Pregenerated sensors for HAPLN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007594Ensembl transcript IDs: ENSMUST00000007738.11
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCACCGCAGGGGTGTGTCATATGTCCAAGGAATCTCTGAGACTCTaGGACGTGATCGGTATCCAGGGGGTGCATGAGGCCACTGGATCA | + |
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Preference number: 1 (lower is better) Translates to: CTAGVCHMSKESLRL*DVIGIQGVHEATGS Trigger: TGATCCAGTGGCCTCATGCACCCCCTGGATACCGATCACGTCTCAGAGTCTCAGAGATTCCTTGGACATATGACACACCCCTGCGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | GGTGCAGATAGCTGTTCCAGAAGCAGAGTCCTGCATAGGCCCATCTaGAGAAGGGACATTTGTCAGGCGCCTGAGGAACACAGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GADSCSRSRVLHRPI*RRDICQAPEEHSRQ Trigger: CTGCCTGCTGTGTTCCTCAGGCGCCTGACAAATGTCCCTTCTTCAGATGGGCCTATGCAGGACTCTGCTTCTGGAACAGCTATCTGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | CAGGTCAGTTGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTaGACAGGATGGGACCCTGGAGGGGAAAGCCTTGAAGGGACAGGT | + |
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Preference number: 1 (lower is better) Translates to: QVSCHGDTDVLYGNS*TGWDPGGESLEGTG Trigger: ACCTGTCCCTTCAAGGCTTTCCCCTCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | CACAGCAGGCAGCTCCAGTCAGAGGGACCCATAGCAAGAAGTTCCTaGGTGCTGCAGGTCAGTTGTCATGGAGACACCGACGTTCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: HSRQLQSEGPIARSS*VLQVSCHGDTDVLY Trigger: ATAGAGAACGTCGGTGTCTCCATGACAACTGACCTGCAGCACTCAGGAACTTCTTGCTATGGGTCCCTCTGACTGGAGCTGCCTGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR GCA 90 bp | AAACTGTCTAGGAGCGGGGCTTGGGCAACTGAGAGAAACAGAAGATaGTCTTTGGGAAAGGGGCAGCTGTTTCCATGGAGAGGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: KLSRSGAWATERNRR*SLGKGQLFPWRGLE Trigger: CTCCAGGCCTCTCCATGGAAACAGCTGCCCCTTTCCCAAAGAGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAGACAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR GCA 90 bp | GCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAGTAAAGTTAGCATaGAAATGGATGGTGCAGATAGCTGTTCCAGAAGCAGAGTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: AVVAPAQLLGGVKLA*KWMVQIAVPEAESC Trigger: GCAGGACTCTGCTTCTGGAACAGCTATCTGCACCATCCATTTGCATGCTAACTTTACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | CTAGGAGCGGGGCTTGGGCAACTGAGAGAAACAGAAGATGCTCTTTaGGAAAGGGGCAGCTGTTTCCATGGAGAGGCCTGGAGAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: LGAGLGQLRETEDAL*ERGSCFHGEAWRTE Trigger: TTCAGTTCTCCAGGCCTCTCCATGGAAACAGCTGCCCCTTTCCCAAAGAGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | GCTGTTTCCATGGAGAGGCCTGGAGAACTGAATGTTGGGTTACCCTaGGGATACTCAGTGGGGAAGATTGTCTCCACAGCAGTCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: AVSMERPGELNVGLP*GYSVGKIVSTAVHQ Trigger: CTGGTGGACTGCTGTGGAGACAATCTTCCCCACTGAGTATCCTCAGGGTAACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR GCA 90 bp | GCATGCAAATGGATGGTGCAGATAGCTGTTCCAGAAGCAGAGTCCTaGATAGGCCCATCTGAAGAAGGGACATTTGTCAGGCGCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: ACKWMVQIAVPEAES*IGPSEEGTFVRRLR Trigger: CCTCAGGCGCCTGACAAATGTCCCTTCTTCAGATGGGCCTATGCAGGACTCTGCTTCTGGAACAGCTATCTGCACCATCCATTTGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | GAAAGGGGCAGCTGTTTCCATGGAGAGGCCTGGAGAACTGAATGTTaGGTTACCCTGAGGATACTCAGTGGGGAAGATTGTCTCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: ERGSCFHGEAWRTEC*VTLRILSGEDCLHS Trigger: GCTGTGGAGACAATCTTCCCCACTGAGTATCCTCAGGGTAACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAAACAGCTGCCCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | CCATGGCAACAGTCTGGGTGTTTCAAACTGTCTAGGAGCGGGGCTTaGGCAACTGAGAGAAACAGAAGATGCTCTTTGGGAAAGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: PWQQSGCFKLSRSGA*ATERNRRCSLGKGQ Trigger: CTGCCCCTTTCCCAAAGAGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAGACAGTTTGAAACACCCAGACTGTTGCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | GGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTTGGACTCCATaGCAACAGTCTGGGTGTTTCAAACTGTCTAGGAGCGGGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: GTGILLPWTPEVWTP*QQSGCFKLSRSGAW Trigger: CCAAGCCCCGCTCCTAGACAGTTTGAAACACCCAGACTGTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | GACCCTGGAGGGGAAAGCCTTGAAGGGACAGGTATTCTGTTACCTTaGACACCAGAGGTTTGGACTCCATGGCAACAGTCTGGGTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: DPGGESLEGTGILLP*TPEVWTPWQQSGCF Trigger: GAAACACCCAGACTGTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCCTTCAAGGCTTTCCCCTCCAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | GGGACCCATAGCAAGAAGTTCCTGAGTGCTGCAGGTCAGTTGTCATaGAGACACCGACGTTCTCTATGGCAACAGTTGGACAGGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: GTHSKKFLSAAGQLS*RHRRSLWQQLDRMG Trigger: TCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTGCAGCACTCAGGAACTTCTTGCTATGGGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | GTGGCTCCTGCTCAGCTGCTGGGTGGAGTAAAGTTAGCATGCAAATaGATGGTGCAGATAGCTGTTCCAGAAGCAGAGTCCTGCATAGGC | + |
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Preference number: 1 (lower is better) Translates to: VAPAQLLGGVKLACK*MVQIAVPEAESCIG Trigger: GCCTATGCAGGACTCTGCTTCTGGAACAGCTATCTGCACCATCCATTTGCATGCTAACTTTACTCCACCCAGCAGCTGAGCAGGAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | GAAGATGCTCTTTGGGAAAGGGGCAGCTGTTTCCATGGAGAGGCCTaGAGAACTGAATGTTGGGTTACCCTGAGGATACTCAGTGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: EDALWERGSCFHGEA*RTECWVTLRILSGE Trigger: TTCCCCACTGAGTATCCTCAGGGTAACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAAACAGCTGCCCCTTTCCCAAAGAGCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | TGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTGGACAGGATaGGACCCTGGAGGGGAAAGCCTTGAAGGGACAGGTATTCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: CHGDTDVLYGNSWTG*DPGGESLEGTGILL Trigger: TAACAGAATACCTGTCCCTTCAAGGCTTTCCCCTCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | TCTTTGGGAAAGGGGCAGCTGTTTCCATGGAGAGGCCTGGAGAACTaGATGTTGGGTTACCCTGAGGATACTCAGTGGGGAAGATTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SLGKGQLFPWRGLEN*MLGYPEDTQWGRLS Trigger: AGACAATCTTCCCCACTGAGTATCCTCAGGGTAACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAAACAGCTGCCCCTTTCCCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | CATCTGAGACCTGGAGGCTCCTGCATTTGGGCTGGTCTTGACCCTTaGGCACACATGGGTCCTCAGAAATGGGTTGAAATTGATGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: HLRPGGSCIWAGLDP*AHMGPQKWVEIDGF Trigger: GAAACCATCAATTTCAACCCATTTCTGAGGACCCATGTGTGCTCAAGGGTCAAGACCAGCCCAAATGCAGGAGCCTCCAGGTCTCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 90 bp | AGCCTTGAAGGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTTaGACTCCATGGCAACAGTCTGGGTGTTTCAAACTGTCTAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: SLEGTGILLPWTPEV*TPWQQSGCFKLSRS Trigger: GCTCCTAGACAGTTTGAAACACCCAGACTGTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCCTTCAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | TGTGGTTTTCTGTTTCTTCACCAGGTGATGGAGTCAGTGTACAGCTaGCGATCCAAGACCAGTTTTCCAGCTCCCGGGAAATACAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: CGFLFLHQVMESVYS*RSKTSFPAPGKYRR Trigger: CCTTCTGTATTTCCCGGGAGCTGGAAAACTGGTCTTGGATCGTCAGCTGTACACTGACTCCATCACCTGGTGAAGAAACAGAAAACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR TCA 90 bp | AGAAATGGGTTGAAATTGATGGTTTCAGGGAGAATCTGCCCTCCTTaGTTTCCAAGAAGGAAAGGTCGGCCTTTGTGCGGTACCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: RNGLKLMVSGRICPP*FPRRKGRPLCGTTA Trigger: GGCTGTGGTACCGCACAAAGGCCGACCTTTCCTTCTTGGAAATCAAGGAGGGCAGATTCTCCCTGAAACCATCAATTTCAACCCATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR GCA 90 bp | GAAAACGTAAAGAGACTCTCTGAAAGAGTGGGAATCTGGGTCACTTaGTCGTACAGGGCACGATCATCTTGTGACCTGTGGTTTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: ENVKRLSERVGIWVT*SYRARSSCDLWFSV Trigger: AACAGAAAACCACAGGTCACAAGATGATCGTGCCCTGTACGAGCAAGTGACCCAGATTCCCACTCTTTCAGAGAGTCTCTTTACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CCA 90 bp | AAAATGCTGGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAGTAAACAGTTGGACAGGATaGGACCCTGGAGGGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KMLEGVAVVAPAQLLGGVNSWTG*DPGGES Trigger: GCTTTCCCCTCCAGGGTCCCATCCTGTCCAACTGTT...TACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGCATTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAGTAAAGTTCTCTATGGCAACAGTTaGACAGGATGGGACCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: AGGGCSGGSCSAAGWSKVLYGNS*TGWDPG Trigger: TCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAG...AACTTTACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTATGCACACATGCCCCAGGGCACATGAGGAGGTCAGAGAGGATCCCACATGGGCTGCAGGCTGCTaGTGGGGACCTCAGAACAAT | + |
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Preference number: 2 (lower is better) Translates to: MCMHTCPRAHEEVREDPTWAAGC*WGPQNN Trigger: ATTGTTCTGAGGTCCCCAGCAGCAGCCTGCAGCCCA...TGTGGGATCCTCTCTGACCTCCTCATGTGCCCTGGGGCATGTGTGCATACACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGCCACTTTTGAACCGAGAAGCCCACTGCACTGACAGGGACTGGCAGCCTGAGGTTTGGACTCCATaGCAACAGTCTGGGTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: EEPLLNREAHCTDRDWQPEVWTP*QQSGCF Trigger: GAAACACCCAGACTGTTGCCATGGAGTCCAAACCTC...AGGCTGCCAGTCCCTGTCAGTGCAGTGGGCTTCTCGGTTCAAAAGTGGCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CAA 90 bp | GTCAGAGGGACCCATAGCAAGAAGTTCCTGAGTGCTGCAGGTCAGTaGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: VRGTHSKKFLSAAGQ*SWRHRRSLWQQLDR Trigger: CCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTGCAGCACTCAGGAACTTCTTGCTATGGGTCCCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGAACAATCCTAGCCCAGAGAAGAGTCTGGATAAGTGTTTGGCTGCACACGAGGAGACTCTCCTGTaGCACCAGAGGTGTTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PQNNPSPEKSLDKCLAAHEETLL*HQRCWV Trigger: GACCCAACACCTCTGGTGTCACAGGAGAGTCTCCTC...GTGTGCAGCCAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTTGGACTCCATGGCAACGTTCCAGGAGCCAGCTaGGGAGACTCTCCTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: KGQVFCYLGHQRFGLHGNVPGAS*GDSPVT Trigger: TGTCACAGGAGAGTCTCCTCAGCTGGCTCCTGGAAC...GTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTATGCACACATGCCCCAGGGCACATGAGGAGGTCAGAGAGGATCCCACAGGATTAGGGAGAGTATaGCTCTTCTGGGCAAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: MCMHTCPRAHEEVREDPTGLGRV*LFWAKS Trigger: AGACTTTGCCCAGAAGAGTCATACTCTCCCTAATCC...TGTGGGATCCTCTCTGACCTCCTCATGTGCCCTGGGGCATGTGTGCATACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTATGCACACATGCCCCAGGGCACATGAGGAGGTCAGAGAGGATCCCACAGAGAGAAACAGAAGATaGTCTTTGGGAAAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MCMHTCPRAHEEVREDPTERNRR*SLGKGQ Trigger: CTGCCCCTTTCCCAAAGAGCATCTTCTGTTTCTCTC...TGTGGGATCCTCTCTGACCTCCTCATGTGCCCTGGGGCATGTGTGCATACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTATGCACACATGCCCCAGGGCACATGAGGAGGTCAGAGAGGATCCCACAACAGAAGATGCTCTTTaGGAAAGGGGCAGCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: MCMHTCPRAHEEVREDPTTEDAL*ERGSCF Trigger: GAAACAGCTGCCCCTTTCCCAAAGAGCATCTTCTGT...TGTGGGATCCTCTCTGACCTCCTCATGTGCCCTGGGGCATGTGTGCATACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CAA 90 bp | GGACCTCAGAACAATCCTAGCCCAGAGAAGAGTCTGGATAAGTGTTaGGCTGCACACTTTAGAACAAAAGGTGTGACTGGAGCCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GPQNNPSPEKSLDKC*AAHFRTKGVTGAHS Trigger: GCTGTGGGCTCCAGTCACACCTTTTGTTCTAAAGTGTGCAGCCAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTTCTGAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR TCA 90 bp | GGAAGATTGTCTCCACAGCAGTCCACCAGGGCAGGGACAGACAAAAATGAAGTGGGCACGATCATCTTGTaGCCTGTGGTTTTCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: GRLSPQQSTRAGTDKNEVGTIIL*PVVFCF Trigger: GAAACAGAAAACCACAGGTCACAAGATGATCGTGCC...CACTTCATTTTTGTCTGTCCCTGCCCTGGTGGACTGCTGTGGAGACAATCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CAA 90 bp | CAGAAATGGGTTGAAATTGATGGTTTCAGGGAGAATCTGCCCTCCTaGATTTCCAAGAAGGAAAGGTCGGCCTTTGTGCGGTACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: QKWVEIDGFRENLPS*ISKKERSAFVRYHS Trigger: GCTGTGGTACCGCACAAAGGCCGACCTTTCCTTCTTGGAAATCAAGGAGGGCAGATTCTCCCTGAAACCATCAATTTCAACCCATTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTTGGACTCCATGGCAACTGTTTCTTCACCAGGTaGTGGAGTCAGTGTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: KGQVFCYLGHQRFGLHGNCFFTR*WSQCTA Trigger: AGCTGTACACTGACTCCATCACCTGGTGAAGAAACA...GTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTTGGACTCCATGGCAACTTCCATGGAGAGGCCTaGAGAACTGAATGTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: KGQVFCYLGHQRFGLHGNFHGEA*RTECWV Trigger: AACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAA...GTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGAACAATCCTAGCCCAGAGAAGAGTCTGGATAAGTGTTTGGCTGCACACATGGGTCCTCAGAAATaGGTTGAAATTGATGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PQNNPSPEKSLDKCLAAHMGPQK*VEIDGF Trigger: GAAACCATCAATTTCAACCCATTTCTGAGGACCCAT...GTGTGCAGCCAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTTCTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 72 bp | GGGCAGGCAGGAAAGTGTGTGGGCAAGGGTACTTGCTaGTTCCAGCAGCATCTGAGACCTGGAGGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GQAGKCVGKGTC*FQQHLRPGGSC Trigger: GCAGGAGCCTCCAGGTCTCAGATGCTGCTGGAACCAGCAAGTACCCTTGCCCACACACTTTCCTGCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR GCA 72 bp | ATGGGGCAGGCAGGAAAGTGTGTGGGCAAGGGTACTTaGTGGTTCCAGCAGCATCTGAGACCTGGAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: MGQAGKCVGKGT*WFQQHLRPGGS Trigger: GGAGCCTCCAGGTCTCAGATGCTGCTGGAACCAGCAAGTACCCTTGCCCACACACTTTCCTGCCTGCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 72 bp | AGCCCGGGGACGGGACATTCAAGCGAGTCTACTCTCTaGTCAGAGGAAAACCTGAGGGATAGGCATGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: SPGTGHSSESTL*SEENLRDRHGR Trigger: GCGGCCATGCCTATCCCTCAGGTTTTCCTCTGACCAGAGAGTAGACTCGCTTGAATGTCCCGTCCCCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CAA 90 bp | GCTGGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAGTAAAGTTCCTGGTAAGGCTGCATaGGTGGCCTATGTGACCTTA | + |
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Preference number: 3 (lower is better) Translates to: AGGGCSGGSCSAAGWSKVPGKAA*VAYVTL Trigger: TAAGGTCACATAGGCCACCAATGCAGCCTTACCAGG...AACTTTACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGCCACTTTTGAACCGAGAAGCCCACTGCACTGACAGGGACTGGCAGCCTTGTGGGCAAGGGTACTaGCTGGTTCCAGCAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: EEPLLNREAHCTDRDWQPCGQGY*LVPAAS Trigger: AGATGCTGCTGGAACCAGCAAGTACCCTTGCCCACA...AGGCTGCCAGTCCCTGTCAGTGCAGTGGGCTTCTCGGTTCAAAAGTGGCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 72 bp | GACACCGACGTTCTCTATGGCAACAGTTGGACAGGATaGGACCCTGGAGGGGAAAGCCTTGAAGGGACAGGT | + |
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Preference number: 3 (lower is better) Translates to: DTDVLYGNSWTG*DPGGESLEGTG Trigger: ACCTGTCCCTTCAAGGCTTTCCCCTCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR CCA 72 bp | GCAGGTCAGTTGTCATGGAGACACCGACGTTCTCTATaGCAACAGTTGGACAGGATGGGACCCTGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: AGQLSWRHRRSL*QQLDRMGPWRG Trigger: TCCCCTCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGCCACTTTTGAACCGAGAAGCCCACTGCACTGACAGGGACTGGCAGCCTAAAGGTTTATTGAACTaGGGCTGCAGGCTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EEPLLNREAHCTDRDWQPKGLLN*GCRLLL Trigger: CAGCAGCAGCCTGCAGCCCAAGTTCAATAAACCTTT...AGGCTGCCAGTCCCTGTCAGTGCAGTGGGCTTCTCGGTTCAAAAGTGGCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR TCA 72 bp | ATTCAAGCGAGTCTACTCTCTGGTCAGAGGAAAACCTaGGGGATAGGCATGGCCGCTGTTCCAGGAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IQASLLSGQRKT*GIGMAAVPGAS Trigger: GCTGGCTCCTGGAACAGCGGCCATGCCTATCCCTCAGGTTTTCCTCTGACCAGAGAGTAGACTCGCTTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR TCA 72 bp | CAGCTCCAGTCAGAGGGACCCATAGCAAGAAGTTCCTaGGTGCTGCAGGTCAGTTGTCATGGAGACACCGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLQSEGPIARSS*VLQVSCHGDTD Trigger: GTCGGTGTCTCCATGACAACTGACCTGCAGCACTCAGGAACTTCTTGCTATGGGTCCCTCTGACTGGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | GGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTaGAGTAAAGTTAGCATGCAAATGGATGGTGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGCSGGSCSAAG*SKVSMQMDGAD Trigger: ATCTGCACCATCCATTTGCATGCTAACTTTACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | GCTTCCAGACTCAGGGGTGGAATTAGCCGAGATAGATaGGGCAGGCAGGAAAGTGTGTGGGCAAGGGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: ASRLRGGISRDR*GRQESVWARVL Trigger: AAGTACCCTTGCCCACACACTTTCCTGCCTGCCCCATCTATCTCGGCTAATTCCACCCCTGAGTCTGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR TCA 72 bp | AGCTGTTCCAGAAGCAGAGTCCTGCATAGGCCCATCTaGAGAAGGGACATTTGTCAGGCGCCTGAGGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SCSRSRVLHRPI*RRDICQAPEEH Trigger: GTGTTCCTCAGGCGCCTGACAAATGTCCCTTCTTCAGATGGGCCTATGCAGGACTCTGCTTCTGGAACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR TCA 72 bp | AGAGGAGCCACTTTTGAACCGAGAAGCCCACTGCACTaGCAGGGACTGGCAGCCTTGTTTCACATTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGATFEPRSPLH*QGLAALFHIHQ Trigger: CTGGTGAATGTGAAACAAGGCTGCCAGTCCCTGTCAGTGCAGTGGGCTTCTCGGTTCAAAAGTGGCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR TCA 72 bp | ATGATTCATGTGTATGCACACATGCCCCAGGGCACATaGGGAGGTCAGAGAGGATCCCACAGGATCCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MIHVYAHMPQGT*GGQRGSHRILE Trigger: CTCCAGGATCCTGTGGGATCCTCTCTGACCTCCTCATGTGCCCTGGGGCATGTGTGCATACACATGAATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR GCA 72 bp | AGGAGCGGGGCTTGGGCAACTGAGAGAAACAGAAGATaGTCTTTGGGAAAGGGGCAGCTGTTTCCATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSGAWATERNRR*SLGKGQLFPWR Trigger: TCTCCATGGAAACAGCTGCCCCTTTCCCAAAGAGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR GCA 72 bp | CCTCAGTTTCCTAGTCTGCAGGGTGAACATTTAAAATaGTGGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PQFPSLQGEHLK*WRGLQWWLLLS Trigger: GCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGCATTTTAAATGTTCACCCTGCAGACTAGGAAACTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | TGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTaGACAGGATGGGACCCTGGAGGGGAAAGCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CHGDTDVLYGNS*TGWDPGGESLE Trigger: TTCAAGGCTTTCCCCTCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | CAGTTTCCTAGTCTGCAGGGTGAACATTTAAAATGCTaGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QFPSLQGEHLKC*RGLQWWLLLSC Trigger: GCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGCATTTTAAATGTTCACCCTGCAGACTAGGAAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR TCA 72 bp | GGAGGTCAGAGAGGATCCCACAGGATCCTGGAGCAGTaGAAAAAGGGAGAGGAGCCACTTTTGAACCGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGQRGSHRILEQ*KKGEEPLLNRE Trigger: TTCTCGGTTCAAAAGTGGCTCCTCTCCCTTTTTTCACTGCTCCAGGATCCTGTGGGATCCTCTCTGACCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | CTTTGGGAAAGGGGCAGCTGTTTCCATGGAGAGGCCTaGAGAACTGAATGTTGGGTTACCCTGAGGATACTC | + |
|
Preference number: 3 (lower is better) Translates to: LWERGSCFHGEA*RTECWVTLRIL Trigger: GAGTATCCTCAGGGTAACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAAACAGCTGCCCCTTTCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR-3UTR CAA 90 bp | GTGACACCAGAGGTGTTGGGTCTGTCCTCCATATTGACCCAGGGACAAAGTATGGGAAATACAGAAGGTTaGGGGGCAGGTCTCCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VTPEVLGLSSILTQGQSMGNTEG*GAGLQL Trigger: TAACTGGAGACCTGCCCCCAAACCTTCTGTATTTCC...CATACTTTGTCCCTGGGTCAATATGGAGGACAGACCCAACACCTCTGGTGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR GCA 72 bp | AAGAGACTCTCTGAAAGAGTGGGAATCTGGGTCACTTaGTCGTACAGGGCACGATCATCTTGTGACCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KRLSERVGIWVT*SYRARSSCDLW Trigger: CCACAGGTCACAAGATGATCGTGCCCTGTACGAGCAAGTGACCCAGATTCCCACTCTTTCAGAGAGTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR GCA 72 bp | GCTCCTGCTCAGCTGCTGGGTGGAGTAAAGTTAGCATaGAAATGGATGGTGCAGATAGCTGTTCCAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: APAQLLGGVKLA*KWMVQIAVPEA Trigger: TGCTTCTGGAACAGCTATCTGCACCATCCATTTGCATGCTAACTTTACTCCACCCAGCAGCTGAGCAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | CAGTCTGGGTGTTTCAAACTGTCTAGGAGCGGGGCTTaGGCAACTGAGAGAAACAGAAGATGCTCTTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSGCFKLSRSGA*ATERNRRCSLG Trigger: TCCCAAAGAGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAGACAGTTTGAAACACCCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | AGCAAGAAGTTCCTGAGTGCTGCAGGTCAGTTGTCATaGAGACACCGACGTTCTCTATGGCAACAGTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SKKFLSAAGQLS*RHRRSLWQQLD Trigger: GTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTGCAGCACTCAGGAACTTCTTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | GCTCAGCTGCTGGGTGGAGTAAAGTTAGCATGCAAATaGATGGTGCAGATAGCTGTTCCAGAAGCAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AQLLGGVKLACK*MVQIAVPEAES Trigger: GGACTCTGCTTCTGGAACAGCTATCTGCACCATCCATTTGCATGCTAACTTTACTCCACCCAGCAGCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | AGCTGTTTCCATGGAGAGGCCTGGAGAACTGAATGTTaGGTTACCCTGAGGATACTCAGTGGGGAAGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCFHGEAWRTEC*VTLRILSGEDC Trigger: ACAATCTTCCCCACTGAGTATCCTCAGGGTAACCCAACATTCAGTTCTCCAGGCCTCTCCATGGAAACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | GGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTTaGACTCCATGGCAACAGTCTGGGTGTTTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: GTGILLPWTPEV*TPWQQSGCFKL Trigger: CAGTTTGAAACACCCAGACTGTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | ATTCTGTTACCTTGGACACCAGAGGTTTGGACTCCATaGCAACAGTCTGGGTGTTTCAAACTGTCTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILLPWTPEVWTP*QQSGCFKLSRS Trigger: GCTCCTAGACAGTTTGAAACACCCAGACTGTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | CCTGCATTTGGGCTGGTCTTGACCCTTGAGCACACATaGGTCCTCAGAAATGGGTTGAAATTGATGGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PAFGLVLTLEHT*VLRNGLKLMVS Trigger: TGAAACCATCAATTTCAACCCATTTCTGAGGACCCATGTGTGCTCAAGGGTCAAGACCAGCCCAAATGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGAACAATCCTAGCCCAGAGAAGAGTCTGGATAAGTGTTTGGCTGCACACGTCCTCAGAAATGGGTaGAAATTGATGGTTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQNNPSPEKSLDKCLAAHVLRNG*KLMVSG Trigger: CCCTGAAACCATCAATTTCAACCCATTTCTGAGGAC...GTGTGCAGCCAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTTCTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CCA 72 bp | GAAAACGTAAAGAGACTCTCTGAAAGAGTGGGAATCTaGGTCACTTGCTCGTACAGGGCACGATCATCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ENVKRLSERVGI*VTCSYRARSSC Trigger: ACAAGATGATCGTGCCCTGTACGAGCAAGTGACCCAGATTCCCACTCTTTCAGAGAGTCTCTTTACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | AAAATGCTGGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAGTATGGGATAGCGCGCGCTaGCATCCGCCAGCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMLEGVAVVAPAQLLGGVWDSAR*HPPASL Trigger: CAGGCTGGCTGGCGGATGGCAGCGCGCGCTATCCCA...TACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGCATTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCACTTTTGAACCGAGAAGCCCACTGCACTGACAGGGACTGGCAGCCTATGGTACCACCGCGGTaGCTCACCACCTGCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPLLNREAHCTDRDWQPMVPPR*LTTCPG Trigger: GCCGGGGCAGGTGGTGAGCCACCGCGGTGGTACCAT...AGGCTGCCAGTCCCTGTCAGTGCAGTGGGCTTCTCGGTTCAAAAGTGGCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | ACACCGACGTTCTCTATGGCAACAGTTGGACAGGATGGGACCCTGGAGGGGAAAGCACGCCCCCGTTGGTaGCGCCACCAGCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPTFSMATVGQDGTLEGKARPRW*RHQLQC Trigger: GCACTGGAGCTGGTGGCGGCACCAACGGGGGCGTGC...TTTCCCCTCCAGGGTCCCATCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | AAAATGCTGGAGGGGGTTGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAGTACCAGCCAGCCTGCAGTaGAGCGGTCCAACAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KMLEGVAVVAPAQLLGGVPASLQ*SGPTAA Trigger: TGCAGCTGTTGGACCGCTGCACTGCAGGCTGGCTGG...TACTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGCATTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR CCA 90 bp | ATGTGTATGCACACATGCCCCAGGGCACATGAGGAGGTCAGAGAGGATCCCACAGCCTGGAGCCGGATCTaGGGCACCTGGAGCGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MCMHTCPRAHEEVREDPTAWSRI*GTWSAV Trigger: TACCGCGCTCCAGGTGCCCCAGATCCGGCTCCAGGC...TGTGGGATCCTCTCTGACCTCCTCATGTGCCCTGGGGCATGTGTGCATACACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | GATGGGGCAGGCAGGAAAGTGTGTGGGCAAGGGTACTaGCTGGTTCCAGCAGCATCTGAGACCTGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DGAGRKVCGQGY*LVPAASETWRL Trigger: GAGCCTCCAGGTCTCAGATGCTGCTGGAACCAGCAAGTACCCTTGCCCACACACTTTCCTGCCTGCCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR TCA 90 bp | GTTTCAAACTGTCTAGGAGCGGGGCTTGGGCAACTGAGAGAAACAGAAGATGCTGCCCAGAGTGCGCGGTaGCCGAGGGCTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSNCLGAGLGQLRETEDAAQSAR*PRAPGA Trigger: TGCTCCAGGAGCCCTCGGTCACCGCGCACTCTGGGC...AGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAGACAGTTTGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | GTTTCAAACTGTCTAGGAGCGGGGCTTGGGCAACTGAGAGAAACAGAAGATGCTCAGGGAAACCCAGGCTaGGCACGCCGGGCCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSNCLGAGLGQLRETEDAQGNPG*ARRAED Trigger: GTCCTCGGCCCGGCGTGCGCAGCCTGGGTTTCCCTG...AGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAGACAGTTTGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR CCA 90 bp | GTTTCAAACTGTCTAGGAGCGGGGCTTGGGCAACTGAGAGAAACAGAAGATGCTCGACCTTGGCCACTGTaGCACCCCGCGCAGCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VSNCLGAGLGQLRETEDARPWPL*HPAQRT Trigger: CGTGCGCTGCGCGGGGTGCCACAGTGGCCAAGGTCG...AGCATCTTCTGTTTCTCTCAGTTGCCCAAGCCCCGCTCCTAGACAGTTTGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGATTGTCTCCACAGCAGTCCACCAGGGCAGGGACAGACAAAAATGAAGTGCCACTTTCGTCCACTTaGGGCGGACGCCGTCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSPQQSTRAGTDKNEVPLSST*GGRRRD Trigger: GTCACGACGGCGTCCGCCTCAAGTGGACGAAAGTGG...CACTTCATTTTTGTCTGTCCCTGCCCTGGTGGACTGCTGTGGAGACAATCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR TCA 90 bp | GGAAGATTGTCTCCACAGCAGTCCACCAGGGCAGGGACAGACAAAAATGAAGTGCCTCCAGCTCATTGGTaGCCTCGCACTCGTAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSPQQSTRAGTDKNEVPPAHW*PRTRSA Trigger: GGCGCTACGAGTGCGAGGTCACCAATGAGCTGGAGG...CACTTCATTTTTGTCTGTCCCTGCCCTGGTGGACTGCTGTGGAGACAATCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | CAGGTCAGTTGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTGGACAGGAGCACGACTTTCTTCCTaGCACGCTGCGCCCCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSCHGDTDVLYGNSWTGARLSS*HAAPLR Trigger: TCGCAGGGGCGCAGCGTGGCAGGAAGAAAGTCGTGC...TCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | GTGACACCAGAGGTGTTGGGTCTGTCCTCCATATTGACCCAGGGACAAAGTATGCACGCAGCGAACAGCTaGCCGACCTTGGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTPEVLGLSSILTQGQSMHAANS*PTLATV Trigger: CACAGTGGCCAAGGTCGGGCAGCTGTTCGCTGCGTG...CATACTTTGTCCCTGGGTCAATATGGAGGACAGACCCAACACCTCTGGTGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR CCA 90 bp | CAGGTCAGTTGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTGGACAGGACGGATCTGGGGCACCTaGAGCGCGGTAGCAGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSCHGDTDVLYGNSWTGRIWGT*SAVAVD Trigger: GTCTACTGCTACCGCGCTCCAGGTGCCCCAGATCCG...TCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | TCTGTGGGTGTAGCGGGTGAGCCTGGTAAGGCTGCATaGGTGGCCTATGTGACCTTAAGAAGCCGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVGVAGEPGKAA*VAYVTLRSRAA Trigger: AGCTGCTCGGCTTCTTAAGGTCACATAGGCCACCAATGCAGCCTTACCAGGCTCACCCGCTACACCCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | AGTCTGCAGGGTGAACATTTAAAATGCTGGAGGGGGTaGCAGTGGTGGCTCCTGCTCAGCTGCTGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQGEHLKCWRG*QWWLLLSCWVE Trigger: CTCCACCCAGCAGCTGAGCAGGAGCCACCACTGCAACCCCCTCCAGCATTTTAAATGTTCACCCTGCAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR TCA 90 bp | CAGGTCAGTTGTCATGGAGACACCGACGTTCTCTATGGCAACAGTTGGACAGGACCGGGAGGTTGGACGTaGAGCAGAAGGCATCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVSCHGDTDVLYGNSWTGPGGWT*SRRHRS Trigger: GCTACGATGCCTTCTGCTTCACGTCCAACCTCCCGG...TCCTGTCCAACTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | CCTCAGAACAATCCTAGCCCAGAGAAGAGTCTGGATAAGTGTTTGGCTGCACACCAGCGGTCCAACAGCTaGAGCTTCCACGCAGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQNNPSPEKSLDKCLAAHQRSNS*SFHAAN Trigger: GTTCGCTGCGTGGAAGCTGCAGCTGTTGGACCGCTG...GTGTGCAGCCAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| CDS-3UTR GCA 90 bp | GATGAAATATCCACTATCCAAAGGGGATCCTCAGAGGGCAACATAGTCAGCGACTCGGCACAAGCACGCTaGGCTTCCACGAAAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DEISTIQRGSSEGNIVSDSAQAR*ASTKVI Trigger: GATGACTTTCGTGGAAGCGCAGCGTGCTTGTGCCGA...GTCGCTGACTATGTTGCCCTCTGAGGATCCCCTTTGGATAGTGGATATTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | ACCCATAGCAAGAAGTTCCTGAGTGCTGCAGGTCAGTaGTCATGGAGACACCGACGTTCTCTATGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: THSKKFLSAAGQ*SWRHRRSLWQQ Trigger: CTGTTGCCATAGAGAACGTCGGTGTCTCCATGACAACTGACCTGCAGCACTCAGGAACTTCTTGCTATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | AGGGACAGGTATTCTGTTACCTTGGACACCAGAGGTTaGGACTCCATGGCAACAGTCTGGGTGTTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RDRYSVTLDTRG*DSMATVWVFQT Trigger: AGTTTGAAACACCCAGACTGTTGCCATGGAGTCCAAACCTCTGGTGTCCAAGGTAACAGAATACCTGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | GTTGAAATTGATGGTTTCAGGGAGAATCTGCCCTCCTaGATTTCCAAGAAGGAAAGGTCGGCCTTTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VEIDGFRENLPS*ISKKERSAFVR Trigger: CCGCACAAAGGCCGACCTTTCCTTCTTGGAAATCAAGGAGGGCAGATTCTCCCTGAAACCATCAATTTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | TTGACCCTTGAGCACACATGGGTCCTCAGAAATGGGTaGAAATTGATGGTTTCAGGGAGAATCTGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLEHTWVLRNG*KLMVSGRICPP Trigger: AGGAGGGCAGATTCTCCCTGAAACCATCAATTTCAACCCATTTCTGAGGACCCATGTGTGCTCAAGGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
||
| 3UTR CAA 72 bp | AACAATCCTAGCCCAGAGAAGAGTCTGGATAAGTGTTaGGCTGCACACTTTAGAACAAAAGGTGTGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NNPSPEKSLDKC*AAHFRTKGVTG Trigger: TCCAGTCACACCTTTTGTTCTAAAGTGTGCAGCCAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 90 bp | GGTCCAACAGCTGCAGCTTCCACGCAGCGAACAGCTGCCCGACCTTaGCCACTGTGGCACCCCGCGCAGCGCACGCGCGCACTGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: GPTAAASTQRTAARP*PLWHPAQRTRALPR Trigger: CCGGGGCAGTGCGCGCGTGCGCTGCGCGGGGTGCCACAGTGGCCAAGGTCGGGCAGCTGTTCGCTGCGTGGAAGCTGCAGCTGTTGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | CCCGACCTTGGCCACTGTGGCACCCCGCGCAGCGCACGCGCGCACTaGCCCGGCCAAGGCCACAGGTCGCAGCGGTTTCAGGAAAAACAC | + |
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Preference number: 5 (lower is better) Translates to: PDLGHCGTPRSARAH*PGQGHRSQRFQEKH Trigger: GTGTTTTTCCTGAAACCGCTGCGACCTGTGGCCTTGGCCGGGGCAGTGCGCGCGTGCGCTGCGCGGGGTGCCACAGTGGCCAAGGTCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | CCACGGAACCGGACTCGCCCTCCAGCACGTGCACGACTTTCTTCCTaGCACGCTGCGCCCCTGCGAGCACGGGGACCAGCAGCAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PRNRTRPPARARLSS*HAAPLRARGPAAGV Trigger: GACTCCTGCTGCTGGTCCCCGTGCTCGCAGGGGCGCAGCGTGGCAGGAAGAAAGTCGTGCACGTGCTGGAGGGCGAGTCCGGTTCCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | ACAATGGTACCACCGCGGTGGCTCACCACCTGCCCCGGCGCCGTCTaGACCACCACGGAACCGGACTCGCCCTCCAGCACGTGCACGACT | + |
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Preference number: 5 (lower is better) Translates to: TMVPPRWLTTCPGAV*TTTEPDSPSSTCTT Trigger: AGTCGTGCACGTGCTGGAGGGCGAGTCCGGTTCCGTGGTGGTGCAGACGGCGCCGGGGCAGGTGGTGAGCCACCGCGGTGGTACCATTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | ATCCATAGTTGCGCACGCCCCCGTTGGTGCCGCCACCAGCTCCAGTaGTCCCAGTCCCGCCACAGGGCTCCCGGGCATGGCTCACTGGGT | + |
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Preference number: 5 (lower is better) Translates to: IHSCARPRWCRHQLQ*SQSRHRAPGHGSLG Trigger: ACCCAGTGAGCCATGCCCGGGAGCCCTGTGGCGGGACTGGGAGCACTGGAGCTGGTGGCGGCACCAACGGGGGCGTGCGCAACTATGGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 90 bp | GACCGTGGGCGGCCGCCTCGTAGTGGTAACGGCAGGGTAAGACAATaGTACCACCGCGGTGGCTCACCACCTGCCCCGGCGCCGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: DRGRPPRSGNGRVRQ*YHRGGSPPAPAPSA Trigger: TGCAGACGGCGCCGGGGCAGGTGGTGAGCCACCGCGGTGGTACCATTGTCTTACCCTGCCGTTACCACTACGAGGCGGCCGCCCACGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | GGCCATCGCGCCAGGCCGCGTGCAGCTGCTCCGCGGACGCCAAAATaGCATCCTGTTCGGCACAAGCACGCTGCGCTTCCACGAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: GHRARPRAAAPRTPK*HPVRHKHAALPRKS Trigger: TGACTTTCGTGGAAGCGCAGCGTGCTTGTGCCGAACAGGATGGCATTTTGGCGTCCGCGGAGCAGCTGCACGCGGCCTGGCGCGATGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | CCTCAGCGTTATGACGATATCCATAGTTGCGCACGCCCCCGTTGGTaGCGCCACCAGCTCCAGTGCTCCCAGTCCCGCCACAGGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PQRYDDIHSCARPRW*RHQLQCSQSRHRAP Trigger: GGGAGCCCTGTGGCGGGACTGGGAGCACTGGAGCTGGTGGCGGCACCAACGGGGGCGTGCGCAACTATGGATATCGTCATAACGCTGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | AGTAGACACCGAAGAGACGTCGGGAGGCGTCAGGGAAACCCAGGCTaGGCACGCCGGGCCGAGGACCTCCACAGCGAGTTCGCGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: SRHRRDVGRRQGNPG*ARRAEDLHSEFADS Trigger: TGAATCCGCGAACTCGCTGTGGAGGTCCTCGGCCCGGCGTGCGCAGCCTGGGTTTCCCTGACGCCTCCCGACGTCTCTTCGGTGTCTACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS TCA 90 bp | CGAAGACATCGGCGAAAGCCAAAGGGTCTACCACTTTCGTCCACTTaGGGCGGACGCCGTCGTGACCGTGGGCGGCCGCCTCGTAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RRHRRKPKGLPLSST*GGRRRDRGRPPRSG Trigger: ACCACTACGAGGCGGCCGCCCACGGTCACGACGGCGTCCGCCTCAAGTGGACGAAAGTGGTAGACCCTTTGGCTTTCGCCGATGTCTTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 90 bp | AGAAGGCATCGTAGCGTTCCTCAGCGTTATGACGATATCCATAGTTaGGCACGCCCCCGTTGGTGCCGCCACCAGCTCCAGTGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRHRSVPQRYDDIHS*ARPRWCRHQLQCSQ Trigger: CTGGGAGCACTGGAGCTGGTGGCGGCACCAACGGGGGCGTGCGCAACTATGGATATCGTCATAACGCTGAGGAACGCTACGATGCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS-3UTR CAA 90 bp | GGAAGATTGTCTCCACAGCAGTCCACCAGGGCAGGGACAGACAAAAATGAAGTGACGCGGCCCGGGAGGTaGGACGTGAAGCAGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GRLSPQQSTRAGTDKNEVTRPGR*DVKQKA Trigger: TGCCTTCTGCTTCACGTCCAACCTCCCGGGCCGCGT...CACTTCATTTTTGTCTGTCCCTGCCCTGGTGGACTGCTGTGGAGACAATCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS TCA 90 bp | GTCGCAGCGGTTTCAGGAAAAACACGCGGCCCGGGAGGTTGGACGTaGAGCAGAAGGCATCGTAGCGTTCCTCAGCGTTATGACGATATC | + |
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Preference number: 5 (lower is better) Translates to: VAAVSGKTRGPGGWT*SRRHRSVPQRYDDI Trigger: GATATCGTCATAACGCTGAGGAACGCTACGATGCCTTCTGCTTCACGTCCAACCTCCCGGGCCGCGTGTTTTTCCTGAAACCGCTGCGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | CCACCGCGGTGGCTCACCACCTGCCCCGGCGCCGTCTaGACCACCACGGAACCGGACTCGCCCTCCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: PPRWLTTCPGAV*TTTEPDSPSST Trigger: CGTGCTGGAGGGCGAGTCCGGTTCCGTGGTGGTGCAGACGGCGCCGGGGCAGGTGGTGAGCCACCGCGGTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 72 bp | TCCACGCAGCGAACAGCTGCCCGACCTTGGCCACTGTaGCACCCCGCGCAGCGCACGCGCGCACTGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: STQRTAARPWPL*HPAQRTRALPR Trigger: CCGGGGCAGTGCGCGCGTGCGCTGCGCGGGGTGCCACAGTGGCCAAGGTCGGGCAGCTGTTCGCTGCGTGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CAA 90 bp | CGGTCCAACAGCTGCAGCTTCCACGCAGCGAACAGCTGCCCGACCTaGGCCACTGTGGCACCCCGCGCAGCGCACGCGCGCACTGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: RSNSCSFHAANSCPT*ATVAPRAAHARTAP Trigger: CGGGGCAGTGCGCGCGTGCGCTGCGCGGGGTGCCACAGTGGCCAAGGTCGGGCAGCTGTTCGCTGCGTGGAAGCTGCAGCTGTTGGACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 72 bp | GCTGCAGCTTCCACGCAGCGAACAGCTGCCCGACCTTaGCCACTGTGGCACCCCGCGCAGCGCACGCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: AAASTQRTAARP*PLWHPAQRTRA Trigger: TGCGCGCGTGCGCTGCGCGGGGTGCCACAGTGGCCAAGGTCGGGCAGCTGTTCGCTGCGTGGAAGCTGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | CGGACTCGCCCTCCAGCACGTGCACGACTTTCTTCCTaGCACGCTGCGCCCCTGCGAGCACGGGGACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RTRPPARARLSS*HAAPLRARGPA Trigger: TGCTGGTCCCCGTGCTCGCAGGGGCGCAGCGTGGCAGGAAGAAAGTCGTGCACGTGCTGGAGGGCGAGTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | CGGTCCAACAGCTGCAGCTTCCACGCAGCGAACAGCTaGCCGACCTTGGCCACTGTGGCACCCCGCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RSNSCSFHAANS*PTLATVAPRAA Trigger: CGCTGCGCGGGGTGCCACAGTGGCCAAGGTCGGGCAGCTGTTCGCTGCGTGGAAGCTGCAGCTGTTGGACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | CGAAGAGACGTCGGGAGGCGTCAGGGAAACCCAGGCTaGGCACGCCGGGCCGAGGACCTCCACAGCGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RRDVGRRQGNPG*ARRAEDLHSEF Trigger: GAACTCGCTGTGGAGGTCCTCGGCCCGGCGTGCGCAGCCTGGGTTTCCCTGACGCCTCCCGACGTCTCTTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 72 bp | CCAGCCCCAGCCGCCTGGAGCCGGATCTGGGGCACCTaGAGCGCGGTAGCAGTAGACACCGAAGAGACGTCG | + |
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Preference number: 6 (lower is better) Translates to: PAPAAWSRIWGT*SAVAVDTEETS Trigger: CGACGTCTCTTCGGTGTCTACTGCTACCGCGCTCCAGGTGCCCCAGATCCGGCTCCAGGCGGCTGGGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | CCCTCCAGCACGTGCACGACTTTCTTCCTGCCACGCTaGGCCCCTGCGAGCACGGGGACCAGCAGCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: PSSTCTTFFLPR*APASTGTSSRS Trigger: ACTCCTGCTGCTGGTCCCCGTGCTCGCAGGGGCGCAGCGTGGCAGGAAGAAAGTCGTGCACGTGCTGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 72 bp | CGGCCGCCTCGTAGTGGTAACGGCAGGGTAAGACAATaGTACCACCGCGGTGGCTCACCACCTGCCCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RPPRSGNGRVRQ*YHRGGSPPAPA Trigger: CGCCGGGGCAGGTGGTGAGCCACCGCGGTGGTACCATTGTCTTACCCTGCCGTTACCACTACGAGGCGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS CCA 72 bp | CCAGTGCTCCCAGTCCCGCCACAGGGCTCCCGGGCATaGCTCACTGGGTACTGCACCGAGCCATCGCGTAAC | + |
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Preference number: 6 (lower is better) Translates to: PVLPVPPQGSRA*LTGYCTEPSRN Trigger: GTTACGCGATGGCTCGGTGCAGTACCCAGTGAGCCATGCCCGGGAGCCCTGTGGCGGGACTGGGAGCACTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS TCA 72 bp | CGGCGAAAGCCAAAGGGTCTACCACTTTCGTCCACTTaGGGCGGACGCCGTCGTGACCGTGGGCGGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: RRKPKGLPLSST*GGRRRDRGRPP Trigger: AGGCGGCCGCCCACGGTCACGACGGCGTCCGCCTCAAGTGGACGAAAGTGGTAGACCCTTTGGCTTTCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | GCCAGGCCGCGTGCAGCTGCTCCGCGGACGCCAAAATaGCATCCTGTTCGGCACAAGCACGCTGCGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ARPRAAAPRTPK*HPVRHKHAALP Trigger: TGGAAGCGCAGCGTGCTTGTGCCGAACAGGATGGCATTTTGGCGTCCGCGGAGCAGCTGCACGCGGCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | TATGACGATATCCATAGTTGCGCACGCCCCCGTTGGTaGCGCCACCAGCTCCAGTGCTCCCAGTCCCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: YDDIHSCARPRW*RHQLQCSQSRH Trigger: GTGGCGGGACTGGGAGCACTGGAGCTGGTGGCGGCACCAACGGGGGCGTGCGCAACTATGGATATCGTCATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS GCA 72 bp | CGTAGCGTTCCTCAGCGTTATGACGATATCCATAGTTaGGCACGCCCCCGTTGGTGCCGCCACCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSVPQRYDDIHS*ARPRWCRHQLQ Trigger: CTGGAGCTGGTGGCGGCACCAACGGGGGCGTGCGCAACTATGGATATCGTCATAACGCTGAGGAACGCTACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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| CDS TCA 72 bp | GTTTCAGGAAAAACACGCGGCCCGGGAGGTTGGACGTaGAGCAGAAGGCATCGTAGCGTTCCTCAGCGTTAT | + |
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Preference number: 6 (lower is better) Translates to: VSGKTRGPGGWT*SRRHRSVPQRY Trigger: ATAACGCTGAGGAACGCTACGATGCCTTCTGCTTCACGTCCAACCTCCCGGGCCGCGTGTTTTTCCTGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007738.11 |
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