Pregenerated sensors for HAO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027870Ensembl transcript IDs: ENSMUST00000029464.9
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACTTCTATTATaGATGGGACCCAAGAAGAACAGCATCACACACTATGTTGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PSVSIFEGRGLKLLL*MGPKKNSITHYVES Trigger: GCTTTCAACATAGTGTGTGATGCTGTTCTTCTTGGGTCCCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR CCA 90 bp | CTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACTTCTATTATGAATaGGACCCAAGAAGAACAGCATCACACACTATGTTGAAAGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: LSQFLRVEGLNFYYE*DPRRTASHTMLKAC Trigger: ACAAGCTTTCAACATAGTGTGTGATGCTGTTCTTCTTGGGTCCCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAATTGAGACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR CAA 90 bp | CCCTCTGGTAGCTTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTaGAGGGTAGAGGGCTTAAACTTCTATTATGAATGGGACCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PSGSFSLSFLHLSQF*RVEGLNFYYEWDPR Trigger: TCTTGGGTCCCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAAGCTACCAGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR-3UTR TCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTCTTAAACTTCTATTATaGATGGGACCCAAGAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: YFLQEGMNKIRITLSPFLLKLLL*MGPKKN Trigger: GTTCTTCTTGGGTCCCATTCATAATAGAAGTTTAAG...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCCATCACACACTATGTTaGAAGCTTGTCTTTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCHHTLC*KLVFLL Trigger: CAAGAGAAAGACAAGCTTTCAACATAGTGTGTGATG...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR CCA 72 bp | TTTTTGAGGGTAGAGGGCTTAAACTTCTATTATGAATaGGACCCAAGAAGAACAGCATCACACACTATGTTG | + |
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Preference number: 3 (lower is better) Translates to: FLRVEGLNFYYE*DPRRTASHTML Trigger: CAACATAGTGTGTGATGCTGTTCTTCTTGGGTCCCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR-3UTR CAA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTCACTATGTTGAAAGCTaGTCTTTCTCTTGTAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: YFLQEGMNKIRITLSPFLHYVES*SFSCRQ Trigger: TTGCCTACAAGAGAAAGACAAGCTTTCAACATAGTG...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR TCA 72 bp | TCAATTTTTGAGGGTAGAGGGCTTAAACTTCTATTATaGATGGGACCCAAGAAGAACAGCATCACACACTAT | + |
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Preference number: 3 (lower is better) Translates to: SIFEGRGLKLLL*MGPKKNSITHY Trigger: ATAGTGTGTGATGCTGTTCTTCTTGGGTCCCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAATTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR-3UTR CAA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCGCATCACACACTATGTaGAAAGCTTGTCTTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCASHTM*KACLSL Trigger: AAGAGAAAGACAAGCTTTCAACATAGTGTGTGATGC...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTCATCTCTCAGGTATCTaGGGCGGAGGCGGATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLHLSGI*GGGGFF Trigger: GAAGAATCCGCCTCCGCCCCAGATACCTGAGAGATG...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACAGCTGCCTCCCGCCATaGTTGGAAACAATGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNSCLPP*LETMMP Trigger: AGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCT...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR TCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTATGAAAGGCTGTGGGTaGGATGCAAATGGGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLMKGCG*DANGGI Trigger: AATGCCCCCATTTGCATCTCACCCACAGCCTTTCAT...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR TCA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACATTCCAGCAGGAAGATaGACTTGGCATAGACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNIPAGR*TWHRQG Trigger: CCCCTGTCTATGCCAAGTTCATCTTCCTGCTGGAAT...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR TCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTCTTCAATTTTCCCATTaGCGGCAGCCACCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLLQFSH*RQPPLL Trigger: GAGAAGTGGTGGCTGCCGTCAATGGGAAAATTGAAG...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCGGGGCATTGATCTCCTaGCCTTGGATTGTGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCGALIS*PWIVVL Trigger: CAGGACCACAATCCAAGGGCAGGAGATCAATGCCCC...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCGGAACCTCATCAAGCTaGCTCCCGCCATGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCGTSSS*LPPWLE Trigger: TTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCC...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTCCTGCCCTTGGATTGTaGTCCTGGTGTCTATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLPALGL*SWCLSL Trigger: CAAAGATAGACACCAGGACCACAATCCAAGGGCAGG...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR TCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCTGCAAATGGGGGCATTaGTCTCCTGCCCTTGGATTG | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCCKWGH*SPALGL Trigger: CAATCCAAGGGCAGGAGATCAATGCCCCCATTTGCA...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR TCA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACAACCGAGTCATACTCTaGAGCAAGGGGAGATCATTC | + |
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Preference number: 4 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNNRVIL*SKGRSF Trigger: GAATGATCTCCCCTTGCTTCAGAGTATGACTCGGTT...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACGAGGTCTTAGACAGCTaGTTTTGTGCTTGTGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNEVLDS*FCACAL Trigger: TAAGGCACAAGCACAAAAGCAGCTGTCTAAGACCTC...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCTGTTCCCTCGCCTATTaGCAAGTACAGGTGCATCTA | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCCSLAY*QVQVHL Trigger: TAGATGCACCTGTACTTGGCAATAGGCGAGGGAACA...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACCTTGGATTGTGGTCCTaGTGTCTATCTTTGACACAT | + |
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Preference number: 4 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNLGLWS*CLSLTH Trigger: ATGTGTCAAAGATAGACACCAGGACCACAATCCAAG...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCTTGAATGAAAGGCTGTaGGTGAGATGCAAATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCLNERL*VRCKWG Trigger: CCCCCATTTGCATCTCACCCACAGCCTTTCATTCAA...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTAAGGCCCCAAATGATTaGTCTCCCAAGAAAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLKAPND*SPKKNA Trigger: TGCATTTTTCTTGGGAGACCAATCATTTGGGGCCTT...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR TCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCCCTGGTGTCTATCTTTaGCACATCTCTCAGGTATCT | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCPGVYL*HISQVS Trigger: AGATACCTGAGAGATGTGTCAAAGATAGACACCAGG...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTTTGTGCCTTAAAGTCTaGCAAACACAGCAAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLLCLKV*QTQQRH Trigger: ATGTCTTTGCTGTGTTTGGCAGACTTTAAGGCACAA...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCAGACAGCTGCTTTTGTaGTTGTGCCTTAAAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCRQLLL*LCLKVC Trigger: GCAGACTTTAAGGCACAAGCACAAAAGCAGCTGTCT...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTTGTCATTGTAGGTTATaGCATCATCAGCTTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: YFLQEGMNKIRITLSPFLCHCRL*HHQLLL Trigger: AAGGAGAAGCTGATGATGGCATAACCTACAATGACA...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCCTTCAGCTTTATGTTTaGCTCCAAATCCAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCLQLYV*LQIQQA Trigger: AGCCTGCTGGATTTGGAGGCAAACATAAAGCTGAAG...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| 3UTR CAA 72 bp | AGCTTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTaGAGGGTAGAGGGCTTAAACTTCTATTATGAATGG | + |
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Preference number: 4 (lower is better) Translates to: SFSLSFLHLSQF*RVEGLNFYYEW Trigger: CCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCGATTCTTCTAAATGCTaGCAAGTTGTCATTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCDSSKC*QVVIVG Trigger: ACCTACAATGACAACTTGGCAGCATTTAGAAGAATC...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CCA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCAGGGCCATACAAGTGTaGAGTTCTTCTTTTAGAATA | + |
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Preference number: 4 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCRAIQV*SSSFRI Trigger: TATTCTAAAAGAAGAACTCCACACTTGTATGGCCCT...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CCA 90 bp | CAAGGCTTCTATCCTCTGAACCATCTGCTTGTTGATGTCCCAGTCTaGCTGCACATAAAGTTGGAACCAATGGAGGCCTCCAGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QGFYPLNHLLVDVPV*LHIKLEPMEASRGS Trigger: GCTGCCCCTGGAGGCCTCCATTGGTTCCAACTTTATGTGCAGCCAGACTGGGACATCAACAAGCAGATGGTTCAGAGGATAGAAGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 90 bp | AGACTTGCTCTCTCCAGGGGATCGGAGATCCTTCAGCTTTATGTTTaGCTCCAAATCCAGCAGGCTTCTCTTGTTCCCTCGCCTATTGCC | + |
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Preference number: 5 (lower is better) Translates to: RLALSRGSEILQLYV*LQIQQASLVPSPIA Trigger: GGCAATAGGCGAGGGAACAAGAGAAGCCTGCTGGATTTGGAGGCAAACATAAAGCTGAAGGATCTCCGATCCCCTGGAGAGAGCAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 90 bp | GCAGCTTTAGCTGTGCTCTTTTCTCCATCTGCCCAGGCAATTGAATaGAAGGCTGTGGGTGAGATGCAAATGGGGGCATTGATCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AALAVLFSPSAQAIE*KAVGEMQMGALISC Trigger: GCAGGAGATCAATGCCCCCATTTGCATCTCACCCACAGCCTTTCATTCAATTGCCTGGGCAGATGGAGAAAAGAGCACAGCTAAAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 90 bp | ACCACTTCTCTCAGAGCATCAATAGATGCAGGAACCTCATCAAGCTaGCTCCCGCCATGGTTGGAAACAATGATGCCTCGGATGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TTSLRASIDAGTSSS*LPPWLETMMPRMLC Trigger: GCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCCTGCATCTATTGATGCTCTGAGAGAAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 90 bp | ATGCAGGAACCTCATCAAGCTGCCTCCCGCCATGGTTGGAAACAATaGTGCCTCGGATGTTGTGCTTCACTGCTAATTCTGCATCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: MQEPHQAASRHGWKQ*CLGCCASLLILHPL Trigger: AAGAGGATGCAGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CCA 90 bp | AAGGCTGTGGGTGAGATGCAAATGGGGGCATTGATCTCCTGCCCTTaGATTGTGGTCCTGGTGTCTATCTTTGACACATCTCTCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: KAVGEMQMGALISCP*IVVLVSIFDTSLRY Trigger: ATACCTGAGAGATGTGTCAAAGATAGACACCAGGACCACAATCCAAGGGCAGGAGATCAATGCCCCCATTTGCATCTCACCCACAGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 90 bp | AGGCAATTGAATGAAAGGCTGTGGGTGAGATGCAAATGGGGGCATTaGTCTCCTGCCCTTGGATTGTGGTCCTGGTGTCTATCTTTGACA | + |
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Preference number: 5 (lower is better) Translates to: RQLNERLWVRCKWGH*SPALGLWSWCLSLT Trigger: TGTCAAAGATAGACACCAGGACCACAATCCAAGGGCAGGAGATCAATGCCCCCATTTGCATCTCACCCACAGCCTTTCATTCAATTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 90 bp | ATCCAGCAGGCTTCTCTTGTTCCCTCGCCTATTGCCAAGTACAGGTaGATCTACAGTGACCACCAAAGCTTTGAAACCCAAGGCTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: IQQASLVPSPIAKYR*IYSDHQSFETQGFY Trigger: ATAGAAGCCTTGGGTTTCAAAGCTTTGGTGGTCACTGTAGATGCACCTGTACTTGGCAATAGGCGAGGGAACAAGAGAAGCCTGCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CCA 90 bp | AGAGCATCAATAGATGCAGGAACCTCATCAAGCTGCCTCCCGCCATaGTTGGAAACAATGATGCCTCGGATGTTGTGCTTCACTGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: RASIDAGTSSSCLPP*LETMMPRMLCFTAN Trigger: ATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCCTGCATCTATTGATGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 90 bp | AGCTGCCTCCCGCCATGGTTGGAAACAATGATGCCTCGGATGTTGTaGTTCACTGCTAATTCTGCATCCTCTTTTGTCAAAATCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SCLPPWLETMMPRML*FTANSASSFVKIPL Trigger: CAAAGGGATTTTGACAAAAGAGGATGCAGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACTCCAGCAGGCTTCTCTaGTTCCCTCGCCTATTGCCA | + |
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Preference number: 5 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNSSRLL*FPRLLP Trigger: TGGCAATAGGCGAGGGAACAAGAGAAGCCTGCTGGA...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 90 bp | TCATCAGCTTCTCCTTCAATAAAATCCCAGGAGGTCTTAGACAGCTaGTTTTGTGCTTGTGCCTTAAAGTCTGCCAAACACAGCAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSASPSIKSQEVLDS*FCACALKSAKHSKD Trigger: GTCTTTGCTGTGTTTGGCAGACTTTAAGGCACAAGCACAAAAGCAGCTGTCTAAGACCTCCTGGGATTTTATTGAAGGAGAAGCTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTATTGATCTCCTGCCCTaGGATTGTGGTCCTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: YFLQEGMNKIRITLSPFLIDLLP*DCGPGV Trigger: GACACCAGGACCACAATCCAAGGGCAGGAGATCAAT...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACTGGCTGCACATAAAGTaGGAACCAATGGAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNWLHIK*EPMEAS Trigger: GGAGGCCTCCATTGGTTCCAACTTTATGTGCAGCCA...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCTGCCTCCCGCCATGGTaGGAAACAATGATGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCCLPPW*ETMMPR Trigger: CCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCA...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTCCTTCAGCTTTATGTTaGCCTCCAAATCCAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: YFLQEGMNKIRITLSPFLPSALC*PPNPAG Trigger: GCCTGCTGGATTTGGAGGCAAACATAAAGCTGAAGG...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | ATTTCTGTAACATGCTGTGACAGAAACTTGAATAATTCACATGCTGTACTATGCCATCTGCCCAGGCAATaGAATGAAAGGCTGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: ISVTCCDRNLNNSHAVLCHLPRQ*NERLWV Trigger: CACCCACAGCCTTTCATTCAATTGCCTGGGCAGATG...GCATAGTACAGCATGTGAATTATTCAAGTTTCTGTCACAGCATGTTACAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTGTGACCACCAAAGCTTaGAAACCCAAGGCTTCTATC | + |
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Preference number: 5 (lower is better) Translates to: YFLQEGMNKIRITLSPFLVTTKA*KPKASI Trigger: GATAGAAGCCTTGGGTTTCAAAGCTTTGGTGGTCAC...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACACTTCAATTTTCCCATaGACGGCAGCCACCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNTSIFP*TAATTS Trigger: AGAAGTGGTGGCTGCCGTCAATGGGAAAATTGAAGT...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TTTAGCCTATCTTTTCTCCATCTGTCTCAATTTTTGAGGGTAGAGGGCTTAAACCTTAGACAGCTGCTTTaGTGCTTGTGCCTTAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: FSLSFLHLSQFLRVEGLNLRQLL*CLCLKV Trigger: GACTTTAAGGCACAAGCACAAAAGCAGCTGTCTAAG...GTTTAAGCCCTCTACCCTCAAAAATTGAGACAGATGGAGAAAAGATAGGCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS-3UTR CAA 90 bp | TATTTCTTGCAGGAGGGAATGAATAAAATCAGGATAACCCTGTCCCCATTTCTTTTTGTCAAAATCCCTTaGAGGATAATGGGCAACCGA | + |
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Preference number: 5 (lower is better) Translates to: YFLQEGMNKIRITLSPFLFVKIP*RIMGNR Trigger: TCGGTTGCCCATTATCCTCAAAGGGATTTTGACAAA...AAGAAATGGGGACAGGGTTATCCTGATTTTATTCATTCCCTCCTGCAAGAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 72 bp | CTCCTGCCCTTGGATTGTGGTCCTGGTGTCTATCTTTaGCACATCTCTCAGGTATCTGGGGCGGAGGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLPLDCGPGVYL*HISQVSGAEAD Trigger: ATCCGCCTCCGCCCCAGATACCTGAGAGATGTGTCAAAGATAGACACCAGGACCACAATCCAAGGGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | CTGCTTGTTGATGTCCCAGTCTGGCTGCACATAAAGTaGGAACCAATGGAGGCCTCCAGGGGCAGCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LLVDVPVWLHIK*EPMEASRGSSN Trigger: GTTGCTGCTGCCCCTGGAGGCCTCCATTGGTTCCAACTTTATGTGCAGCCAGACTGGGACATCAACAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 72 bp | GCTGTGGGTGAGATGCAAATGGGGGCATTGATCTCCTaGCCTTGGATTGTGGTCCTGGTGTCTATCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: AVGEMQMGALIS*PWIVVLVSIFD Trigger: GTCAAAGATAGACACCAGGACCACAATCCAAGGGCAGGAGATCAATGCCCCCATTTGCATCTCACCCACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 72 bp | CTCTCCAGGGGATCGGAGATCCTTCAGCTTTATGTTTaGCTCCAAATCCAGCAGGCTTCTCTTGTTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LSRGSEILQLYV*LQIQQASLVPS Trigger: CGAGGGAACAAGAGAAGCCTGCTGGATTTGGAGGCAAACATAAAGCTGAAGGATCTCCGATCCCCTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CCA 72 bp | ACCATCTTCACCCTTGCAGGCAAGGCCCCAAATGATTaGTCTCCCAAGAAAAATGCACCTAGCTCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TIFTLAGKAPND*SPKKNAPSSKG Trigger: GCCCTTGGAGCTAGGTGCATTTTTCTTGGGAGACCAATCATTTGGGGCCTTGCCTGCAAGGGTGAAGATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | GAACTTGGCATAGACAGGGGAGTAGGAAGTCCAGACTaGCTCTCTCCAGGGGATCGGAGATCCTTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ELGIDRGVGSPD*LSPGDRRSFSF Trigger: AAAGCTGAAGGATCTCCGATCCCCTGGAGAGAGCAAGTCTGGACTTCCTACTCCCCTGTCTATGCCAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | GATGCAGGAACCTCATCAAGCTGCCTCCCGCCATGGTaGGAAACAATGATGCCTCGGATGTTGTGCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: DAGTSSSCLPPW*ETMMPRMLCFT Trigger: AGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCCTGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | CACCTAGCTCCAAGGGCTAGTGCCTTCAACACATCATaGCCGGTTCGAACCCCACCATCCATGTACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: HLAPRASAFNTS*PVRTPPSMYTS Trigger: TGAAGTGTACATGGATGGTGGGGTTCGAACCGGCAATGATGTGTTGAAGGCACTAGCCCTTGGAGCTAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 90 bp | CTGAACCATCTGCTTGTTGATGTCCCAGTCTGGCTGCACATAAAGTaGGAACCAATGGAGGCCTCCAGGGGCAGCAGCAACAATGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNHLLVDVPVWLHIK*EPMEASRGSSNNVF Trigger: GAAGACATTGTTGCTGCTGCCCCTGGAGGCCTCCATTGGTTCCAACTTTATGTGCAGCCAGACTGGGACATCAACAAGCAGATGGTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 72 bp | AATGAAAGGCTGTGGGTGAGATGCAAATGGGGGCATTaGTCTCCTGCCCTTGGATTGTGGTCCTGGTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: NERLWVRCKWGH*SPALGLWSWCL Trigger: TAGACACCAGGACCACAATCCAAGGGCAGGAGATCAATGCCCCCATTTGCATCTCACCCACAGCCTTTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 72 bp | GCTGTGCTCTTTTCTCCATCTGCCCAGGCAATTGAATaGAAGGCTGTGGGTGAGATGCAAATGGGGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: AVLFSPSAQAIE*KAVGEMQMGAL Trigger: CAATGCCCCCATTTGCATCTCACCCACAGCCTTTCATTCAATTGCCTGGGCAGATGGAGAAAAGAGCACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 72 bp | CCTCATCAAGCTGCCTCCCGCCATGGTTGGAAACAATaGTGCCTCGGATGTTGTGCTTCACTGCTAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: PHQAASRHGWKQ*CLGCCASLLIL Trigger: CAGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CCA 72 bp | ATAGATGCAGGAACCTCATCAAGCTGCCTCCCGCCATaGTTGGAAACAATGATGCCTCGGATGTTGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IDAGTSSSCLPP*LETMMPRMLCF Trigger: GAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCCTGCATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | TCTCTCCAGGGGATCGGAGATCCTTCAGCTTTATGTTaGCCTCCAAATCCAGCAGGCTTCTCTTGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLQGIGDPSALC*PPNPAGFSCSL Trigger: GAGGGAACAAGAGAAGCCTGCTGGATTTGGAGGCAAACATAAAGCTGAAGGATCTCCGATCCCCTGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 90 bp | TTGCCGGTTCGAACCCCACCATCCATGTACACTTCAATTTTCCCATaGACGGCAGCCACCACTTCTCTCAGAGCATCAATAGATGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LPVRTPPSMYTSIFP*TAATTSLRASIDAG Trigger: TCCTGCATCTATTGATGCTCTGAGAGAAGTGGTGGCTGCCGTCAATGGGAAAATTGAAGTGTACATGGATGGTGGGGTTCGAACCGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS TCA 72 bp | ACCACCAAAGCTTTGAAACCCAAGGCTTCTATCCTCTaGACCATCTGCTTGTTGATGTCCCAGTCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TTKALKPKASIL*TICLLMSQSGC Trigger: GCAGCCAGACTGGGACATCAACAAGCAGATGGTTCAGAGGATAGAAGCCTTGGGTTTCAAAGCTTTGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 72 bp | CAGGTATCTGGGGCGGAGGCGGATTCTTCTAAATGCTaGCAAGTTGTCATTGTAGGTTATGCCATCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: QVSGAEADSSKC*QVVIVGYAIIS Trigger: GCTGATGATGGCATAACCTACAATGACAACTTGGCAGCATTTAGAAGAATCCGCCTCCGCCCCAGATACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CCA 72 bp | GGTGAGATGCAAATGGGGGCATTGATCTCCTGCCCTTaGATTGTGGTCCTGGTGTCTATCTTTGACACATCT | + |
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Preference number: 6 (lower is better) Translates to: GEMQMGALISCP*IVVLVSIFDTS Trigger: AGATGTGTCAAAGATAGACACCAGGACCACAATCCAAGGGCAGGAGATCAATGCCCCCATTTGCATCTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 90 bp | GCATCAATAGATGCAGGAACCTCATCAAGCTGCCTCCCGCCATGGTaGGAAACAATGATGCCTCGGATGTTGTGCTTCACTGCTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: ASIDAGTSSSCLPPW*ETMMPRMLCFTANS Trigger: AGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGATGAGGTTCCTGCATCTATTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | AGCTTTATGTTTGCCTCCAAATCCAGCAGGCTTCTCTaGTTCCCTCGCCTATTGCCAAGTACAGGTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SFMFASKSSRLL*FPRLLPSTGAS Trigger: AGATGCACCTGTACTTGGCAATAGGCGAGGGAACAAGAGAAGCCTGCTGGATTTGGAGGCAAACATAAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | CTCCCGCCATGGTTGGAAACAATGATGCCTCGGATGTaGTGCTTCACTGCTAATTCTGCATCCTCTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LPPWLETMMPRM*CFTANSASSFV Trigger: GACAAAAGAGGATGCAGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | CGAACCCCACCATCCATGTACACTTCAATTTTCCCATaGACGGCAGCCACCACTTCTCTCAGAGCATCAATA | + |
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Preference number: 6 (lower is better) Translates to: RTPPSMYTSIFP*TAATTSLRASI Trigger: TATTGATGCTCTGAGAGAAGTGGTGGCTGCCGTCAATGGGAAAATTGAAGTGTACATGGATGGTGGGGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 90 bp | ATGTTTGCCTCCAAATCCAGCAGGCTTCTCTTGTTCCCTCGCCTATaGCCAAGTACAGGTGCATCTACAGTGACCACCAAAGCTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: MFASKSSRLLLFPRL*PSTGASTVTTKALK Trigger: TTTCAAAGCTTTGGTGGTCACTGTAGATGCACCTGTACTTGGCAATAGGCGAGGGAACAAGAGAAGCCTGCTGGATTTGGAGGCAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 90 bp | TCAAGCTGCCTCCCGCCATGGTTGGAAACAATGATGCCTCGGATGTaGTGCTTCACTGCTAATTCTGCATCCTCTTTTGTCAAAATCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSCLPPWLETMMPRM*CFTANSASSFVKIP Trigger: AGGGATTTTGACAAAAGAGGATGCAGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGGGAGGCAGCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS GCA 72 bp | CCGCCATGGTTGGAAACAATGATGCCTCGGATGTTGTaGTTCACTGCTAATTCTGCATCCTCTTTTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PPWLETMMPRML*FTANSASSFVK Trigger: TTTGACAAAAGAGGATGCAGAATTAGCAGTGAAGCACAACATCCGAGGCATCATTGTTTCCAACCATGGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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| CDS CAA 72 bp | TTCAATAAAATCCCAGGAGGTCTTAGACAGCTGCTTTaGTGCTTGTGCCTTAAAGTCTGCCAAACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FNKIPGGLRQLL*CLCLKVCQTQQ Trigger: TTGCTGTGTTTGGCAGACTTTAAGGCACAAGCACAAAAGCAGCTGTCTAAGACCTCCTGGGATTTTATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029464.9 |
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