGGACGGATCCAAAGGGGCACTGCAGTACTCACCGGAGAAATGCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CAA 90 bp | AAGATGATGTGGCTGCATTTCTCCGGTGAGTACTGCAGTGCCCCTTaGGATCCGTCCAGGCACCGGAACCTACAGCAGAGGGTCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KMMWLHFSGEYCSAP*DPSRHRNLQQRVCN Trigger: GTTGCAGACCCTCTGCTGTAGGTTCCGGTGCCTGGACGGATCCAAAGGGGCACTGCAGTACTCACCGGAGAAATGCAGCCACATCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS GCA 72 bp | GCTAAGATGATGTGGCTGCATTTCTCCGGTGAGTACTaGAGTGCCCCTTTGGATCCGTCCAGGCACCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AKMMWLHFSGEY*SAPLDPSRHRN Trigger: GTTCCGGTGCCTGGACGGATCCAAAGGGGCACTGCAGTACTCACCGGAGAAATGCAGCCACATCATCTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS TCA 72 bp | AGGATCTGTGTCTCAGGGCTAATAGCCCTAGATCTCTaGGTAGGCCGAGAAAGGCTTGCCCCCAAGAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RICVSGLIALDL*VGRERLAPKSS Trigger: GGAACTCTTGGGGGCAAGCCTTTCTCGGCCTACTCAGAGATCTAGGGCTATTAGCCCTGAGACACAGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS GCA 72 bp | CAATGGGTCCAGGCACTGGAGAGGACCAAACATCCATaGCATGGTCCAGGGAAATGTTGTGAAGGACACAGC | + |
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Preference number: 6 (lower is better) Translates to: QWVQALERTKHP*HGPGKCCEGHS Trigger: GCTGTGTCCTTCACAACATTTCCCTGGACCATGGCATGGATGTTTGGTCCTCTCCAGTGCCTGGACCCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CCA 72 bp | GAGAGGTCTTCCGCATTTGGTGCCTTGATTGCTACATaGATACAGTCAGCCACCCCTATCACCCCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: ERSSAFGALIAT*IQSATPITPGI Trigger: GATGCCAGGGGTGATAGGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS TCA 72 bp | GTCACATCATCCAGCTTAAAACGGTCCAAGGTCCGGTaGCCTCGGCCATACAGCAAGAGATCACAGTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VTSSSLKRSKVR*PRPYSKRSQSS Trigger: GCTTGACTGTGATCTCTTGCTGTATGGCCGAGGTCACCGGACCTTGGACCGTTTTAAGCTGGATGATGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000128140.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS GCA 72 bp | CACGTAAGAGAGGTCTTCCGCATTTGGTGCCTTGATTaGTACATGGATACAGTCAGCCACCCCTATCACCCC | + |
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Preference number: 6 (lower is better) Translates to: HVREVFRIWCLD*YMDTVSHPYHP Trigger: GGGGTGATAGGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS GCA 72 bp | GAGGGTCTGCAACGTCCTCTCAATCACACTGTGAGTTaGAGAATGAGCCCTATTGTAGCGATACTCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: EGLQRPLNHTVS*RMSPIVAILRC Trigger: GCAGCGGAGTATCGCTACAATAGGGCTCATTCTGCAACTCACAGTGTGATTGAGAGGACGTTGCAGACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CAA 90 bp | ACCTACAGCAGAGGGTCTGCAACGTCCTCTCAATCACACTGTGAGTaGCAGAATGAGCCCTATTGTAGCGATACTCCGCTGCAGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TYSRGSATSSQSHCE*QNEPYCSDTPLQFQ Trigger: CTGAAACTGCAGCGGAGTATCGCTACAATAGGGCTCATTCTGCAACTCACAGTGTGATTGAGAGGACGTTGCAGACCCTCTGCTGTAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS GCA 72 bp | CTTTCGGTTCACGTAAGAGAGGTCTTCCGCATTTGGTaGCTTGATTGCTACATGGATACAGTCAGCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: LSVHVREVFRIW*LDCYMDTVSHP Trigger: GGGGTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTGAACCGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS CAA 72 bp | AGAGGGTCTGCAACGTCCTCTCAATCACACTGTGAGTaGCAGAATGAGCCCTATTGTAGCGATACTCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGSATSSQSHCE*QNEPYCSDTPL Trigger: CAGCGGAGTATCGCTACAATAGGGCTCATTCTGCAACTCACAGTGTGATTGAGAGGACGTTGCAGACCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS CAA 90 bp | CTCAGGGGCACTGGATTCTCGGACACTGCAATCATACAACAATGCTaGTGTAGCACAACCAAGAAGCCAGCTATCTTTGGGCATCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LRGTGFSDTAIIQQC*CSTTKKPAIFGHPS Trigger: ACTGGGATGCCCAAAGATAGCTGGCTTCTTGGTTGTGCTACACAAGCATTGTTGTATGATTGCAGTGTCCGAGAATCCAGTGCCCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111322.2 |
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| CDS CCA 72 bp | ACCCTTTCGGTTCACGTAAGAGAGGTCTTCCGCATTTaGTGCCTTGATTGCTACATGGATACAGTCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TLSVHVREVFRI*CLDCYMDTVSH Trigger: GTGGCTGACTGTATCCATGTAGCAATCAAGGCACCAAATGCGGAAGACCTCTCTTACGTGAACCGAAAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS CCA 72 bp | GCCAGCTATCTTTGGGCATCCCAGTTTCAAACTGACTaGTTAAAGAAGACCGCTGTAGCACAGCACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ASYLWASQFQTD*LKKTAVAQHSP Trigger: AGGACTGTGCTGTGCTACAGCGGTCTTCTTTAACCAGTCAGTTTGAAACTGGGATGCCCAAAGATAGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000142692.2 |
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| CDS TCA 72 bp | GACCAAACATCCATGCCATGGTCCAGGGAAATGTTGTaGAGGACACAGCAAGCTAAGATGATGTGGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: DQTSMPWSREML*RTQQAKMMWLH Trigger: ATGCAGCCACATCATCTTAGCTTGCTGTGTCCTTCACAACATTTCCCTGGACCATGGCATGGATGTTTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090608.6 |
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| CDS TCA 72 bp | TTTAGAGACTGTACGGCAGCTTCATCAACTGGAAAGTaGATAAACTGTGAGGCCCGTTCCACAAGGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FRDCTAASSTGK*INCEARSTRAS Trigger: TGAAGCCCTTGTGGAACGGGCCTCACAGTTTATTCACTTTCCAGTTGATGAAGCTGCCGTACAGTCTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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| CDS TCA 72 bp | AAAGGCTTGCCCCCAAGAGTTCCACTAAGAAGTATATaGATTGTCGGGGGAATCCATACATGGACATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KGLPPRVPLRSI*IVGGIHTWTSS Trigger: ACTTGATGTCCATGTATGGATTCCCCCGACAATTCATATACTTCTTAGTGGAACTCTTGGGGGCAAGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000090608.6 ENSMUST00000111322.2 ENSMUST00000140183.2 ENSMUST00000142692.2 |
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