RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020017

Ensembl transcript IDs: ENSMUST00000016031.14, ENSMUST00000129421.8

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTaGCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTCACAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: VPFSTSRVKAATISA*RAMALARSRASQPR
Trigger: CCTGGGCTGTGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 90 bp GCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCG +
Preference number: 1 (lower is better)
Translates to: ALLRSAPGRTPSPAE*LFSGGAETLYPGRP
Trigger: CGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 90 bp CACGGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTaGTGCCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAG +
Preference number: 1 (lower is better)
Translates to: HGEVGQHGCRYRRLW*CPSAPPGSRQPQYQ
Trigger: CTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 90 bp TCCAGCGGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCAATGGCTAGCACTTGTTCCACGTGC +
Preference number: 1 (lower is better)
Translates to: SSGVVVFRGRRNSIP*QAARSSMASTCSTC
Trigger: GCACGTGGAACAAGTGCTAGCCATTGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 90 bp ACCACACCGTGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTaGACACGATCGCAGAACCTGTGGCTTTCTGCGATTTCTGATGGG +
Preference number: 1 (lower is better)
Translates to: TTPWTCGQQRKVYAS*TRSQNLWLSAISDG
Trigger: CCCATCAGAAATCGCAGAAAGCCACAGGTTCTGCGATCGTGTTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCACGGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 90 bp AGGAAGGCAGGGCTGGACAGGAGCCCAGCACTTCCAAAACAGGAGTaGGAGCAGGAACTTGCTGGAGTCATTGCCCACTTGGGTGCAAGA +
Preference number: 1 (lower is better)
Translates to: RKAGLDRSPALPKQE*EQELAGVIAHLGAR
Trigger: TCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCAGCCCTGCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 90 bp GGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTaGCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTT +
Preference number: 1 (lower is better)
Translates to: GEVGQHGCRYRRLWW*PSAPPGSRQPQYQL
Trigger: AAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 90 bp TCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTTGCCCACGGTaGGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: SRRDRNRKATSICPR*GRTAWMSVSKALVV
Trigger: CACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 90 bp TTTGGTCAAGAAGCAACCTGTGTGCTGCCTCAATGTCCGGGGCCATaGAGCGATCTTTTATCCAGGGCCTTACTACGGAGCGCACCAGGT +
Preference number: 1 (lower is better)
Translates to: FGQEATCVLPQCPGP*SDLLSRALLRSAPG
Trigger: ACCTGGTGCGCTCCGTAGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATTGAGGCAGCACACAGGTTGCTTCTTGACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 90 bp CTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTaGTGTGCCTGTCCTCGAGGAAGCCCGTTAAAGATCGTCAGACTC +
Preference number: 1 (lower is better)
Translates to: LSPSTHQCCAKLRPI*CACPRGSPLKIVRL
Trigger: GAGTCTGACGATCTTTAACGGGCTTCCTCGAGGACAGGCACATCAGATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 90 bp GTATACAAAACCGAGGGATGGAATAATGTCAAAGGAAGGCAGGGCTaGACAGGAGCCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAAC +
Preference number: 1 (lower is better)
Translates to: VYKTEGWNNVKGRQG*TGAQHFQNRSESRN
Trigger: GTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCAGCCCTGCCTTCCTTTGACATTATTCCATCCCTCGGTTTTGTATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 90 bp TCTGGATTCCGGAATGTGCTCCATTCTGTATTTCTCGATGTACGGTaGGGCAACCTCCCAAACCTTTTGGTCAAGAAGCAACCTGTGTGC +
Preference number: 1 (lower is better)
Translates to: SGFRNVLHSVFLDVR*GNLPNLLVKKQPVC
Trigger: GCACACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 90 bp TCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTaGTCCATTCTGTATTTCTCGATGTACGGTGCGGCAACCTCCCAA +
Preference number: 1 (lower is better)
Translates to: SSENAVGESGLDSGM*SILYFSMYGAATSQ
Trigger: TTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 90 bp GCTGAGGGAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACCAATGGCCAAATAGTCCAGGGCCAT +
Preference number: 1 (lower is better)
Translates to: AEGRITQPFDSSFTN*RKFMDTNGQIVQGH
Trigger: ATGGCCCTGGACTATTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTCCCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 90 bp CAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTaGGTTCAGCCACTGCATTGCTGCCATGGCCTATCCAGAGTATGT +
Preference number: 1 (lower is better)
Translates to: QYSSNHSNKKTRSGL*VQPLHCCHGLSRVC
Trigger: ACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 90 bp TCTTTCGGAGAGATTCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTaGATTCCGGAATGTGCTCCATTCTGTATTTCTCGATGTACGGTG +
Preference number: 1 (lower is better)
Translates to: SFGEILVKTLLEKAV*IPECAPFCISRCTV
Trigger: CACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTCTCCGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 90 bp GAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTaGAATGGCTTCTCAGAGAAGCAGAGAAGCAAATATGAGGTGTTA +
Preference number: 1 (lower is better)
Translates to: EVLANRNPFLHSCFG*NGFSEKQRSKYEVL
Trigger: TAACACCTCATATTTGCTTCTCTGCTTCTCTGAGAAGCCATTCCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR TCA 90 bp TCCAGACTCTTCTCTGTGACTCAGGAGAGACTTAAGAACAAATTCTaGCTTGAAACGTATTTGTCAGATTATGGTATTAGTACAATTAGT +
Preference number: 1 (lower is better)
Translates to: SRLFSVTQERLKNKF*LETYLSDYGISTIS
Trigger: ACTAATTGTACTAATACCATAATCTGACAAATACGTTTCAAGTCAGAATTTGTTCTTAAGTCTCTCCTGAGTCACAGAGAAGAGTCTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 90 bp GGTGCCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTaGCCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTCACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GALQHLQGQGSHNIS*PGNGAGSLQGFTAQ
Trigger: CTGGGCTGTGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR GCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCGCACTGGGGCTCAGGTaGCCACCACCACTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PETLSPSTHQCCAKLRPIALGLR*PPPLLP
Trigger: AGGCAGGAGTGGTGGTGGGCACCTGAGCCCCAGTGC...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 90 bp TTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTaGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGA +
Preference number: 2 (lower is better)
Translates to: LLRSAPGRTPSPAEW*FSGGAETLYPGRPR
Trigger: TCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp ATCCAGGGCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGACACCTCTCAGGACTaGGTGGTTTCCCAACACCTG +
Preference number: 2 (lower is better)
Translates to: IQGLTTERTRSYTFSSGVDTSQD*VVSQHL
Trigger: CAGGTGTTGGGAAACCACTCAGTCCTGAGAGGTGTC...CACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGCCCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp CGTTCACCACACCGTGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTGAAAGCCCCAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: RSPHRGPVDSSVRCTRPESPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTGGGGCT...TTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCACGGTGTGGTGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCATTTATGCAGCCCCTaGACTAGCTCCCCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAAHLCSP*TSSPCS
Trigger: GGAGCAGGGGGAGCTAGTTCAGGGGCTGCATAAATG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp GGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGAGAAGCAAGATGAGAGAGTaGGGCAAGGTCTCCGCTGGC +
Preference number: 2 (lower is better)
Translates to: GVVVFRGRRNSIPWQAARSKMRE*GKVSAG
Trigger: GCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCT...TCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp ATGGGTGGTGATCCGAGTCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTTCAGCTTGCCGGGCAATaGCGCTGGCTCGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: MGGDPSPGGTGIGKQLQFQLAGQ*RWLAPG
Trigger: CCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTG...AAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGACTCGGATCACCACCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACTACGGAGCGCACCAGGGCTGCTGCGGTGCAGTaGGCTATCATGAACCCAGAA +
Preference number: 2 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRAAAVQ*AIMNPE
Trigger: TTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGC...CCTGGTGCGCTCCGTAGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 90 bp GTGATCCGAGTCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTaGCCCACGGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGC +
Preference number: 2 (lower is better)
Translates to: VIRVQEGPESESNFN*PTVRSDSMDVGIEG
Trigger: GCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGACTCGGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGGGCTGGCTGAGCAGTaGGCCCCCAGGAGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTGLAEQ*APRSCL
Trigger: CAGGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR TCA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGACCCCTGTAGTCTGTaGCCAGCTCGGGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHDPCSL*PARGAG
Trigger: GCCAGCACCCCGAGCTGGTCACAGACTACAGGGGTC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACTACGGAGCGCACCAGGAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: SGAMKRSFIQGLTTERTRRNSIP*QAARSS
Trigger: TGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCT...CCTGGTGCGCTCCGTAGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATAGGCAGGCAGTGGGTTaGCCCCCATCCCCACCCTCA +
Preference number: 2 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHRQAVG*PPSPPS
Trigger: TGAGGGTGGGGATGGGGGCCAACCCACTGCCTGCCT...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR TCA 90 bp CAGGCCCATCTGATGTGCCTGTCCTCGAGGAAGCCCGTTAAAGATCGTCAGACTTCTTTCCTTCTCCGATaGGCCCCAGAGCAAGATGAG +
Preference number: 2 (lower is better)
Translates to: QAHLMCLSSRKPVKDRQTSFLLR*APEQDE
Trigger: CTCATCTTGCTCTGGGGCTCATCGGAGAAGGAAAGA...AGTCTGACGATCTTTAACGGGCTTCCTCGAGGACAGGCACATCAGATGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp CTCCCCTCGACTGGCAAAGACCATAGGATTGTCTGTGGCGCTGTTCAGTTCTGTATTTCTGATGGGTGGTaGTCCGAGTCCAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: LPSTGKDHRIVCGAVQFCISDGW*SESRRD
Trigger: GTCCCTCCTGGACTCGGATCACCACCCATCAGAAAT...ACAGAACTGAACAGCGCCACAGACAATCCTATGGTCTTTGCCAGTCGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp GGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGAGAATGGAAGTTTCCTCCTaGAATTGTCTCCCCTCGACT +
Preference number: 2 (lower is better)
Translates to: GVVVFRGRRNSIPWQAARMEVSS*NCLPST
Trigger: AGTCGAGGGGAGACAATTTCAGGAGGAAACTTCCAT...TCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp CGTTCACCACACCGTGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTGAACGATCGCAGAACCTGTaGCTTTCTGCGATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: RSPHRGPVDSSVRCTRPERSQNL*LSAISD
Trigger: ATCAGAAATCGCAGAAAGCCACAGGTTCTGCGATCG...TTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCACGGTGTGGTGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR GCA 90 bp GTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGAGAAGCTCAAACATATTTAGCATCTaGCCAGCCACTCTTCGGGGA +
Preference number: 2 (lower is better)
Translates to: VVFRGRRNSIPWQAARSSNIFSI*PATLRG
Trigger: TCCCCGAAGAGTGGCTGGGCAGATGCTAAATATGTT...TGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR GCA 90 bp AAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATTTGAGGGCTTTCCTGGCTaGCCATCCTCCCATGGAGAC +
Preference number: 2 (lower is better)
Translates to: KRCWRKRSGFRNVLHSVFEGFPG*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCCAGGAAAGCCCTC...AAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 90 bp CGCTCCAGGGCTTCACAGCCCAGGGAAGTGATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCTTTTGGTTTCAAGACAATTGGTTTC +
Preference number: 2 (lower is better)
Translates to: RSRASQPREVIICVP*MSARPSFGFKTIGF
Trigger: GAAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCACTCATCAATGGGACACAGATGATCACTTCCCTGGGCTGTGAAGCCCTGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp TTCGGAGAGATTCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAACCTCCCATGGAGACGTaGTCTTCTGTAGCAGCACTG +
Preference number: 2 (lower is better)
Translates to: FGEILVKTLLEKAVWIPEPPMET*SSVAAL
Trigger: CAGTGCTGCTACAGAAGACCACGTCTCCATGGGAGG...TTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTCTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 90 bp TGGACAGGAGCCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTaGCTGGAGTCATTGCCCACTTGGGTGCAAGAATACATAAGTTGT +
Preference number: 2 (lower is better)
Translates to: WTGAQHFQNRSESRN*LESLPTWVQEYISC
Trigger: ACAACTTATGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR TCA 90 bp TTGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATTTCTCGATGTTCAATTTGCCCACGGTaGGGTCGGACAGCATGGATG +
Preference number: 2 (lower is better)
Translates to: LEKAVWIPECAPFCISRCSICPR*GRTAWM
Trigger: CATCCATGCTGTCCGACCTCACCGTGGGCAAATTGA...ACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp ACCAGGGCTGCTGCGGTGCAGTGGGCTATCATGAACCCAGAATTGAGACCTCCTTGCCAGGCCTTCTTTTaGTTTCAAGACAATTGGTTT +
Preference number: 2 (lower is better)
Translates to: TRAAAVQWAIMNPELRPPCQAFF*FQDNWF
Trigger: AAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCA...AGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGCCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGATTACAGGCAGTTCCTaGGACTCTCTCTCCATCAAC +
Preference number: 2 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWITGSS*DSLSIN
Trigger: GTTGATGGAGAGAGAGTCTCAGGAACTGCCTGTAAT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp AAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATTTTCCACAGATGAAGGGTaGCACAGAGCCTTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: KRCWRKRSGFRNVLHSVFSTDEG*HRALLS
Trigger: TGAGAGCAAGGCTCTGTGCCACCCTTCATCTGTGGA...AAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 90 bp CAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTTGCTGGAGTCATaGCCCACTTGGGTGCAAGAATACATAAGTTGTGTGTGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: QHFQNRSESRNLLES*PTWVQEYISCVCVH
Trigger: ATGCACACACACACAACTTATGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp GAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGCGGTATCGAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 2 (lower is better)
Translates to: EGLHSLSILLSLIAASSWRYRRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCG...CCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 90 bp GGATTGTGGCTGAGTTCTTTCGGAGAGATTCTAGTGAAAACGCTGTaGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATT +
Preference number: 2 (lower is better)
Translates to: GLWLSSFGEILVKTL*EKAVWIPECAPFCI
Trigger: AATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTCTCCGAAAGAACTCAGCCACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCATTGGTTTCAGTCCATaGGCTTCTAGAACATATTTA +
Preference number: 2 (lower is better)
Translates to: PETLSPSTHQCCAKLRPIIGFSP*ASRTYL
Trigger: TAAATATGTTCTAGAAGCCCATGGACTGAAACCAAT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 90 bp GCAGTCTTTCCAGCCATGCTCTCAGAATCGTGCACATGCAGTGTTTaGCACTTGTTTACCACAATGGGCACAAAGTCATTAATCTTAGCC +
Preference number: 2 (lower is better)
Translates to: AVFPAMLSESCTCSV*HLFTTMGTKSLILA
Trigger: GGCTAAGATTAATGACTTTGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCATGGCTGGAAAGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 90 bp ATAATGGCGACAGGTCTCAGTCTTCGACTTCCCACGTGGCTTGTGTaGGTCACTAGGGAATCAGCAAAAATACTAACAGAAGTTTTGGAG +
Preference number: 2 (lower is better)
Translates to: IMATGLSLRLPTWLV*VTRESAKILTEVLE
Trigger: CTCCAAAACTTCTGTTAGTATTTTTGCTGATTCCCTAGTGACCAACACAAGCCACGTGGGAAGTCGAAGACTGAGACCTGTCGCCATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR TCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACTCTCTCTCTCTGTGTaGGAGAGAGATTGCTTGATT +
Preference number: 2 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTLSLSV*ERDCLI
Trigger: AATCAAGCAATCTCTCTCTCACACAGAGAGAGAGAG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGTACAAAACCGAGGGATaGAATAATGTCAAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWYKTEG*NNVKGR
Trigger: CCTTCCTTTGACATTATTCCATCCCTCGGTTTTGTA...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR TCA 90 bp CTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGACACCAATGGCCAAACTTTGGCTAAGACGTTaGTCCTCAAAGCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: LSILLSLIAASSWTPMAKLWLRR*SSKPRA
Trigger: TGCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAG...TTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR TCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTAAGCTCAGGCCCATCTaGTGTGCCTGTCCTCGAGGA +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLKLRPI*CACPRG
Trigger: TCCTCGAGGACAGGCACATCAGATGGGCCTGAGCTT...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR GCA 90 bp GCTTCTAGAACATATTTAGCATCTGCCCAGCCACTCTTCGGGGACCACATCTTTGCAGGAGGCATTAAATaGTTCAATAACTTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: ASRTYLASAQPLFGDHIFAGGIK*FNNLFQ
Trigger: CTGAAACAAGTTATTGAAGCATTTAATGCCTCCTGC...AAAGATGTGGTCCCCGAAGAGTGGCTGGGCAGATGCTAAATATGTTCTAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR GCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTGGAGGACTTCGTGCTTaGTTGAGGGCTCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLGGLRA*LRAHLL
Trigger: GAGAAGGTGAGCCCTCAAGCAAGCACGAAGTCCTCC...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp GAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGTGGTTTCAAGACAATTaGTTTCAGTCCATGGGCTTC +
Preference number: 2 (lower is better)
Translates to: EGLHSLSILLSLIAASSWWFQDN*FQSMGF
Trigger: GAAGCCCATGGACTGAAACCAATTGTCTTGAAACCA...CCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR GCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAAATGTCTTCTGTCAATaGCCACATCTTTTTGTTTGT +
Preference number: 2 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTNVFCQ*PHLFVC
Trigger: ACAAACAAAAAGATGTGGGCATTGACAGAAGACATT...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR GCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTGTGAGAGCAGGAACTTaGTGGAGTCATTGCCCACTT +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLVRAGT*WSHCPL
Trigger: AAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCAC...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCCTCCATTCCTGCTTTaGCTGGAATGGCTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLPPFLL*LEWLLR
Trigger: TCTGAGAAGCCATTCCAGCCAAAGCAGGAATGGAGG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR TCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCTTCACTTGATAACCTaGCACAGCTTGGAGTCAACT +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLLHLIT*HSLEST
Trigger: AGTTGACTCCAAGCTGTGTCAGGTTATCAAGTGAAG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTAATCGAAGAACACAATaGAGCAAGCCACTGACACAG +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLNRRTQ*SKPLTQ
Trigger: CTGTGTCAGTGGCTTGCTCCATTGTGTTCTTCGATT...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR GCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTGCACATGCAGTGTTTTaGACTTGTTTACCACAATGG +
Preference number: 2 (lower is better)
Translates to: FINWVDYLIMATGLSLRLAHAVF*TCLPQW
Trigger: CCATTGTGGTAAACAAGTGCAAAACACTGCATGTGC...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp GGGTCAAGGCAGCCACAATATCAGCTTGCCGGGCAATaGCGCTGGCTCGCTCCAGGGCTTCACAGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: GSRQPQYQLAGQ*RWLAPGLHSPG
Trigger: CCCTGGGCTGTGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp AGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTaGCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: STSRVKAATISA*RAMALARSRAS
Trigger: TGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp TTCCACGTGCTCGACGACCCTGAGGGCTTTCCTGGCTaGCCATCCTCCCATGGAGACGTGGTCTTCTGTAGC +
Preference number: 3 (lower is better)
Translates to: FHVLDDPEGFPG*PSSHGDVVFCS
Trigger: GCTACAGAAGACCACGTCTCCATGGGAGGATGGGCAGCCAGGAAAGCCCTCAGGGTCGTCGAGCACGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp GCCGCGAGAAGCTCAATGGCTAGCACTTGTTCCACGTaGTCGACGACCCTGAGGGCTTTCCTGGCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: AARSSMASTCST*STTLRAFLAAH
Trigger: ATGGGCAGCCAGGAAAGCCCTCAGGGTCGTCGAGCACGTGGAACAAGTGCTAGCCATTGAGCTTCTCGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp GAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTaGTGGTGCCCTTCAGCACCTCCAGGGTCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: EVGQHGCRYRRL*WCPSAPPGSRQ
Trigger: CTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 72 bp CACATCTTTCCTTCTCCGATGAGCCCCAGAGCAAGATaGGAGAGTGGGGCAAGGTCTCCGCTGGCACCCACA +
Preference number: 3 (lower is better)
Translates to: HIFPSPMSPRAR*ESGARSPLAPT
Trigger: TGTGGGTGCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCTCTGGGGCTCATCGGAGAAGGAAAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp GGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTaGCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAA +
Preference number: 3 (lower is better)
Translates to: GQHGCRYRRLWW*PSAPPGSRQPQ
Trigger: TTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp CGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCT +
Preference number: 3 (lower is better)
Translates to: RSAPGRTPSPAE*LFSGGAETLYP
Trigger: AGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 72 bp GGGCTGGACAGGAGCCCAGCACTTCCAAAACAGGAGTaGGAGCAGGAACTTGCTGGAGTCATTGCCCACTTG +
Preference number: 3 (lower is better)
Translates to: GLDRSPALPKQE*EQELAGVIAHL
Trigger: CAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp GCCTTGCTCTCAGACACCAGGGCTGCTGCGGTGCAGTaGGCTATCATGAACCCAGAATTGAGACCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: ALLSDTRAAAVQ*AIMNPELRPPS
Trigger: TGAAGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGCCCTGGTGTCTGAGAGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CAA 90 bp CTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTGCCGGGCAATGGCCCTTTGGCTAAGACGTaGATCCTCAAAGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: LQHLQGQGSHNISLPGNGPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAGG...GCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 72 bp TGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTaGACACGATCGCAGAACCTGTGGCTTTCTGCGATT +
Preference number: 3 (lower is better)
Translates to: WTCGQQRKVYAS*TRSQNLWLSAI
Trigger: AATCGCAGAAAGCCACAGGTTCTGCGATCGTGTTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp CCAGAGCAAGATGAGAGAGTGGGGCAAGGTCTCCGCTaGCACCCACAGTTCCTTTCTCTGGAACATAGGACA +
Preference number: 3 (lower is better)
Translates to: PEQDERVGQGLR*HPQFLSLEHRT
Trigger: TGTCCTATGTTCCAGAGAAAGGAACTGTGGGTGCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp GTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCAATGGCTAGCACTTGT +
Preference number: 3 (lower is better)
Translates to: VVVFRGRRNSIP*QAARSSMASTC
Trigger: ACAAGTGCTAGCCATTGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 72 bp GACCGGAATCGGAAAGCAACTTCAATTTGCCCACGGTaGGGTCGGACAGCATGGATGTCGGTATCGAAGGCT +
Preference number: 3 (lower is better)
Translates to: DRNRKATSICPR*GRTAWMSVSKA
Trigger: AGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 72 bp TCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTaGTGTGCCTGTCCTCGAGGAAGCCCGTTAAAGATC +
Preference number: 3 (lower is better)
Translates to: STHQCCAKLRPI*CACPRGSPLKI
Trigger: GATCTTTAACGGGCTTCCTCGAGGACAGGCACATCAGATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp ACAGGAGGTAGGCGTGGAGCCCAGTGCCAGAGAGCATaGACACAACACACACAAGATCCTAGCTTCCATTTC +
Preference number: 3 (lower is better)
Translates to: TGGRRGAQCQRA*TQHTQDPSFHF
Trigger: GAAATGGAAGCTAGGATCTTGTGTGTGTTGTGTGCATGCTCTCTGGCACTGGGCTCCACGCCTACCTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CAA 90 bp AGGGCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTTGTTGGTTTCAAGACAATaGGTTTCAGTCCATGGGCTT +
Preference number: 3 (lower is better)
Translates to: RALLRSAPGRTPSPAEWLLVSRQ*VSVHGL
Trigger: AAGCCCATGGACTGAAACCAATTGTCTTGAAACCAA...CAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR TCA 72 bp TCCTCAAAGCCAAGAGCATCCGACACCTCTCAGGACTaGGTGGTTTCCCAACACCTGAAGAATGGGAACGGA +
Preference number: 3 (lower is better)
Translates to: SSKPRASDTSQD*VVSQHLKNGNG
Trigger: TCCGTTCCCATTCTTCAGGTGTTGGGAAACCACTCAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CAA 90 bp CCCACGGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTGCCAAATGCTTCAATAACTaGTTTCAGCGTCTCCAAGGA +
Preference number: 3 (lower is better)
Translates to: PTVRSDSMDVGIEGFGGAKCFNN*FQRLQG
Trigger: TCCTTGGAGACGCTGAAACAAGTTATTGAAGCATTT...GGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CAA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGGGAGAGATATGGAGATaGGGCAATACACCCGAGGGC +
Preference number: 3 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWGEIWR*GNTPEG
Trigger: GCCCTCGGGTGTATTGCCCAATCTCCATATCTCTCC...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CAA 90 bp GGAAAGCAACTTCAATTTGCCCACGGTGAGGTCGGACAGCATGGATGTCGGTATATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCT +
Preference number: 3 (lower is better)
Translates to: GKQLQFAHGEVGQHGCRYIICVP*MSARPS
Trigger: AGAAGGCCTGGCACTCATCAATGGGACACAGATGAT...ATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR-3UTR CAA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCTTGATGATGGAGATTaGGATCCTCACATTTATGCA +
Preference number: 3 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAALDDGD*DPHIYA
Trigger: TGCATAAATGTGAGGATCCAAATCTCCATCATCAAG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 72 bp AACCTCCCAAACCTTTTGGTCAAGAAGCAACCTGTGTaGTGCCTCAATGTCCGGGGCCATGAAGCGATCTTT +
Preference number: 3 (lower is better)
Translates to: NLPNLLVKKQPV*CLNVRGHEAIF
Trigger: AAAGATCGCTTCATGGCCCCGGACATTGAGGCAGCACACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp AACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTaGTCCATTCTGTATTTCTCGATGTACGGTGCGGCA +
Preference number: 3 (lower is better)
Translates to: NAVGESGLDSGM*SILYFSMYGAA
Trigger: TGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp CCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTTaGTGGAGTCATTGCCCACTTGGGTGCAAGAATACA +
Preference number: 3 (lower is better)
Translates to: PSTSKTGVRAGT*WSHCPLGCKNT
Trigger: TGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 72 bp CGGAATGTGCTCCATTCTGTATTTCTCGATGTACGGTaGGGCAACCTCCCAAACCTTTTGGTCAAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: RNVLHSVFLDVR*GNLPNLLVKKQ
Trigger: TTGCTTCTTGACCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp ACAAGATCAGGGCTCTGGGTTCAGCCACTGCATTGCTaGCATGGCCTATCCAGAGTATGTTTGAAAAGAGAT +
Preference number: 3 (lower is better)
Translates to: TRSGLWVQPLHC*HGLSRVCLKRD
Trigger: ATCTCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 72 bp GCAGTCTTTCCAGCCATGCTCTCAGAATCGTGCACATaGAGTGTTTTGCACTTGTTTACCACAATGGGCACA +
Preference number: 3 (lower is better)
Translates to: AVFPAMLSESCT*SVLHLFTTMGT
Trigger: TGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCATGGCTGGAAAGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp GTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTaGCTGGAATGGCTTCTCAGAGAAGCAGAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: VSQQKPFPPFLL*LEWLLREAEKQ
Trigger: TTGCTTCTCTGCTTCTCTGAGAAGCCATTCCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CAA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATTGCACATGCAGTGTTTaGCACTTGTTTACCACAATG +
Preference number: 3 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHCTCSV*HLFTTM
Trigger: CATTGTGGTAAACAAGTGCAAAACACTGCATGTGCA...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 72 bp GCCCAGGGAAGTGATCATCTGTGTCCCATTGATGAGTaGCAGGCCTTCTTTTGGTTTCAAGACAATTGGTTT +
Preference number: 3 (lower is better)
Translates to: AQGSDHLCPIDE*QAFFWFQDNWF
Trigger: AAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCACTCATCAATGGGACACAGATGATCACTTCCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR GCA 72 bp AAAACAAGATCAGGGCTCTGGGTTCAGCCACTGCATTaGTGCCATGGCCTATCCAGAGTATGTTTGAAAAGA +
Preference number: 3 (lower is better)
Translates to: KTRSGLWVQPLH*CHGLSRVCLKR
Trigger: TCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp AGGAAGCCCGTTAAAGATCGTCAGACTCTGGGATTGTaGCTGAGTTCTTTCGGAGAGATTCTAGTGAAAACG +
Preference number: 3 (lower is better)
Translates to: RKPVKDRQTLGL*LSSFGEILVKT
Trigger: CGTTTTCACTAGAATCTCTCCGAAAGAACTCAGCCACAATCCCAGAGTCTGACGATCTTTAACGGGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp AGTGAGAGCAGGAACTTGCTGGAGTCATTGCCCACTTaGGTGCAAGAATACATAAGTTGTGTGTGTGTGCAT +
Preference number: 3 (lower is better)
Translates to: SESRNLLESLPT*VQEYISCVCVH
Trigger: ATGCACACACACACAACTTATGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp GAGATTCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTaGATTCCGGAATGTGCTCCATTCTGTATTTCTCGA +
Preference number: 3 (lower is better)
Translates to: EILVKTLLEKAV*IPECAPFCISR
Trigger: TCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp TGGCAATGTTTGCAAAGGATTATCTTGATTGATAACTaGTGTGGGAAGGTCCAACCCACTATGGGTGGCATC +
Preference number: 3 (lower is better)
Translates to: WQCLQRIILIDN*CGKVQPTMGGI
Trigger: GATGCCACCCATAGTGGGTTGGACCTTCCCACACCAGTTATCAATCAAGATAATCCTTTGCAAACATTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR TCA 72 bp TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTaGGAGAGAGATTGCTTGATTGATAGTGTATGTGAC +
Preference number: 3 (lower is better)
Translates to: SLSLSLSLSLSV*ERDCLIDSVCD
Trigger: GTCACATACACTATCAATCAAGCAATCTCTCTCTCACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR TCA 72 bp AGATTGGCCTGTGGCAATGTTTGCAAAGGATTATCTTaGTTGATAACTGGTGTGGGAAGGTCCAACCCACTA +
Preference number: 3 (lower is better)
Translates to: RLACGNVCKGLS*LITGVGRSNPL
Trigger: TAGTGGGTTGGACCTTCCCACACCAGTTATCAATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR GCA 72 bp AGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACCAATGGCCAAATAGTC +
Preference number: 3 (lower is better)
Translates to: RITQPFDSSFTN*RKFMDTNGQIV
Trigger: GACTATTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CCA 72 bp ACTGGGACAATTCAACTGGGACTACCTAGATCAGATTaGCCTGTGGCAATGTTTGCAAAGGATTATCTTGAT +
Preference number: 3 (lower is better)
Translates to: TGTIQLGLPRSD*PVAMFAKDYLD
Trigger: ATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCTGATCTAGGTAGTCCCAGTTGAATTGTCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR-3UTR CAA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTAGTGAGAGCAGGAACTaGCTGGAGTCATTGCCCACT +
Preference number: 3 (lower is better)
Translates to: FINWVDYLIMATGLSLRLSESRN*LESLPT
Trigger: AGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACT...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp TCAGCCCATGGTCTAAGACCTGTTAATCTTTCTGATTaGATCTTTCAGAAGCTTGGGAAAAGAGATAGAGGT +
Preference number: 3 (lower is better)
Translates to: SAHGLRPVNLSD*IFQKLGKRDRG
Trigger: ACCTCTATCTCTTTTCCCAAGCTTCTGAAAGATCCAATCAGAAAGATTAACAGGTCTTAGACCATGGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR TCA 72 bp CAATGGAGCAAGCCACTGACACAGTTTGTAACCCGATaGCCATATATATATACTCTTGAACTAACAAAGCTG +
Preference number: 3 (lower is better)
Translates to: QWSKPLTQFVTR*PYIYTLELTKL
Trigger: CAGCTTTGTTAGTTCAAGAGTATATATATATGGTCATCGGGTTACAAACTGTGTCAGTGGCTTGCTCCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CCA 72 bp CAATTCAACTGGGACTACCTAGATCAGATTGGCCTGTaGCAATGTTTGCAAAGGATTATCTTGATTGATAAC +
Preference number: 3 (lower is better)
Translates to: QFNWDYLDQIGL*QCLQRIILIDN
Trigger: GTTATCAATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCTGATCTAGGTAGTCCCAGTTGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR TCA 72 bp ACAGTTTGTAACCCGATGACCATATATATATACTCTTaGACTAACAAAGCTGTATACAAAACCGAGGGATGG +
Preference number: 3 (lower is better)
Translates to: TVCNPMTIYIYS*TNKAVYKTEGW
Trigger: CCATCCCTCGGTTTTGTATACAGCTTTGTTAGTTCAAGAGTATATATATATGGTCATCGGGTTACAAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR TCA 72 bp TTCTCTGTGACTCAGGAGAGACTTAAGAACAAATTCTaGCTTGAAACGTATTTGTCAGATTATGGTATTAGT +
Preference number: 3 (lower is better)
Translates to: FSVTQERLKNKF*LETYLSDYGIS
Trigger: ACTAATACCATAATCTGACAAATACGTTTCAAGTCAGAATTTGTTCTTAAGTCTCTCCTGAGTCACAGAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp CAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTaGCCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QHLQGQGSHNIS*PGNGAGSLQGF
Trigger: GAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR CCA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCAGCTTGCCGGGCAATaGCGCTGGCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAAQLAGQ*RWLAPG
Trigger: CCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp GCTGCTGCGGTGCAGTGGGCTATCATGAACCCAGAATaGAGACCTCCTTCAGCCACCAGGAAGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AAAVQWAIMNPE*RPPSATRKAGS
Trigger: GCTGCCTGCCTTCCTGGTGGCTGAAGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR TCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PETLSPSTHQCCAKLRPIVSFPS*QGTASH
Trigger: ATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCAC...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCAAGAAGCAACCTGTGTaGTGCCTCAATGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAAKKQPV*CLNVRG
Trigger: GCCCCGGACATTGAGGCAGCACACAGGTTGCTTCTT...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCGCTGCTGCGGTGCAGTaGGCTATCATGAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAAAAAVQ*AIMNPE
Trigger: TTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGC...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp AGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTaGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAPGRTPSPAEW*FSGGAETLYPG
Trigger: GCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR TCA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTT +
Preference number: 4 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAALHPPK*SHHCPV
Trigger: AACCGGACAATGGTGGCTTCACTTCGGTGGATGAAG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp GTCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTaGCCCACGGTGAGGTCGGACAGCATGGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: VQEGPESESNFN*PTVRSDSMDVG
Trigger: ACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR GCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCAAGCAACCTGTGTGCTaGCTCAATGTCCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PETLSPSTHQCCAKLRPIKQPVC*LNVRGH
Trigger: ATGGCCCCGGACATTGAGGCAGCACACAGGTTGCTT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGAGGGCTTTCCTGGCTaGCCATCCTCCCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHEGFPG*PSSHGD
Trigger: GTCTCCATGGGAGGATGGGCAGCCAGGAAAGCCCTC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PETLSPSTHQCCAKLRPIRNSIP*QAARSS
Trigger: TGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCGGGAACGGACTAAGTTaGCTTGAAGCTCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: PETLSPSTHQCCAKLRPIGNGLS*LEAPVA
Trigger: AGCTACAGGAGCTTCAAGTCAACTTAGTCCGTTCCC...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGGGCAAGGTCTCCGCTaGCACCCACAGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHGQGLR*HPQFLS
Trigger: AGAAAGGAACTGTGGGTGCCAGCGGAGACCTTGCCC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp GCCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTaGCTGGAGTCATTGCCCACTTGGGTGCAAGAATAC +
Preference number: 4 (lower is better)
Translates to: AQHFQNRSESRN*LESLPTWVQEY
Trigger: GTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CTGTTCAGTTCTGTAGTGATGATGTCCTTCACAAAGGCTATTGTGTCGTTCACCGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LFSSVVMMSFTKAIVSFTVSFPS*QGTASH
Trigger: ATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCAC...GGTGAACGACACAATAGCCTTTGTGAAGGACATCATCACTACAGAACTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR TCA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCTTCCAAAACCTGTGGTaGTGCCATAAACAACTGTTC +
Preference number: 4 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAAFQNLW*CHKQLF
Trigger: GAACAGTTGTTTATGGCATCACCACAGGTTTTGGAA...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGATTTCTGATGGGTGGTaGTCCGAGTCCAGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWISDGW*SESRRD
Trigger: GTCCCTCCTGGACTCGGATCACCACCCATCAGAAAT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAAGGCAGGCAGCTCGCTaGGGGAAGGATTACACAGCC +
Preference number: 4 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTRQAAR*GKDYTA
Trigger: GGCTGTGTAATCCTTCCCTCAGCGAGCTGCCTGCCT...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAAGCCCCAGAGCAAGATaGGAGAGTGGGGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTSPRAR*ESGARS
Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTGGGGCT...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGCTTTCTGCGATTTCTaGTGGGTGGTGATCCGAGTC +
Preference number: 4 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHAFCDF*WVVIRV
Trigger: GACTCGGATCACCACCCATCAGAAATCGCAGAAAGC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAGCAGGCCCAGGCCCTTaGACCGATGCACAAGGAATT +
Preference number: 4 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTAGPGP*TDAQGI
Trigger: AATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGC...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp CACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGAAAACTCCTTCTGGCTaGGACGGAATGAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: HLLQRSGCFQGAQKLYTLKTPSG*DGMKSG
Trigger: TCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTT...CAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR GCA 90 bp GGAAAGCAACTTCAATTTGCCCACGGTGAGGTCGGACAGCATGGATGTCGGTATACCTCCCGGGACTGCTaGACTTTCTTCTCAGCAATT +
Preference number: 4 (lower is better)
Translates to: GKQLQFAHGEVGQHGCRYTSRDC*TFFSAI
Trigger: AATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGT...ATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 72 bp TTTCTCGATGTACGGTGCGGCAACCTCCCAAACCTTTaGGTCAAGAAGCAACCTGTGTGCTGCCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: FLDVRCGNLPNL*VKKQPVCCLNV
Trigger: GACATTGAGGCAGCACACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR TCA 90 bp CTGTTCAGTTCTGTAGTGATGATGTCCTTCACAAAGGCTATTGTGTCGTTCACCGTCCCTTGCCCAGGTTaGCCAGATCCTCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LFSSVVMMSFTKAIVSFTVPCPG*PDPLCS
Trigger: TGAGCACAGAGGATCTGGTCAACCTGGGCAAGGGAC...GGTGAACGACACAATAGCCTTTGTGAAGGACATCATCACTACAGAACTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR TCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACATCAATTTGCCCACGGTaGGGTCGGACAGCATGGATG +
Preference number: 4 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTSICPR*GRTAWM
Trigger: CATCCATGCTGTCCGACCTCACCGTGGGCAAATTGA...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGACCTCCCGGGACTGCTaGACTTTCTTCTCAGCAATT +
Preference number: 4 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWTSRDC*TFFSAI
Trigger: AATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACC +
Preference number: 4 (lower is better)
Translates to: PETLSPSTHQCCAKLRPISSFTN*RKFMDT
Trigger: GGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGA...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTAGCAAGATGAGAGAGTaGGGCAAGGTCTCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: KAPSTPQTIVTRKQDQGSSKMRE*GKVSAG
Trigger: GCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGGTCCAGGGCTTTGGCTaGGTATTCACCATGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWVQGFG*VFTMEV
Trigger: AACTTCCATGGTGAATACCCAGCCAAAGCCCTGGAC...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp GCTTCACAGCCCAGGGAAGTGATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCTTTTGGTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: ASQPREVIICVP*MSARPSFGFKT
Trigger: TGTCTTGAAACCAAAAGAAGGCCTGGCACTCATCAATGGGACACAGATGATCACTTCCCTGGGCTGTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR TCA 90 bp AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTGACACCTCTCAGGACTaGGTGGTTTCCCAACACCTG +
Preference number: 4 (lower is better)
Translates to: KAPSTPQTIVTRKQDQGSDTSQD*VVSQHL
Trigger: CAGGTGTTGGGAAACCACTCAGTCCTGAGAGGTGTC...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGCTTTGGCTAAGACGTTaGTCCTCAAAGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWLWLRR*SSKPRA
Trigger: TGCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAG...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACATCTTTCCTTCTCCGATaGGCCCCAGAGCAAGATGAG +
Preference number: 4 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTSFLLR*APEQDE
Trigger: CTCATCTTGCTCTGGGGCTCATCGGAGAAGGAAAGA...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACAATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTQCPGP*SDLLSR
Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATTG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp GAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGGCAGGCCCAGGCCCTTaGACCGATGCACAAGGAATT +
Preference number: 4 (lower is better)
Translates to: EGLHSLSILLSLIAASSWAGPGP*TDAQGI
Trigger: AATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGC...CCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR GCA 90 bp TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCAGCACTTGTTCCACGTaGTCGACGACCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSFLEGWLKPVVNRTQMISTCST*STTLRA
Trigger: AGCCCTCAGGGTCGTCGAGCACGTGGAACAAGTGCT...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACATATCGAAGGCTTTGGTaGTGCCCTTCAGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTYRRLW*CPSAPP
Trigger: TGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATA...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTCGGTATCGAAGGCTTTaGTGGTGCCCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KAPSTPQTIVTRKQDQGSRYRRL*WCPSAP
Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCG...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACCCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLFILSRKTTPQPQGTQYPSPAE*LFSGGA
Trigger: TGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGG...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp GAAATTGTCTCCCCTCGACTGGCAAAGACCATAGGATaGTCTGTGGCGCTGTTCAGTTCTGTAGTGATGATG +
Preference number: 4 (lower is better)
Translates to: EIVSPRLAKTIG*SVALFSSVVMM
Trigger: CATCATCACTACAGAACTGAACAGCGCCACAGACAATCCTATGGTCTTTGCCAGTCGAGGGGAGACAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
3UTR CAA 72 bp GAAAACAAGATCAGGGCTCTGGGTTCAGCCACTGCATaGCTGCCATGGCCTATCCAGAGTATGTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: ENKIRALGSATA*LPWPIQSMFEK
Trigger: CTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp CTGTTCAGTTCTGTAGTGATGATGTCCTTCACAAAGGCTATTGTGTCGTTCACCCTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTT +
Preference number: 4 (lower is better)
Translates to: LFSSVVMMSFTKAIVSFTLHPPK*SHHCPV
Trigger: AACCGGACAATGGTGGCTTCACTTCGGTGGATGAAG...GGTGAACGACACAATAGCCTTTGTGAAGGACATCATCACTACAGAACTGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR GCA 90 bp TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGAAAACTCCTTCTGGCTaGGACGGAATGAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SMEVLANRNPFLHSCFGWKTPSG*DGMKSG
Trigger: TCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACCCTCCCATGGAGACGTaGTCTTCTGTAGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SLFILSRKTTPQPQGTQYPPMET*SSVAAL
Trigger: CAGTGCTGCTACAGAAGACCACGTCTCCATGGGAGG...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAAATAGTCCAGGGCTTTaGCTGGGTATTCACCATGGA +
Preference number: 4 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTNSPGL*LGIHHG
Trigger: TCCATGGTGAATACCCAGCCAAAGCCCTGGACTATT...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGTTCATGGACACCAATaGCCAAATAGTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTVHGHQ*PNSPGL
Trigger: AAGCCCTGGACTATTTGGCCATTGGTGTCCATGAAC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACTCCACAGATGAAGGGTaGCACAGAGCCTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLFILSRKTTPQPQGTQYSTDEG*HRALLS
Trigger: TGAGAGCAAGGCTCTGTGCCACCCTTCATCTGTGGA...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCGAAGGCTTTGGTGGTaGCCTTCAGCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FINWVDYLIMATGLSLRLRRLWW*PSAPPG
Trigger: CCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp CCAGCCATGCTCTCAGAATCGTGCACATGCAGTGTTTaGCACTTGTTTACCACAATGGGCACAAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: PAMLSESCTCSV*HLFTTMGTKSL
Trigger: TAATGACTTTGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCATGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp ACAGGTCTCAGTCTTCGACTTCCCACGTGGCTTGTGTaGGTCACTAGGGAATCAGCAAAAATACTAACAGAA +
Preference number: 4 (lower is better)
Translates to: TGLSLRLPTWLV*VTRESAKILTE
Trigger: TTCTGTTAGTATTTTTGCTGATTCCCTAGTGACCAACACAAGCCACGTGGGAAGTCGAAGACTGAGACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR TCA 90 bp TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCATGGAAGTTTCCTCCTaGAATTGTCTCCCCTCGACT +
Preference number: 4 (lower is better)
Translates to: FSFLEGWLKPVVNRTQMIMEVSS*NCLPST
Trigger: AGTCGAGGGGAGACAATTTCAGGAGGAAACTTCCAT...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCAACATATTTAGCATCTaGCCAGCCACTCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: FSFLEGWLKPVVNRTQMINIFSI*PATLRG
Trigger: TCCCCGAAGAGTGGCTGGGCAGATGCTAAATATGTT...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACATGGTTTCAAGACAATTaGTTTCAGTCCATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTWFQDN*FQSMGF
Trigger: GAAGCCCATGGACTGAAACCAATTGTCTTGAAACCA...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCCGATCGCAGAACCTGTaGCTTTCTGCGATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSFLEGWLKPVVNRTQMIRSQNL*LSAISD
Trigger: ATCAGAAATCGCAGAAAGCCACAGGTTCTGCGATCG...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp TGGGACTACCTAGATCAGATTGGCCTGTGGCAATGTTaGCAAAGGATTATCTTGATTGATAACTGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: WDYLDQIGLWQC*QRIILIDNWCG
Trigger: CCCACACCAGTTATCAATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCTGATCTAGGTAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp CTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGACACCAATGGCCAAACAGGCTCCCGGTATTTaGTGTATAGGAAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: LSILLSLIAASSWTPMAKQAPGI*CIGKLL
Trigger: AAGGAGTTTTCCTATACAGCAAATACCGGGAGCCTG...TTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR GCA 90 bp AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACCTGGATTCCGGAATGTaGTCCATTCTGTATTTCTCG +
Preference number: 4 (lower is better)
Translates to: SLFILSRKTTPQPQGTQYLDSGM*SILYFS
Trigger: CGAGAAATACAGAATGGAGCACATTCCGGAATCCAG...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCCCAACACCTGAAGAATaGGAACGGACTAAGTTGACT +
Preference number: 4 (lower is better)
Translates to: FSFLEGWLKPVVNRTQMIPTPEE*ERTKLT
Trigger: AGTCAACTTAGTCCGTTCCCATTCTTCAGGTGTTGG...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATATTGGTTTCAGTCCATaGGCTTCTAGAACATATTTA +
Preference number: 4 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHIGFSP*ASRTYL
Trigger: TAAATATGTTCTAGAAGCCCATGGACTGAAACCAAT...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACATGCCAGGCCTTCTTTTaGTTTCAAGACAATTGGTTT +
Preference number: 4 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTCQAFF*FQDNWF
Trigger: AAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCA...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp CCACTGCATTGCTGCCATGGCCTATCCAGAGTATGTTaGAAAAGAGATGAGTTTTACACATTACAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLHCCHGLSRVC*KRDEFYTLQAV
Trigger: AACTGCCTGTAATGTGTAAAACTCATCTCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR GCA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGCAGGAGGCATTAAATaGTTCAATAACTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTAGGIK*FNNLFQ
Trigger: CTGAAACAAGTTATTGAAGCATTTAATGCCTCCTGC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
3UTR CAA 72 bp ATGCTCTCAGAATCGTGCACATGCAGTGTTTTGCACTaGTTTACCACAATGGGCACAAAGTCATTAATCTTA +
Preference number: 4 (lower is better)
Translates to: MLSESCTCSVLH*FTTMGTKSLIL
Trigger: TAAGATTAATGACTTTGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS TCA 90 bp CGCACAGCCTCACGGCCCAGCCAGCCAACAGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCATTCCCCACGCACGTGCACTGTGTAC +
Preference number: 5 (lower is better)
Translates to: RTASRPSQPTVSFPS*QGTASHSPRTCTVY
Trigger: GTACACAGTGCACGTGCGTGGGGAATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGAGGCTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS TCA 90 bp TCTTCATGTAGCGTCGCACAGCCTCACGGCCCAGCCAGCCAACAGTaGGCTTCCCATCCTGACAGGGCACCGCCAGCCATTCCCCACGCA +
Preference number: 5 (lower is better)
Translates to: SSCSVAQPHGPASQQ*ASHPDRAPPAIPHA
Trigger: TGCGTGGGGAATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGAGGCTGTGCGACGCTACATGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp TCAATGGCTAGCACTTGTTCCACGTGCTCGACGACCCTGAGGGCTTTCCTGGCTTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SMASTCSTCSTTLRAFLASSSSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA...AGCCAGGAAAGCCCTCAGGGTCGTCGAGCACGTGGAACAAGTGCTAGCCATTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR CAA 90 bp GCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTTGTTTAGCAGGCCCAGGCCCTaGCACCGATGCACAAGGAAT +
Preference number: 5 (lower is better)
Translates to: ALLRSAPGRTPSPAEWLFSRPRP*HRCTRN
Trigger: ATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCT...AAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS GCA 90 bp TCCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATaGACAAGGAATTGCACTTCATCCACCGAAGTGAAGCCACCATTG +
Preference number: 5 (lower is better)
Translates to: SSSSSLSSRPRPLHR*TRNCTSSTEVKPPL
Trigger: CAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp TCCAGGGCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTCAGGCTCCCGGTATTaGCTGTATAGGAAAACTCCT +
Preference number: 5 (lower is better)
Translates to: SRALLRSAPGRTPSPAEWSGSRY*LYRKTP
Trigger: AGGAGTTTTCCTATACAGCAAATACCGGGAGCCTGA...CCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR CAA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTCGGTATCGAAGGCTTaGGTGGTGCCCTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: PETLSPSTHQCCAKLRPISVSKA*VVPFST
Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGA...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCGAAAGCAACTTCAATTaGCCCACGGTGAGGTCGGAC +
Preference number: 5 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAAESNFN*PTVRSD
Trigger: GTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTC...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAATSTNS*SSKATS
Trigger: GGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGT...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS GCA 90 bp TCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATTaGACTTCATCCACCGAAGTGAAGCCACCATTGTCCGGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLSSRPRPLHRCTRN*TSSTEVKPPLSGLF
Trigger: GAACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp CTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTGCCGGGCAATGGCGAAGTGAAGCCACCATaGTCCGGTTTGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LQHLQGQGSHNISLPGNGEVKPP*SGLFFM
Trigger: CATGAAGAACAAACCGGACAATGGTGGCTTCACTTC...GCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR CAA 90 bp ACCAGGGCTGCTGCGGTGCAGTGGGCTATCATGAACCCAGAATTGAGACCTCCTACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: TRAAAVQWAIMNPELRPPTSTNS*SSKATS
Trigger: GGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGT...AGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGCCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS TCA 90 bp GGCCCTTGCACCGATGCACAAGGAATTGCACTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTTTGTTCTTCATGTAGCGTCGCACAG +
Preference number: 5 (lower is better)
Translates to: GPCTDAQGIALHPPK*SHHCPVCSSCSVAQ
Trigger: CTGTGCGACGCTACATGAAGAACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCAGCTCCTGTAGCTTATaGGCAGGGATTACAGTTCTA +
Preference number: 5 (lower is better)
Translates to: NEFTMLLGWLSSEPPGAASSCSL*AGITVL
Trigger: TAGAACTGTAATCCCTGCCAATAAGCTACAGGAGCT...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SLFILSRKTTPQPQGTQYSSSSS*SSRPRP
Trigger: GGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCAACCTCCCAAACCTTTaGGTCAAGAAGCAACCTGTG +
Preference number: 5 (lower is better)
Translates to: PETLSPSTHQCCAKLRPINLPNL*VKKQPV
Trigger: CACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp TGCTCCATTCTGTATTTCTCGATGTACGGTGCGGCAACCTCCCAAACCTTTTGGCCGATGCACAAGGAATaGCACTTCATCCACCGAAGT +
Preference number: 5 (lower is better)
Translates to: CSILYFSMYGAATSQTFWPMHKE*HFIHRS
Trigger: ACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGG...CCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016031.14
CDS-3UTR CAA 90 bp GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATCCGATGCACAAGGAATaGCACTTCATCCACCGAAGT +
Preference number: 5 (lower is better)
Translates to: VNSQEAMFLQIAALTIHHPMHKE*HFIHRS
Trigger: ACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGG...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTTGGTTTCAAGACAATaGGTTTCAGTCCATGGGCTT +
Preference number: 5 (lower is better)
Translates to: PETLSPSTHQCCAKLRPILVSRQ*VSVHGL
Trigger: AAGCCCATGGACTGAAACCAATTGTCTTGAAACCAA...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS TCA 90 bp ATAGTCCAGGGCTTTGGCTGGGTATTCACCATGGAAGTTTCCTCCTaGAATTGTCTCCCCTCGACTGGCAAAGACCATAGGATTGTCTGT +
Preference number: 5 (lower is better)
Translates to: IVQGFGWVFTMEVSS*NCLPSTGKDHRIVC
Trigger: ACAGACAATCCTATGGTCTTTGCCAGTCGAGGGGAGACAATTTCAGGAGGAAACTTCCATGGTGAATACCCAGCCAAAGCCCTGGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCTCTCCAGCGGAGTGGTaGTTTTCAGGGGGCGCAGAA +
Preference number: 5 (lower is better)
Translates to: FSFLEGWLKPVVNRTQMISPAEW*FSGGAE
Trigger: TTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGA...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACGTCAGACTCTGGGATaGTGGCTGAGTTCTTTCGGA +
Preference number: 5 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTRQTLG*WLSSFG
Trigger: TCCGAAAGAACTCAGCCACAATCCCAGAGTCTGACG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACCTTTGGCTAAGACGTaGATCCTCAAAGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: HPQMPHLCNGRLLSEVTTPLAKT*ILKAKS
Trigger: GCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAGG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS TCA 90 bp CCCGGTATTTGCTGTATAGGAAAACTCCTTCTGGCTGCGACGGAATaGAATCAGGAGACATCACATCACCTTCAATCACCACTTCTACGA +
Preference number: 5 (lower is better)
Translates to: PGICCIGKLLLAATE*NQETSHHLQSPLLR
Trigger: TCGTAGAAGTGGTGATTGAAGGTGATGTGATGTCTCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCAAATACCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 90 bp GCTGAGGGAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACCAATGGCCAAATAGTCCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: AEGRITQPFDSSFTN*RKFMDTNGQIVQGF
Trigger: AAAGCCCTGGACTATTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTCCCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGAAGTGAAGCCACCATaGTCCGGTTTGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: PSFHFSSNRRTQWSKPLTEVKPP*SGLFFM
Trigger: CATGAAGAACAAACCGGACAATGGTGGCTTCACTTC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KAPSTPQTIVTRKQDQGSIICVP*MSARPS
Trigger: AGAAGGCCTGGCACTCATCAATGGGACACAGATGAT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTACAACTGTTCTTTCTTaGATGATGCTGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: KAPSTPQTIVTRKQDQGSTTVLS*MMLSMT
Trigger: GGTCATCGACAGCATCATCAAAGAAAGAACAGTTGT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTAAATGCTTCAATAACTaGTTTCAGCGTCTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: KAPSTPQTIVTRKQDQGSKCFNN*FQRLQG
Trigger: TCCTTGGAGACGCTGAAACAAGTTATTGAAGCATTT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCCTTCACAAAGGCTATaGTGTCGTTCACCACACCGT +
Preference number: 5 (lower is better)
Translates to: FINWVDYLIMATGLSLRLPSQRL*CRSPHR
Trigger: ACGGTGTGGTGAACGACACAATAGCCTTTGTGAAGG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS-3UTR CAA 90 bp TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTTCAGGCTCCCGGTATTaGCTGTATAGGAAAACTCCT +
Preference number: 5 (lower is better)
Translates to: FINWVDYLIMATGLSLRLSGSRY*LYRKTP
Trigger: AGGAGTTTTCCTATACAGCAAATACCGGGAGCCTGA...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8
CDS TCA 72 bp TCACGGCCCAGCCAGCCAACAGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCATTCCCCACGCACGTGC +
Preference number: 6 (lower is better)
Translates to: SRPSQPTVSFPS*QGTASHSPRTC
Trigger: GCACGTGCGTGGGGAATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS TCA 72 bp AGCGTCGCACAGCCTCACGGCCCAGCCAGCCAACAGTaGGCTTCCCATCCTGACAGGGCACCGCCAGCCATT +
Preference number: 6 (lower is better)
Translates to: SVAQPHGPASQQ*ASHPDRAPPAI
Trigger: AATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGAGGCTGTGCGACGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp CCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTTaGACCGATGCACAAGGAATTGCACTTCATCCACCG +
Preference number: 6 (lower is better)
Translates to: PARPHCPAGPGP*TDAQGIALHPP
Trigger: CGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 72 bp TCATTGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACA +
Preference number: 6 (lower is better)
Translates to: SLSSKATSSSSS*SSRPRPLHRCT
Trigger: TGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 90 bp AAGGCCACCTCCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTaGCACCGATGCACAAGGAATTGCACTTCATCCACCGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: KATSSSSSLSSRPRP*HRCTRNCTSSTEVK
Trigger: CTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 72 bp TCCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTaGCACCGATGCACAAGGAATTGCACTTCATCCACC +
Preference number: 6 (lower is better)
Translates to: SSSSSLSSRPRP*HRCTRNCTSST
Trigger: GGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 90 bp TCTACGAACTCATTGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATTGC +
Preference number: 6 (lower is better)
Translates to: STNSLSSKATSSSSS*SSRPRPLHRCTRNC
Trigger: GCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGAGTTCGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp AGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATTaGACTTCATCCACCGAAGTGAAGCCACCATTGTCC +
Preference number: 6 (lower is better)
Translates to: SRPRPLHRCTRN*TSSTEVKPPLS
Trigger: GGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 72 bp CAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATaGCACTTCATCCACCGAAGTGAAGCCACCATTGTC +
Preference number: 6 (lower is better)
Translates to: QQAQALAPMHKE*HFIHRSEATIV
Trigger: GACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp TCCTCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATaGACAAGGAATTGCACTTCATCCACCGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: SSLSSRPRPLHR*TRNCTSSTEVK
Trigger: CTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 90 bp CTCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATaGCACTTCATCCACCGAAGTGAAGCCACCATTGTCCGGTTTGTT +
Preference number: 6 (lower is better)
Translates to: LIVQQAQALAPMHKE*HFIHRSEATIVRFV
Trigger: AACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 90 bp TCAGGAGACATCACATCACCTTCAATCACCACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATTGTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SGDITSPSITTSTNS*SSKATSSSSSLSSR
Trigger: CCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGTGGTGATTGAAGGTGATGTGATGTCTCCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS TCA 72 bp GACCTCCCGGGACTGCTGCACTTTCTTCTCAGCAATTaGAGTGAGCTTTATCTTGTAACGTCCCTTGCCCAG +
Preference number: 6 (lower is better)
Translates to: DLPGLLHFLLSN*SELYLVTSLAQ
Trigger: CTGGGCAAGGGACGTTACAAGATAAAGCTCACTTCAATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS TCA 72 bp ACCGATGCACAAGGAATTGCACTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTTTGTTCTTCATGTAGC +
Preference number: 6 (lower is better)
Translates to: TDAQGIALHPPK*SHHCPVCSSCS
Trigger: GCTACATGAAGAACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS CAA 72 bp ATCACATCACCTTCAATCACCACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: ITSPSITTSTNS*SSKATSSSSSL
Trigger: CAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGTGGTGATTGAAGGTGATGTGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp TCCCGGTATTTGCTGTATAGGAAAACTCCTTCTGGCTaGGACGGAATGAAATCAGGAGACATCACATCACCT +
Preference number: 6 (lower is better)
Translates to: SRYLLYRKTPSG*DGMKSGDITSP
Trigger: AGGTGATGTGATGTCTCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCAAATACCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp CATCTAGGGCAATGTATTTTTCAGGCTCCCGGTATTTaGTGTATAGGAAAACTCCTTCTGGCTGCGACGGAA +
Preference number: 6 (lower is better)
Translates to: HLGQCIFQAPGI*CIGKLLLAATE
Trigger: TTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCAAATACCGGGAGCCTGAAAAATACATTGCCCTAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp TCTTTGATGATGCTGTCGATGACCTCCCGGGACTGCTaGACTTTCTTCTCAGCAATTGAAGTGAGCTTTATC +
Preference number: 6 (lower is better)
Translates to: SLMMLSMTSRDC*TFFSAIEVSFI
Trigger: GATAAAGCTCACTTCAATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGTCATCGACAGCATCATCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS GCA 72 bp CTTTCTTTGATGATGCTGTCGATGACCTCCCGGGACTaGTGCACTTTCTTCTCAGCAATTGAAGTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: LSLMMLSMTSRD*CTFFSAIEVSF
Trigger: AAAGCTCACTTCAATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGTCATCGACAGCATCATCAAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS TCA 72 bp TGCTGTATAGGAAAACTCCTTCTGGCTGCGACGGAATaGAATCAGGAGACATCACATCACCTTCAATCACCA +
Preference number: 6 (lower is better)
Translates to: CCIGKLLLAATE*NQETSHHLQSP
Trigger: TGGTGATTGAAGGTGATGTGATGTCTCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016031.14
ENSMUST00000129421.8
CDS TCA 72 bp GTTTCCCAACACCTGAAGAATGGGAACGGACTAAGTTaGCTTGAAGCTCCTGTAGCTTATTGGCAGGGATTA +
Preference number: 6 (lower is better)
Translates to: VSQHLKNGNGLS*LEAPVAYWQGL
Trigger: TAATCCCTGCCAATAAGCTACAGGAGCTTCAAGTCAACTTAGTCCGTTCCCATTCTTCAGGTGTTGGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129421.8