Pregenerated sensors for HADH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027984Ensembl transcript IDs: ENSMUST00000029610.9
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATTACTTCAGAGAGACTGCAAGGGAGGGCCCACTGAGCCGCCCCTaGCAAGCCTCGGTACCACCTGCCCAGGGCTTGCTCATCCTTGTC | + |
|
Preference number: 1 (lower is better) Translates to: DYFRETAREGPLSRP*QASVPPAQGLLILV Trigger: GACAAGGATGAGCAAGCCCTGGGCAGGTGGTACCGAGGCTTGCCAGGGGCGGCTCAGTGGGCCCTCCCTTGCAGTCTCTCTGAAGTAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR GCA 90 bp | TTCCTGTCAGGCCCAGAATGTAGGCTAAGGCTCGAGGCTGCAGGCTaGAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: FLSGPECRLRLEAAG*KCSQAGKTSRPTGC Trigger: GCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTGCAGCCTGCAGCCTCGAGCCTTAGCCTACATTCTGGGCCTGACAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CAA 90 bp | CCACTGAGCCGCCCCTGGCAAGCCTCGGTACCACCTGCCCAGGGCTaGCTCATCCTTGTCCCATGGCTGGCTGGAGGTGTTGCTGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLSRPWQASVPPAQG*LILVPWLAGGVAGG Trigger: TCCCCCAGCAACACCTCCAGCCAGCCATGGGACAAGGATGAGCAAGCCCTGGGCAGGTGGTACCGAGGCTTGCCAGGGGCGGCTCAGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGACTGCAAGGGAGGGCCCACTGAGCCGCCCCTGGCAAGCCTCGGTACCACCTTCCTTGTCCCATGGCTaGCTGGAGGTGTTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ETAREGPLSRPWQASVPPSLSHG*LEVLLG Trigger: CCCCAGCAACACCTCCAGCCAGCCATGGGACAAGGA...AGGTGGTACCGAGGCTTGCCAGGGGCGGCTCAGTGGGCCCTCCCTTGCAGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCACCACTCCAGGAGTCCTGGTGTGGGGTAAAGAAAGACAGAACATTTCCTAGGCCCCGTGGCTCCTaGCCCTGGGGTTCAACACCG | + |
|
Preference number: 2 (lower is better) Translates to: CPPLQESWCGVKKDRTFPRPRGS*PWGSTP Trigger: CGGTGTTGAACCCCAGGGGCAGGAGCCACGGGGCCT...AGGAAATGTTCTGTCTTTCTTTACCCCACACCAGGACTCCTGGAGTGGTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAATACTCATTTTCAGAAGACCTGAGGGAATGAGTCTAAGCAACGCTTTTTACTTACTTCAGAGAGACTaGAAGGGAGGGCCCACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RILIFRRPEGMSLSNAFYLLQRD*KGGPTE Trigger: CTCAGTGGGCCCTCCCTTGCAGTCTCTCTGAAGTAA...GTAAAAAGCGTTGCTTAGACTCATTCCCTCAGGTCTTCTGAAAATGAGTATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CAA 90 bp | TACAAATTAAAAGATTTCATTTTAGTAGAGTCAATTCATAGGCACTaGGTAGCACAGATTTCACCGGAAGAAACAAGAAGGACGGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: YKLKDFILVESIHRH*VAQISPEETRRTDS Trigger: ACTGTCCGTCCTTCTTGTTTCTTCCGGTGAAATCTGTGCTACCAAGTGCCTATGAATTGACTCTACTAAAATGAAATCTTTTAATTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR GCA 72 bp | CCCACTGAGCCGCCCCTGGCAAGCCTCGGTACCACCTaGCCAGGGCTTGCTCATCCTTGTCCCATGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PTEPPLASLGTT*PGLAHPCPMAG Trigger: GCCAGCCATGGGACAAGGATGAGCAAGCCCTGGGCAGGTGGTACCGAGGCTTGCCAGGGGCGGCTCAGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CCA 72 bp | AGAGAGACTGCAAGGGAGGGCCCACTGAGCCGCCCCTaGCAAGCCTCGGTACCACCTGCCCAGGGCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RETAREGPLSRP*QASVPPAQGLL Trigger: GAGCAAGCCCTGGGCAGGTGGTACCGAGGCTTGCCAGGGGCGGCTCAGTGGGCCCTCCCTTGCAGTCTCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR GCA 72 bp | GCCCCTGGCAAGCCTCGGTACCACCTGCCCAGGGCTTaGTCATCCTTGTCCCATGGCTGGCTGGAGGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: APGKPRYHLPRA*SSLSHGWLEVL Trigger: CAACACCTCCAGCCAGCCATGGGACAAGGATGAGCAAGCCCTGGGCAGGTGGTACCGAGGCTTGCCAGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR TCA 72 bp | AAGATTACTTCAGAGAGACTGCAAGGGAGGGCCCACTaGGCCGCCCCTGGCAAGCCTCGGTACCACCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KITSERLQGRAH*AAPGKPRYHLP Trigger: GGGCAGGTGGTACCGAGGCTTGCCAGGGGCGGCTCAGTGGGCCCTCCCTTGCAGTCTCTCTGAAGTAATCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CCA 72 bp | CAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTaGCTGCTGCCCTTGGGTGCATCTGTAGGCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: QMFPGRQDLTSY*LLPLGASVGPV Trigger: CACGGGGCCTACAGATGCACCCAAGGGCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CCA 72 bp | CTTGGGTGCATCTGTAGGCCCCGTGGCTCCTGCCCCTaGGGTTCAACACCGATAAACATAGAATACTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LGCICRPRGSCP*GSTPINIEYSF Trigger: AAATGAGTATTCTATGTTTATCGGTGTTGAACCCCAGGGGCAGGAGCCACGGGGCCTACAGATGCACCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CCA 72 bp | AAGCTCACAGGTATTTGCCCACCACTCCAGGAGTCCTaGTGTGGGGTAAAGAAAGACAGAACATTTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KLTGICPPLQES*CGVKKDRTFPV Trigger: GACAGGAAATGTTCTGTCTTTCTTTACCCCACACCAGGACTCCTGGAGTGGTGGGCAAATACCTGTGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CAA 72 bp | GGCAGGCAAGACCTCACGTCCTACTGGCTGCTGCCCTaGGGTGCATCTGTAGGCCCCGTGGCTCCTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRQDLTSYWLLP*GASVGPVAPAP Trigger: AGGGGCAGGAGCCACGGGGCCTACAGATGCACCCAAGGGCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGCTGCCCCAGCTACCTGCGCGATaGCGGCGCCCATCAGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQMFPGRQDLTSYWLLPQLPAR*RRPSAR Trigger: GCGGGCTGATGGGCGCCGGCATCGCGCAGGTAGCTG...GGGCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTGCAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CAA 72 bp | CGCCCCTGGCAAGCCTCGGTACCACCTGCCCAGGGCTaGCTCATCCTTGTCCCATGGCTGGCTGGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPWQASVPPAQG*LILVPWLAGGV Trigger: AACACCTCCAGCCAGCCATGGGACAAGGATGAGCAAGCCCTGGGCAGGTGGTACCGAGGCTTGCCAGGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR GCA 90 bp | GTACCACCTGCCCAGGGCTTGCTCATCCTTGTCCCATGGCTGGCTGGAGGTGTTGTTGCTGCAGCTACCTaGGCGATGCCGGCGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VPPAQGLLILVPWLAGGVVAAAT*AMPAPI Trigger: GATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAAC...AACACCTCCAGCCAGCCATGGGACAAGGATGAGCAAGCCCTGGGCAGGTGGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTGCAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGCTGCACGGGGTTGAAAAAGTaGAGGCCAGCAAATCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGCKCSQAGKTSRPTGCCTGLKK*RPANRS Trigger: AGACCGATTTGCTGGCCTCCACTTTTTCAACCCCGT...GCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTGCAGCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGCTGCCCAAGAAGACGTGTTGCTaGCAAAGATGGTGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLQMFPGRQDLTSYWLLPKKTCC*QRWCVL Trigger: CAGAACACACCATCTTTGCCAGCAACACGTCTTCTT...GGGCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGCTGCCCTTGGGTGCATCTGTATTCATGGAAGGACTaGGCTGAAATAAGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQAGKTSRPTGCCPWVHLYSWKD*AEIRGS Trigger: AGAACCCCTTATTTCAGCCCAGTCCTTCCATGAATA...CAGATGCACCCAAGGGCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTATTTGCCCACCACTCCAGGAGTCCTGGTGTGGGGTAAAGAAAGACAGAATGGAAGGACTGGGCTaGAATAAGGGGTTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGICPPLQESWCGVKKDRMEGLG*NKGFSG Trigger: GCCAGAGAACCCCTTATTTCAGCCCAGTCCTTCCAT...TCTGTCTTTCTTTACCCCACACCAGGACTCCTGGAGTGGTGGGCAAATACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | TCAATTCATAGGCACTTGGTAGCACAGATTTCACCGGAAGAAACAAGAAGGACGGCTCAAACGGACCCATaGGATACCCAGCTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIHRHLVAQISPEETRRTAQTDP*DTQLPA Trigger: AGCTGGGAGCTGGGTATCCCATGGGTCCGTTTGAGC...CGTCCTTCTTGTTTCTTCCGGTGAAATCTGTGCTACCAAGTGCCTATGAATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGGAATGAGTCTAAGCAACGCTTTTTACAAAAAGTGGCAAGGTTCAGGAAGGAAGAGGAGGACATaGAGCGCAAGAATTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEGMSLSNAFYKKWQGSGRKRRT*SARIAW Trigger: CCAGGCAATTCTTGCGCTCCATGTCCTCCTCTTCCT...TCCTGAACCTTGCCACTTTTTGTAAAAAGCGTTGCTTAGACTCATTCCCTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR TCA 90 bp | CATAGAATACTCATTTTCAGAAGACCTGAGGGAATGAGTCTAAGCAACGCTTTTCGCATCGGTGCTGGTTaGAAGGCAGCTCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRILIFRRPEGMSLSNAFRIGAG*KAAQGL Trigger: AAGACCCTGAGCTGCCTTTCAACCAGCACCGATGCG...AAAAGCGTTGCTTAGACTCATTCCCTCAGGTCTTCTGAAAATGAGTATTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACCCCATGACTGCAACTAGTCAAAAGATTACTTCAGAGAGACTGCAAGGGAACTTGTCCAGCCTCTaGAACAGCTCGTTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNPMTATSQKITSERLQGNLSSL*NSSFFS Trigger: GCTGAAGAACGAGCTGTTCCAGAGGCTGGACAAGTT...CCCTTGCAGTCTCTCTGAAGTAATCTTTTGACTAGTTGCAGTCATGGGGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCCACCACTCCAGGAGTCCTGGTGTGGGGTAAAGAAAGACAGAACATTTCCTTGCAAGAGACAGGATaGTTTCCTAAGGTTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTTPGVLVWGKERQNISLQETG*FPKVLQ Trigger: TTGTAAAACCTTAGGAAAGCATCCTGTCTCTTGCAA...GGAAATGTTCTGTCTTTCTTTACCCCACACCAGGACTCCTGGAGTGGTGGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGGAATGAGTCTAAGCAACGCTTTTTACAAAAAGTGGCAAGGTTCAGGAACCAATACTACTGTATaGCCAGTTGCTGCAGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PEGMSLSNAFYKKWQGSGTNTTV*PVAAAT Trigger: GGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGT...TCCTGAACCTTGCCACTTTTTGTAAAAAGCGTTGCTTAGACTCATTCCCTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR TCA 90 bp | AGAATACTCATTTTCAGAAGACCTGAGGGAATGAGTCTAAGCAACGCTTTTTACAGAGTCGGTTCACGATaGATCCAGGAGTGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RILIFRRPEGMSLSNAFYRVGSR*IQECPC Trigger: GCAAGGACACTCCTGGATTCATCGTGAACCGACTCT...GTAAAAAGCGTTGCTTAGACTCATTCCCTCAGGTCTTCTGAAAATGAGTATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CCA 90 bp | ATACTCATTTTCAGAAGACCTGAGGGAATGAGTCTAAGCAACGCTTTTTACAAATTGCCCAGCTTCTTCTaGGCCACCAGATTATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILIFRRPEGMSLSNAFYKLPSFF*ATRLFM Trigger: CATGAATAATCTGGTGGCCCAGAAGAAGCTGGGCAA...TTTGTAAAAAGCGTTGCTTAGACTCATTCCCTCAGGTCTTCTGAAAATGAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| 3UTR CAA 72 bp | AAAGATTTCATTTTAGTAGAGTCAATTCATAGGCACTaGGTAGCACAGATTTCACCGGAAGAAACAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KDFILVESIHRH*VAQISPEETRR Trigger: CCTTCTTGTTTCTTCCGGTGAAATCTGTGCTACCAAGTGCCTATGAATTGACTCTACTAAAATGAAATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 90 bp | TGCGCGATGCCGGCGCCCATCAGCCCGCCGCCGATGACGGTCACATaGTTGATCAGGATCTTCTTGGCGGCCGCCGACGCAGAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CAMPAPISPPPMTVT*LIRIFLAAADAEEE Trigger: CTCTTCCTCTGCGTCGGCGGCCGCCAAGAAGATCCTGATCAAGCATGTGACCGTCATCGGCGGCGGGCTGATGGGCGCCGGCATCGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 90 bp | CAGGATGTCTTCCGTTTGGTCCACCAATACTACTGTATGGCCAGTTaGTGCAGCTACCTGCGCGATGCCGGCGCCCATCAGCCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDVFRLVHQYYCMAS*CSYLRDAGAHQPAA Trigger: GGCGGCGGGCTGATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAGACATCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 90 bp | GATGTCTTCCGTTTGGTCCACCAATACTACTGTATGGCCAGTTGCTaGAGCTACCTGCGCGATGCCGGCGCCCATCAGCCCGCCGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: DVFRLVHQYYCMASC*SYLRDAGAHQPAAD Trigger: ATCGGCGGCGGGCTGATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAGACATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 90 bp | TCTTCAGCTTCAGGTTCTCCACAATGGCCTCCACCACCAGGTCTGTaGTGTGCACCACGGATGCCGCATCGGTGCTGGTTGAAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSASGSPQWPPPPGL*CAPRMPHRCWLKGS Trigger: GCTGCCTTTCAACCAGCACCGATGCGGCATCCGTGGTGCACAGCACAGACCTGGTGGTGGAGGCCATTGTGGAGAACCTGAAGCTGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | CTAGTCAAAAGATTACTTCAGAGAGACTGCAAGGGAGGGCCCACTGAGCCGCCCCTACTGTATGGCCAGTaGCTGCAGCTACCTGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LVKRLLQRDCKGGPTEPPLLYGQ*LQLPAR Trigger: TCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAG...GGGCGGCTCAGTGGGCCCTCCCTTGCAGTCTCTCTGAAGTAATCTTTTGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGCTGCCCCAGGATGTCTTCCGTTaGGTCCACCAATACTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLQMFPGRQDLTSYWLLPQDVFR*VHQYYC Trigger: ACAGTAGTATTGGTGGACCAAACGGAAGACATCCTG...GGGCAGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGCTGCAAATGTTCCCAGGCAGGCAAGACCTCACGTCCTACTGGCTGCTAATCCAGGAGTGTCCTaGCAAGAGACAGGATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQAANVPRQARPHVLLAANPGVS*QETGCF Trigger: AAAGCATCCTGTCTCTTGCAAGGACACTCCTGGATT...AGCAGCCAGTAGGACGTGAGGTCTTGCCTGCCTGGGAACATTTGCAGCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | CTAGTCAAAAGATTACTTCAGAGAGACTGCAAGGGAGGGCCCACTGAGCCGCCCTGTCTGGTGGTGGCATaGGCTATGTTTGTGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVKRLLQRDCKGGPTEPPCLVVA*AMFVIC Trigger: GCAGATCACAAACATAGCCAATGCCACCACCAGACA...GGGCGGCTCAGTGGGCCCTCCCTTGCAGTCTCTCTGAAGTAATCTTTTGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | CCTGAGGGAATGAGTCTAAGCAACGCTTTTTACAAAAAGTGGCAAGGTTCAGGATGTTCTGCAGCGAACTaGTCCAGCCTCTGGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PEGMSLSNAFYKKWQGSGCSAAN*SSLWNS Trigger: GCTGTTCCAGAGGCTGGACAAGTTCGCTGCAGAACA...TCCTGAACCTTGCCACTTTTTGTAAAAAGCGTTGCTTAGACTCATTCCCTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | AGAATACTCATTTTCAGAAGACCTGAGGGAATGAGTCTAAGCAACGCTTTTTACCCGCATCGGTGCTGGTaGAAAGGCAGCTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RILIFRRPEGMSLSNAFYPHRCW*KGSSGS Trigger: AGACCCTGAGCTGCCTTTCAACCAGCACCGATGCGG...GTAAAAAGCGTTGCTTAGACTCATTCCCTCAGGTCTTCTGAAAATGAGTATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | TCAATTCATAGGCACTTGGTAGCACAGATTTCACCGGAAGAAACAAGAAGGACGATCATAGGCACGGGGTaGAAAAAGTGGAGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIHRHLVAQISPEETRRTIIGTG*KKWRPA Trigger: TGCTGGCCTCCACTTTTTCAACCCCGTGCCTATGAT...CGTCCTTCTTGTTTCTTCCGGTGAAATCTGTGCTACCAAGTGCCTATGAATTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAAGAACCCCATGACTGCAACTAGTCAAAAGATTACTTCAGAGAGACTGCTGGTCATCGGTGTTTaGATGACCTCCACAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QWKNPMTATSQKITSERLLVIGV*MTSTSF Trigger: GAAGCTTGTGGAGGTCATCAAAACACCGATGACCAG...CAGTCTCTCTGAAGTAATCTTTTGACTAGTTGCAGTCATGGGGTTCTTCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGGAAGAACCCCATGACTGCAACTAGTCAAAAGATTACTTCAGAGAGACTGTCCTCAATTCCCTTCTaGGATTTTGCCAGGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QWKNPMTATSQKITSERLSSIPF*DFARMS Trigger: AGACATCCTGGCAAAATCCAAGAAGGGAATTGAGGA...CAGTCTCTCTGAAGTAATCTTTTGACTAGTTGCAGTCATGGGGTTCTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS-3UTR CAA 90 bp | AGAATACTCATTTTCAGAAGACCTGAGGGAATGAGTCTAAGCAACGCTTTTTACTGCAAAGAAGACGTGTaGCTGGCAAAGATGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RILIFRRPEGMSLSNAFYCKEDV*LAKMVC Trigger: ACACACCATCTTTGCCAGCAACACGTCTTCTTTGCA...GTAAAAAGCGTTGCTTAGACTCATTCCCTCAGGTCTTCTGAAAATGAGTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 72 bp | CCGGCGCCCATCAGCCCGCCGCCGATGACGGTCACATaGTTGATCAGGATCTTCTTGGCGGCCGCCGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAPISPPPMTVT*LIRIFLAAADA Trigger: TGCGTCGGCGGCCGCCAAGAAGATCCTGATCAAGCATGTGACCGTCATCGGCGGCGGGCTGATGGGCGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 90 bp | GCGATGCCGGCGCCCATCAGCCCGCCGCCGATGACGGTCACATGCTaGATCAGGATCTTCTTGGCGGCCGCCGACGCAGAGGAAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMPAPISPPPMTVTC*IRIFLAAADAEEEE Trigger: CTCCTCTTCCTCTGCGTCGGCGGCCGCCAAGAAGATCCTGATCAAGCATGTGACCGTCATCGGCGGCGGGCTGATGGGCGCCGGCATCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 72 bp | GCGCCCATCAGCCCGCCGCCGATGACGGTCACATGCTaGATCAGGATCTTCTTGGCGGCCGCCGACGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APISPPPMTVTC*IRIFLAAADAE Trigger: CTCTGCGTCGGCGGCCGCCAAGAAGATCCTGATCAAGCATGTGACCGTCATCGGCGGCGGGCTGATGGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 90 bp | ATCAGCCCGCCGCCGATGACGGTCACATGCTTGATCAGGATCTTCTaGGCGGCCGCCGACGCAGAGGAAGAGGAGGACATGGAGCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISPPPMTVTCLIRIF*AAADAEEEEDMERK Trigger: CTTGCGCTCCATGTCCTCCTCTTCCTCTGCGTCGGCGGCCGCCAAGAAGATCCTGATCAAGCATGTGACCGTCATCGGCGGCGGGCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 90 bp | CCAGGATGTCTTCCGTTTGGTCCACCAATACTACTGTATGGCCAGTaGCTGCAGCTACCTGCGCGATGCCGGCGCCCATCAGCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGCLPFGPPILLYGQ*LQLPARCRRPSARR Trigger: GCGGCGGGCTGATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAGACATCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 72 bp | CGTTTGGTCCACCAATACTACTGTATGGCCAGTTGCTaGAGCTACCTGCGCGATGCCGGCGCCCATCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLVHQYYCMASC*SYLRDAGAHQP Trigger: GGGCTGATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 72 bp | TCAGGTTCTCCACAATGGCCTCCACCACCAGGTCTGTaGTGTGCACCACGGATGCCGCATCGGTGCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSPQWPPPPGL*CAPRMPHRCWL Trigger: CAACCAGCACCGATGCGGCATCCGTGGTGCACAGCACAGACCTGGTGGTGGAGGCCATTGTGGAGAACCTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 72 bp | CCGCCGATGACGGTCACATGCTTGATCAGGATCTTCTaGGCGGCCGCCGACGCAGAGGAAGAGGAGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: PPMTVTCLIRIF*AAADAEEEEDM Trigger: CATGTCCTCCTCTTCCTCTGCGTCGGCGGCCGCCAAGAAGATCCTGATCAAGCATGTGACCGTCATCGGCGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS GCA 72 bp | TTCCGTTTGGTCCACCAATACTACTGTATGGCCAGTTaGTGCAGCTACCTGCGCGATGCCGGCGCCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: FRLVHQYYCMAS*CSYLRDAGAHQ Trigger: CTGATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 72 bp | CTTCCGTTTGGTCCACCAATACTACTGTATGGCCAGTaGCTGCAGCTACCTGCGCGATGCCGGCGCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPFGPPILLYGQ*LQLPARCRRPS Trigger: TGATGGGCGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CCA 72 bp | AGGATGTCTTCCGTTTGGTCCACCAATACTACTGTATaGCCAGTTGCTGCAGCTACCTGCGCGATGCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RMSSVWSTNTTV*PVAAATCAMPA Trigger: CGCCGGCATCGCGCAGGTAGCTGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAGACATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 72 bp | GTGTTGCTGGCAAAGATGGTGTGTTCTGCAGCGAACTaGTCCAGCCTCTGGAACAGCTCGTTCTTCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLLAKMVCSAAN*SSLWNSSFFSF Trigger: GAAGCTGAAGAACGAGCTGTTCCAGAGGCTGGACAAGTTCGCTGCAGAACACACCATCTTTGCCAGCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CCA 72 bp | AAGATGGTGTGTTCTGCAGCGAACTTGTCCAGCCTCTaGAACAGCTCGTTCTTCAGCTTCAGGTTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KMVCSAANLSSL*NSSFFSFRFST Trigger: TGTGGAGAACCTGAAGCTGAAGAACGAGCTGTTCCAGAGGCTGGACAAGTTCGCTGCAGAACACACCATCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CCA 72 bp | GCTTCTTCTGGGCCACCAGATTATTCATGGAAGGACTaGGCTGAAATAAGGGGTTCTCTGGCTCCATTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ASSGPPDYSWKD*AEIRGSLAPFH Trigger: ATGAAATGGAGCCAGAGAACCCCTTATTTCAGCCCAGTCCTTCCATGAATAATCTGGTGGCCCAGAAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CCA 72 bp | ATTCCCTTCTTGGATTTTGCCAGGATGTCTTCCGTTTaGTCCACCAATACTACTGTATGGCCAGTTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IPFLDFARMSSV*STNTTVWPVAA Trigger: TGCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAGACATCCTGGCAAAATCCAAGAAGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||
| CDS CAA 72 bp | AATTCCCTTCTTGGATTTTGCCAGGATGTCTTCCGTTaGGTCCACCAATACTACTGTATGGCCAGTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NSLLGFCQDVFR*VHQYYCMASCC Trigger: GCAGCAACTGGCCATACAGTAGTATTGGTGGACCAAACGGAAGACATCCTGGCAAAATCCAAGAAGGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029610.9 |
||