Pregenerated sensors for HAL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020017Ensembl transcript IDs: ENSMUST00000016031.14, ENSMUST00000129421.8
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTGCCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTaGCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTCACAGCCCAGG | + |
Preference number: 1 (lower is better) Translates to: VPFSTSRVKAATISA*RAMALARSRASQPR Trigger: CCTGGGCTGTGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 90 bp | GCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCG | + |
Preference number: 1 (lower is better) Translates to: ALLRSAPGRTPSPAE*LFSGGAETLYPGRP Trigger: CGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 90 bp | CACGGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTaGTGCCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAG | + |
Preference number: 1 (lower is better) Translates to: HGEVGQHGCRYRRLW*CPSAPPGSRQPQYQ Trigger: CTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 90 bp | TCCAGCGGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCAATGGCTAGCACTTGTTCCACGTGC | + |
Preference number: 1 (lower is better) Translates to: SSGVVVFRGRRNSIP*QAARSSMASTCSTC Trigger: GCACGTGGAACAAGTGCTAGCCATTGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR TCA 90 bp | ACCACACCGTGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTaGACACGATCGCAGAACCTGTGGCTTTCTGCGATTTCTGATGGG | + |
Preference number: 1 (lower is better) Translates to: TTPWTCGQQRKVYAS*TRSQNLWLSAISDG Trigger: CCCATCAGAAATCGCAGAAAGCCACAGGTTCTGCGATCGTGTTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCACGGTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR TCA 90 bp | AGGAAGGCAGGGCTGGACAGGAGCCCAGCACTTCCAAAACAGGAGTaGGAGCAGGAACTTGCTGGAGTCATTGCCCACTTGGGTGCAAGA | + |
Preference number: 1 (lower is better) Translates to: RKAGLDRSPALPKQE*EQELAGVIAHLGAR Trigger: TCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCAGCCCTGCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR GCA 90 bp | GGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTaGCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTT | + |
Preference number: 1 (lower is better) Translates to: GEVGQHGCRYRRLWW*PSAPPGSRQPQYQL Trigger: AAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR TCA 90 bp | TCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTTGCCCACGGTaGGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTG | + |
Preference number: 1 (lower is better) Translates to: SRRDRNRKATSICPR*GRTAWMSVSKALVV Trigger: CACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR TCA 90 bp | TTTGGTCAAGAAGCAACCTGTGTGCTGCCTCAATGTCCGGGGCCATaGAGCGATCTTTTATCCAGGGCCTTACTACGGAGCGCACCAGGT | + |
Preference number: 1 (lower is better) Translates to: FGQEATCVLPQCPGP*SDLLSRALLRSAPG Trigger: ACCTGGTGCGCTCCGTAGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGACATTGAGGCAGCACACAGGTTGCTTCTTGACCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR TCA 90 bp | CTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTaGTGTGCCTGTCCTCGAGGAAGCCCGTTAAAGATCGTCAGACTC | + |
Preference number: 1 (lower is better) Translates to: LSPSTHQCCAKLRPI*CACPRGSPLKIVRL Trigger: GAGTCTGACGATCTTTAACGGGCTTCCTCGAGGACAGGCACATCAGATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 90 bp | GTATACAAAACCGAGGGATGGAATAATGTCAAAGGAAGGCAGGGCTaGACAGGAGCCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAAC | + |
Preference number: 1 (lower is better) Translates to: VYKTEGWNNVKGRQG*TGAQHFQNRSESRN Trigger: GTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCAGCCCTGCCTTCCTTTGACATTATTCCATCCCTCGGTTTTGTATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR GCA 90 bp | TCTGGATTCCGGAATGTGCTCCATTCTGTATTTCTCGATGTACGGTaGGGCAACCTCCCAAACCTTTTGGTCAAGAAGCAACCTGTGTGC | + |
Preference number: 1 (lower is better) Translates to: SGFRNVLHSVFLDVR*GNLPNLLVKKQPVC Trigger: GCACACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR GCA 90 bp | TCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTaGTCCATTCTGTATTTCTCGATGTACGGTGCGGCAACCTCCCAA | + |
Preference number: 1 (lower is better) Translates to: SSENAVGESGLDSGM*SILYFSMYGAATSQ Trigger: TTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR GCA 90 bp | GCTGAGGGAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACCAATGGCCAAATAGTCCAGGGCCAT | + |
Preference number: 1 (lower is better) Translates to: AEGRITQPFDSSFTN*RKFMDTNGQIVQGH Trigger: ATGGCCCTGGACTATTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTCCCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 90 bp | CAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTaGGTTCAGCCACTGCATTGCTGCCATGGCCTATCCAGAGTATGT | + |
Preference number: 1 (lower is better) Translates to: QYSSNHSNKKTRSGL*VQPLHCCHGLSRVC Trigger: ACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CCA 90 bp | TCTTTCGGAGAGATTCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTaGATTCCGGAATGTGCTCCATTCTGTATTTCTCGATGTACGGTG | + |
Preference number: 1 (lower is better) Translates to: SFGEILVKTLLEKAV*IPECAPFCISRCTV Trigger: CACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTCTCCGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 90 bp | GAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTaGAATGGCTTCTCAGAGAAGCAGAGAAGCAAATATGAGGTGTTA | + |
Preference number: 1 (lower is better) Translates to: EVLANRNPFLHSCFG*NGFSEKQRSKYEVL Trigger: TAACACCTCATATTTGCTTCTCTGCTTCTCTGAGAAGCCATTCCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR TCA 90 bp | TCCAGACTCTTCTCTGTGACTCAGGAGAGACTTAAGAACAAATTCTaGCTTGAAACGTATTTGTCAGATTATGGTATTAGTACAATTAGT | + |
Preference number: 1 (lower is better) Translates to: SRLFSVTQERLKNKF*LETYLSDYGISTIS Trigger: ACTAATTGTACTAATACCATAATCTGACAAATACGTTTCAAGTCAGAATTTGTTCTTAAGTCTCTCCTGAGTCACAGAGAAGAGTCTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 90 bp | GGTGCCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTaGCCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTCACAGCCCAG | + |
Preference number: 2 (lower is better) Translates to: GALQHLQGQGSHNIS*PGNGAGSLQGFTAQ Trigger: CTGGGCTGTGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR GCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCGCACTGGGGCTCAGGTaGCCACCACCACTCCTGCCT | + |
Preference number: 2 (lower is better) Translates to: PETLSPSTHQCCAKLRPIALGLR*PPPLLP Trigger: AGGCAGGAGTGGTGGTGGGCACCTGAGCCCCAGTGC...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 90 bp | TTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTaGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGA | + |
Preference number: 2 (lower is better) Translates to: LLRSAPGRTPSPAEW*FSGGAETLYPGRPR Trigger: TCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | ATCCAGGGCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGACACCTCTCAGGACTaGGTGGTTTCCCAACACCTG | + |
Preference number: 2 (lower is better) Translates to: IQGLTTERTRSYTFSSGVDTSQD*VVSQHL Trigger: CAGGTGTTGGGAAACCACTCAGTCCTGAGAGGTGTC...CACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGCCCTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | CGTTCACCACACCGTGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTGAAAGCCCCAGAGCAAGATaGGAGAGTGGGGCAAGGTCT | + |
Preference number: 2 (lower is better) Translates to: RSPHRGPVDSSVRCTRPESPRAR*ESGARS Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTGGGGCT...TTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCACGGTGTGGTGAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCATTTATGCAGCCCCTaGACTAGCTCCCCCTGCTCC | + |
Preference number: 2 (lower is better) Translates to: NEFTMLLGWLSSEPPGAAHLCSP*TSSPCS Trigger: GGAGCAGGGGGAGCTAGTTCAGGGGCTGCATAAATG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR CCA 90 bp | GGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGAGAAGCAAGATGAGAGAGTaGGGCAAGGTCTCCGCTGGC | + |
Preference number: 2 (lower is better) Translates to: GVVVFRGRRNSIPWQAARSKMRE*GKVSAG Trigger: GCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCT...TCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CCA 90 bp | ATGGGTGGTGATCCGAGTCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTTCAGCTTGCCGGGCAATaGCGCTGGCTCGCTCCAGGG | + |
Preference number: 2 (lower is better) Translates to: MGGDPSPGGTGIGKQLQFQLAGQ*RWLAPG Trigger: CCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTG...AAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGACTCGGATCACCACCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CCA 90 bp | TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACTACGGAGCGCACCAGGGCTGCTGCGGTGCAGTaGGCTATCATGAACCCAGAA | + |
Preference number: 2 (lower is better) Translates to: SGAMKRSFIQGLTTERTRAAAVQ*AIMNPE Trigger: TTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGC...CCTGGTGCGCTCCGTAGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 90 bp | GTGATCCGAGTCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTaGCCCACGGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGC | + |
Preference number: 2 (lower is better) Translates to: VIRVQEGPESESNFN*PTVRSDSMDVGIEG Trigger: GCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGACTCGGATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGGGCTGGCTGAGCAGTaGGCCCCCAGGAGCTGCCTG | + |
Preference number: 2 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTGLAEQ*APRSCL Trigger: CAGGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR TCA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGACCCCTGTAGTCTGTaGCCAGCTCGGGGTGCTGGC | + |
Preference number: 2 (lower is better) Translates to: VNSQEAMFLQIAALTIHHDPCSL*PARGAG Trigger: GCCAGCACCCCGAGCTGGTCACAGACTACAGGGGTC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR CCA 90 bp | TCCGGGGCCATGAAGCGATCTTTTATCCAGGGCCTTACTACGGAGCGCACCAGGAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCA | + |
Preference number: 2 (lower is better) Translates to: SGAMKRSFIQGLTTERTRRNSIP*QAARSS Trigger: TGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCT...CCTGGTGCGCTCCGTAGTAAGGCCCTGGATAAAAGATCGCTTCATGGCCCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CCA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATAGGCAGGCAGTGGGTTaGCCCCCATCCCCACCCTCA | + |
Preference number: 2 (lower is better) Translates to: VNSQEAMFLQIAALTIHHRQAVG*PPSPPS Trigger: TGAGGGTGGGGATGGGGGCCAACCCACTGCCTGCCT...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR TCA 90 bp | CAGGCCCATCTGATGTGCCTGTCCTCGAGGAAGCCCGTTAAAGATCGTCAGACTTCTTTCCTTCTCCGATaGGCCCCAGAGCAAGATGAG | + |
Preference number: 2 (lower is better) Translates to: QAHLMCLSSRKPVKDRQTSFLLR*APEQDE Trigger: CTCATCTTGCTCTGGGGCTCATCGGAGAAGGAAAGA...AGTCTGACGATCTTTAACGGGCTTCCTCGAGGACAGGCACATCAGATGGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | CTCCCCTCGACTGGCAAAGACCATAGGATTGTCTGTGGCGCTGTTCAGTTCTGTATTTCTGATGGGTGGTaGTCCGAGTCCAGGAGGGAC | + |
Preference number: 2 (lower is better) Translates to: LPSTGKDHRIVCGAVQFCISDGW*SESRRD Trigger: GTCCCTCCTGGACTCGGATCACCACCCATCAGAAAT...ACAGAACTGAACAGCGCCACAGACAATCCTATGGTCTTTGCCAGTCGAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | GGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGAGAATGGAAGTTTCCTCCTaGAATTGTCTCCCCTCGACT | + |
Preference number: 2 (lower is better) Translates to: GVVVFRGRRNSIPWQAARMEVSS*NCLPST Trigger: AGTCGAGGGGAGACAATTTCAGGAGGAAACTTCCAT...TCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CCA 90 bp | CGTTCACCACACCGTGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTGAACGATCGCAGAACCTGTaGCTTTCTGCGATTTCTGAT | + |
Preference number: 2 (lower is better) Translates to: RSPHRGPVDSSVRCTRPERSQNL*LSAISD Trigger: ATCAGAAATCGCAGAAAGCCACAGGTTCTGCGATCG...TTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCACGGTGTGGTGAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR GCA 90 bp | GTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGCAGGCCGCGAGAAGCTCAAACATATTTAGCATCTaGCCAGCCACTCTTCGGGGA | + |
Preference number: 2 (lower is better) Translates to: VVFRGRRNSIPWQAARSSNIFSI*PATLRG Trigger: TCCCCGAAGAGTGGCTGGGCAGATGCTAAATATGTT...TGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR GCA 90 bp | AAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATTTGAGGGCTTTCCTGGCTaGCCATCCTCCCATGGAGAC | + |
Preference number: 2 (lower is better) Translates to: KRCWRKRSGFRNVLHSVFEGFPG*PSSHGD Trigger: GTCTCCATGGGAGGATGGGCAGCCAGGAAAGCCCTC...AAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 90 bp | CGCTCCAGGGCTTCACAGCCCAGGGAAGTGATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCTTTTGGTTTCAAGACAATTGGTTTC | + |
Preference number: 2 (lower is better) Translates to: RSRASQPREVIICVP*MSARPSFGFKTIGF Trigger: GAAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCACTCATCAATGGGACACAGATGATCACTTCCCTGGGCTGTGAAGCCCTGGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CCA 90 bp | TTCGGAGAGATTCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAACCTCCCATGGAGACGTaGTCTTCTGTAGCAGCACTG | + |
Preference number: 2 (lower is better) Translates to: FGEILVKTLLEKAVWIPEPPMET*SSVAAL Trigger: CAGTGCTGCTACAGAAGACCACGTCTCCATGGGAGG...TTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTCTCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 90 bp | TGGACAGGAGCCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTaGCTGGAGTCATTGCCCACTTGGGTGCAAGAATACATAAGTTGT | + |
Preference number: 2 (lower is better) Translates to: WTGAQHFQNRSESRN*LESLPTWVQEYISC Trigger: ACAACTTATGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR TCA 90 bp | TTGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATTTCTCGATGTTCAATTTGCCCACGGTaGGGTCGGACAGCATGGATG | + |
Preference number: 2 (lower is better) Translates to: LEKAVWIPECAPFCISRCSICPR*GRTAWM Trigger: CATCCATGCTGTCCGACCTCACCGTGGGCAAATTGA...ACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CCA 90 bp | ACCAGGGCTGCTGCGGTGCAGTGGGCTATCATGAACCCAGAATTGAGACCTCCTTGCCAGGCCTTCTTTTaGTTTCAAGACAATTGGTTT | + |
Preference number: 2 (lower is better) Translates to: TRAAAVQWAIMNPELRPPCQAFF*FQDNWF Trigger: AAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCA...AGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGCCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR TCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGATTACAGGCAGTTCCTaGGACTCTCTCTCCATCAAC | + |
Preference number: 2 (lower is better) Translates to: SMEVLANRNPFLHSCFGWITGSS*DSLSIN Trigger: GTTGATGGAGAGAGAGTCTCAGGAACTGCCTGTAAT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR CCA 90 bp | AAACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATTTTCCACAGATGAAGGGTaGCACAGAGCCTTGCTCTCA | + |
Preference number: 2 (lower is better) Translates to: KRCWRKRSGFRNVLHSVFSTDEG*HRALLS Trigger: TGAGAGCAAGGCTCTGTGCCACCCTTCATCTGTGGA...AAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 90 bp | CAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTTGCTGGAGTCATaGCCCACTTGGGTGCAAGAATACATAAGTTGTGTGTGTGTGCAT | + |
Preference number: 2 (lower is better) Translates to: QHFQNRSESRNLLES*PTWVQEYISCVCVH Trigger: ATGCACACACACACAACTTATGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR CCA 90 bp | GAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGCGGTATCGAAGGCTTTaGTGGTGCCCTTCAGCACCT | + |
Preference number: 2 (lower is better) Translates to: EGLHSLSILLSLIAASSWRYRRL*WCPSAP Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCG...CCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 90 bp | GGATTGTGGCTGAGTTCTTTCGGAGAGATTCTAGTGAAAACGCTGTaGGAGAAAGCGGTCTGGATTCCGGAATGTGCTCCATTCTGTATT | + |
Preference number: 2 (lower is better) Translates to: GLWLSSFGEILVKTL*EKAVWIPECAPFCI Trigger: AATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTCTCCGAAAGAACTCAGCCACAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR CCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCATTGGTTTCAGTCCATaGGCTTCTAGAACATATTTA | + |
Preference number: 2 (lower is better) Translates to: PETLSPSTHQCCAKLRPIIGFSP*ASRTYL Trigger: TAAATATGTTCTAGAAGCCCATGGACTGAAACCAAT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR CAA 90 bp | GCAGTCTTTCCAGCCATGCTCTCAGAATCGTGCACATGCAGTGTTTaGCACTTGTTTACCACAATGGGCACAAAGTCATTAATCTTAGCC | + |
Preference number: 2 (lower is better) Translates to: AVFPAMLSESCTCSV*HLFTTMGTKSLILA Trigger: GGCTAAGATTAATGACTTTGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCATGGCTGGAAAGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR CAA 90 bp | ATAATGGCGACAGGTCTCAGTCTTCGACTTCCCACGTGGCTTGTGTaGGTCACTAGGGAATCAGCAAAAATACTAACAGAAGTTTTGGAG | + |
Preference number: 2 (lower is better) Translates to: IMATGLSLRLPTWLV*VTRESAKILTEVLE Trigger: CTCCAAAACTTCTGTTAGTATTTTTGCTGATTCCCTAGTGACCAACACAAGCCACGTGGGAAGTCGAAGACTGAGACCTGTCGCCATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR TCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACTCTCTCTCTCTGTGTaGGAGAGAGATTGCTTGATT | + |
Preference number: 2 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTLSLSV*ERDCLI Trigger: AATCAAGCAATCTCTCTCTCACACAGAGAGAGAGAG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGTACAAAACCGAGGGATaGAATAATGTCAAAGGAAGG | + |
Preference number: 2 (lower is better) Translates to: SMEVLANRNPFLHSCFGWYKTEG*NNVKGR Trigger: CCTTCCTTTGACATTATTCCATCCCTCGGTTTTGTA...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR TCA 90 bp | CTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGACACCAATGGCCAAACTTTGGCTAAGACGTTaGTCCTCAAAGCCAAGAGCA | + |
Preference number: 2 (lower is better) Translates to: LSILLSLIAASSWTPMAKLWLRR*SSKPRA Trigger: TGCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAG...TTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR TCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTAAGCTCAGGCCCATCTaGTGTGCCTGTCCTCGAGGA | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLKLRPI*CACPRG Trigger: TCCTCGAGGACAGGCACATCAGATGGGCCTGAGCTT...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR GCA 90 bp | GCTTCTAGAACATATTTAGCATCTGCCCAGCCACTCTTCGGGGACCACATCTTTGCAGGAGGCATTAAATaGTTCAATAACTTGTTTCAG | + |
Preference number: 2 (lower is better) Translates to: ASRTYLASAQPLFGDHIFAGGIK*FNNLFQ Trigger: CTGAAACAAGTTATTGAAGCATTTAATGCCTCCTGC...AAAGATGTGGTCCCCGAAGAGTGGCTGGGCAGATGCTAAATATGTTCTAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR GCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTGGAGGACTTCGTGCTTaGTTGAGGGCTCACCTTCTC | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLGGLRA*LRAHLL Trigger: GAGAAGGTGAGCCCTCAAGCAAGCACGAAGTCCTCC...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CCA 90 bp | GAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGTGGTTTCAAGACAATTaGTTTCAGTCCATGGGCTTC | + |
Preference number: 2 (lower is better) Translates to: EGLHSLSILLSLIAASSWWFQDN*FQSMGF Trigger: GAAGCCCATGGACTGAAACCAATTGTCTTGAAACCA...CCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR GCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAAATGTCTTCTGTCAATaGCCACATCTTTTTGTTTGT | + |
Preference number: 2 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTNVFCQ*PHLFVC Trigger: ACAAACAAAAAGATGTGGGCATTGACAGAAGACATT...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR GCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTGTGAGAGCAGGAACTTaGTGGAGTCATTGCCCACTT | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLVRAGT*WSHCPL Trigger: AAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCAC...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCCTCCATTCCTGCTTTaGCTGGAATGGCTTCTCAGA | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLPPFLL*LEWLLR Trigger: TCTGAGAAGCCATTCCAGCCAAAGCAGGAATGGAGG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR TCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCTTCACTTGATAACCTaGCACAGCTTGGAGTCAACT | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLLHLIT*HSLEST Trigger: AGTTGACTCCAAGCTGTGTCAGGTTATCAAGTGAAG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTAATCGAAGAACACAATaGAGCAAGCCACTGACACAG | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLNRRTQ*SKPLTQ Trigger: CTGTGTCAGTGGCTTGCTCCATTGTGTTCTTCGATT...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR GCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTGCACATGCAGTGTTTTaGACTTGTTTACCACAATGG | + |
Preference number: 2 (lower is better) Translates to: FINWVDYLIMATGLSLRLAHAVF*TCLPQW Trigger: CCATTGTGGTAAACAAGTGCAAAACACTGCATGTGC...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR CCA 72 bp | GGGTCAAGGCAGCCACAATATCAGCTTGCCGGGCAATaGCGCTGGCTCGCTCCAGGGCTTCACAGCCCAGGG | + |
Preference number: 3 (lower is better) Translates to: GSRQPQYQLAGQ*RWLAPGLHSPG Trigger: CCCTGGGCTGTGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | AGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTaGCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTCA | + |
Preference number: 3 (lower is better) Translates to: STSRVKAATISA*RAMALARSRAS Trigger: TGAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | TTCCACGTGCTCGACGACCCTGAGGGCTTTCCTGGCTaGCCATCCTCCCATGGAGACGTGGTCTTCTGTAGC | + |
Preference number: 3 (lower is better) Translates to: FHVLDDPEGFPG*PSSHGDVVFCS Trigger: GCTACAGAAGACCACGTCTCCATGGGAGGATGGGCAGCCAGGAAAGCCCTCAGGGTCGTCGAGCACGTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | GCCGCGAGAAGCTCAATGGCTAGCACTTGTTCCACGTaGTCGACGACCCTGAGGGCTTTCCTGGCTGCCCAT | + |
Preference number: 3 (lower is better) Translates to: AARSSMASTCST*STTLRAFLAAH Trigger: ATGGGCAGCCAGGAAAGCCCTCAGGGTCGTCGAGCACGTGGAACAAGTGCTAGCCATTGAGCTTCTCGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR CCA 72 bp | GAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTaGTGGTGCCCTTCAGCACCTCCAGGGTCAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: EVGQHGCRYRRL*WCPSAPPGSRQ Trigger: CTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR TCA 72 bp | CACATCTTTCCTTCTCCGATGAGCCCCAGAGCAAGATaGGAGAGTGGGGCAAGGTCTCCGCTGGCACCCACA | + |
Preference number: 3 (lower is better) Translates to: HIFPSPMSPRAR*ESGARSPLAPT Trigger: TGTGGGTGCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCTCTGGGGCTCATCGGAGAAGGAAAGATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | GGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTaGCCTTCAGCACCTCCAGGGTCAAGGCAGCCACAA | + |
Preference number: 3 (lower is better) Translates to: GQHGCRYRRLWW*PSAPPGSRQPQ Trigger: TTGTGGCTGCCTTGACCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR CCA 72 bp | CGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCT | + |
Preference number: 3 (lower is better) Translates to: RSAPGRTPSPAE*LFSGGAETLYP Trigger: AGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR TCA 72 bp | GGGCTGGACAGGAGCCCAGCACTTCCAAAACAGGAGTaGGAGCAGGAACTTGCTGGAGTCATTGCCCACTTG | + |
Preference number: 3 (lower is better) Translates to: GLDRSPALPKQE*EQELAGVIAHL Trigger: CAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGCTCCTGTCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR CCA 72 bp | GCCTTGCTCTCAGACACCAGGGCTGCTGCGGTGCAGTaGGCTATCATGAACCCAGAATTGAGACCTCCTTCA | + |
Preference number: 3 (lower is better) Translates to: ALLSDTRAAAVQ*AIMNPELRPPS Trigger: TGAAGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGCCCTGGTGTCTGAGAGCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR-3UTR CAA 90 bp | CTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTGCCGGGCAATGGCCCTTTGGCTAAGACGTaGATCCTCAAAGCCAAGAGC | + |
Preference number: 3 (lower is better) Translates to: LQHLQGQGSHNISLPGNGPLAKT*ILKAKS Trigger: GCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAGG...GCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR TCA 72 bp | TGGACCTGTGGACAGCAGCGTAAGGTGTACGCGTCCTaGACACGATCGCAGAACCTGTGGCTTTCTGCGATT | + |
Preference number: 3 (lower is better) Translates to: WTCGQQRKVYAS*TRSQNLWLSAI Trigger: AATCGCAGAAAGCCACAGGTTCTGCGATCGTGTTCAGGACGCGTACACCTTACGCTGCTGTCCACAGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR CCA 72 bp | CCAGAGCAAGATGAGAGAGTGGGGCAAGGTCTCCGCTaGCACCCACAGTTCCTTTCTCTGGAACATAGGACA | + |
Preference number: 3 (lower is better) Translates to: PEQDERVGQGLR*HPQFLSLEHRT Trigger: TGTCCTATGTTCCAGAGAAAGGAACTGTGGGTGCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 72 bp | GTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCAATGGCTAGCACTTGT | + |
Preference number: 3 (lower is better) Translates to: VVVFRGRRNSIP*QAARSSMASTC Trigger: ACAAGTGCTAGCCATTGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR TCA 72 bp | GACCGGAATCGGAAAGCAACTTCAATTTGCCCACGGTaGGGTCGGACAGCATGGATGTCGGTATCGAAGGCT | + |
Preference number: 3 (lower is better) Translates to: DRNRKATSICPR*GRTAWMSVSKA Trigger: AGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR TCA 72 bp | TCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTaGTGTGCCTGTCCTCGAGGAAGCCCGTTAAAGATC | + |
Preference number: 3 (lower is better) Translates to: STHQCCAKLRPI*CACPRGSPLKI Trigger: GATCTTTAACGGGCTTCCTCGAGGACAGGCACATCAGATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | ACAGGAGGTAGGCGTGGAGCCCAGTGCCAGAGAGCATaGACACAACACACACAAGATCCTAGCTTCCATTTC | + |
Preference number: 3 (lower is better) Translates to: TGGRRGAQCQRA*TQHTQDPSFHF Trigger: GAAATGGAAGCTAGGATCTTGTGTGTGTTGTGTGCATGCTCTCTGGCACTGGGCTCCACGCCTACCTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CAA 90 bp | AGGGCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTTGTTGGTTTCAAGACAATaGGTTTCAGTCCATGGGCTT | + |
Preference number: 3 (lower is better) Translates to: RALLRSAPGRTPSPAEWLLVSRQ*VSVHGL Trigger: AAGCCCATGGACTGAAACCAATTGTCTTGAAACCAA...CAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR TCA 72 bp | TCCTCAAAGCCAAGAGCATCCGACACCTCTCAGGACTaGGTGGTTTCCCAACACCTGAAGAATGGGAACGGA | + |
Preference number: 3 (lower is better) Translates to: SSKPRASDTSQD*VVSQHLKNGNG Trigger: TCCGTTCCCATTCTTCAGGTGTTGGGAAACCACTCAGTCCTGAGAGGTGTCGGATGCTCTTGGCTTTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR CAA 90 bp | CCCACGGTGAGGTCGGACAGCATGGATGTCGGTATCGAAGGCTTTGGTGGTGCCAAATGCTTCAATAACTaGTTTCAGCGTCTCCAAGGA | + |
Preference number: 3 (lower is better) Translates to: PTVRSDSMDVGIEGFGGAKCFNN*FQRLQG Trigger: TCCTTGGAGACGCTGAAACAAGTTATTGAAGCATTT...GGCACCACCAAAGCCTTCGATACCGACATCCATGCTGTCCGACCTCACCGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR CAA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGGGAGAGATATGGAGATaGGGCAATACACCCGAGGGC | + |
Preference number: 3 (lower is better) Translates to: SMEVLANRNPFLHSCFGWGEIWR*GNTPEG Trigger: GCCCTCGGGTGTATTGCCCAATCTCCATATCTCTCC...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CAA 90 bp | GGAAAGCAACTTCAATTTGCCCACGGTGAGGTCGGACAGCATGGATGTCGGTATATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCT | + |
Preference number: 3 (lower is better) Translates to: GKQLQFAHGEVGQHGCRYIICVP*MSARPS Trigger: AGAAGGCCTGGCACTCATCAATGGGACACAGATGAT...ATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR-3UTR CAA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCTTGATGATGGAGATTaGGATCCTCACATTTATGCA | + |
Preference number: 3 (lower is better) Translates to: NEFTMLLGWLSSEPPGAALDDGD*DPHIYA Trigger: TGCATAAATGTGAGGATCCAAATCTCCATCATCAAG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR GCA 72 bp | AACCTCCCAAACCTTTTGGTCAAGAAGCAACCTGTGTaGTGCCTCAATGTCCGGGGCCATGAAGCGATCTTT | + |
Preference number: 3 (lower is better) Translates to: NLPNLLVKKQPV*CLNVRGHEAIF Trigger: AAAGATCGCTTCATGGCCCCGGACATTGAGGCAGCACACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | AACGCTGTTGGAGAAAGCGGTCTGGATTCCGGAATGTaGTCCATTCTGTATTTCTCGATGTACGGTGCGGCA | + |
Preference number: 3 (lower is better) Translates to: NAVGESGLDSGM*SILYFSMYGAA Trigger: TGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | CCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTTaGTGGAGTCATTGCCCACTTGGGTGCAAGAATACA | + |
Preference number: 3 (lower is better) Translates to: PSTSKTGVRAGT*WSHCPLGCKNT Trigger: TGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR GCA 72 bp | CGGAATGTGCTCCATTCTGTATTTCTCGATGTACGGTaGGGCAACCTCCCAAACCTTTTGGTCAAGAAGCAA | + |
Preference number: 3 (lower is better) Translates to: RNVLHSVFLDVR*GNLPNLLVKKQ Trigger: TTGCTTCTTGACCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCACATTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | ACAAGATCAGGGCTCTGGGTTCAGCCACTGCATTGCTaGCATGGCCTATCCAGAGTATGTTTGAAAAGAGAT | + |
Preference number: 3 (lower is better) Translates to: TRSGLWVQPLHC*HGLSRVCLKRD Trigger: ATCTCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR GCA 72 bp | GCAGTCTTTCCAGCCATGCTCTCAGAATCGTGCACATaGAGTGTTTTGCACTTGTTTACCACAATGGGCACA | + |
Preference number: 3 (lower is better) Translates to: AVFPAMLSESCT*SVLHLFTTMGT Trigger: TGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCATGGCTGGAAAGACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR CCA 72 bp | GTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTaGCTGGAATGGCTTCTCAGAGAAGCAGAGAAGCAA | + |
Preference number: 3 (lower is better) Translates to: VSQQKPFPPFLL*LEWLLREAEKQ Trigger: TTGCTTCTCTGCTTCTCTGAGAAGCCATTCCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR-3UTR CAA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATTGCACATGCAGTGTTTaGCACTTGTTTACCACAATG | + |
Preference number: 3 (lower is better) Translates to: VNSQEAMFLQIAALTIHHCTCSV*HLFTTM Trigger: CATTGTGGTAAACAAGTGCAAAACACTGCATGTGCA...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR GCA 72 bp | GCCCAGGGAAGTGATCATCTGTGTCCCATTGATGAGTaGCAGGCCTTCTTTTGGTTTCAAGACAATTGGTTT | + |
Preference number: 3 (lower is better) Translates to: AQGSDHLCPIDE*QAFFWFQDNWF Trigger: AAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCACTCATCAATGGGACACAGATGATCACTTCCCTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR GCA 72 bp | AAAACAAGATCAGGGCTCTGGGTTCAGCCACTGCATTaGTGCCATGGCCTATCCAGAGTATGTTTGAAAAGA | + |
Preference number: 3 (lower is better) Translates to: KTRSGLWVQPLH*CHGLSRVCLKR Trigger: TCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CCA 72 bp | AGGAAGCCCGTTAAAGATCGTCAGACTCTGGGATTGTaGCTGAGTTCTTTCGGAGAGATTCTAGTGAAAACG | + |
Preference number: 3 (lower is better) Translates to: RKPVKDRQTLGL*LSSFGEILVKT Trigger: CGTTTTCACTAGAATCTCTCCGAAAGAACTCAGCCACAATCCCAGAGTCTGACGATCTTTAACGGGCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 72 bp | AGTGAGAGCAGGAACTTGCTGGAGTCATTGCCCACTTaGGTGCAAGAATACATAAGTTGTGTGTGTGTGCAT | + |
Preference number: 3 (lower is better) Translates to: SESRNLLESLPT*VQEYISCVCVH Trigger: ATGCACACACACACAACTTATGTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CCA 72 bp | GAGATTCTAGTGAAAACGCTGTTGGAGAAAGCGGTCTaGATTCCGGAATGTGCTCCATTCTGTATTTCTCGA | + |
Preference number: 3 (lower is better) Translates to: EILVKTLLEKAV*IPECAPFCISR Trigger: TCGAGAAATACAGAATGGAGCACATTCCGGAATCCAGACCGCTTTCTCCAACAGCGTTTTCACTAGAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
||
3UTR CCA 72 bp | TGGCAATGTTTGCAAAGGATTATCTTGATTGATAACTaGTGTGGGAAGGTCCAACCCACTATGGGTGGCATC | + |
Preference number: 3 (lower is better) Translates to: WQCLQRIILIDN*CGKVQPTMGGI Trigger: GATGCCACCCATAGTGGGTTGGACCTTCCCACACCAGTTATCAATCAAGATAATCCTTTGCAAACATTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR TCA 72 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTaGGAGAGAGATTGCTTGATTGATAGTGTATGTGAC | + |
Preference number: 3 (lower is better) Translates to: SLSLSLSLSLSV*ERDCLIDSVCD Trigger: GTCACATACACTATCAATCAAGCAATCTCTCTCTCACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR TCA 72 bp | AGATTGGCCTGTGGCAATGTTTGCAAAGGATTATCTTaGTTGATAACTGGTGTGGGAAGGTCCAACCCACTA | + |
Preference number: 3 (lower is better) Translates to: RLACGNVCKGLS*LITGVGRSNPL Trigger: TAGTGGGTTGGACCTTCCCACACCAGTTATCAATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR GCA 72 bp | AGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACCAATGGCCAAATAGTC | + |
Preference number: 3 (lower is better) Translates to: RITQPFDSSFTN*RKFMDTNGQIV Trigger: GACTATTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CCA 72 bp | ACTGGGACAATTCAACTGGGACTACCTAGATCAGATTaGCCTGTGGCAATGTTTGCAAAGGATTATCTTGAT | + |
Preference number: 3 (lower is better) Translates to: TGTIQLGLPRSD*PVAMFAKDYLD Trigger: ATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCTGATCTAGGTAGTCCCAGTTGAATTGTCCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR-3UTR CAA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTAGTGAGAGCAGGAACTaGCTGGAGTCATTGCCCACT | + |
Preference number: 3 (lower is better) Translates to: FINWVDYLIMATGLSLRLSESRN*LESLPT Trigger: AGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACT...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CCA 72 bp | TCAGCCCATGGTCTAAGACCTGTTAATCTTTCTGATTaGATCTTTCAGAAGCTTGGGAAAAGAGATAGAGGT | + |
Preference number: 3 (lower is better) Translates to: SAHGLRPVNLSD*IFQKLGKRDRG Trigger: ACCTCTATCTCTTTTCCCAAGCTTCTGAAAGATCCAATCAGAAAGATTAACAGGTCTTAGACCATGGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
3UTR TCA 72 bp | CAATGGAGCAAGCCACTGACACAGTTTGTAACCCGATaGCCATATATATATACTCTTGAACTAACAAAGCTG | + |
Preference number: 3 (lower is better) Translates to: QWSKPLTQFVTR*PYIYTLELTKL Trigger: CAGCTTTGTTAGTTCAAGAGTATATATATATGGTCATCGGGTTACAAACTGTGTCAGTGGCTTGCTCCATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CCA 72 bp | CAATTCAACTGGGACTACCTAGATCAGATTGGCCTGTaGCAATGTTTGCAAAGGATTATCTTGATTGATAAC | + |
Preference number: 3 (lower is better) Translates to: QFNWDYLDQIGL*QCLQRIILIDN Trigger: GTTATCAATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCTGATCTAGGTAGTCCCAGTTGAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR TCA 72 bp | ACAGTTTGTAACCCGATGACCATATATATATACTCTTaGACTAACAAAGCTGTATACAAAACCGAGGGATGG | + |
Preference number: 3 (lower is better) Translates to: TVCNPMTIYIYS*TNKAVYKTEGW Trigger: CCATCCCTCGGTTTTGTATACAGCTTTGTTAGTTCAAGAGTATATATATATGGTCATCGGGTTACAAACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR TCA 72 bp | TTCTCTGTGACTCAGGAGAGACTTAAGAACAAATTCTaGCTTGAAACGTATTTGTCAGATTATGGTATTAGT | + |
Preference number: 3 (lower is better) Translates to: FSVTQERLKNKF*LETYLSDYGIS Trigger: ACTAATACCATAATCTGACAAATACGTTTCAAGTCAGAATTTGTTCTTAAGTCTCTCCTGAGTCACAGAGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | CAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTaGCCGGGCAATGGCGCTGGCTCGCTCCAGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: QHLQGQGSHNIS*PGNGAGSLQGF Trigger: GAAGCCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR CCA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCAGCTTGCCGGGCAATaGCGCTGGCTCGCTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: NEFTMLLGWLSSEPPGAAQLAGQ*RWLAPG Trigger: CCCTGGAGCGAGCCAGCGCCATTGCCCGGCAAGCTG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | GCTGCTGCGGTGCAGTGGGCTATCATGAACCCAGAATaGAGACCTCCTTCAGCCACCAGGAAGGCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: AAAVQWAIMNPE*RPPSATRKAGS Trigger: GCTGCCTGCCTTCCTGGTGGCTGAAGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR TCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCAT | + |
Preference number: 4 (lower is better) Translates to: PETLSPSTHQCCAKLRPIVSFPS*QGTASH Trigger: ATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCAC...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCAAGAAGCAACCTGTGTaGTGCCTCAATGTCCGGGGC | + |
Preference number: 4 (lower is better) Translates to: NEFTMLLGWLSSEPPGAAKKQPV*CLNVRG Trigger: GCCCCGGACATTGAGGCAGCACACAGGTTGCTTCTT...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCGCTGCTGCGGTGCAGTaGGCTATCATGAACCCAGAA | + |
Preference number: 4 (lower is better) Translates to: NEFTMLLGWLSSEPPGAAAAAVQ*AIMNPE Trigger: TTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGC...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | AGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTaGTTTTCAGGGGGCGCAGAAACTCTATACCCTGGC | + |
Preference number: 4 (lower is better) Translates to: SAPGRTPSPAEW*FSGGAETLYPG Trigger: GCCAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR TCA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCCTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTT | + |
Preference number: 4 (lower is better) Translates to: NEFTMLLGWLSSEPPGAALHPPK*SHHCPV Trigger: AACCGGACAATGGTGGCTTCACTTCGGTGGATGAAG...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | GTCCAGGAGGGACCGGAATCGGAAAGCAACTTCAATTaGCCCACGGTGAGGTCGGACAGCATGGATGTCGGT | + |
Preference number: 4 (lower is better) Translates to: VQEGPESESNFN*PTVRSDSMDVG Trigger: ACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCCGATTCCGGTCCCTCCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR GCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCAAGCAACCTGTGTGCTaGCTCAATGTCCGGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: PETLSPSTHQCCAKLRPIKQPVC*LNVRGH Trigger: ATGGCCCCGGACATTGAGGCAGCACACAGGTTGCTT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGAGGGCTTTCCTGGCTaGCCATCCTCCCATGGAGAC | + |
Preference number: 4 (lower is better) Translates to: VNSQEAMFLQIAALTIHHEGFPG*PSSHGD Trigger: GTCTCCATGGGAGGATGGGCAGCCAGGAAAGCCCTC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCAGAAACTCTATACCCTaGCAGGCCGCGAGAAGCTCA | + |
Preference number: 4 (lower is better) Translates to: PETLSPSTHQCCAKLRPIRNSIP*QAARSS Trigger: TGAGCTTCTCGCGGCCTGCCAGGGTATAGAGTTTCT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCGGGAACGGACTAAGTTaGCTTGAAGCTCCTGTAGCT | + |
Preference number: 4 (lower is better) Translates to: PETLSPSTHQCCAKLRPIGNGLS*LEAPVA Trigger: AGCTACAGGAGCTTCAAGTCAACTTAGTCCGTTCCC...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGGGCAAGGTCTCCGCTaGCACCCACAGTTCCTTTCT | + |
Preference number: 4 (lower is better) Translates to: VNSQEAMFLQIAALTIHHGQGLR*HPQFLS Trigger: AGAAAGGAACTGTGGGTGCCAGCGGAGACCTTGCCC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | GCCCAGCACTTCCAAAACAGGAGTGAGAGCAGGAACTaGCTGGAGTCATTGCCCACTTGGGTGCAAGAATAC | + |
Preference number: 4 (lower is better) Translates to: AQHFQNRSESRN*LESLPTWVQEY Trigger: GTATTCTTGCACCCAAGTGGGCAATGACTCCAGCAAGTTCCTGCTCTCACTCCTGTTTTGGAAGTGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | CTGTTCAGTTCTGTAGTGATGATGTCCTTCACAAAGGCTATTGTGTCGTTCACCGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCAT | + |
Preference number: 4 (lower is better) Translates to: LFSSVVMMSFTKAIVSFTVSFPS*QGTASH Trigger: ATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCAC...GGTGAACGACACAATAGCCTTTGTGAAGGACATCATCACTACAGAACTGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR TCA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCTTCCAAAACCTGTGGTaGTGCCATAAACAACTGTTC | + |
Preference number: 4 (lower is better) Translates to: NEFTMLLGWLSSEPPGAAFQNLW*CHKQLF Trigger: GAACAGTTGTTTATGGCATCACCACAGGTTTTGGAA...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGATTTCTGATGGGTGGTaGTCCGAGTCCAGGAGGGAC | + |
Preference number: 4 (lower is better) Translates to: SMEVLANRNPFLHSCFGWISDGW*SESRRD Trigger: GTCCCTCCTGGACTCGGATCACCACCCATCAGAAAT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAAGGCAGGCAGCTCGCTaGGGGAAGGATTACACAGCC | + |
Preference number: 4 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTRQAAR*GKDYTA Trigger: GGCTGTGTAATCCTTCCCTCAGCGAGCTGCCTGCCT...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAAGCCCCAGAGCAAGATaGGAGAGTGGGGCAAGGTCT | + |
Preference number: 4 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTSPRAR*ESGARS Trigger: AGACCTTGCCCCACTCTCTCATCTTGCTCTGGGGCT...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATGCTTTCTGCGATTTCTaGTGGGTGGTGATCCGAGTC | + |
Preference number: 4 (lower is better) Translates to: VNSQEAMFLQIAALTIHHAFCDF*WVVIRV Trigger: GACTCGGATCACCACCCATCAGAAATCGCAGAAAGC...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAGCAGGCCCAGGCCCTTaGACCGATGCACAAGGAATT | + |
Preference number: 4 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTAGPGP*TDAQGI Trigger: AATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGC...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | CACCTTCTCCAGCGGAGTGGTTGTTTTCAGGGGGCGCAGAAACTCTATACCCTGAAAACTCCTTCTGGCTaGGACGGAATGAAATCAGGA | + |
Preference number: 4 (lower is better) Translates to: HLLQRSGCFQGAQKLYTLKTPSG*DGMKSG Trigger: TCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTT...CAGGGTATAGAGTTTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR GCA 90 bp | GGAAAGCAACTTCAATTTGCCCACGGTGAGGTCGGACAGCATGGATGTCGGTATACCTCCCGGGACTGCTaGACTTTCTTCTCAGCAATT | + |
Preference number: 4 (lower is better) Translates to: GKQLQFAHGEVGQHGCRYTSRDC*TFFSAI Trigger: AATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGT...ATACCGACATCCATGCTGTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 72 bp | TTTCTCGATGTACGGTGCGGCAACCTCCCAAACCTTTaGGTCAAGAAGCAACCTGTGTGCTGCCTCAATGTC | + |
Preference number: 4 (lower is better) Translates to: FLDVRCGNLPNL*VKKQPVCCLNV Trigger: GACATTGAGGCAGCACACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR TCA 90 bp | CTGTTCAGTTCTGTAGTGATGATGTCCTTCACAAAGGCTATTGTGTCGTTCACCGTCCCTTGCCCAGGTTaGCCAGATCCTCTGTGCTCA | + |
Preference number: 4 (lower is better) Translates to: LFSSVVMMSFTKAIVSFTVPCPG*PDPLCS Trigger: TGAGCACAGAGGATCTGGTCAACCTGGGCAAGGGAC...GGTGAACGACACAATAGCCTTTGTGAAGGACATCATCACTACAGAACTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR TCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACATCAATTTGCCCACGGTaGGGTCGGACAGCATGGATG | + |
Preference number: 4 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTSICPR*GRTAWM Trigger: CATCCATGCTGTCCGACCTCACCGTGGGCAAATTGA...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGACCTCCCGGGACTGCTaGACTTTCTTCTCAGCAATT | + |
Preference number: 4 (lower is better) Translates to: SMEVLANRNPFLHSCFGWTSRDC*TFFSAI Trigger: AATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACC | + |
Preference number: 4 (lower is better) Translates to: PETLSPSTHQCCAKLRPISSFTN*RKFMDT Trigger: GGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGA...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTAGCAAGATGAGAGAGTaGGGCAAGGTCTCCGCTGGC | + |
Preference number: 4 (lower is better) Translates to: KAPSTPQTIVTRKQDQGSSKMRE*GKVSAG Trigger: GCCAGCGGAGACCTTGCCCCACTCTCTCATCTTGCT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGGTCCAGGGCTTTGGCTaGGTATTCACCATGGAAGTT | + |
Preference number: 4 (lower is better) Translates to: SMEVLANRNPFLHSCFGWVQGFG*VFTMEV Trigger: AACTTCCATGGTGAATACCCAGCCAAAGCCCTGGAC...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | GCTTCACAGCCCAGGGAAGTGATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCTTTTGGTTTCAAGACA | + |
Preference number: 4 (lower is better) Translates to: ASQPREVIICVP*MSARPSFGFKT Trigger: TGTCTTGAAACCAAAAGAAGGCCTGGCACTCATCAATGGGACACAGATGATCACTTCCCTGGGCTGTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR TCA 90 bp | AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTGACACCTCTCAGGACTaGGTGGTTTCCCAACACCTG | + |
Preference number: 4 (lower is better) Translates to: KAPSTPQTIVTRKQDQGSDTSQD*VVSQHL Trigger: CAGGTGTTGGGAAACCACTCAGTCCTGAGAGGTGTC...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGCTTTGGCTAAGACGTTaGTCCTCAAAGCCAAGAGCA | + |
Preference number: 4 (lower is better) Translates to: SMEVLANRNPFLHSCFGWLWLRR*SSKPRA Trigger: TGCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAG...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
||
CDS-3UTR TCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACATCTTTCCTTCTCCGATaGGCCCCAGAGCAAGATGAG | + |
Preference number: 4 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTSFLLR*APEQDE Trigger: CTCATCTTGCTCTGGGGCTCATCGGAGAAGGAAAGA...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACAATGTCCGGGGCCATaGAGCGATCTTTTATCCAGG | + |
Preference number: 4 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTQCPGP*SDLLSR Trigger: CCTGGATAAAAGATCGCTTCATGGCCCCGGACATTG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | GAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGGCAGGCCCAGGCCCTTaGACCGATGCACAAGGAATT | + |
Preference number: 4 (lower is better) Translates to: EGLHSLSILLSLIAASSWAGPGP*TDAQGI Trigger: AATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGC...CCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR GCA 90 bp | TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCAGCACTTGTTCCACGTaGTCGACGACCCTGAGGGCT | + |
Preference number: 4 (lower is better) Translates to: FSFLEGWLKPVVNRTQMISTCST*STTLRA Trigger: AGCCCTCAGGGTCGTCGAGCACGTGGAACAAGTGCT...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACATATCGAAGGCTTTGGTaGTGCCCTTCAGCACCTCCA | + |
Preference number: 4 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTYRRLW*CPSAPP Trigger: TGGAGGTGCTGAAGGGCACCACCAAAGCCTTCGATA...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTCGGTATCGAAGGCTTTaGTGGTGCCCTTCAGCACCT | + |
Preference number: 4 (lower is better) Translates to: KAPSTPQTIVTRKQDQGSRYRRL*WCPSAP Trigger: AGGTGCTGAAGGGCACCACCAAAGCCTTCGATACCG...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACCCTTCTCCAGCGGAGTaGTTGTTTTCAGGGGGCGCA | + |
Preference number: 4 (lower is better) Translates to: SLFILSRKTTPQPQGTQYPSPAE*LFSGGA Trigger: TGCGCCCCCTGAAAACAACCACTCCGCTGGAGAAGG...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | GAAATTGTCTCCCCTCGACTGGCAAAGACCATAGGATaGTCTGTGGCGCTGTTCAGTTCTGTAGTGATGATG | + |
Preference number: 4 (lower is better) Translates to: EIVSPRLAKTIG*SVALFSSVVMM Trigger: CATCATCACTACAGAACTGAACAGCGCCACAGACAATCCTATGGTCTTTGCCAGTCGAGGGGAGACAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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3UTR CAA 72 bp | GAAAACAAGATCAGGGCTCTGGGTTCAGCCACTGCATaGCTGCCATGGCCTATCCAGAGTATGTTTGAAAAG | + |
Preference number: 4 (lower is better) Translates to: ENKIRALGSATA*LPWPIQSMFEK Trigger: CTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGCTGAACCCAGAGCCCTGATCTTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | CTGTTCAGTTCTGTAGTGATGATGTCCTTCACAAAGGCTATTGTGTCGTTCACCCTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTT | + |
Preference number: 4 (lower is better) Translates to: LFSSVVMMSFTKAIVSFTLHPPK*SHHCPV Trigger: AACCGGACAATGGTGGCTTCACTTCGGTGGATGAAG...GGTGAACGACACAATAGCCTTTGTGAAGGACATCATCACTACAGAACTGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR GCA 90 bp | TCCATGGAAGTGTTAGCCAACAGAAACCCTTTCCTCCATTCCTGCTTTGGCTGGAAAACTCCTTCTGGCTaGGACGGAATGAAATCAGGA | + |
Preference number: 4 (lower is better) Translates to: SMEVLANRNPFLHSCFGWKTPSG*DGMKSG Trigger: TCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTT...CCAGCCAAAGCAGGAATGGAGGAAAGGGTTTCTGTTGGCTAACACTTCCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACCCTCCCATGGAGACGTaGTCTTCTGTAGCAGCACTG | + |
Preference number: 4 (lower is better) Translates to: SLFILSRKTTPQPQGTQYPPMET*SSVAAL Trigger: CAGTGCTGCTACAGAAGACCACGTCTCCATGGGAGG...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACAAATAGTCCAGGGCTTTaGCTGGGTATTCACCATGGA | + |
Preference number: 4 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTNSPGL*LGIHHG Trigger: TCCATGGTGAATACCCAGCCAAAGCCCTGGACTATT...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGTTCATGGACACCAATaGCCAAATAGTCCAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTVHGHQ*PNSPGL Trigger: AAGCCCTGGACTATTTGGCCATTGGTGTCCATGAAC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACTCCACAGATGAAGGGTaGCACAGAGCCTTGCTCTCA | + |
Preference number: 4 (lower is better) Translates to: SLFILSRKTTPQPQGTQYSTDEG*HRALLS Trigger: TGAGAGCAAGGCTCTGTGCCACCCTTCATCTGTGGA...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCGAAGGCTTTGGTGGTaGCCTTCAGCACCTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: FINWVDYLIMATGLSLRLRRLWW*PSAPPG Trigger: CCCTGGAGGTGCTGAAGGGCACCACCAAAGCCTTCG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | CCAGCCATGCTCTCAGAATCGTGCACATGCAGTGTTTaGCACTTGTTTACCACAATGGGCACAAAGTCATTA | + |
Preference number: 4 (lower is better) Translates to: PAMLSESCTCSV*HLFTTMGTKSL Trigger: TAATGACTTTGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCATGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | ACAGGTCTCAGTCTTCGACTTCCCACGTGGCTTGTGTaGGTCACTAGGGAATCAGCAAAAATACTAACAGAA | + |
Preference number: 4 (lower is better) Translates to: TGLSLRLPTWLV*VTRESAKILTE Trigger: TTCTGTTAGTATTTTTGCTGATTCCCTAGTGACCAACACAAGCCACGTGGGAAGTCGAAGACTGAGACCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR TCA 90 bp | TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCATGGAAGTTTCCTCCTaGAATTGTCTCCCCTCGACT | + |
Preference number: 4 (lower is better) Translates to: FSFLEGWLKPVVNRTQMIMEVSS*NCLPST Trigger: AGTCGAGGGGAGACAATTTCAGGAGGAAACTTCCAT...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCAACATATTTAGCATCTaGCCAGCCACTCTTCGGGGA | + |
Preference number: 4 (lower is better) Translates to: FSFLEGWLKPVVNRTQMINIFSI*PATLRG Trigger: TCCCCGAAGAGTGGCTGGGCAGATGCTAAATATGTT...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACATGGTTTCAAGACAATTaGTTTCAGTCCATGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTWFQDN*FQSMGF Trigger: GAAGCCCATGGACTGAAACCAATTGTCTTGAAACCA...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCCGATCGCAGAACCTGTaGCTTTCTGCGATTTCTGAT | + |
Preference number: 4 (lower is better) Translates to: FSFLEGWLKPVVNRTQMIRSQNL*LSAISD Trigger: ATCAGAAATCGCAGAAAGCCACAGGTTCTGCGATCG...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | TGGGACTACCTAGATCAGATTGGCCTGTGGCAATGTTaGCAAAGGATTATCTTGATTGATAACTGGTGTGGG | + |
Preference number: 4 (lower is better) Translates to: WDYLDQIGLWQC*QRIILIDNWCG Trigger: CCCACACCAGTTATCAATCAAGATAATCCTTTGCAAACATTGCCACAGGCCAATCTGATCTAGGTAGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | CTTTCGATTCTTCTTTCACTAATTGCCGCAAGTTCATGGACACCAATGGCCAAACAGGCTCCCGGTATTTaGTGTATAGGAAAACTCCTT | + |
Preference number: 4 (lower is better) Translates to: LSILLSLIAASSWTPMAKQAPGI*CIGKLL Trigger: AAGGAGTTTTCCTATACAGCAAATACCGGGAGCCTG...TTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR GCA 90 bp | AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACCTGGATTCCGGAATGTaGTCCATTCTGTATTTCTCG | + |
Preference number: 4 (lower is better) Translates to: SLFILSRKTTPQPQGTQYLDSGM*SILYFS Trigger: CGAGAAATACAGAATGGAGCACATTCCGGAATCCAG...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCCCAACACCTGAAGAATaGGAACGGACTAAGTTGACT | + |
Preference number: 4 (lower is better) Translates to: FSFLEGWLKPVVNRTQMIPTPEE*ERTKLT Trigger: AGTCAACTTAGTCCGTTCCCATTCTTCAGGTGTTGG...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATATTGGTTTCAGTCCATaGGCTTCTAGAACATATTTA | + |
Preference number: 4 (lower is better) Translates to: VNSQEAMFLQIAALTIHHIGFSP*ASRTYL Trigger: TAAATATGTTCTAGAAGCCCATGGACTGAAACCAAT...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACATGCCAGGCCTTCTTTTaGTTTCAAGACAATTGGTTT | + |
Preference number: 4 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTCQAFF*FQDNWF Trigger: AAACCAATTGTCTTGAAACCAAAAGAAGGCCTGGCA...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | CCACTGCATTGCTGCCATGGCCTATCCAGAGTATGTTaGAAAAGAGATGAGTTTTACACATTACAGGCAGTT | + |
Preference number: 4 (lower is better) Translates to: PLHCCHGLSRVC*KRDEFYTLQAV Trigger: AACTGCCTGTAATGTGTAAAACTCATCTCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR GCA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGCAGGAGGCATTAAATaGTTCAATAACTTGTTTCAG | + |
Preference number: 4 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTAGGIK*FNNLFQ Trigger: CTGAAACAAGTTATTGAAGCATTTAATGCCTCCTGC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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3UTR CAA 72 bp | ATGCTCTCAGAATCGTGCACATGCAGTGTTTTGCACTaGTTTACCACAATGGGCACAAAGTCATTAATCTTA | + |
Preference number: 4 (lower is better) Translates to: MLSESCTCSVLH*FTTMGTKSLIL Trigger: TAAGATTAATGACTTTGTGCCCATTGTGGTAAACAAGTGCAAAACACTGCATGTGCACGATTCTGAGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS TCA 90 bp | CGCACAGCCTCACGGCCCAGCCAGCCAACAGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCATTCCCCACGCACGTGCACTGTGTAC | + |
Preference number: 5 (lower is better) Translates to: RTASRPSQPTVSFPS*QGTASHSPRTCTVY Trigger: GTACACAGTGCACGTGCGTGGGGAATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGAGGCTGTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS TCA 90 bp | TCTTCATGTAGCGTCGCACAGCCTCACGGCCCAGCCAGCCAACAGTaGGCTTCCCATCCTGACAGGGCACCGCCAGCCATTCCCCACGCA | + |
Preference number: 5 (lower is better) Translates to: SSCSVAQPHGPASQQ*ASHPDRAPPAIPHA Trigger: TGCGTGGGGAATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGAGGCTGTGCGACGCTACATGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | TCAATGGCTAGCACTTGTTCCACGTGCTCGACGACCCTGAGGGCTTTCCTGGCTTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCC | + |
Preference number: 5 (lower is better) Translates to: SMASTCSTCSTTLRAFLASSSSS*SSRPRP Trigger: GGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA...AGCCAGGAAAGCCCTCAGGGTCGTCGAGCACGTGGAACAAGTGCTAGCCATTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR CAA 90 bp | GCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTTGTTTAGCAGGCCCAGGCCCTaGCACCGATGCACAAGGAAT | + |
Preference number: 5 (lower is better) Translates to: ALLRSAPGRTPSPAEWLFSRPRP*HRCTRN Trigger: ATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCT...AAACAACCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS GCA 90 bp | TCCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATaGACAAGGAATTGCACTTCATCCACCGAAGTGAAGCCACCATTG | + |
Preference number: 5 (lower is better) Translates to: SSSSSLSSRPRPLHR*TRNCTSSTEVKPPL Trigger: CAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | TCCAGGGCCTTACTACGGAGCGCACCAGGTCGTACACCTTCTCCAGCGGAGTGGTCAGGCTCCCGGTATTaGCTGTATAGGAAAACTCCT | + |
Preference number: 5 (lower is better) Translates to: SRALLRSAPGRTPSPAEWSGSRY*LYRKTP Trigger: AGGAGTTTTCCTATACAGCAAATACCGGGAGCCTGA...CCACTCCGCTGGAGAAGGTGTACGACCTGGTGCGCTCCGTAGTAAGGCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR CAA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTCGGTATCGAAGGCTTaGGTGGTGCCCTTCAGCACC | + |
Preference number: 5 (lower is better) Translates to: PETLSPSTHQCCAKLRPISVSKA*VVPFST Trigger: GGTGCTGAAGGGCACCACCAAAGCCTTCGATACCGA...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCGAAAGCAACTTCAATTaGCCCACGGTGAGGTCGGAC | + |
Preference number: 5 (lower is better) Translates to: NEFTMLLGWLSSEPPGAAESNFN*PTVRSD Trigger: GTCCGACCTCACCGTGGGCAAATTGAAGTTGCTTTC...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCC | + |
Preference number: 5 (lower is better) Translates to: NEFTMLLGWLSSEPPGAATSTNS*SSKATS Trigger: GGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGT...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS GCA 90 bp | TCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATTaGACTTCATCCACCGAAGTGAAGCCACCATTGTCCGGTTTGTTC | + |
Preference number: 5 (lower is better) Translates to: SLSSRPRPLHRCTRN*TSSTEVKPPLSGLF Trigger: GAACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | CTTCAGCACCTCCAGGGTCAAGGCAGCCACAATATCAGCTTGCCGGGCAATGGCGAAGTGAAGCCACCATaGTCCGGTTTGTTCTTCATG | + |
Preference number: 5 (lower is better) Translates to: LQHLQGQGSHNISLPGNGEVKPP*SGLFFM Trigger: CATGAAGAACAAACCGGACAATGGTGGCTTCACTTC...GCCATTGCCCGGCAAGCTGATATTGTGGCTGCCTTGACCCTGGAGGTGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR CAA 90 bp | ACCAGGGCTGCTGCGGTGCAGTGGGCTATCATGAACCCAGAATTGAGACCTCCTACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCC | + |
Preference number: 5 (lower is better) Translates to: TRAAAVQWAIMNPELRPPTSTNS*SSKATS Trigger: GGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGT...AGGAGGTCTCAATTCTGGGTTCATGATAGCCCACTGCACCGCAGCAGCCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS TCA 90 bp | GGCCCTTGCACCGATGCACAAGGAATTGCACTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTTTGTTCTTCATGTAGCGTCGCACAG | + |
Preference number: 5 (lower is better) Translates to: GPCTDAQGIALHPPK*SHHCPVCSSCSVAQ Trigger: CTGTGCGACGCTACATGAAGAACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AATGAATTCACCATGTTGCTGGGCTGGCTGAGCAGTGAGCCCCCAGGAGCTGCCAGCTCCTGTAGCTTATaGGCAGGGATTACAGTTCTA | + |
Preference number: 5 (lower is better) Translates to: NEFTMLLGWLSSEPPGAASSCSL*AGITVL Trigger: TAGAACTGTAATCCCTGCCAATAAGCTACAGGAGCT...GGCAGCTCCTGGGGGCTCACTGCTCAGCCAGCCCAGCAACATGGTGAATTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AGCCTGTTTATATTATCAAGAAAGACAACTCCACAACCACAAGGCACCCAGTACTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCC | + |
Preference number: 5 (lower is better) Translates to: SLFILSRKTTPQPQGTQYSSSSS*SSRPRP Trigger: GGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA...GTACTGGGTGCCTTGTGGTTGTGGAGTTGTCTTTCTTGATAATATAAACAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCAACCTCCCAAACCTTTaGGTCAAGAAGCAACCTGTG | + |
Preference number: 5 (lower is better) Translates to: PETLSPSTHQCCAKLRPINLPNL*VKKQPV Trigger: CACAGGTTGCTTCTTGACCAAAAGGTTTGGGAGGTT...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | TGCTCCATTCTGTATTTCTCGATGTACGGTGCGGCAACCTCCCAAACCTTTTGGCCGATGCACAAGGAATaGCACTTCATCCACCGAAGT | + |
Preference number: 5 (lower is better) Translates to: CSILYFSMYGAATSQTFWPMHKE*HFIHRS Trigger: ACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGG...CCAAAAGGTTTGGGAGGTTGCCGCACCGTACATCGAGAAATACAGAATGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016031.14 |
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CDS-3UTR CAA 90 bp | GTCAACAGCCAGGAAGCCATGTTTCTACAGATTGCTGCCCTGACTATCCACCATCCGATGCACAAGGAATaGCACTTCATCCACCGAAGT | + |
Preference number: 5 (lower is better) Translates to: VNSQEAMFLQIAALTIHHPMHKE*HFIHRS Trigger: ACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGG...ATGGTGGATAGTCAGGGCAGCAATCTGTAGAAACATGGCTTCCTGGCTGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | CCTGAGACTCTCTCTCCATCAACACACCAGTGCTGTGCTAAGCTCAGGCCCATCTTGGTTTCAAGACAATaGGTTTCAGTCCATGGGCTT | + |
Preference number: 5 (lower is better) Translates to: PETLSPSTHQCCAKLRPILVSRQ*VSVHGL Trigger: AAGCCCATGGACTGAAACCAATTGTCTTGAAACCAA...GATGGGCCTGAGCTTAGCACAGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS TCA 90 bp | ATAGTCCAGGGCTTTGGCTGGGTATTCACCATGGAAGTTTCCTCCTaGAATTGTCTCCCCTCGACTGGCAAAGACCATAGGATTGTCTGT | + |
Preference number: 5 (lower is better) Translates to: IVQGFGWVFTMEVSS*NCLPSTGKDHRIVC Trigger: ACAGACAATCCTATGGTCTTTGCCAGTCGAGGGGAGACAATTTCAGGAGGAAACTTCCATGGTGAATACCCAGCCAAAGCCCTGGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | TTTTCATTCTTGGAGGGGTGGCTTAAGCCTGTAGTTAATAGGACACAGATGATCTCTCCAGCGGAGTGGTaGTTTTCAGGGGGCGCAGAA | + |
Preference number: 5 (lower is better) Translates to: FSFLEGWLKPVVNRTQMISPAEW*FSGGAE Trigger: TTCTGCGCCCCCTGAAAACAACCACTCCGCTGGAGA...GATCATCTGTGTCCTATTAACTACAGGCTTAAGCCACCCCTCCAAGAATGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACGTCAGACTCTGGGATaGTGGCTGAGTTCTTTCGGA | + |
Preference number: 5 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTRQTLG*WLSSFG Trigger: TCCGAAAGAACTCAGCCACAATCCCAGAGTCTGACG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | CACCCTCAAATGCCTCATCTGTGCAATGGGAGGTTGCTTAGTGAAGTTACTACACCTTTGGCTAAGACGTaGATCCTCAAAGCCAAGAGC | + |
Preference number: 5 (lower is better) Translates to: HPQMPHLCNGRLLSEVTTPLAKT*ILKAKS Trigger: GCTCTTGGCTTTGAGGATCAACGTCTTAGCCAAAGG...TGTAGTAACTTCACTAAGCAACCTCCCATTGCACAGATGAGGCATTTGAGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS TCA 90 bp | CCCGGTATTTGCTGTATAGGAAAACTCCTTCTGGCTGCGACGGAATaGAATCAGGAGACATCACATCACCTTCAATCACCACTTCTACGA | + |
Preference number: 5 (lower is better) Translates to: PGICCIGKLLLAATE*NQETSHHLQSPLLR Trigger: TCGTAGAAGTGGTGATTGAAGGTGATGTGATGTCTCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCAAATACCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 90 bp | GCTGAGGGAAGGATTACACAGCCTTTCGATTCTTCTTTCACTAATTaGCGCAAGTTCATGGACACCAATGGCCAAATAGTCCAGGGCTTT | + |
Preference number: 5 (lower is better) Translates to: AEGRITQPFDSSFTN*RKFMDTNGQIVQGF Trigger: AAAGCCCTGGACTATTTGGCCATTGGTGTCCATGAACTTGCGGCAATTAGTGAAAGAAGAATCGAAAGGCTGTGTAATCCTTCCCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | CCTAGCTTCCATTTCTCCTCAAATCGAAGAACACAATGGAGCAAGCCACTGACAGAAGTGAAGCCACCATaGTCCGGTTTGTTCTTCATG | + |
Preference number: 5 (lower is better) Translates to: PSFHFSSNRRTQWSKPLTEVKPP*SGLFFM Trigger: CATGAAGAACAAACCGGACAATGGTGGCTTCACTTC...TGTCAGTGGCTTGCTCCATTGTGTTCTTCGATTTGAGGAGAAATGGAAGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTATCATCTGTGTCCCATaGATGAGTGCCAGGCCTTCT | + |
Preference number: 5 (lower is better) Translates to: KAPSTPQTIVTRKQDQGSIICVP*MSARPS Trigger: AGAAGGCCTGGCACTCATCAATGGGACACAGATGAT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTACAACTGTTCTTTCTTaGATGATGCTGTCGATGACC | + |
Preference number: 5 (lower is better) Translates to: KAPSTPQTIVTRKQDQGSTTVLS*MMLSMT Trigger: GGTCATCGACAGCATCATCAAAGAAAGAACAGTTGT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | AAGGCACCCAGTACTCCTCAAACCATAGTAACAAGAAAACAAGATCAGGGCTCTAAATGCTTCAATAACTaGTTTCAGCGTCTCCAAGGA | + |
Preference number: 5 (lower is better) Translates to: KAPSTPQTIVTRKQDQGSKCFNN*FQRLQG Trigger: TCCTTGGAGACGCTGAAACAAGTTATTGAAGCATTT...AGAGCCCTGATCTTGTTTTCTTGTTACTATGGTTTGAGGAGTACTGGGTGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTCCTTCACAAAGGCTATaGTGTCGTTCACCACACCGT | + |
Preference number: 5 (lower is better) Translates to: FINWVDYLIMATGLSLRLPSQRL*CRSPHR Trigger: ACGGTGTGGTGAACGACACAATAGCCTTTGTGAAGG...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS-3UTR CAA 90 bp | TTCATAAATTGGGTAGATTATTTAATAATGGCGACAGGTCTCAGTCTTCGACTTTCAGGCTCCCGGTATTaGCTGTATAGGAAAACTCCT | + |
Preference number: 5 (lower is better) Translates to: FINWVDYLIMATGLSLRLSGSRY*LYRKTP Trigger: AGGAGTTTTCCTATACAGCAAATACCGGGAGCCTGA...AAGTCGAAGACTGAGACCTGTCGCCATTATTAAATAATCTACCCAATTTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |
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CDS TCA 72 bp | TCACGGCCCAGCCAGCCAACAGTGAGCTTCCCATCCTaGCAGGGCACCGCCAGCCATTCCCCACGCACGTGC | + |
Preference number: 6 (lower is better) Translates to: SRPSQPTVSFPS*QGTASHSPRTC Trigger: GCACGTGCGTGGGGAATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS TCA 72 bp | AGCGTCGCACAGCCTCACGGCCCAGCCAGCCAACAGTaGGCTTCCCATCCTGACAGGGCACCGCCAGCCATT | + |
Preference number: 6 (lower is better) Translates to: SVAQPHGPASQQ*ASHPDRAPPAI Trigger: AATGGCTGGCGGTGCCCTGTCAGGATGGGAAGCTCACTGTTGGCTGGCTGGGCCGTGAGGCTGTGCGACGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | CCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTTaGACCGATGCACAAGGAATTGCACTTCATCCACCG | + |
Preference number: 6 (lower is better) Translates to: PARPHCPAGPGP*TDAQGIALHPP Trigger: CGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 72 bp | TCATTGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACA | + |
Preference number: 6 (lower is better) Translates to: SLSSKATSSSSS*SSRPRPLHRCT Trigger: TGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 90 bp | AAGGCCACCTCCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTaGCACCGATGCACAAGGAATTGCACTTCATCCACCGAAGTGAAG | + |
Preference number: 6 (lower is better) Translates to: KATSSSSSLSSRPRP*HRCTRNCTSSTEVK Trigger: CTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 72 bp | TCCAGCTCGTCCTCATTGTCCAGCAGGCCCAGGCCCTaGCACCGATGCACAAGGAATTGCACTTCATCCACC | + |
Preference number: 6 (lower is better) Translates to: SSSSSLSSRPRP*HRCTRNCTSST Trigger: GGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 90 bp | TCTACGAACTCATTGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATaGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATTGC | + |
Preference number: 6 (lower is better) Translates to: STNSLSSKATSSSSS*SSRPRPLHRCTRNC Trigger: GCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGAGTTCGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | AGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATTaGACTTCATCCACCGAAGTGAAGCCACCATTGTCC | + |
Preference number: 6 (lower is better) Translates to: SRPRPLHRCTRN*TSSTEVKPPLS Trigger: GGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 72 bp | CAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATaGCACTTCATCCACCGAAGTGAAGCCACCATTGTC | + |
Preference number: 6 (lower is better) Translates to: QQAQALAPMHKE*HFIHRSEATIV Trigger: GACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | TCCTCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATaGACAAGGAATTGCACTTCATCCACCGAAGTGAAG | + |
Preference number: 6 (lower is better) Translates to: SSLSSRPRPLHR*TRNCTSSTEVK Trigger: CTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 90 bp | CTCATTGTCCAGCAGGCCCAGGCCCTTGCACCGATGCACAAGGAATaGCACTTCATCCACCGAAGTGAAGCCACCATTGTCCGGTTTGTT | + |
Preference number: 6 (lower is better) Translates to: LIVQQAQALAPMHKE*HFIHRSEATIVRFV Trigger: AACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGTGCAAGGGCCTGGGCCTGCTGGACAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 90 bp | TCAGGAGACATCACATCACCTTCAATCACCACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATTGTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: SGDITSPSITTSTNS*SSKATSSSSSLSSR Trigger: CCTGCTGGACAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGTGGTGATTGAAGGTGATGTGATGTCTCCTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS TCA 72 bp | GACCTCCCGGGACTGCTGCACTTTCTTCTCAGCAATTaGAGTGAGCTTTATCTTGTAACGTCCCTTGCCCAG | + |
Preference number: 6 (lower is better) Translates to: DLPGLLHFLLSN*SELYLVTSLAQ Trigger: CTGGGCAAGGGACGTTACAAGATAAAGCTCACTTCAATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS TCA 72 bp | ACCGATGCACAAGGAATTGCACTTCATCCACCGAAGTaGAGCCACCATTGTCCGGTTTGTTCTTCATGTAGC | + |
Preference number: 6 (lower is better) Translates to: TDAQGIALHPPK*SHHCPVCSSCS Trigger: GCTACATGAAGAACAAACCGGACAATGGTGGCTTCACTTCGGTGGATGAAGTGCAATTCCTTGTGCATCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS CAA 72 bp | ATCACATCACCTTCAATCACCACTTCTACGAACTCATaGTCCTCTAAGGCCACCTCCAGCTCGTCCTCATTG | + |
Preference number: 6 (lower is better) Translates to: ITSPSITTSTNS*SSKATSSSSSL Trigger: CAATGAGGACGAGCTGGAGGTGGCCTTAGAGGACAATGAGTTCGTAGAAGTGGTGATTGAAGGTGATGTGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | TCCCGGTATTTGCTGTATAGGAAAACTCCTTCTGGCTaGGACGGAATGAAATCAGGAGACATCACATCACCT | + |
Preference number: 6 (lower is better) Translates to: SRYLLYRKTPSG*DGMKSGDITSP Trigger: AGGTGATGTGATGTCTCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCAAATACCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | CATCTAGGGCAATGTATTTTTCAGGCTCCCGGTATTTaGTGTATAGGAAAACTCCTTCTGGCTGCGACGGAA | + |
Preference number: 6 (lower is better) Translates to: HLGQCIFQAPGI*CIGKLLLAATE Trigger: TTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCAAATACCGGGAGCCTGAAAAATACATTGCCCTAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | TCTTTGATGATGCTGTCGATGACCTCCCGGGACTGCTaGACTTTCTTCTCAGCAATTGAAGTGAGCTTTATC | + |
Preference number: 6 (lower is better) Translates to: SLMMLSMTSRDC*TFFSAIEVSFI Trigger: GATAAAGCTCACTTCAATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGTCATCGACAGCATCATCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS GCA 72 bp | CTTTCTTTGATGATGCTGTCGATGACCTCCCGGGACTaGTGCACTTTCTTCTCAGCAATTGAAGTGAGCTTT | + |
Preference number: 6 (lower is better) Translates to: LSLMMLSMTSRD*CTFFSAIEVSF Trigger: AAAGCTCACTTCAATTGCTGAGAAGAAAGTGCAGCAGTCCCGGGAGGTCATCGACAGCATCATCAAAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS TCA 72 bp | TGCTGTATAGGAAAACTCCTTCTGGCTGCGACGGAATaGAATCAGGAGACATCACATCACCTTCAATCACCA | + |
Preference number: 6 (lower is better) Translates to: CCIGKLLLAATE*NQETSHHLQSP Trigger: TGGTGATTGAAGGTGATGTGATGTCTCCTGATTTCATTCCGTCGCAGCCAGAAGGAGTTTTCCTATACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016031.14 ENSMUST00000129421.8 |
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CDS TCA 72 bp | GTTTCCCAACACCTGAAGAATGGGAACGGACTAAGTTaGCTTGAAGCTCCTGTAGCTTATTGGCAGGGATTA | + |
Preference number: 6 (lower is better) Translates to: VSQHLKNGNGLS*LEAPVAYWQGL Trigger: TAATCCCTGCCAATAAGCTACAGGAGCTTCAAGTCAACTTAGTCCGTTCCCATTCTTCAGGTGTTGGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129421.8 |