Pregenerated sensors for HADHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059447Ensembl transcript IDs: ENSMUST00000026841.15, ENSMUST00000114783.6, ENSMUST00000114786.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATGGTAGTGCATTGAAATaGCATTGCCCAGTGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GTAQTSVIVWNLESRSCDGSALK*HCPVQV Trigger: CACTTGCACTGGGCAATGCCATTTCAATGCACTACC...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGGTAGTGCATTGAAATaGCATTGCCCAGTGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: QPLVSVKRNNRNCANICNGSALK*HCPVQV Trigger: CACTTGCACTGGGCAATGCCATTTCAATGCACTACC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATAGAAGAGCTAGGAACTaGAGGTATCACTTGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: QPLVSVKRNNRNCANICNRRARN*RYHLVV Trigger: CACTACCAAGTGATACCTGCAGTTCCTAGCTCTTCT...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTGCATTGAAATGGCATTaGCCAGTGCAAGTGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSALKWH*PVQVLK Trigger: CTTCAGCACTTGCACTGGGCAATGCCATTTCAATGC...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTAGAAGAGCTAGGAACTaGAGGTATCACTTGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSRRARN*RYHLVV Trigger: CACTACCAAGTGATACCTGCAGTTCCTAGCTCTTCT...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| 3UTR GCA 72 bp | CTGCAGGTATCACTTGGTAGTGCATTGAAATGGCATTaGCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGC | + |
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Preference number: 3 (lower is better) Translates to: LQVSLGSALKWH*PVQVLKRSVGR Trigger: GCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAGTGATACCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATTGCATTGAAATGGCATaGCCCAGTGCAAGTGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: QPLVSVKRNNRNCANICNCIEMA*PSASAE Trigger: TTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATTCACTTGGTAGTGCATaGAAATGGCATTGCCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QPLVSVKRNNRNCANICNSLGSA*KWHCPV Trigger: CACTGGGCAATGCCATTTCAATGCACTACCAAGTGA...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| 3UTR CCA 72 bp | GAAATAACAGGAACTGCGCAAACATCTGTAATAGTCTaGAACTTAGAGAGCAGAAGCTGTGATTATCGAAAA | + |
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Preference number: 3 (lower is better) Translates to: EITGTAQTSVIV*NLESRSCDYRK Trigger: TTTTCGATAATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCCTGTTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR TCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTTGTTGGCAGCTGCCATaGCCAGCCGACAGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPCWQLP*PADSQW Trigger: CCACTGGCTGTCGGCTGGTCATGGCAGCTGCCAACA...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTAGCAGCCAGTCGGTCTaGAGAGTGGCCCATGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPSSQSV*RVAHGL Trigger: GAGACCATGGGCCACTCTGCAGACCGACTGGCTGCT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTGTGGCTCCAAAAGGGTaGCCCAGAGACAGTGATCCG | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPVAPKG*PRDSDP Trigger: CGGATCACTGTCTCTGGGGCACCCTTTTGGAGCCAC...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTCTTGGTCTGGACAGCTaGGGCAGAGTGCAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPLGLDS*GRVQLG Trigger: TCCCAACTGCACTCTGCCCCAGCTGTCCAGACCAAG...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGAGAACTCAGCCACTaGAGGGAGCTCAGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVGELSH*RELRGQ Trigger: CTGTCCCCTGAGCTCCCTGCAGTGGCTGAGTTCTCC...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR TCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATTGTTGGCAGCTGCCATaGCCAGCCGACAGCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDCWQLP*PADSQW Trigger: CCACTGGCTGTCGGCTGGTCATGGCAGCTGCCAACA...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCACAGCTGGGGCAGAGTaGAGTTGGGAAGAACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVTAGAE*SWEEQL Trigger: GAGCTGTTCTTCCCAACTGCACTCTGCCCCAGCTGT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATAGCAGCCAGTCGGTCTaGAGAGTGGCCCATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDSSQSV*RVAHGL Trigger: GAGACCATGGGCCACTCTGCAGACCGACTGGCTGCT...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTAAGTCTTCTTTGACTTaGTCTGGACAGCTGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPKSSLT*SGQLGQ Trigger: CTGCCCCAGCTGTCCAGACCAAGTCAAAGAAGACTT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTACGACGACATCACACTaGCCAGAAGCTATCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPTTTSH*PEAIRP Trigger: TGGTCTGATAGCTTCTGGCCAGTGTGATGTCGTCGT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR TCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCCTCTGTCCTCTGACATaGTTAGCATCGCAGAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVLCPLT*LASQKR Trigger: GCGCTTCTGCGATGCTAATCATGTCAGAGGACAGAG...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR TCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGTGCCCCAGAGACAGTaGTCCGCCCCAGATATTAAA | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVVPQRQ*SAPDIK Trigger: TTTAATATCTGGGGCGGATCACTGTCTCTGGGGCAC...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR TCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCTCCACAATCATAGCATaGCCCTGTCCTCCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVSTIIA*PCPPAA Trigger: TGCAGCTGGAGGACAGGGTCATGCTATGATTGTGGA...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCACAGCAGAAATGGAATaGGGACCCCTTCCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVTAEME*GPLPPP Trigger: TGGTGGTGGAAGGGGTCCGCATTCCATTTCTGCTGT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTCAACAAACCCGAAAGTaGAGCTCTAGCCAAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPQQTRK*SSSQVM Trigger: CATGACTTGGCTAGAGCTGCACTTTCGGGTTTGTTG...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATCTTGGTCTGGACAGCTaGGGCAGAGTGCAGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDLGLDS*GRVQLG Trigger: TCCCAACTGCACTCTGCCCCAGCTGTCCAGACCAAG...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTTCAGACCAACAGCTGTaGTCATGGCTTGGTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPSDQQL*SWLGLK Trigger: CTTCAAACCAAGCCATGACCACAGCTGTTGGTCTGA...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATGGGGCAGAGTGCAGTTaGGAAGAACAGCTCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDGAECS*EEQLRG Trigger: ACCTCTGAGCTGTTCTTCCCAACTGCACTCTGCCCC...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCAAGTCTTCTTTGACTTaGTCTGGACAGCTGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVKSSLT*SGQLGQ Trigger: CTGCCCCAGCTGTCCAGACCAAGTCAAAGAAGACTT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCACGACGACATCACACTaGCCAGAAGCTATCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVTTTSH*PEAIRP Trigger: TGGTCTGATAGCTTCTGGCCAGTGTGATGTCGTCGT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTGAGGTGATCCAACCTTaGTTTTCCTACCCATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPEVIQP*FSYPCS Trigger: ACTACATGGGTAGGAAAACCAAGGTTGGATCACCTC...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATCCAGCCGACAGCCAGTaGCTCCAAAAGGGTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNPADSQ*LQKGAP Trigger: TGGGGCACCCTTTTGGAGCCACTGGCTGTCGGCTGG...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATACAGCAGAAATGGAATaGGGACCCCTTCCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDTAEME*GPLPPP Trigger: TGGTGGTGGAAGGGGTCCGCATTCCATTTCTGCTGT...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCCAACAAACCCGAAAGTaGAGCTCTAGCCAAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVQQTRK*SSSQVM Trigger: CATGACTTGGCTAGAGCTGCACTTTCGGGTTTGTTG...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGGAGAACTCAGCCACTaGAGGGAGCTCAGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNGELSH*RELRGQ Trigger: CTGTCCCCTGAGCTCCCTGCAGTGGCTGAGTTCTCC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATAGCAGCCAGTCGGTCTaGAGAGTGGCCCATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNSSQSV*RVAHGL Trigger: GAGACCATGGGCCACTCTGCAGACCGACTGGCTGCT...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATTTCTTTGACTTGGTCTaGACAGCTGGGGCAGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDFFDLV*TAGAEC Trigger: GCACTCTGCCCCAGCTGTCCAGACCAAGTCAAAGAA...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR TCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTCTCATATTTCTTGAATaGCGAATAGGGACATCAGAC | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPLIFLE*RIGTSD Trigger: GTCTGATGTCCCTATTCGTCATTCAAGAAATATGAG...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTACTATGAGAACGCAGTaGATATTCATCCTGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: CIEMALPSASAEEISRSPTMRTQ*IFILFH Trigger: ATGGAACAGGATGAATATGCACTGCGTTCTCATAGT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGTGGCTCCAAAAGGGTaGCCCAGAGACAGTGATCCG | + |
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Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNVAPKG*PRDSDP Trigger: CGGATCACTGTCTCTGGGGCACCCTTTTGGAGCCAC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATCTTGGTCTGGACAGCTaGGGCAGAGTGCAGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNLGLDS*GRVQLG Trigger: TCCCAACTGCACTCTGCCCCAGCTGTCCAGACCAAG...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTCCAGCCGACAGCCAGTaGCTCCAAAAGGGTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSPADSQ*LQKGAP Trigger: TGGGGCACCCTTTTGGAGCCACTGGCTGTCGGCTGG...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATACAGCTGGGGCAGAGTaGAGTTGGGAAGAACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNTAGAE*SWEEQL Trigger: GAGCTGTTCTTCCCAACTGCACTCTGCCCCAGCTGT...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCTTTATACGAAGTaGCTGACAGCAGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVGLYTK*LTAEME Trigger: TTCCATTTCTGCTGTCAGGCACTTCGTATAAAGACC...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGGGGCAGAGTGCAGTTaGGAAGAACAGCTCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNGAECS*EEQLRG Trigger: ACCTCTGAGCTGTTCTTCCCAACTGCACTCTGCCCC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGTGCCCCAGAGACAGTaGTCCGCCCCAGATATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNVPQRQ*SAPDIK Trigger: TTTAATATCTGGGGCGGATCACTGTCTCTGGGGCAC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATACAGCAGAAATGGAATaGGGACCCCTTCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNTAEME*GPLPPP Trigger: TGGTGGTGGAAGGGGTCCGCATTCCATTTCTGCTGT...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCACTATGAGAACGCAGTaGATATTCATCCTGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVTMRTQ*IFILFH Trigger: ATGGAACAGGATGAATATGCACTGCGTTCTCATAGT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCAACTGTGTCCTTTCCTaGTACTTTGAAGGGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVNCVLS*YFEGYN Trigger: ATTGTACCCTTCAAAGTACCAGGAAAGGACACAGTT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCATCAACAACATCCTTTaGAATATTGGTCCGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSALKWHCPVQVLKRSVINNIL*NIGPMQ Trigger: TTGCATCGGACCAATATTCCAAAGGATGTTGTTGAT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTCTCTGTCCTCTGACATaGTTAGCATCGCAGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSLCPLT*LASQKR Trigger: GCGCTTCTGCGATGCTAATCATGTCAGAGGACAGAG...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTGTGCCCCAGAGACAGTaGTCCGCCCCAGATATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSVPQRQ*SAPDIK Trigger: TTTAATATCTGGGGCGGATCACTGTCTCTGGGGCAC...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTTCCACAATCATAGCATaGCCCTGTCCTCCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSSTIIA*PCPPAA Trigger: TGCAGCTGGAGGACAGGGTCATGCTATGATTGTGGA...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATCAACAAACCCGAAAGTaGAGCTCTAGCCAAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNQQTRK*SSSQVM Trigger: CATGACTTGGCTAGAGCTGCACTTTCGGGTTTGTTG...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTTTCTTTGACTTGGTCTaGACAGCTGGGGCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSFFDLV*TAGAEC Trigger: GCACTCTGCCCCAGCTGTCCAGACCAAGTCAAAGAA...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATTCAGACCAACAGCTGTaGTCATGGCTTGGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNSDQQL*SWLGLK Trigger: CTTCAAACCAAGCCATGACCACAGCTGTTGGTCTGA...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATAACTGTGTCCTTTCCTaGTACTTTGAAGGGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDNCVLS*YFEGYN Trigger: ATTGTACCCTTCAAAGTACCAGGAAAGGACACAGTT...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTAAGTCTTCTTTGACTTaGTCTGGACAGCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSKSSLT*SGQLGQ Trigger: CTGCCCCAGCTGTCCAGACCAAGTCAAAGAAGACTT...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATCATCCTTTGGAATATTaGTCCGATGCAACAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNHPLEY*SDATNP Trigger: CGGGTTTGTTGCATCGGACCAATATTCCAAAGGATG...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATATCAACAACATCCTTTaGAATATTGGTCCGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAQTSVIVWNLESRSCDINNIL*NIGPMQ Trigger: TTGCATCGGACCAATATTCCAAAGGATGTTGTTGAT...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGAGGTGATCCAACCTTaGTTTTCCTACCCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNEVIQP*FSYPCS Trigger: ACTACATGGGTAGGAAAACCAAGGTTGGATCACCTC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATGGTCTTTATACGAAGTaGCTGACAGCAGAAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNGLYTK*LTAEME Trigger: TTCCATTTCTGCTGTCAGGCACTTCGTATAAAGACC...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTTCAGACCAACAGCTGTaGTCATGGCTTGGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSSDQQL*SWLGLK Trigger: CTTCAAACCAAGCCATGACCACAGCTGTTGGTCTGA...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATCTCATATTTCTTGAATaGCGAATAGGGACATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNLIFLE*RIGTSD Trigger: GTCTGATGTCCCTATTCGTCATTCAAGAAATATGAG...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTCATCCTTTGGAATATTaGTCCGATGCAACAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSHPLEY*SDATNP Trigger: CGGGTTTGTTGCATCGGACCAATATTCCAAAGGATG...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATAACTGTGTCCTTTCCTaGTACTTTGAAGGGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLVSVKRNNRNCANICNNCVLS*YFEGYN Trigger: ATTGTACCCTTCAAAGTACCAGGAAAGGACACAGTT...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTCTCATATTTCTTGAATaGCGAATAGGGACATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSLIFLE*RIGTSD Trigger: GTCTGATGTCCCTATTCGTCATTCAAGAAATATGAG...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTATCAACAACATCCTTTaGAATATTGGTCCGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSINNIL*NIGPMQ Trigger: TTGCATCGGACCAATATTCCAAAGGATGTTGTTGAT...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTTGGGGCAGAGTGCAGTaGGGAAGAACAGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CIEMALPSASAEEISRSPWGRVQ*GRTAQR Trigger: CCTCTGAGCTGTTCTTCCCAACTGCACTCTGCCCCA...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTCGCTGGCCCAGAGTCTaGGCTTTATTGAGATCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CIEMALPSASAEEISRSPRWPRV*ALLRSS Trigger: GCTTGATCTCAATAAAGCCAAGACTCTGGGCCAGCG...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCTCCTTCCTCAGTCTGTaGGCAGCTGCCATGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSALKWHCPVQVLKRSVSFLSL*AAAMTS Trigger: GCTGGTCATGGCAGCTGCCAACAGACTGAGGAAGGA...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTAAAGTCTTCTTTGACTaGGTCTGGACAGCTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CIEMALPSASAEEISRSPKVFFD*VWTAGA Trigger: TGCCCCAGCTGTCCAGACCAAGTCAAAGAAGACTTT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCCGCTGGCCCAGAGTCTaGGCTTTATTGAGATCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSALKWHCPVQVLKRSVRWPRV*ALLRSS Trigger: GCTTGATCTCAATAAAGCCAAGACTCTGGGCCAGCG...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATTCCTTCCTCAGTCTGTaGGCAGCTGCCATGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTAQTSVIVWNLESRSCDSFLSL*AAAMTS Trigger: GCTGGTCATGGCAGCTGCCAACAGACTGAGGAAGGA...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATTGGGGCAGAGTGCAGTaGGGAAGAACAGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPLVSVKRNNRNCANICNWGRVQ*GRTAQR Trigger: CCTCTGAGCTGTTCTTCCCAACTGCACTCTGCCCCA...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCACATCCTTTGGAATATaGGTCCGATGCAACAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSALKWHCPVQVLKRSVTSFGI*VRCNKP Trigger: GGGTTTGTTGCATCGGACCAATATTCCAAAGGATGT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTAATCAACAACATCCTTaGGAATATTGGTCCGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: CIEMALPSASAEEISRSPNQQHP*EYWSDA Trigger: TGCATCGGACCAATATTCCAAAGGATGTTGTTGATT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | TGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCGGTCGCCTAGAGTCTTGGCTTTATaGAGATCAAGCATCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CIEMALPSASAEEISRSPRVLAL*RSSIIF Trigger: GAAAATGATGCTTGATCTCAATAAAGCCAAGACTCT...AGGCGACCGACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTTGGGGCAGAGTGCAGTaGGGAAGAACAGCTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSWGRVQ*GRTAQR Trigger: CCTCTGAGCTGTTCTTCCCAACTGCACTCTGCCCCA...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATACATCCTTTGGAATATaGGTCCGATGCAACAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: GTAQTSVIVWNLESRSCDTSFGI*VRCNKP Trigger: GGGTTTGTTGCATCGGACCAATATTCCAAAGGATGT...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGTAGTGCATTGAAATGGCATTGCCCAGTGCAAGTGCTGAAGAGATCAGTCAGAGTCTTGGCTTTATaGAGATCAAGCATCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSALKWHCPVQVLKRSVRVLAL*RSSIIF Trigger: GAAAATGATGCTTGATCTCAATAAAGCCAAGACTCT...GACTGATCTCTTCAGCACTTGCACTGGGCAATGCCATTTCAATGCACTACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTGCGCAAACATCTGTAATAGTCTGGAACTTAGAGAGCAGAAGCTGTGATAATCAACAACATCCTTaGGAATATTGGTCCGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTAQTSVIVWNLESRSCDNQQHP*EYWSDA Trigger: TGCATCGGACCAATATTCCAAAGGATGTTGTTGATT...ATCACAGCTTCTGCTCTCTAAGTTCCAGACTATTACAGATGTTTGCGCAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTAAAGTCTTCTTTGACTaGGTCTGGACAGCTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSKVFFD*VWTAGA Trigger: TGCCCCAGCTGTCCAGACCAAGTCAAAGAAGACTTT...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| CDS-3UTR CAA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTACATCCTTTGGAATATaGGTCCGATGCAACAAACCC | + |
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Preference number: 5 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSTSFGI*VRCNKP Trigger: GGGTTTGTTGCATCGGACCAATATTCCAAAGGATGT...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| CDS-3UTR CAA 90 bp | CAGCCATTAGTCTCTGTGAAAAGAAATAACAGGAACTGCGCAAACATCTGTAATTCCTTTCCTGGTACTTaGAAGGGTACAATATCAGAA | + |
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Preference number: 5 (lower is better) Translates to: QPLVSVKRNNRNCANICNSFPGT*KGTISE Trigger: TTCTGATATTGTACCCTTCAAAGTACCAGGAAAGGA...ATTACAGATGTTTGCGCAGTTCCTGTTATTTCTTTTCACAGAGACTAATGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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| CDS-3UTR CAA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTTCCTTTCCTGGTACTTaGAAGGGTACAATATCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSSFPGT*KGTISE Trigger: TTCTGATATTGTACCCTTCAAAGTACCAGGAAAGGA...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| CDS-3UTR CAA 90 bp | CCTCTAATACATGTCTACTTTATTAAGGTCAACCAACATGGTATCTATGTCTCTAGAGTCTTGGCTTTATaGAGATCAAGCATCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: PLIHVYFIKVNQHGIYVSRVLAL*RSSIIF Trigger: GAAAATGATGCTTGATCTCAATAAAGCCAAGACTCT...AGAGACATAGATACCATGTTGGTTGACCTTAATAAAGTAGACATGTATTAGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026841.15 ENSMUST00000114786.8 |
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| CDS GCA 72 bp | GCCATGACCAGCCGACAGCCAGTGGCTCCAAAAGGGTaGCCCAGAGACAGTGATCCGCCCCAGATATTAAAC | + |
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Preference number: 6 (lower is better) Translates to: AMTSRQPVAPKG*PRDSDPPQILN Trigger: GTTTAATATCTGGGGCGGATCACTGTCTCTGGGGCACCCTTTTGGAGCCACTGGCTGTCGGCTGGTCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026841.15 ENSMUST00000114783.6 ENSMUST00000114786.8 |
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