Pregenerated sensors for HADHA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025745Ensembl transcript IDs: ENSMUST00000156859.3
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGAAGGCACAGGCAGCAGGTGTTCTGGGTTACTCTTAGCTGTTaGTTTGGGTCTCAGGCAGGGCTTGCAAAAGAAGCACAGTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LGRHRQQVFWVTLSC*FGSQAGLAKEAQWG Trigger: GCCCCACTGTGCTTCTTTTGCAAGCCCTGCCTGAGACCCAAATCAACAGCTAAGAGTAACCCAGAACACCTGCTGCCTGTGCCTTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 90 bp | CACCGAGGGACAGAGGTAGGACAAACTGAGGTCACAGAAGCGAGATaGGCTGATCTGTGGGTATCCATCCTTTGCATAACTCTCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: HRGTEVGQTEVTEAR*ADLWVSILCITLRS Trigger: GCTTCTGAGAGTTATGCAAAGGATGGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTCTGTCCCTCGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 90 bp | GATGAGCATGCCAAGAAGAACGTGTACAATGGCACAGTGAGGAAGTaGTTGGGGAAAGGAGTATCTTTCGCATCCTGGTACACCACACCT | + |
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Preference number: 1 (lower is better) Translates to: DEHAKKNVYNGTVRK*LGKGVSFASWYTTP Trigger: AGGTGTGGTGTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCTCACTGTGCCATTGTACACGTTCTTCTTGGCATGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGTAGGACAAACTGAGGTCACAGAAGCGAGATGGGCTGATCTGTGGGTATCCTTTGGACAGCACAGCTaGGAAGCGGCACTGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EVGQTEVTEARWADLWVSFGQHS*EAALPG Trigger: ACCTGGCAGTGCCGCTTCTCAGCTGTGCTGTCCAAA...GGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGTGGTTGGGGAAAGGAGTATCTTTCGCATCCTGGTACACCACACCTCTTGGGTTAGTGCATGGTaGGGTAGGGTGGGAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: EEVVGERSIFRILVHHTSWVSAW*GRVGGP Trigger: AGGCCCTCCCACCCTACCCCACCATGCACTAACCCA...AGAGGTGTGGTGTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CAA 90 bp | GCAAGCCCAAGGCTAGCCTTGGTCTTTTTCCTGCTTCCTGATAATTaGGACAGCACAGCTGAGAAGCGGCACTGCCAGGTCTGGGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: ASPRLALVFFLLPDN*DSTAEKRHCQVWVS Trigger: ACTAACCCAGACCTGGCAGTGCCGCTTCTCAGCTGTGCTGTCCAAATTATCAGGAAGCAGGAAAAAGACCAAGGCTAGCCTTGGGCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CAA 90 bp | CAGGGCAGAAGGCACTCTGATGGAGGAGCAAGCCCAAGGCTAGCCTaGGTCTTTTTCCTGCTTCCTGATAATTTGGACAGCACAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QGRRHSDGGASPRLA*VFFLLPDNLDSTAE Trigger: CTCAGCTGTGCTGTCCAAATTATCAGGAAGCAGGAAAAAGACCAAGGCTAGCCTTGGGCTTGCTCCTCCATCAGAGTGCCTTCTGCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCGTCTCAGGCAGGGCTTaGAAAAGAAGCACAGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GKTQKSKLNATEVWCNCSVSGRA*KRSTVG Trigger: CCCCACTGTGCTTCTTTTGCAAGCCCTGCCTGAGAC...GCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGTAGGACAAACTGAGGTCACAGAAGCGAGATGGGCTGATCTGTGGGTATCCGTTACTCTTAGCTGTTaGTTTGGGTCTCAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: EVGQTEVTEARWADLWVSVTLSC*FGSQAG Trigger: CCCTGCCTGAGACCCAAATCAACAGCTAAGAGTAAC...GGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCTTGTACAATGGCACAGTaGGGAAGTGGTTGGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GRPRNQSSMPLRSGVTAACTMAQ*GSGWGK Trigger: CTTTCCCCAACCACTTCCTCACTGTGCCATTGTACA...AGCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCTCTGTCTCAGAAGCCAGGATaGGCATGCCAAGAAGAACGT | + |
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Preference number: 2 (lower is better) Translates to: RPRNQSSMPLRSGVTAALSQKPG*ACQEER Trigger: ACGTTCTTCTTGGCATGCTCATCCTGGCTTCTGAGA...CAGAGCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCTCTGCCATGGCCTTTGTGCATGTaGTCAGTTCTTTGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PRNQSSMPLRSGVTAALPWPLCM*SVLCLL Trigger: CAGAAGGCAAAGAACTGATCACATGCACAAAGGCCA...TGGCAGAGCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCTCTGCCATGGGTATCCATCCTTTaGATAACTCTCAGAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PRNQSSMPLRSGVTAALPWVSIL*ITLRSQ Trigger: CTGGCTTCTGAGAGTTATGCAAAGGATGGATACCCA...TGGCAGAGCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCCACATCTGTGTGCTTGCAGGGAAGACCCAGAAATCAAAGCTCAATGCCGAAGAACGTGTACAATaGCACAGTGAGGAAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: RAHICVLAGKTQKSKLNAEERVQ*HSEEVV Trigger: AACCACTTCCTCACTGTGCCATTGTACACGTTCTTC...GGCATTGAGCTTTGATTTCTGGGTCTTCCCTGCAAGCACACAGATGTGGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAGGACAAACTGAGGTCACAGAAGCGAGATGGGCTGATCTGTGGGTATCCCCTTGGTCTTTTTCCTaGTTCCTGATAATTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: EVGQTEVTEARWADLWVSPWSFS*FLIIWT Trigger: TGTCCAAATTATCAGGAAGCAGGAAAAAGACCAAGG...GGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCAGTTCTTTGCCTTCTGGCCATCTGAAAATGCATTTGAGATGACCAACTGCTTCCTGATAATTTaGACAGCACAGCTGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: CDQFFAFWPSENAFEMTNCFLII*TAQLRS Trigger: GCTTCTCAGCTGTGCTGTCCAAATTATCAGGAAGCA...GTTGGTCATCTCAAATGCATTTTCAGATGGCCAGAAGGCAAAGAACTGATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | TTGGACAGCACAGCTGAGAAGCGGCACTGCCAGGTCTaGGTTAGTGCATGGTGGGGTAGGGTGGGAGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LDSTAEKRHCQV*VSAWWGRVGGP Trigger: AGGCCCTCCCACCCTACCCCACCATGCACTAACCCAGACCTGGCAGTGCCGCTTCTCAGCTGTGCTGTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR TCA 72 bp | ACCAGGAGGAAGAGCGGGCCAGGGCAGAAGGCACTCTaGTGGAGGAGCAAGCCCAAGGCTAGCCTTGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: TRRKSGPGQKAL*WRSKPKASLGL Trigger: AAGACCAAGGCTAGCCTTGGGCTTGCTCCTCCATCAGAGTGCCTTCTGCCCTGGCCCGCTCTTCCTCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR GCA 72 bp | ACTGCAGGTATTCAGTGGAGCCAGGTGGGCGCCGTCTaGCAGTCCCAGTGGGAGTACTTGAAGCACTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: TAGIQWSQVGAV*QSQWEYLKHFH Trigger: GTGGAAGTGCTTCAAGTACTCCCACTGGGACTGGCAGACGGCGCCCACCTGGCTCCACTGAATACCTGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR GCA 72 bp | AGCTGCCCGACATCTCCCAGCCCGTCTATGCTCCACTaGACAGGCTTCCTTACTGAAGGGGAGGCTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: SCPTSPSPSMLH*TGFLTEGEAQT Trigger: TGTTTGAGCCTCCCCTTCAGTAAGGAAGCCTGTGCAGTGGAGCATAGACGGGCTGGGAGATGTCGGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR GCA 72 bp | TCTAAAGCAGCTGCCCGACATCTCCCAGCCCGTCTATaGTCCACTGCACAGGCTTCCTTACTGAAGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SKAAARHLPARL*STAQASLLKGR Trigger: CCTCCCCTTCAGTAAGGAAGCCTGTGCAGTGGAGCATAGACGGGCTGGGAGATGTCGGGCAGCTGCTTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR TCA 72 bp | CAGCCCGTCTATGCTCCACTGCACAGGCTTCCTTACTaGAGGGGAGGCTCAAACACAAGGGTAGACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: QPVYAPLHRLPY*RGGSNTRVDRR Trigger: TCTTCTGTCTACCCTTGTGTTTGAGCCTCCCCTTCAGTAAGGAAGCCTGTGCAGTGGAGCATAGACGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | AGGAAGTGGTTGGGGAAAGGAGTATCTTTCGCATCCTaGTACACCACACCTCTACTGTCCCCACTCTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: RKWLGKGVSFAS*YTTPLLSPLSR Trigger: TCGGGAGAGTGGGGACAGTAGAGGTGTGGTGTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR TCA 72 bp | CACAGGCAGCAGGTGTTCTGGGTTACTCTTAGCTGTTaGTTTGGGTCTCAGGCAGGGCTTGCAAAAGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: HRQQVFWVTLSC*FGSQAGLAKEA Trigger: TGCTTCTTTTGCAAGCCCTGCCTGAGACCCAAATCAACAGCTAAGAGTAACCCAGAACACCTGCTGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR GCA 72 bp | GAAGCGAGATGGGCTGATCTGTGGGTATCCATCCTTTaGATAACTCTCAGAAGCCAGGATGAGCATGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: EARWADLWVSIL*ITLRSQDEHAK Trigger: CTTGGCATGCTCATCCTGGCTTCTGAGAGTTATGCAAAGGATGGATACCCACAGATCAGCCCATCTCGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | CCCAGCCAAGGCACTCAGGCAGTCAAGCATAAGGCATaGGCACAGAGTCTGTTTTCTGACATTACAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: PSQGTQAVKHKA*AQSLFSDITIP Trigger: AGGGATTGTAATGTCAGAAAACAGACTCTGTGCCCATGCCTTATGCTTGACTGCCTGAGTGCCTTGGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCCACATGGAACAGAGCACAGTGACCCGGATGGGACCCAAATTAGGTTCCATCTGCTTCCTGATAATTaGGACAGCACAGCTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LPHGTEHSDPDGTQIRFHLLPDN*DSTAEK Trigger: CTTCTCAGCTGTGCTGTCCAAATTATCAGGAAGCAG...ATGGAACCTAATTTGGGTCCCATCCGGGTCACTGTGCTCTGTTCCATGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR CAA 90 bp | TTGGTCTTCCCAGCAGTGAACTGCAGGTATTCAGTGGAGCCAGGTGGGCGCCGTAAAGTCCGGATTTTATaGTTATCCTGTGTTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LVFPAVNCRYSVEPGGRRKVRIL*LSCVWL Trigger: AAGCCAAACACAGGATAACAATAAAATCCGGACTTT...ACGGCGCCCACCTGGCTCCACTGAATACCTGCAGTTCACTGCTGGGAAGACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCACAGTGAGGAAGTGGTaGGGGAAAGGAGTATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: GKTQKSKLNATEVWCNCSTVRKW*GKGVSF Trigger: GAAAGATACTCCTTTCCCCAACCACTTCCTCACTGT...GCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | GCCAAGAAGAACGTGTACAATGGCACAGTGAGGAAGTaGTTGGGGAAAGGAGTATCTTTCGCATCCTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: AKKNVYNGTVRK*LGKGVSFASWY Trigger: GTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCTCACTGTGCCATTGTACACGTTCTTCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | GAAACCTCAAGGAATATGGAAATAAAGGCTAGACCCTaGAGTGGTGAAAGAGTAGGGCCCTGGGTGTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ETSRNMEIKARP*SGERVGPWVLA Trigger: AGCCAACACCCAGGGCCCTACTCTTTCACCACTCCAGGGTCTAGCCTTTATTTCCATATTCCTTGAGGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | ACAGAGGTAGGACAAACTGAGGTCACAGAAGCGAGATaGGCTGATCTGTGGGTATCCATCCTTTGCATAACT | + |
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Preference number: 3 (lower is better) Translates to: TEVGQTEVTEAR*ADLWVSILCIT Trigger: AGTTATGCAAAGGATGGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR TCA 72 bp | GGTATCCATCCTTTGCATAACTCTCAGAAGCCAGGATaGGCATGCCAAGAAGAACGTGTACAATGGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: GIHPLHNSQKPG*ACQEERVQWHS Trigger: ACTGTGCCATTGTACACGTTCTTCTTGGCATGCTCATCCTGGCTTCTGAGAGTTATGCAAAGGATGGATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR GCA 72 bp | CTTGAACTCACAGAAATCCACCTGCCACCACTAGGCTaGTCGAGTAATTTTTATCAGAGCCCACATCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LELTEIHLPPLG*SSNFYQSPHLC Trigger: ACACAGATGTGGGCTCTGATAAAAATTACTCGAGCAGCCTAGTGGTGGCAGGTGGATTTCTGTGAGTTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | GGTATGTGTAGATACACAAGGGGGCAGTCTTCACTGTaGCCTGTAAAACCCTATCCTCTCGCAATAATCTTT | + |
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Preference number: 3 (lower is better) Translates to: GMCRYTRGQSSL*PVKPYPLAIIF Trigger: AAAGATTATTGCGAGAGGATAGGGTTTTACAGGCCACAGTGAAGACTGCCCCCTTGTGTATCTACACATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CCA 72 bp | CTTGGCCTTTGTGCATGTGATCAGTTCTTTGCCTTCTaGCCATCTGAAAATGCATTTGAGATGACCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: LGLCACDQFFAF*PSENAFEMTNF Trigger: AAAGTTGGTCATCTCAAATGCATTTTCAGATGGCCAGAAGGCAAAGAACTGATCACATGCACAAAGGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR TCA 90 bp | CCTGGTACACCACACCTCTACTGTCCCCACTCTCCCGACCAGGCAGCCCAGCCATGTCGTTCAGCCCTTTaGACACTTGCTGCTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PGTPHLYCPHSPDQAAQPCRSAL*TLAAVP Trigger: GGGGACAGCAGCAAGTGTTCAAAGGGCTGAACGACA...TGGCTGGGCTGCCTGGTCGGGAGAGTGGGGACAGTAGAGGTGTGGTGTACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GAGGTAGGACAAACTGAGGTCACAGAAGCGAGATGGGCTGATCTGTGGGTATCCCCTTTGAACACTTGCTaGTGTCCCCGGCCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EVGQTEVTEARWADLWVSPLNTC*CPRPSP Trigger: GGGGCTGGGCCGGGGACAGCAGCAAGTGTTCAAAGG...GGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GAGGTAGGACAAACTGAGGTCACAGAAGCGAGATGGGCTGATCTGTGGGTATCCATGATGACCTTCCCTTaGCTGAGCCCCACGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: EVGQTEVTEARWADLWVSMMTFP*LSPTAT Trigger: CGTGGCCGTGGGGCTCAGGCAAGGGAAGGTCATCAT...GGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GGCACTCAGGCAGTCAAGCATAAGGCATGGGCACAGAGTCTGTTTTCTGACATTCACACCCACTTCGTCTaGCAGCGTGGCAGCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: GTQAVKHKAWAQSLFSDIHTHFV*QRGSTH Trigger: GTGGGTGCTGCCACGCTGGCAGACGAAGTGGGTGTG...AATGTCAGAAAACAGACTCTGTGCCCATGCCTTATGCTTGACTGCCTGAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GAGGAAGTGGTTGGGGAAAGGAGTATCTTTCGCATCCTGGTACACCACACCTCTGTTGATGTCAGCCCCTaGGACAAAGCAGCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EEVVGERSIFRILVHHTSVDVSP*DKAARL Trigger: AAGCCTGGCTGCTTTGTCGCAGGGGCTGACATCAAC...AGAGGTGTGGTGTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| 3UTR CAA 72 bp | AGGCTAGCCTTGGTCTTTTTCCTGCTTCCTGATAATTaGGACAGCACAGCTGAGAAGCGGCACTGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RLALVFFLLPDN*DSTAEKRHCQV Trigger: GACCTGGCAGTGCCGCTTCTCAGCTGTGCTGTCCAAATTATCAGGAAGCAGGAAAAAGACCAAGGCTAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CCA 90 bp | CTGCTTCCTGATAATTTGGACAGCACAGCTGAGAAGCGGCACTGCCAGGTCTGGTGTATTGGCATGCTATaGCAAGCTCAAGTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLPDNLDSTAEKRHCQVWCIGML*QAQVLL Trigger: GAGGAGGACTTGAGCTTGCCATAGCATGCCAATACA...CCAGACCTGGCAGTGCCGCTTCTCAGCTGTGCTGTCCAAATTATCAGGAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CCA 90 bp | GAGGTAGGACAAACTGAGGTCACAGAAGCGAGATGGGCTGATCTGTGGGTATCCGAGGAGCAGCTGGCATaGGGTAAACTGTGTTCCATA | + |
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Preference number: 4 (lower is better) Translates to: EVGQTEVTEARWADLWVSEEQLA*GKLCSI Trigger: TATGGAACACAGTTTACCCCATGCCAGCTGCTCCTC...GGATACCCACAGATCAGCCCATCTCGCTTCTGTGACCTCAGTTTGTCCTACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CCA 90 bp | GGGTTCCTTGAACTCACAGAAATCCACCTGCCACCACTAGGCTGCTCGAGTAATTGGTCGAGGAGCAGCTaGCATGGGGTAAACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: GFLELTEIHLPPLGCSSNWSRSS*HGVNCV Trigger: AACACAGTTTACCCCATGCCAGCTGCTCCTCGACCA...ATTACTCGAGCAGCCTAGTGGTGGCAGGTGGATTTCTGTGAGTTCAAGGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR TCA 90 bp | GCAGTCTTCACTGTGGCCTGTAAAACCCTATCCTCTCGCAATAATCTTTTTCTTCCAAGCAGGATCCACTaGTGGCGGCCACAACGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AVFTVACKTLSSRNNLFLPSRIH*WRPQRA Trigger: AGCCCGTTGTGGCCGCCATCAGTGGATCCTGCTTGG...AAGAAAAAGATTATTGCGAGAGGATAGGGTTTTACAGGCCACAGTGAAGACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GAGGAAGTGGTTGGGGAAAGGAGTATCTTTCGCATCCTGGTACACCACACCTCTGCTCCCCAAAGGCTTTaGCTAGATCTTCTGCTACGT | + |
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Preference number: 4 (lower is better) Translates to: EEVVGERSIFRILVHHTSAPQRL*LDLLLR Trigger: ACGTAGCAGAAGATCTAGGCAAAGCCTTTGGGGAGC...AGAGGTGTGGTGTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CCA 90 bp | GGGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCACAGCACTCCTGATTTaGTCGTTGGCCCAGATTTCG | + |
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Preference number: 4 (lower is better) Translates to: GKTQKSKLNATEVWCNCSTALLI*SLAQIS Trigger: CGAAATCTGGGCCAACGACCAAATCAGGAGTGCTGT...GCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR TCA 90 bp | CAATCCCTGTCTAAAGCAGCTGCCCGACATCTCCCAGCCCGTCTATGCTCCACTTTCTCAAACATTCTCTaGCCTTCCTGTGATATTCGT | + |
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Preference number: 4 (lower is better) Translates to: QSLSKAAARHLPARLCSTFSNIL*PSCDIR Trigger: ACGAATATCACAGGAAGGTCAGAGAATGTTTGAGAA...AGTGGAGCATAGACGGGCTGGGAGATGTCGGGCAGCTGCTTTAGACAGGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GGGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCTTTCCACAAGGCCTTTaGTCTGCTTTGCAGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: GKTQKSKLNATEVWCNCSFPQGL*SALQRL Trigger: AAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAA...GCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTGATCTGTGGGTATCCATCCTTTGCATAACTCTCAGAAGCCAGGATGAGGACCTAAGAAGCCCTTaGAGACCATCTGTTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WADLWVSILCITLRSQDEDLRSP*RPSVSA Trigger: TGCTGAAACAGATGGTCTCCAAGGGCTTCTTAGGTC...CTCATCCTGGCTTCTGAGAGTTATGCAAAGGATGGATACCCACAGATCAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | TGTGATCAGTTCTTTGCCTTCTGGCCATCTGAAAATGCATTTGAGATGACCAACACAAGGCCTTTGCTCTaGTTTGCAGAGACTTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: CDQFFAFWPSENAFEMTNTRPLL*FAETFR Trigger: TCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGT...GTTGGTCATCTCAAATGCATTTTCAGATGGCCAGAAGGCAAAGAACTGATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR GCA 90 bp | GCAGTCTTCACTGTGGCCTGTAAAACCCTATCCTCTCGCAATAATCTTTTTCTTCAAATTTATTTTTCTTaGACAGGACCTGGCCGTTAT | + |
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Preference number: 4 (lower is better) Translates to: AVFTVACKTLSSRNNLFLQIYFS*TGPGRY Trigger: ATAACGGCCAGGTCCTGTGCAAGAAAAATAAATTTG...AAGAAAAAGATTATTGCGAGAGGATAGGGTTTTACAGGCCACAGTGAAGACTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | AGCACAGCTGAGAAGCGGCACTGCCAGGTCTGGGTTAGTGCATGGTGGGGTAGGCGACCTAAGAAGCCCTaGGAGACCATCTGTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: STAEKRHCQVWVSAWWGRRPKKP*ETICFS Trigger: GCTGAAACAGATGGTCTCCAAGGGCTTCTTAGGTCG...CCTACCCCACCATGCACTAACCCAGACCTGGCAGTGCCGCTTCTCAGCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | GGGTTCCTTGAACTCACAGAAATCCACCTGCCACCACTAGGCTGCTCGAGTAATAATGATGACCTTCCCTaGCCTGAGCCCCACGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GFLELTEIHLPPLGCSSNNDDLP*PEPHGH Trigger: GTGGCCGTGGGGCTCAGGCAAGGGAAGGTCATCATT...ATTACTCGAGCAGCCTAGTGGTGGCAGGTGGATTTCTGTGAGTTCAAGGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | GAGGAAGTGGTTGGGGAAAGGAGTATCTTTCGCATCCTGGTACACCACACCTCTGAGGAGACCTCGGGCTaGGCAGGCAGCCTCAGATTT | + |
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Preference number: 5 (lower is better) Translates to: EEVVGERSIFRILVHHTSEETSG*AGSLRF Trigger: AAATCTGAGGCTGCCTGCCAAGCCCGAGGTCTCCTC...AGAGGTGTGGTGTACCAGGATGCGAAAGATACTCCTTTCCCCAACCACTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | GGGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCTTGTCGTTCAGCCCTTaGAACACTTGCTGCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GKTQKSKLNATEVWCNCSLSFSP*NTCCCP Trigger: GGGACAGCAGCAAGTGTTCAAAGGGCTGAACGACAA...GCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS GCA 90 bp | ATGGGACAGTCATGGCATACGTTGTCAGCTTTTCCACAAGGCCTTTaGTCTGCTTTGCAGAGACTTTCCGATCAGCCAGGCCTTTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: MGQSWHTLSAFPQGL*SALQRLSDQPGLWQ Trigger: TTGCCAAAGGCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAAGCTGACAACGTATGCCATGACTGTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | GGCACTCAGGCAGTCAAGCATAAGGCATGGGCACAGAGTCTGTTTTCTGACATTGGCCTTTGCTCTGCTTaGCAGAGACTTTCCGATCAG | + |
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Preference number: 5 (lower is better) Translates to: GTQAVKHKAWAQSLFSDIGLCSA*QRLSDQ Trigger: CTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCC...AATGTCAGAAAACAGACTCTGTGCCCATGCCTTATGCTTGACTGCCTGAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | AGAGCCCACATCTGTGTGCTTGCAGGGAAGACCCAGAAATCAAAGCTCAATGCCAACTTCTTGCTAGAGTaGTTAGCGTGGTCGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RAHICVLAGKTQKSKLNANFLLE*LAWSRS Trigger: GCTCCTCGACCACGCTAACAACTCTAGCAAGAAGTT...GGCATTGAGCTTTGATTTCTGGGTCTTCCCTGCAAGCACACAGATGTGGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | GGGAAGACCCAGAAATCAAAGCTCAATGCCACTGAGGTCTGGTGTAACTGCAGCACTTCCTTTAACACTTaGTGCTTTACACCGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: GKTQKSKLNATEVWCNCSTSFNT*CFTPRS Trigger: GGACCTCGGTGTAAAGCACAAAGTGTTAAAGGAAGT...GCTGCAGTTACACCAGACCTCAGTGGCATTGAGCTTTGATTTCTGGGTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | TGGGCTGATCTGTGGGTATCCATCCTTTGCATAACTCTCAGAAGCCAGGATGAGCCTCTAGGTATTCAATaGTCCTTTCTTCTGGTGATT | + |
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Preference number: 5 (lower is better) Translates to: WADLWVSILCITLRSQDEPLGIQ*SFLLVI Trigger: AATCACCAGAAGAAAGGACAATTGAATACCTAGAGG...CTCATCCTGGCTTCTGAGAGTTATGCAAAGGATGGATACCCACAGATCAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTCACTGTGGCCTGTAAAACCCTATCCTCTCGCAATAATCTTTTTCTTTTTTCCACAAGGCCTTaGCTCTGCTTTGCAGAGACT | + |
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Preference number: 5 (lower is better) Translates to: AVFTVACKTLSSRNNLFLFSTRP*LCFAET Trigger: AGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAA...AAGAAAAAGATTATTGCGAGAGGATAGGGTTTTACAGGCCACAGTGAAGACTGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS-3UTR CAA 90 bp | TGTGATCAGTTCTTTGCCTTCTGGCCATCTGAAAATGCATTTGAGATGACCAACGCTTTCTTCTTCACTTaGTCGTTCAGCCCTTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: CDQFFAFWPSENAFEMTNAFFFT*SFSPLN Trigger: GTTCAAAGGGCTGAACGACAAAGTGAAGAAGAAAGC...GTTGGTCATCTCAAATGCATTTTCAGATGGCCAGAAGGCAAAGAACTGATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 72 bp | CGGTATTGGACGTCTTCATCAGAGGAGACCTCGGGCTaGGCAGGCAGCCTCAGATTTGCCAAGATATTATCC | + |
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Preference number: 6 (lower is better) Translates to: RYWTSSSEETSG*AGSLRFAKILS Trigger: GGATAATATCTTGGCAAATCTGAGGCTGCCTGCCAAGCCCGAGGTCTCCTCTGATGAAGACGTCCAATACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 90 bp | AATGGGACAGTCATGGCATACGTTGTCAGCTTTTCCACAAGGCCTTaGCTCTGCTTTGCAGAGACTTTCCGATCAGCCAGGCCTTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: NGTVMAYVVSFSTRP*LCFAETFRSARPLA Trigger: TGCCAAAGGCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAAGCTGACAACGTATGCCATGACTGTCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS GCA 72 bp | GCATACGTTGTCAGCTTTTCCACAAGGCCTTTGCTCTaGTTTGCAGAGACTTTCCGATCAGCCAGGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: AYVVSFSTRPLL*FAETFRSARPL Trigger: CAAAGGCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAAGCTGACAACGTATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS GCA 72 bp | TCATGGCATACGTTGTCAGCTTTTCCACAAGGCCTTTaGTCTGCTTTGCAGAGACTTTCCGATCAGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SWHTLSAFPQGL*SALQRLSDQPG Trigger: GCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAAGCTGACAACGTATGCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 72 bp | ACGTTGTCAGCTTTTCCACAAGGCCTTTGCTCTGCTTaGCAGAGACTTTCCGATCAGCCAGGCCTTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TLSAFPQGLCSA*QRLSDQPGLWQ Trigger: TTGCCAAAGGCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAAGCTGACAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 72 bp | GTCATGGCATACGTTGTCAGCTTTTCCACAAGGCCTTaGCTCTGCTTTGCAGAGACTTTCCGATCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VMAYVVSFSTRP*LCFAETFRSAR Trigger: CCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCTTGTGGAAAAGCTGACAACGTATGCCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 90 bp | GTTATCACACGGTATTGGACGTCTTCATCAGAGGAGACCTCGGGCTaGGCAGGCAGCCTCAGATTTGCCAAGATATTATCCATTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VITRYWTSSSEETSG*AGSLRFAKILSISE Trigger: TTCTGAAATGGATAATATCTTGGCAAATCTGAGGCTGCCTGCCAAGCCCGAGGTCTCCTCTGATGAAGACGTCCAATACCGTGTGATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 90 bp | AGGCCTTTGCTCTGCTTTGCAGAGACTTTCCGATCAGCCAGGCCTTaGGCAAAATTAACTGCAACTTCCTCTAGGTATTCAATTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RPLLCFAETFRSARP*AKLTATSSRYSIVL Trigger: AAGGACAATTGAATACCTAGAGGAAGTTGCAGTTAATTTTGCCAAAGGCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAGCAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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| CDS CAA 72 bp | CTCTGCTTTGCAGAGACTTTCCGATCAGCCAGGCCTTaGGCAAAATTAACTGCAACTTCCTCTAGGTATTCA | + |
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Preference number: 6 (lower is better) Translates to: LCFAETFRSARP*AKLTATSSRYS Trigger: TGAATACCTAGAGGAAGTTGCAGTTAATTTTGCCAAAGGCCTGGCTGATCGGAAAGTCTCTGCAAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156859.3 |
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