Pregenerated sensors for HAPLN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030606Ensembl transcript IDs: ENSMUST00000032827.9, ENSMUST00000205782.2, ENSMUST00000206092.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGATGCAGGCGGTGGTGGCGCTGGCCATAGCTGCGAACACCAGGTaGCAGACCCAGGCCTCCACAGGGCTGCCGGGGCAGCACTATTGG | + |
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Preference number: 1 (lower is better) Translates to: TMQAVVALAIAANTR*QTQASTGLPGQHYW Trigger: CCAATAGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTGGTGTTCGCAGCTATGGCCAGCGCCACCACCGCCTGCATCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR TCA 90 bp | GCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTaGCAGGCCTCCCGGGCCTCCAGCAGCGTCAGCTTCTTGGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: AAKSWPTVEICAPSS*QASRASSSVSFLGF Trigger: GAACCCCAAGAAGCTGACGCTGCTGGAGGCCCGGGAGGCCTGTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 90 bp | AGAACACATCATAACGATGCAGGCGGTGGTGGCGCTGGCCATAGCTaGGAACACCAGGTGCCAGACCCAGGCCTCCACAGGGCTGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: RTHHNDAGGGGAGHS*EHQVPDPGLHRAAG Trigger: CCCGGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTGGTGTTCGCAGCTATGGCCAGCGCCACCACCGCCTGCATCGTTATGATGTGTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 90 bp | ACGGAACTTCCAAGCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTaGACCATCTTCCTGACAGGCCTCCCGGGCCTCCAGCAGCGTCAG | + |
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Preference number: 1 (lower is better) Translates to: TELPSRKELAHRGDL*TIFLTGLPGLQQRQ Trigger: CTGACGCTGCTGGAGGCCCGGGAGGCCTGTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGAAGTTCCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR CCA 90 bp | GATCCAGGCCACGGAACTTCCAAGCCGCAAAGAGCTGGCCCACCGTaGAGATCTGTGCACCATCTTCCTGACAGGCCTCCCGGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: DPGHGTSKPQRAGPP*RSVHHLPDRPPGPP Trigger: TGGAGGCCCGGGAGGCCTGTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGAAGTTCCGTGGCCTGGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 90 bp | GCACTATTGGGTACTGCACGGAGGCATCCTGCAGCCAGCCTGCATTaGACCAGTCTAGGCCTTCCTCCCAGGCTCGGAAAAGCTGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: ALLGTARRHPAASLH*TSLGLPPRLGKAAQ Trigger: TTGAGCAGCTTTTCCGAGCCTGGGAGGAAGGCCTAGACTGGTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCAGTACCCAATAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR TCA 90 bp | CCTTGTCAGAATGACACTACGTTTGATGGACCCTGTCACGGTCCCTaGGAGTGTGTGAATACAGCGTGTTTGTGCGAACACATAGAACCT | + |
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Preference number: 1 (lower is better) Translates to: PCQNDTTFDGPCHGP*ECVNTACLCEHIEP Trigger: AGGTTCTATGTGTTCGCACAAACACGCTGTATTCACACACTCTCAGGGACCGTGACAGGGTCCATCAAACGTAGTGTCATTCTGACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 90 bp | AGGGATCAGTTGGAAAGGAAGGAAGGGAATCATAGCATCCTTTGTTaGCCAAATAAGGTACACACAGCCAGAGAGTCACTGCTAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RDQLERKEGNHSILC*PNKVHTARESLLSR Trigger: CCTGCTTAGCAGTGACTCTCTGGCTGTGTGTACCTTATTTGGCCAACAAAGGATGCTATGATTCCCTTCCTTCCTTTCCAACTGATCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR GCA 90 bp | GACCCTGTCTCGAAACAACAAAAGAAGCACTCAAGAGAGACTAAATaGACCAGACTTGGTAGCATAGCCTACAATCCCAGCTACTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: DPVSKQQKKHSRETK*TRLGSIAYNPSYLH Trigger: ATGCAAGTAGCTGGGATTGTAGGCTATGCTACCAAGTCTGGTGCATTTAGTCTCTCTTGAGTGCTTCTTTTGTTGTTTCGAGACAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CAA 90 bp | CAGGTGCCAGACCCAGGCCTCCACAGGGCTGCCGGGGCAGCACTATaGGGTACTGCACGGAGGCATCCTGCAGCCAGCCTGCATTGCACC | + |
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Preference number: 2 (lower is better) Translates to: QVPDPGLHRAAGAAL*GTARRHPAASLHCT Trigger: GGTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCATAGCTGCGAACACCAGGTGCCAGACCCAGGCCTCCACAGGGCTGCCTGCACGGAGGCATCCTaGAGCCAGCCTGCATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: AGHSCEHQVPDPGLHRAACTEAS*SQPALH Trigger: GTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCA...GGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTGGTGTTCGCAGCTATGGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR-3UTR TCA 90 bp | GATGTACAGCTAGCCACCCTGCTAATGCTGGACATAGCAGTAGACACCATAGCGTGTGCACCATCTTCCTaGCAGGCCTCCCGGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DVQLATLLMLDIAVDTIACAPSS*QASRAS Trigger: GGAGGCCCGGGAGGCCTGTCAGGAAGATGGTGCACA...CGCTATGGTGTCTACTGCTATGTCCAGCATTAGCAGGGTGGCTAGCTGTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCAGATGTACGCGGGCACTTCCGTCTaGCAGCCAGCCAGCATCACA | + |
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Preference number: 2 (lower is better) Translates to: MVHLINTQPRKSGAEQMYAGTSV*QPASIT Trigger: TGTGATGCTGGCTGGCTGGCAGACGGAAGTGCCCGC...GTACATCTGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTCAGCCTCTGAGACCCTTTAGAAAGCACAGGAGCCCCTGTTTCATGAAACCAATGGACCCCAAGTaGCCCAGAGAAGGATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GPQPLRPFRKHRSPCFMKPMDPK*PREGCQ Trigger: CTGGCATCCTTCTCTGGGGCACTTGGGGTCCATTGG...TTTCATGAAACAGGGGCTCCTGTGCTTTCTAAAGGGTCTCAGAGGCTGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGGGAAGTATAAAAACTATCCAAGCAATCCCCCAACCCACAAGGGACAATGCTAAGCAGGGGACATaGGGAGGAGACCTAGACTCT | + |
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Preference number: 2 (lower is better) Translates to: KLGSIKTIQAIPQPTRDNAKQGT*GGDLDS Trigger: AGAGTCTAGGTCTCCTCCCCATGTCCCCTGCTTAGC...ATTGTCCCTTGTGGGTTGGGGGATTGCTTGGATAGTTTTTATACTTCCCAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGGGAAGTATAAAAACTATCCAAGCAATCCCCCAACCCACAAGGGACAATGCAGCGTCAGCTTCTTaGGGTTCTCCAGGTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: KLGSIKTIQAIPQPTRDNAASAS*GSPGST Trigger: TGTACTACCTGGAGAACCCCAAGAAGCTGACGCTGC...ATTGTCCCTTGTGGGTTGGGGGATTGCTTGGATAGTTTTTATACTTCCCAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 72 bp | GCGGTGGTGGCGCTGGCCATAGCTGCGAACACCAGGTaGCAGACCCAGGCCTCCACAGGGCTGCCGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: AVVALAIAANTR*QTQASTGLPGQ Trigger: CTGCCCCGGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTGGTGTTCGCAGCTATGGCCAGCGCCACCACCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR CCA 72 bp | ACCCAGGCCTCCACAGGGCTGCCGGGGCAGCACTATTaGGTACTGCACGGAGGCATCCTGCAGCCAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: TQASTGLPGQHY*VLHGGILQPAC Trigger: GCAGGCTGGCTGCAGGATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 72 bp | CGAACACCAGGTGCCAGACCCAGGCCTCCACAGGGCTaGCGGGGCAGCACTATTGGGTACTGCACGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RTPGARPRPPQG*RGSTIGYCTEA Trigger: TGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTGGTGTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR TCA 72 bp | AGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTaGCAGGCCTCCCGGGCCTCCAGCAGCGTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SWPTVEICAPSS*QASRASSSVSF Trigger: GAAGCTGACGCTGCTGGAGGCCCGGGAGGCCTGTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 72 bp | CCTCCACAGGGCTGCCGGGGCAGCACTATTGGGTACTaGACGGAGGCATCCTGCAGCCAGCCTGCATTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PPQGCRGSTIGY*TEASCSQPALH Trigger: GTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR GCA 72 bp | GGTACTGCACGGAGGCATCCTGCAGCCAGCCTGCATTaGACCAGTCTAGGCCTTCCTCCCAGGCTCGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GTARRHPAASLH*TSLGLPPRLGK Trigger: TTTTCCGAGCCTGGGAGGAAGGCCTAGACTGGTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCAGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR CCA 72 bp | CACGGAACTTCCAAGCCGCAAAGAGCTGGCCCACCGTaGAGATCTGTGCACCATCTTCCTGACAGGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: HGTSKPQRAGPP*RSVHHLPDRPP Trigger: GGGAGGCCTGTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGAAGTTCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR CCA 72 bp | GACATAGCAGTAGACACCATAGCGGGTGTGGGGGTCTaGGAAGCCAAAGGTCCGTACTCCAGGCTCAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: DIAVDTIAGVGV*EAKGPYSRLRG Trigger: CCCCCTGAGCCTGGAGTACGGACCTTTGGCTTCCCAGACCCCCACACCCGCTATGGTGTCTACTGCTATGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTGACTGCAGCCAGCCTGCATaGCACCAGTCTAGGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SKPQRAGPPWRSVHHLPDCSQPA*HQSRPS Trigger: GGAAGGCCTAGACTGGTGCAATGCAGGCTGGCTGCA...GTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| 3UTR-3UTR CAA 90 bp | ATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCAGATGTACGGAGACCTAGACTCTTaGGAACCAGGAGAAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: MVHLINTQPRKSGAEQMYGDLDS*EPGEEG Trigger: CCCTTCTTCTCCTGGTTCCAAAGAGTCTAGGTCTCC...GTACATCTGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR TCA 72 bp | TGGGAACTTAAGACAAGGCATGATGTCTCAGTGAGCTaGGACAGGAGCCAGCCTGGGCTACATAGTAGGACC | + |
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Preference number: 3 (lower is better) Translates to: WELKTRHDVSVS*DRSQPGLHSRT Trigger: GGTCCTACTATGTAGCCCAGGCTGGCTCCTGTCTCAGCTCACTGAGACATCATGCCTTGTCTTAAGTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR GCA 72 bp | TGCACTCATCCCCCTGTGCCATTCTGTGGTTCTGAGTaGAGCTTTGCAGGTGGGCTCAATGGGAACTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: CTHPPVPFCGSE*SFAGGLNGNLR Trigger: TCTTAAGTTCCCATTGAGCCCACCTGCAAAGCTGCACTCAGAACCACAGAATGGCACAGGGGGATGAGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 72 bp | AAGGTCAAACCAAACCAGCATGCAGGGGCAGCCCAGTaGAAGATGGAGGACAGGAGTTATTCCATGCTTACC | + |
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Preference number: 3 (lower is better) Translates to: KVKPNQHAGAAQ*KMEDRSYSMLT Trigger: GGTAAGCATGGAATAACTCCTGTCCTCCATCTTCCACTGGGCTGCCCCTGCATGCTGGTTTGGTTTGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 72 bp | GTTTCCTCAAGTAGGGATGGCAGCTGTACCAGAACATaGCAGAGCCTTTTTAAGCCAATGGACCCCAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VSSSRDGSCTRT*QSLFKPMDPKC Trigger: GCACTTGGGGTCCATTGGCTTAAAAAGGCTCTGCCATGTTCTGGTACAGCTGCCATCCCTACTTGAGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR TCA 72 bp | AATGACACTACGTTTGATGGACCCTGTCACGGTCCCTaGGAGTGTGTGAATACAGCGTGTTTGTGCGAACAC | + |
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Preference number: 3 (lower is better) Translates to: NDTTFDGPCHGP*ECVNTACLCEH Trigger: GTGTTCGCACAAACACGCTGTATTCACACACTCTCAGGGACCGTGACAGGGTCCATCAAACGTAGTGTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR GCA 72 bp | GAAAGGGAGCTAGTCATAGCTATTGCCCATTGTGAGTaGCAGTTTCCTCAAGTAGGGATGGCAGCTGTACCA | + |
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Preference number: 3 (lower is better) Translates to: ERELVIAIAHCE*QFPQVGMAAVP Trigger: TGGTACAGCTGCCATCCCTACTTGAGGAAACTGGCACTCACAATGGGCAATAGCTATGACTAGCTCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR TCA 72 bp | AGCTATACAGAAAGCTCAAGACCAGCTCTGGTTATGTaGGACTGTCTCAATCCCTGCTCATCTCCCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: SYTESSRPALVM*DCLNPCSSPFL Trigger: GAGGAAGGGAGATGAGCAGGGATTGAGACAGTCTCACATAACCAGAGCTGGTCTTGAGCTTTCTGTATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR TCA 72 bp | GTGCGAACACATAGAACCTATTTGTGTGTGTATGCCTaGATGCACTCATCCCCCTGTGCCATTCTGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: VRTHRTYLCVYA*MHSSPCAILWF Trigger: GAACCACAGAATGGCACAGGGGGATGAGTGCATTCAGGCATACACACACAAATAGGTTCTATGTGTTCGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR GCA 72 bp | TCTAGTTCCAGGGGATCAAGTGCCCTAACTGACCTCTaGAGGCTTCTATACACACTTGCCCATACACACAAA | + |
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Preference number: 3 (lower is better) Translates to: SSSRGSSALTDL*RLLYTLAHTHK Trigger: TTTGTGTGTATGGGCAAGTGTGTATAGAAGCCTGCAGAGGTCAGTTAGGGCACTTGATCCCCTGGAACTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 72 bp | CCATCCTCAGCTATACAGAAAGCTCAAGACCAGCTCTaGTTATGTGAGACTGTCTCAATCCCTGCTCATCTC | + |
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Preference number: 3 (lower is better) Translates to: PSSAIQKAQDQL*LCETVSIPAHL Trigger: GAGATGAGCAGGGATTGAGACAGTCTCACATAACCAGAGCTGGTCTTGAGCTTTCTGTATAGCTGAGGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 72 bp | CATAGATGTAGTCCCAGCACTGGGGAACAAGAGGATTaGAGTCTAAGGCCATCCTCAGCTATACAGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: HRCSPSTGEQED*SLRPSSAIQKA Trigger: AGCTTTCTGTATAGCTGAGGATGGCCTTAGACTCCAATCCTCTTGTTCCCCAGTGCTGGGACTACATCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR GCA 72 bp | GAACACATAGAACCTATTTGTGTGTGTATGCCTGAATaGACTCATCCCCCTGTGCCATTCTGTGGTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: EHIEPICVCMPE*THPPVPFCGSE Trigger: CTCAGAACCACAGAATGGCACAGGGGGATGAGTGCATTCAGGCATACACACACAAATAGGTTCTATGTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR GCA 72 bp | TGGTGTGTGAGTCCTGTGTGTTCAGTAACAGCTAGTTaGCTTGTCAGAATGACACTACGTTTGATGGACCCT | + |
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Preference number: 3 (lower is better) Translates to: WCVSPVCSVTAS*LVRMTLRLMDP Trigger: AGGGTCCATCAAACGTAGTGTCATTCTGACAAGGCAACTAGCTGTTACTGAACACACAGGACTCACACACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 72 bp | TTGGAAAGGAAGGAAGGGAATCATAGCATCCTTTGTTaGCCAAATAAGGTACACACAGCCAGAGAGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: LERKEGNHSILC*PNKVHTARESL Trigger: CAGTGACTCTCTGGCTGTGTGTACCTTATTTGGCCAACAAAGGATGCTATGATTCCCTTCCTTCCTTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CCA 72 bp | TCTATGGAGTCACACTTTGATCACATGACTCTAAGATaGTGTGTGAGTCCTGTGTGTTCAGTAACAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: SMESHFDHMTLR*CVSPVCSVTAS Trigger: ACTAGCTGTTACTGAACACACAGGACTCACACACCATCTTAGAGTCATGTGATCAAAGTGTGACTCCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CAA 72 bp | GACCCAGGCCTCCACAGGGCTGCCGGGGCAGCACTATaGGGTACTGCACGGAGGCATCCTGCAGCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DPGLHRAAGAAL*GTARRHPAASL Trigger: CAGGCTGGCTGCAGGATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR TCA 90 bp | CTGCGAACACCAGGTGCCAGACCCAGGCCTCCACAGGGCTGCCGGGGCAGCACTTGGCTCCTTGGTGACTaGACAGGGACTCCTCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: LRTPGARPRPPQGCRGSTWLLGD*TGTPPS Trigger: CGACGGAGGAGTCCCTGTTCAGTCACCAAGGAGCCA...AGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGTCTGGCACCTGGTGTTCGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR TCA 90 bp | TCCACAGGGCTGCCGGGGCAGCACTATTGGGTACTGCACGGAGGCATCCTGCAGACGCTGGCTCCTTGGTaGCTGAACAGGGACTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: STGLPGQHYWVLHGGILQTLAPW*LNRDSS Trigger: GGAGGAGTCCCTGTTCAGTCACCAAGGAGCCAGCGT...CTGCAGGATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR TCA 90 bp | TCCAAGCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTGACGGGCCTCGTGGAAGTTaGGCTGGTAGCGCCCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: SKPQRAGPPWRSVHHLPDGPRGS*AGSALR Trigger: GCGAAGGGCGCTACCAGCTCAACTTCCACGAGGCCC...GTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR CCA 90 bp | TCCAAGCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTGACTGGGGATGCCAGGGCTaGCTCATAGTGGTAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SKPQRAGPPWRSVHHLPDWGCQG*LIVVVA Trigger: TGCCACTACCACTATGAGCCAGCCCTGGCATCCCCA...GTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR TCA 90 bp | CCACAAGGGACAATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCATGGCTCCTTGGTGACTaGACAGGGACTCCTCCGTCG | + |
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Preference number: 4 (lower is better) Translates to: PQGTMVHLINTQPRKSGAWLLGD*TGTPPS Trigger: CGACGGAGGAGTCCCTGTTCAGTCACCAAGGAGCCA...TGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCATTGTCCCTTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032827.9 ENSMUST00000206092.2 |
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| CDS-3UTR TCA 90 bp | AGGGACAATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCAACGCTGGCTCCTTGGTaGCTGAACAGGGACTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RDNGPPDKHSAQEVRGRATLAPW*LNRDSS Trigger: GGAGGAGTCCCTGTTCAGTCACCAAGGAGCCAGCGT...TGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCATTGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032827.9 ENSMUST00000206092.2 |
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| CDS-3UTR CCA 90 bp | ATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCAGATGTACATAGCACCCTGCTCCTaGCAGGCCTGTTGGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: MVHLINTQPRKSGAEQMYIAPCS*QACWAS Trigger: CGAGGCCCAACAGGCCTGCCAGGAGCAGGGTGCTAT...GTACATCTGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032827.9 ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTCAGCCTCTGAGACCCTTTAGAAAGCACAGGAGCCCCTGTTTCATGAAATCCCCAAAGGAGCGGTaGCTCTGCCCGATGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GPQPLRPFRKHRSPCFMKSPKER*LCPMTT Trigger: GGTGGTCATCGGGCAGAGGCACCGCTCCTTTGGGGA...TTTCATGAAACAGGGGCTCCTGTGCTTTCTAAAGGGTCTCAGAGGCTGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | ATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCAGATGTACGCTACCATAGCACCCTaGTCCTGGCAGGCCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: MVHLINTQPRKSGAEQMYATIAP*SWQACW Trigger: CCAACAGGCCTGCCAGGAGCAGGGTGCTATGGTAGC...GTACATCTGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGCACAGGAGCCCCTGTTTCATGAAAGGCACCTCCTACTCTTCTCCTAAGGGTGCCTCTGCCCGATaGCCACCAGCACGTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKHRSPCFMKGTSYSSPKGASAR*PPARPV Trigger: AACAGGACGTGCTGGTGGTCATCGGGCAGAGGCACC...CTTAGGAGAAGAGTAGGAGGTGCCTTTCATGAAACAGGGGCTCCTGTGCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTCCTCAAGTAGGGATGGCAGCTGTACCAGAACATGGCAGAGCCTTTTTAGCGGGCACTTCCGTCTaGCAGCCAGCCAGCATCACA | + |
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Preference number: 4 (lower is better) Translates to: QFPQVGMAAVPEHGRAFLAGTSV*QPASIT Trigger: TGTGATGCTGGCTGGCTGGCAGACGGAAGTGCCCGC...TAAAAAGGCTCTGCCATGTTCTGGTACAGCTGCCATCCCTACTTGAGGAAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR CCA 90 bp | GGTCCTCAGCCTCTGAGACCCTTTAGAAAGCACAGGAGCCCCTGTTTCATGAAATGGGGATGCCAGGGCTaGCTCATAGTGGTAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GPQPLRPFRKHRSPCFMKWGCQG*LIVVVA Trigger: TGCCACTACCACTATGAGCCAGCCCTGGCATCCCCA...TTTCATGAAACAGGGGCTCCTGTGCTTTCTAAAGGGTCTCAGAGGCTGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| 3UTR CAA 72 bp | GCTAAGCAGGGGACATGGGGAGGAGACCTAGACTCTTaGGAACCAGGAGAAGAAGGGAAATTCTCCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: AKQGTWGGDLDS*EPGEEGKFSLA Trigger: GGCAAGGGAGAATTTCCCTTCTTCTCCTGGTTCCAAAGAGTCTAGGTCTCCTCCCCATGTCCCCTGCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR TCA 90 bp | AGGGACAATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCATGGGGCTCCATTCTCTaGCAACTTCCACCACTTAAC | + |
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Preference number: 4 (lower is better) Translates to: RDNGPPDKHSAQEVRGRAWGSIL*QLPPLN Trigger: GTTAAGTGGTGGAAGTTGTCAGAGAATGGAGCCCCA...TGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCATTGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | ATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCAGATGTACTCCAGCGAGACTTCCTaGTGCTTGTCCTGTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MVHLINTQPRKSGAEQMYSSETS*CLSCLS Trigger: ACTGAGACAGGACAAGCAGCAGGAAGTCTCGCTGGA...GTACATCTGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR CCA 90 bp | GTTGGGAAGTATAAAAACTATCCAAGCAATCCCCCAACCCACAAGGGACAATGGATAGCACCCTGCTCCTaGCAGGCCTGTTGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGKYKNYPSNPPTHKGQWIAPCS*QACWAS Trigger: CGAGGCCCAACAGGCCTGCCAGGAGCAGGGTGCTAT...CCATTGTCCCTTGTGGGTTGGGGGATTGCTTGGATAGTTTTTATACTTCCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032827.9 ENSMUST00000206092.2 |
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| CDS-3UTR TCA 90 bp | TGCAGAAATGTAAAGAGTCAACACTCAGCCTTTGCCACGTATAAGCTGAGGAAATGTGCACCATCTTCCTaGCAGGCCTCCCGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRNVKSQHSAFATYKLRKCAPSS*QASRAS Trigger: GGAGGCCCGGGAGGCCTGTCAGGAAGATGGTGCACA...TTTCCTCAGCTTATACGTGGCAAAGGCTGAGTGTTGACTCTTTACATTTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | ATGGGGAGGAGACCTAGACTCTTTGGAACCAGGAGAAGAAGGGAAATTCTCCCTCACCGTGGAGATCTGTaGACCATCTTCCTGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: MGRRPRLFGTRRRREILPHRGDL*TIFLTG Trigger: GCCTGTCAGGAAGATGGTGCACAGATCTCCACGGTG...AGGGAGAATTTCCCTTCTTCTCCTGGTTCCAAAGAGTCTAGGTCTCCTCCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | ATGTTTAAGTTGGGAAGTATAAAAACTATCCAAGCAATCCCCCAACCCACAAGGAAGGAGCGGTGCCTCTaGCCGATGACCACCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: MFKLGSIKTIQAIPQPTRKERCL*PMTTST Trigger: CGTGCTGGTGGTCATCGGGCAGAGGCACCGCTCCTT...CCTTGTGGGTTGGGGGATTGCTTGGATAGTTTTTATACTTCCCAACTTAAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR CCA 90 bp | ATGTTTAAGTTGGGAAGTATAAAAACTATCCAAGCAATCCCCCAACCCACAAGGGCGGGTGTGGGGGTCTaGGAAGCCAAAGGTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MFKLGSIKTIQAIPQPTRAGVGV*EAKGPY Trigger: GTACGGACCTTTGGCTTCCCAGACCCCCACACCCGC...CCTTGTGGGTTGGGGGATTGCTTGGATAGTTTTTATACTTCCCAACTTAAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR GCA 90 bp | ATGTTTAAGTTGGGAAGTATAAAAACTATCCAAGCAATCCCCCAACCCACAAGGTGCACGGAGGCATCCTaGAGCCAGCCTGCATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MFKLGSIKTIQAIPQPTRCTEAS*SQPALH Trigger: GTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCA...CCTTGTGGGTTGGGGGATTGCTTGGATAGTTTTTATACTTCCCAACTTAAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS TCA 90 bp | GAACTCGCCCTTGGTAGTCCCCAAAGGAGCGGTGCCTCTGCCCGATaGCCACCAGCACGTCCTGTTCTGGGGCTCCATTCTCTGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: ELALGSPQRSGASAR*PPARPVLGLHSLTT Trigger: AGTTGTCAGAGAATGGAGCCCCAGAACAGGACGTGCTGGTGGTCATCGGGCAGAGGCACCGCTCCTTTGGGGACTACCAAGGGCGAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGGGATCCCTAGTCCCTGAGACTGAAGGAGACAAAGGGTCAGATACAGGGGCCGGGGCAGCACTATaGGGTACTGCACGGAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLGSLVPETEGDKGSDTGAGAAL*GTARRH Trigger: ATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGC...CCCTGTATCTGACCCTTTGTCTCCTTCAGTCTCAGGGACTAGGGATCCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS TCA 90 bp | CATAGTGGTAGTGGCAGGGCAGGGTCACGCTGGCTCCTTGGTGACTaGACAGGGACTCCTCCGTCGTCTCCACCACTAACTTCACGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSGSGRAGSRWLLGD*TGTPPSSPPLTSRH Trigger: ATGGCGTGAAGTTAGTGGTGGAGACGACGGAGGAGTCCCTGTTCAGTCACCAAGGAGCCAGCGTGACCCTGCCCTGCCACTACCACTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS-3UTR CAA 90 bp | ACTTCCAAGCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTGGTCACGCTGGCTCCTaGGTGACTGAACAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: TSKPQRAGPPWRSVHHLPGHAGS*VTEQGL Trigger: GAGTCCCTGTTCAGTCACCAAGGAGCCAGCGTGACC...AGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR CAA 90 bp | TCCAAGCCGCAAAGAGCTGGCCCACCGTGGAGATCTGTGCACCATCTTCCTGACAAAACCACACATGTCTaGGGGATGCCAGGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKPQRAGPPWRSVHHLPDKTTHV*GMPGLA Trigger: AGCCAGCCCTGGCATCCCCAAGACATGTGTGGTTTT...GTCAGGAAGATGGTGCACAGATCTCCACGGTGGGCCAGCTCTTTGCGGCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS-3UTR CAA 90 bp | GTACAGCTAGCCACCCTGCTAATGCTGGACATAGCAGTAGACACCATAGCGGGTCTCCTGGCAGGCCTGTaGGGCCTCGTGGAAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQLATLLMLDIAVDTIAGLLAGL*GLVEVE Trigger: CTCAACTTCCACGAGGCCCAACAGGCCTGCCAGGAG...ACCCGCTATGGTGTCTACTGCTATGTCCAGCATTAGCAGGGTGGCTAGCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS TCA 90 bp | CTGCCCGATGACCACCAGCACGTCCTGTTCTGGGGCTCCATTCTCTaGCAACTTCCACCACTTAACACGCACATGTCTTGGGGATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPDDHQHVLFWGSIL*QLPPLNTHMSWGCQ Trigger: CTGGCATCCCCAAGACATGTGCGTGTTAAGTGGTGGAAGTTGTCAGAGAATGGAGCCCCAGAACAGGACGTGCTGGTGGTCATCGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS-3UTR CAA 90 bp | AGGGACAATGGTCCACCTGATAAACACTCAGCCCAGGAAGTCAGGGGCAGAGCACAGTTGAACTCGCCCTaGGTAGTCCCCAAAGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RDNGPPDKHSAQEVRGRAQLNSP*VVPKGA Trigger: CGCTCCTTTGGGGACTACCAAGGGCGAGTTCAACTG...TGCTCTGCCCCTGACTTCCTGGGCTGAGTGTTTATCAGGTGGACCATTGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTCAGCCTCTGAGACCCTTTAGAAAGCACAGGAGCCCCTGTTTCATGAAATGCAGCCAGCCTGCATaGCACCAGTCTAGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPQPLRPFRKHRSPCFMKCSQPA*HQSRPS Trigger: GGAAGGCCTAGACTGGTGCAATGCAGGCTGGCTGCA...TTTCATGAAACAGGGGCTCCTGTGCTTTCTAAAGGGTCTCAGAGGCTGAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS CCA 90 bp | GGCCTTCCCCGTAGCCATTTCCCAGGGTCCTGCCACTCAGATCATTaGAATAGTAGAAGCCATTGTAGAATGGAAGTCCCAAAACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLPRSHFPGSCHSDH*NSRSHCRMEVPKRR Trigger: CCTGCGTTTTGGGACTTCCATTCTACAATGGCTTCTACTATTCCAATGATCTGAGTGGCAGGACCCTGGGAAATGGCTACGGGGAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS-3UTR CAA 90 bp | TGCAGAAATGTAAAGAGTCAACACTCAGCCTTTGCCACGTATAAGCTGAGGAAACTCCTGGCAGGCCTGTaGGGCCTCGTGGAAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRNVKSQHSAFATYKLRKLLAGL*GLVEVE Trigger: CTCAACTTCCACGAGGCCCAACAGGCCTGCCAGGAG...TTTCCTCAGCTTATACGTGGCAAAGGCTGAGTGTTGACTCTTTACATTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS-3UTR CAA 90 bp | TGGAAAGGAAGGAAGGGAATCATAGCATCCTTTGTTGGCCAAATAAGGTACACAGGTCACGCTGGCTCCTaGGTGACTGAACAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: WKGRKGIIASFVGQIRYTGHAGS*VTEQGL Trigger: GAGTCCCTGTTCAGTCACCAAGGAGCCAGCGTGACC...TGTGTACCTTATTTGGCCAACAAAGGATGCTATGATTCCCTTCCTTCCTTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206092.2 |
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| CDS CCA 90 bp | GGTCCTGCCACTCAGATCATTGGAATAGTAGAAGCCATTGTAGAATaGAAGTCCCAAAACGCAGGGAAATGGCGAGAGAAGGACAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPATQIIGIVEAIVE*KSQNAGKWREKDKE Trigger: TTCCTTGTCCTTCTCTCGCCATTTCCCTGCGTTTTGGGACTTCCATTCTACAATGGCTTCTACTATTCCAATGATCTGAGTGGCAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 90 bp | CCCAGCACAGACCCAGGCCTCCACAGGGCTGCCGGGGCAGCACTATaGGGTACTGCACGGAGGCATCCTGCAGCCAGCCTGCATTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PSTDPGLHRAAGAAL*GTARRHPAASLHCT Trigger: GGTGCAATGCAGGCTGGCTGCAGGATGCCTCCGTGCAGTACCCAATAGTGCTGCCCCGGCAGCCCTGTGGAGGCCTGGGTCTGTGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205782.2 |
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| CDS TCA 72 bp | CCTGCTCCTGGCAGGCCTGTTGGGCCTCGTGGAAGTTaGGCTGGTAGCGCCCTTCGCGGGACTGGTAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PAPGRPVGPRGS*AGSALRGTGRE Trigger: TTCCCTACCAGTCCCGCGAAGGGCGCTACCAGCTCAACTTCCACGAGGCCCAACAGGCCTGCCAGGAGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 90 bp | CTGCTCAAAAGTGGCTACCATAGCACCCTGCTCCTGGCAGGCCTGTaGGGCCTCGTGGAAGTTGAGCTGGTAGCGCCCTTCGCGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLKSGYHSTLLLAGL*GLVEVELVAPFAGL Trigger: CAGTCCCGCGAAGGGCGCTACCAGCTCAACTTCCACGAGGCCCAACAGGCCTGCCAGGAGCAGGGTGCTATGGTAGCCACTTTTGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 72 bp | AGTGGCTACCATAGCACCCTGCTCCTGGCAGGCCTGTaGGGCCTCGTGGAAGTTGAGCTGGTAGCGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGYHSTLLLAGL*GLVEVELVAPF Trigger: GAAGGGCGCTACCAGCTCAACTTCCACGAGGCCCAACAGGCCTGCCAGGAGCAGGGTGCTATGGTAGCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS TCA 72 bp | CTTGGTAGTCCCCAAAGGAGCGGTGCCTCTGCCCGATaGCCACCAGCACGTCCTGTTCTGGGGCTCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGSPQRSGASAR*PPARPVLGLHS Trigger: AGAATGGAGCCCCAGAACAGGACGTGCTGGTGGTCATCGGGCAGAGGCACCGCTCCTTTGGGGACTACCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 72 bp | ATAGTGGTAGTGGCAGGGCAGGGTCACGCTGGCTCCTaGGTGACTGAACAGGGACTCCTCCGTCGTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IVVVAGQGHAGS*VTEQGLLRRLH Trigger: GTGGAGACGACGGAGGAGTCCCTGTTCAGTCACCAAGGAGCCAGCGTGACCCTGCCCTGCCACTACCACTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 90 bp | CAGCGAGACTTCCTGCTGCTTGTCCTGTCTCAGTTGAACTCGCCCTaGGTAGTCCCCAAAGGAGCGGTGCCTCTGCCCGATGACCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: QRDFLLLVLSQLNSP*VVPKGAVPLPDDHQ Trigger: CTGGTGGTCATCGGGCAGAGGCACCGCTCCTTTGGGGACTACCAAGGGCGAGTTCAACTGAGACAGGACAAGCAGCAGGAAGTCTCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 90 bp | GTCTCGAAGCTCCAGCGAGACTTCCTGCTGCTTGTCCTGTCTCAGTaGAACTCGCCCTTGGTAGTCCCCAAAGGAGCGGTGCCTCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSKLQRDFLLLVLSQ*NSPLVVPKGAVPLP Trigger: GGGCAGAGGCACCGCTCCTTTGGGGACTACCAAGGGCGAGTTCAACTGAGACAGGACAAGCAGCAGGAAGTCTCGCTGGAGCTTCGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CCA 72 bp | AGCTGCTCAAAAGTGGCTACCATAGCACCCTGCTCCTaGCAGGCCTGTTGGGCCTCGTGGAAGTTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSKVATIAPCS*QACWASWKLSW Trigger: CCAGCTCAACTTCCACGAGGCCCAACAGGCCTGCCAGGAGCAGGGTGCTATGGTAGCCACTTTTGAGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS GCA 72 bp | GGGACTGGTAGGGAAAAACCACACATGTCTTGGGGATaGCAGGGCTGGCTCATAGTGGTAGTGGCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTGREKPHMSWG*QGWLIVVVAGQ Trigger: CTGCCCTGCCACTACCACTATGAGCCAGCCCTGGCATCCCCAAGACATGTGTGGTTTTTCCCTACCAGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS GCA 72 bp | CGGAAAAGCTGCTCAAAAGTGGCTACCATAGCACCCTaGTCCTGGCAGGCCTGTTGGGCCTCGTGGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKSCSKVATIAP*SWQACWASWKL Trigger: CAACTTCCACGAGGCCCAACAGGCCTGCCAGGAGCAGGGTGCTATGGTAGCCACTTTTGAGCAGCTTTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CAA 72 bp | TTCCTGCTGCTTGTCCTGTCTCAGTTGAACTCGCCCTaGGTAGTCCCCAAAGGAGCGGTGCCTCTGCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: FLLLVLSQLNSP*VVPKGAVPLPD Trigger: ATCGGGCAGAGGCACCGCTCCTTTGGGGACTACCAAGGGCGAGTTCAACTGAGACAGGACAAGCAGCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS TCA 72 bp | ACTCCTCCGTCGTCTCCACCACTAACTTCACGCCATTaGATAGGCCTTCCCCGTAGCCATTTCCCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TPPSSPPLTSRH*IGLPRSHFPGS Trigger: GGACCCTGGGAAATGGCTACGGGGAAGGCCTATTCAATGGCGTGAAGTTAGTGGTGGAGACGACGGAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS GCA 72 bp | CAACTTCCACCACTTAACACGCACATGTCTTGGGGATaGCAGGGCTGGCTCATAGTGGTAGTGGCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLPPLNTHMSWG*QGWLIVVVAGQ Trigger: CTGCCCTGCCACTACCACTATGAGCCAGCCCTGGCATCCCCAAGACATGTGCGTGTTAAGTGGTGGAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CCA 72 bp | CTTCGCGGGACTGGTAGGGAAAAACCACACATGTCTTaGGGATGCCAGGGCTGGCTCATAGTGGTAGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRGTGREKPHMS*GCQGWLIVVVA Trigger: TGCCACTACCACTATGAGCCAGCCCTGGCATCCCCAAGACATGTGTGGTTTTTCCCTACCAGTCCCGCGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032827.9 |
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| CDS TCA 72 bp | GACCACCAGCACGTCCTGTTCTGGGGCTCCATTCTCTaGCAACTTCCACCACTTAACACGCACATGTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DHQHVLFWGSIL*QLPPLNTHMSW Trigger: CCAAGACATGTGCGTGTTAAGTGGTGGAAGTTGTCAGAGAATGGAGCCCCAGAACAGGACGTGCTGGTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CCA 72 bp | CGTAGCCATTTCCCAGGGTCCTGCCACTCAGATCATTaGAATAGTAGAAGCCATTGTAGAATGGAAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSHFPGSCHSDH*NSRSHCRMEVP Trigger: TGGGACTTCCATTCTACAATGGCTTCTACTATTCCAATGATCTGAGTGGCAGGACCCTGGGAAATGGCTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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| CDS CCA 72 bp | ACTCAGATCATTGGAATAGTAGAAGCCATTGTAGAATaGAAGTCCCAAAACGCAGGGAAATGGCGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TQIIGIVEAIVE*KSQNAGKWREK Trigger: CTTCTCTCGCCATTTCCCTGCGTTTTGGGACTTCCATTCTACAATGGCTTCTACTATTCCAATGATCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032827.9 ENSMUST00000205782.2 ENSMUST00000206092.2 |
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