Pregenerated sensors for HACL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021884Ensembl transcript IDs: ENSMUST00000022437.16, ENSMUST00000127204.9, ENSMUST00000134626.8, ENSMUST00000140078.9, ENSMUST00000156431.8, ENSMUST00000165955.8, ENSMUST00000167066.8, ENSMUST00000171414.8
Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGATGATAAGCAGGGGTTGCTTGGCATCCCGAAGAACAGAGGCTaGTGCGCACACAGCAGAGGTTTCTGCCATGCTAACTGGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PDDKQGLLGIPKNRG*CAHSRGFCHANWRW Trigger: CCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR GCA 90 bp | GATGATAAGCAGGGGTTGCTTGGCATCCCGAAGAACAGAGGCTGCTaGGCACACAGCAGAGGTTTCTGCCATGCTAACTGGAGGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: DDKQGLLGIPKNRGC*AHSRGFCHANWRWH Trigger: ATGCCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR GCA 90 bp | AAATGGCAAACTGCACTGCTCCACCAGCTTCCTGATGCTGTCCTCTaGGTGGGAATAGGCAGCGCCTTTCCCGATGATAAGCAGGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: KWQTALLHQLPDAVL*VGIGSAFPDDKQGL Trigger: CAACCCCTGCTTATCATCGGGAAAGGCGCTGCCTATTCCCACGCAGAGGACAGCATCAGGAAGCTGGTGGAGCAGTGCAGTTTGCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | GGCTGCTGCGCACACAGCAGAGGTTTCTGCCATGCTAACTGGAGGTaGCATGCAGCACTCCTTGTATTTTATAGAAGTCACGTTCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GCCAHSRGFCHANWR*HAALLVFYRSHVRL Trigger: CAGGCGAACGTGACTTCTATAAAATACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| 3UTR GCA 90 bp | AGGAAGGCAGTTCTGAAGCATAGTCCGTCCGATGTCCATGGTGTTTaGCCCCTCACTCACTATGAAAGAGTCTCGGGGCAACTGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: RKAVLKHSPSDVHGV*PLTHYERVSGQLFL Trigger: CAAGAACAGTTGCCCCGAGACTCTTTCATAGTGAGTGAGGGGGCAAACACCATGGACATCGGACGGACTATGCTTCAGAACTGCCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | GCAGGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTaGTCAGAAGTCAGGGAGAAGACTATCTTCCAGGCAGCTAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: AGRHGAGEGVESSTS*SEVREKTIFQAARR Trigger: CCTCCTAGCTGCCTGGAAGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR TCA 90 bp | GGCAGTATGGCAGTGTGCAGGCAGACATGGTGCTGGAGAAGGAGTTaGGAGTTCTACATCTTGGTCAGAAGTCAGGGAGAAGACTATCTT | + |
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Preference number: 1 (lower is better) Translates to: GSMAVCRQTWCWRRS*EFYILVRSQGEDYL Trigger: AAGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCCTGCACACTGCCATACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR TCA 90 bp | TTAATTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATaGTGGCGGGCAGTATGGCAGTGTGCAGGCAGACATGGTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LIGAGLQFQRFSSLS*WRAVWQCAGRHGAG Trigger: TCCAGCACCATGTCTGCCTGCACACTGCCATACTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR GCA 90 bp | TGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTaGAGAGCCTGCCTCAGCGAGTGTTGGAGCTCTTCTGGTGTTCGT | + |
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Preference number: 1 (lower is better) Translates to: CGSIIMLRRQGLLVS*RACLSECWSSSGVR Trigger: ACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | TTCAACAGGTTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTaGGCCAAGCATATTCAAACCACTACAGTTAGCTTCTATGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: FNRFNRATPPNSATS*AKHIQTTTVSFYGS Trigger: AGAGCCATAGAAGCTAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAACCTGTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR CCA 90 bp | ACTTGTGTCTTGCAGAGCCTGCCTCAGCGAGTGTTGGAGCTCTTCTaGTGTTCGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGAC | + |
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Preference number: 1 (lower is better) Translates to: TCVLQSLPQRVLELF*CSYKIPFASKCSHD Trigger: GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | AGGCAGGGTTTACTTGTGTCTTGCAGAGCCTGCCTCAGCGAGTGTTaGAGCTCTTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: RQGLLVSCRACLSEC*SSSGVRTKYPLPPN Trigger: ATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | CCCTTTGCCTCCAAATGCAGTCATGACCTGCTCATAATGCGAGTTTaGCAAGAGGCACATTGGAGGGACAGTTGTAGCAGCTTCTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PFASKCSHDLLIMRV*QEAHWRDSCSSFLK Trigger: TTTCAAGAAGCTGCTACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | AGAACGGGTGAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTaGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: RTGEPVKILGLARTL*LNHNVEKAGFTCVL Trigger: CAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTCACCCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR TCA 90 bp | CTTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAATGCAGTCATaGCCTGCTCATAATGCGAGTTTGGCAAGAGGCACATTGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLVFVQNTLCLQMQS*PAHNASLARGTLEG Trigger: TCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CCA 90 bp | CCTCACTGCCTTTTCAATAATAAACGGAATGAGCTCTATGGTGCTTaGCCGGGCCGAGAACTTGGTATACAATCTGCAAGCTTCAACCTG | + |
|
Preference number: 1 (lower is better) Translates to: PHCLFNNKRNELYGA*PGRELGIQSASFNL Trigger: CAGGTTGAAGCTTGCAGATTGTATACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTCATTCCGTTTATTATTGAAAAGGCAGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
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| 3UTR GCA 90 bp | TTGGAGCTCTTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAATaGAGTCATGACCTGCTCATAATGCGAGTTTGGCAAGAGGCACAT | + |
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Preference number: 1 (lower is better) Translates to: LELFWCSYKIPFASK*SHDLLIMRVWQEAH Trigger: ATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR GCA 90 bp | CTTGTATTTTATAGAAGTCACGTTCGCCTGGAGGGTCACAAAATCTaGAGGAATGTCAATGTAACAAGCTCCCGGGCGACCATAGATACT | + |
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Preference number: 1 (lower is better) Translates to: LVFYRSHVRLEGHKI*RNVNVTSSRATIDT Trigger: AGTATCTATGGTCGCCCGGGAGCTTGTTACATTGACATTCCTGCAGATTTTGTGACCCTCCAGGCGAACGTGACTTCTATAAAATACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
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| 3UTR TCA 90 bp | ATTTTAAATTGTGTGTATATTTGCAACTGTGTGCAGGTGTACGCATaGGAATGTAGCCAAAGGAAGCTGAAGGCATTAAATCCCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: ILNCVYICNCVQVYA*ECSQRKLKALNPSP Trigger: GGGGGAGGGATTTAATGCCTTCAGCTTCCTTTGGCTACATTCTCATGCGTACACCTGCACACAGTTGCAAATATACACACAATTTAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCACCTTCCACACAGATGACCCGCTGCCCAGGACTTCTGTCTTTAGCCACCCACCACTGGCTGTCTaGGGGGCACTGCCACGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TVTFHTDDPLPRTSVFSHPPLAV*GALPRS Trigger: ACTCCGTGGCAGTGCCCCCCAGACAGCCAGTGGTGG...GTGGCTAAAGACAGAAGTCCTGGGCAGCGGGTCATCTGTGTGGAAGGTGACAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCGCACACAGCAGAGGTTTCTGCCATGCTAACTGGAGGTGGCATGCAGCACCACAGCAGAGGTTTCTaGCATGCTAACTGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: AAHTAEVSAMLTGGGMQHHSRGF*HANWRW Trigger: CCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTG...GTGCTGCATGCCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CAA 90 bp | GAAGTCAGGGAGAAGACTATCTTCCAGGCAGCTAGGAGGAGGGTCTaGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EVREKTIFQAARRRV*KPTPTLTHFLQQGH Trigger: GTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTCCTCCTAGCTGCCTGGAAGATAGTCTTCTCCCTGACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTTTAGCCACTAGAGCGGCTGCAATGGCAAATCCCAGGCCAACCCCCATTCCCCCTCACTCACTATaGAAGAGTCTCGGGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: LSLATRAAAMANPRPTPIPPHSL*KSLGAT Trigger: AGTTGCCCCGAGACTCTTTCATAGTGAGTGAGGGGG...AATGGGGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAGTGGCTAAAGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATCTGGCCGCGCCTACACAGTTGGGATGATTGTCAGGGACAACCCCCTTCCCATGCTAACTGGAGGTaGCATGCAGCACTCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: WIWPRLHSWDDCQGQPPSHANWR*HAALLV Trigger: TACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATG...GGAAGGGGGTTGTCCCTGACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCGGGCGACCATAGATACTGCTCCTCACTGCCTTTTCAATAATAAACGGGAGCTCTATGGTGCTTaGCCGGGCCGAGAACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SSRATIDTAPHCLFNNKRELYGA*PGRELG Trigger: ACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTC...CCGTTTATTATTGAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCCCGGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACCAGTTCCAGGGGATCTaGCACACTCACACTTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNQFQGI*HTHTCG Trigger: CCCGCAAGTGTGAGTGTGTCAGATCCCCTGGAACTG...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140078.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTCCTACACAGTTGGGATaGTTGTCAGGGACAACCCCC | + |
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Preference number: 2 (lower is better) Translates to: LGLARTLWLNHNVEKAGFPTQLG*LSGTTP Trigger: GGGGGTTGTCCCTGACAATCATCCCAACTGTGTAGG...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CAA 90 bp | GGGCAGTATGGCAGTGTGCAGGCAGACATGGTGCTGGAGAAGGAGTaGAGAGTTCTACATCTTGGTCAGAAGTCAGGGAGAAGACTATCT | + |
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Preference number: 2 (lower is better) Translates to: GQYGSVQADMVLEKE*RVLHLGQKSGRRLS Trigger: AGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCCTGCACACTGCCATACTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTGTCCATCATGACAGTTAAGAGCGTTGTCTaGTCTTTAAGAGAACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SVVDVPVHGHFALLSIMTVKSVV*SLREPG Trigger: CCCGGGTTCTCTTAAAGAGCAGACAACGCTCTTAAC...TGTCATGATGGACAAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCCCGAAGAACAGAGGCTaGTGCGCACACAGCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: CGSIIMLRRQGLLVSCRAPKNRG*CAHSRG Trigger: ACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGG...GGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATCTGCAGGAATGTCAATGTAACAAGCTCCCGGGCGACCATAGATACTGCTCCGAAGAACAGAGGCTaGTGCGCACACAGCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: KICRNVNVTSSRATIDTAPKNRG*CAHSRG Trigger: ACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGG...AGCAGTATCTATGGTCGCCCGGGAGCTTGTTACATTGACATTCCTGCAGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGCCAACCCCCATTGTTCCAAAAGAACCTGCATCAAGCCTGTGGCGAGGATGGAGATGGCTTCATTaGTCTTCATTTTCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PRPTPIVPKEPASSLWRGWRWLH*SSFSPS Trigger: TGAGGGAGAAAATGAAGAGCAATGAAGCCATCTCCA...TCCTCGCCACAGGCTTGATGCAGGTTCTTTTGGAACAATGGGGGTTGGCCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTTGTGTCTTGCAGAGCCTGCCTCAGCGAGTGTTGGAGCTCTTCTGGTGTACACAGATGACCCGCTaGCCAGGACTTCTGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: FTCVLQSLPQRVLELFWCTQMTR*PGLLSL Trigger: TAAAGACAGAAGTCCTGGGCAGCGGGTCATCTGTGT...ACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTATATTTGCAACTGTGTGCAGGTGTACGCATGAGAATGTAGCCAAAGGAGGAGTGGCATCACGCTaGGAGCTAGTCCCCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: VCIFATVCRCTHENVAKGGVASR*ELVPSD Trigger: GTCACTGGGGACTAGCTCCCAGCGTGATGCCACTCC...TCCTTTGGCTACATTCTCATGCGTACACCTGCACACAGTTGCAAATATACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGCATGCAGCACTCCTTGTATTTTATAGAAGTCACGTTCGCCTGGAGGGTGCAAGCTTCAACCTGTaGAAACTCCTGGAAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RWHAALLVFYRSHVRLEGASFNL*KLLEGS Trigger: GGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTGC...ACCCTCCAGGCGAACGTGACTTCTATAAAATACAAGGAGTGCTGCATGCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTCTACATCTTGGTCAGAAGTCAGGGAGAAGACTATCTTCCAGGCAGCTATTAGGTCGGGCGTGGTaGCGCACGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: RVLHLGQKSGRRLSSRQLLGRAW*RTPLIP Trigger: TGGGATTAAAGGCGTGCGCCACCACGCCCGACCTAA...TAGCTGCCTGGAAGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTTTCTGCCATGCTAACTaGAGGTGGCATGCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: LGLARTLWLNHNVEKAGFFCHAN*RWHAAL Trigger: GAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAA...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGTCCGTCCGATGTCCATaGTGTTTGCCCCCTCACTCA | + |
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Preference number: 2 (lower is better) Translates to: PVKILGLARTLWLNHNVESVRCP*CLPPHS Trigger: TGAGTGAGGGGGCAAACACCATGGACATCGGACGGA...CTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCCTAGAGCGGCTGCAATaGCAAATCCCAGGCCAACCC | + |
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Preference number: 2 (lower is better) Translates to: ARTLWLNHNVEKAGFTCVLERLQ*QIPGQP Trigger: GGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAG...GACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CAA 90 bp | AAGGCAGGGTTTACTTGTGTCTTGCAGAGCCTGCCTCAGCGAGTGTaGGAGCTCTTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: KAGFTCVLQSLPQRV*ELFWCSYKIPFASK Trigger: TTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CAA 90 bp | TTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTaGCAGAGCCTGCCTCAGCGAGTGTTGGAGCTCTTCTGGTGTTCG | + |
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Preference number: 2 (lower is better) Translates to: LWLNHNVEKAGFTCV*QSLPQRVLELFWCS Trigger: CGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCTACATCTTGGTCAGAAGTCAGGGAGAAGACTATCTTCCAGGCAGCTAAGCCCACCCCCACATTaGCACACTTCCTCCAACAAG | + |
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Preference number: 2 (lower is better) Translates to: RVLHLGQKSGRRLSSRQLSPPPH*HTSSNK Trigger: CTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCT...TAGCTGCCTGGAAGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTGCAAAAATGGCAAACTaGACTGCTCCACCAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LGLARTLWLNHNVEKAGFAKMAN*TAPPAS Trigger: GGAAGCTGGTGGAGCAGTGCAGTTTGCCATTTTTGC...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATAACTATTTTGGCTCATaGATTCAGAGGTTCCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHNYFGS*IQRFQP Trigger: GGGTTGGAACCTCTGAATCCATGAGCCAAAATAGTT...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAGGAGGTGCACTTAAATaGGGGAACTATTTTGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FNRATPPNSATSWAKHIQGGALK*GNYFGS Trigger: TGAGCCAAAATAGTTCCCCCATTTAAGTGCACCTCC...TTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGTCAACAGTGCCACCTCCTaGGCCAAGCATATTCAAACC | + |
|
Preference number: 2 (lower is better) Translates to: GRHGAGEGVESSTSWSEVNSATS*AKHIQT Trigger: GGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTT...GACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGACCTGCTCATAATGCGAGTTTGGCAAGAGGCACATTGGAGGGACAGTTGTAGTTGTACCTGCAGATaGTCTCCACTTCCATGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: HDLLIMRVWQEAHWRDSCSCTCR*SPLPCQ Trigger: CTGGCATGGAAGTGGAGACCATCTGCAGGTACAACT...ACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CAA 90 bp | GTTAGAACGGGTGAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTaGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VRTGEPVKILGLART*WLNHNVEKAGFTCV Trigger: GACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTCACCCGTTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTCCCTGGAGTTGCAATTACAGGCAGTTGTGAATCACTCACTGTTGCTAAGAGTGCCAGGAGCTTCTaGCCAAGCCTTTACCACATA | + |
|
Preference number: 2 (lower is better) Translates to: PVPGVAITGSCESLTVAKSARSF*PSLYHI Trigger: TATGTGGTAAAGGCTTGGTCAGAAGCTCCTGGCACT...CTTAGCAACAGTGAGTGATTCACAACTGCCTGTAATTGCAACTCCAGGGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTTCTACATCTTGGTCAGAAGTCAGGGAGAAGACTATCTTCCAGGCAGCTATCATGGCAGTTAGTGTaGAAGGCAGCTCACCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RVLHLGQKSGRRLSSRQLSWQLV*KAAHLW Trigger: CCACAGGTGAGCTGCCTTGCACACTAACTGCCATGA...TAGCTGCCTGGAAGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR-3UTR GCA 90 bp | TCACAAAATCTGCAGGAATGTCAATGTAACAAGCTCCCGGGCGACCATAGATACCACAGCAGAGGTTTCTaGCATGCTAACTGGAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SQNLQECQCNKLPGDHRYHSRGF*HANWRW Trigger: CCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTG...GTATCTATGGTCGCCCGGGAGCTTGTTACATTGACATTCCTGCAGATTTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGCAGTCAAGGGACATCTaGGTTGTTTTCAGCTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQQSRDI*VVFSFW Trigger: CCAGAAGCTGAAAACAACCCAGATGTCCCTTGACTG...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR CAA 90 bp | ATAATAAACGGAATGAGCTCTATGGTGCTTGGCCGGGCCGAGAACTaGGTATACAATCTGCAAGCTTCAACCTGTGGAAACTCCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IINGMSSMVLGRAEN*VYNLQASTCGNSWK Trigger: CTTCCAGGAGTTTCCACAGGTTGAAGCTTGCAGATTGTATACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTCATTCCGTTTATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCACACAGATGACCCGCTaGCCAGGACTTCTGTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CGSIIMLRRQGLLVSCRATQMTR*PGLLSL Trigger: TAAAGACAGAAGTCCTGGGCAGCGGGTCATCTGTGT...GGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR TCA 90 bp | CATGACCTGCTCATAATGCGAGTTTGGCAAGAGGCACATTGGAGGGACAGTTGTAAATCACAGAAGGCCTaGCATTATTCCCCAGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HDLLIMRVWQEAHWRDSCKSQKA*HYSPVL Trigger: AAGAACTGGGGAATAATGTCAGGCCTTCTGTGATTT...ACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCGGCGACCATAGATACTaGTCCTCACTGCCTTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: CGSIIMLRRQGLLVSCRAGDHRY*SSLPFQ Trigger: TTGAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCC...GGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGTTCCACACTTCCAGATaGAAGTCCAGAGTAAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQFHTSR*KSRVSI Trigger: AATGCTTACTCTGGACTTGCATCTGGAAGTGTGGAA...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCGGGGCAACTGTTCTTGAACGTGGTAGAACACTGTGTAATAATTCATAGGCATGCTAACTGGAGGTaGCATGCAGCACTCCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: VSGQLFLNVVEHCVIIHRHANWR*HAALLV Trigger: TACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATG...CCTATGAATTATTACACAGTGTTCTACCACGTTCAAGAACAGTTGCCCCGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGATTCTGCCATGCTAACTaGAGGTGGCATGCAGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: LCGSIIMLRRQGLLVSCRFCHAN*RWHAAL Trigger: GAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAA...TCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCCCAGTTCTTCTGCACAGATATCAATCTGAATAAACTTCACGTCTGCCTGCCGCGCCTACACAGTTaGGATGATTGTCAGGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: IPQFFCTDINLNKLHVCLPRLHS*DDCQGQ Trigger: TTGTCCCTGACAATCATCCCAACTGTGTAGGCGCGG...CAGGCAGACGTGAAGTTTATTCAGATTGATATCTGTGCAGAAGAACTGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCTGCCTCAGCGAGCCAGTTCCTTGGAGATaGCTTCATTGCTCTTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: IMLRRQGLLVSCRACLSEPVPWR*LHCSSF Trigger: AAATGAAGAGCAATGAAGCCATCTCCAAGGAACTGG...CTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCTCTTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACAATAAACTTCACGTCTaGCTGGTATCTTGGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ELFWCSYKIPFASKCSHDNKLHV*LVSWRQ Trigger: CTGCCTCCAAGATACCAGGCAGACGTGAAGTTTATT...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGATGGTCTCCACTTCCATaGCAGAAAATCCGAAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LCGSIIMLRRQGLLVSCRWSPLP*QKIRRH Trigger: GTGCCTTCGGATTTTCTGGCATGGAAGTGGAGACCA...TCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATATTCCCCAGTTCTTCTaGACAGATATCAATCTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GEPVKILGLARTLWLNHNIPQFF*TDINLD Trigger: ATCCAGATTGATATCTGTGCAGAAGAACTGGGGAAT...ATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAAGGCGTAGGCAAAAATaGCAAACTGCACTGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LCGSIIMLRRQGLLVSCRRRRQK*QTALLH Trigger: GTGGAGCAGTGCAGTTTGCCATTTTTGCCTACGCCT...TCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGTCAGCGTCAAAACCTTGGTAAATTCCATTATTGTTTACTACCAAGAGTACTAGAGCGGCTGCAATaGCAAATCCCAGGCCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: RCQRQNLGKFHYCLLPRVLERLQ*QIPGQP Trigger: GGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAG...TACTCTTGGTAGTAAACAATAATGGAATTTACCAAGGTTTTGACGCTGACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CAA 90 bp | CAGTCCCTGGAGTTGCAATTACAGGCAGTTGTGAATCACTCACTGTaGCTAAGAACCAAACTCACATCTTCTGCAAGAGTAGTTTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QSLELQLQAVVNHSL*LRTKLTSSARVVCA Trigger: AGCACAAACTACTCTTGCAGAAGATGTGAGTTTGGTTCTTAGCAACAGTGAGTGATTCACAACTGCCTGTAATTGCAACTCCAGGGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR-3UTR TCA 90 bp | GTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCCTCCAAATGCAGTCATaGCCTGCTCATAATGCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLCGSIIMLRRQGLLVSCLQMQS*PAHNAS Trigger: ACTCGCATTATGAGCAGGTCATGACTGCATTTGGAG...GCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGTTTGGCAAGAGGCACATTGGAGGGACAGTTGTAGCAGCTTCTTGAAAATGGAGGGTCACAAAATCTaGAGGAATGTCAATGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: RVWQEAHWRDSCSSFLKMEGHKI*RNVNVT Trigger: TGTTACATTGACATTCCTGCAGATTTTGTGACCCTC...CATTTTCAAGAAGCTGCTACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTCTTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAATGCAGTCATGACCCAGTTCCTTGGAGATaGCTTCATTGCTCTTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: ELFWCSYKIPFASKCSHDPVPWR*LHCSSF Trigger: AAATGAAGAGCAATGAAGCCATCTCCAAGGAACTGG...GTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGGTTGTTTTCAGCTTCTaGCTATTACTAATAAAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQVVFSF*LLLIKL Trigger: CAGCTTTATTAGTAATAGCCAGAAGCTGAAAACAAC...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCGGGGCAACTGTTCTTGAACGTGGTAGAACACTGTGTAATAATTCATAGGGATACTGCTCCTCACTaGCTTTTCAATAATAAACGG | + |
|
Preference number: 2 (lower is better) Translates to: VSGQLFLNVVEHCVIIHRDTAPH*LFNNKR Trigger: CCGTTTATTATTGAAAAGGCAGTGAGGAGCAGTATC...CCTATGAATTATTACACAGTGTTCTACCACGTTCAAGAACAGTTGCCCCGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCTGCCTCATTCCCCAGTTCTTCTaGACAGATATCAATCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SIIMLRRQGLLVSCRACLIPQFF*TDINLN Trigger: ATTCAGATTGATATCTGTGCAGAAGAACTGGGGAAT...GAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR TCA 72 bp | CATGAAAGGGCTTGCTCAGCCCAGGGGATGTGGGCTTaGGGAGTGGCATCACGCTGGGAGCTAGTCCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HERACSAQGMWA*GVASRWELVPS Trigger: ACTGGGGACTAGCTCCCAGCGTGATGCCACTCCTCAAGCCCACATCCCCTGGGCTGAGCAAGCCCTTTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR TCA 72 bp | TTGAGGAGTGGCATCACGCTGGGAGCTAGTCCCCAGTaGCCTCACTCCACCGTCCAAAGTGCCAGGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRSGITLGASPQ*PHSTVQSARSF Trigger: GAAGCTCCTGGCACTTTGGACGGTGGAGTGAGGTCACTGGGGACTAGCTCCCAGCGTGATGCCACTCCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR GCA 72 bp | CAGGGGTTGCTTGGCATCCCGAAGAACAGAGGCTGCTaGGCACACAGCAGAGGTTTCTGCCATGCTAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGLLGIPKNRGC*AHSRGFCHANW Trigger: CCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGGGATGCCAAGCAACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | AACTGTGGAGTCGTCTCTGCAGCCCTCGCTCAGTGGTaGACGTGCCAGTCCATGGTCACTTCGCCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NCGVVSAALAQW*TCQSMVTSPFC Trigger: ACAAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAGAGACGACTCCACAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR CCA 72 bp | CTTAACTGTGGAGTCGTCTCTGCAGCCCTCGCTCAGTaGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNCGVVSAALAQ*WTCQSMVTSPF Trigger: AAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAGAGACGACTCCACAGTTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR TCA 72 bp | TGCCAGTCCATGGTCACTTCGCCCTTTTGTCCATCATaGCAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQSMVTSPFCPS*QGLMKGLAQPR Trigger: CCTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAAGTGACCATGGACTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR GCA 72 bp | AAGCAGGGGTTGCTTGGCATCCCGAAGAACAGAGGCTaGTGCGCACACAGCAGAGGTTTCTGCCATGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQGLLGIPKNRG*CAHSRGFCHAN Trigger: GTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGGGATGCCAAGCAACCCCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | ACACAATCACGTCAGCGGACTGCAAAGCCCTGGATCTaGCCGCGCCTACACAGTTGGGATGATTGTCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TQSRQRTAKPWI*PRLHSWDDCQG Trigger: TCCCTGACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCAGGGCTTTGCAGTCCGCTGACGTGATTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCAAAGCCCTGGATCTGGCCGCGCCTACACAGTTGGGATGATTGTCAGGGAGATGATAAGCAGGGGTaGCTTGGCATCCCGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TAKPWIWPRLHSWDDCQGDDKQG*LGIPKN Trigger: GTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATC...TCCCTGACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCAGGGCTTTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR GCA 72 bp | AGTCTCGCACCAAATAACACAATCACGTCAGCGGACTaGAAAGCCCTGGATCTGGCCGCGCCTACACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SLAPNNTITSAD*KALDLAAPTQL Trigger: CAACTGTGTAGGCGCGGCCAGATCCAGGGCTTTGCAGTCCGCTGACGTGATTGTGTTATTTGGTGCGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCACCTTCCACACAGATGACCCGCTGCCCAGGACTTCTGTCTTTAGCCACCATAGGGAGGGACTTTaGGGAAGCCAGTTCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVTFHTDDPLPRTSVFSHHREGL*GSQFLG Trigger: TCCAAGGAACTGGCTTCCCAAAAGTCCCTCCCTATG...GTGGCTAAAGACAGAAGTCCTGGGCAGCGGGTCATCTGTGTGGAAGGTGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | TGGTGCTTGGCCGGGCCGAGAACTTGGTATACAATCTaGAAGCTTCAACCTGTGGAAACTCCTGGAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WCLAGPRTWYTI*KLQPVETPGRL Trigger: GAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTGCAGATTGTATACCAAGTTCTCGGCCCGGCCAAGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| 3UTR TCA 72 bp | GTCCGATGTCCATGGTGTTTGCCCCCTCACTCACTATaGAAGAGTCTCGGGGCAACTGTTCTTGAACGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VRCPWCLPPHSL*KSLGATVLERG Trigger: ACCACGTTCAAGAACAGTTGCCCCGAGACTCTTTCATAGTGAGTGAGGGGGCAAACACCATGGACATCGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | GTTCTGAAGCATAGTCCGTCCGATGTCCATGGTGTTTaGCCCCTCACTCACTATGAAAGAGTCTCGGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VLKHSPSDVHGV*PLTHYERVSGQ Trigger: TTGCCCCGAGACTCTTTCATAGTGAGTGAGGGGGCAAACACCATGGACATCGGACGGACTATGCTTCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | AAATCCCAGGCCAACCCCCATTGTTCCAAAAGAACCTaGATCAAGCCTGTGGCGAGGAAGGCAGTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSQANPHCSKRT*IKPVARKAVLK Trigger: CTTCAGAACTGCCTTCCTCGCCACAGGCTTGATGCAGGTTCTTTTGGAACAATGGGGGTTGGCCTGGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | TTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCTaGCTCAGCGAGTGTTGGAGCTCTTCTGGTGTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LRRQGLLVSCRA*LSECWSSSGVR Trigger: ACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | CAAATAACACAATCACGTCAGCGGACTGCAAAGCCCTaGATCTGGCCGCGCCTACACAGTTGGGATGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: QITQSRQRTAKP*IWPRLHSWDDC Trigger: ACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCAGGGCTTTGCAGTCCGCTGACGTGATTGTGTTATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGAAGGCAGGGTTTACTaGTGTCTTGCAGAGCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GEPVKILGLARTLWLNHNEGRVY*CLAEPA Trigger: GGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTC...ATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | TTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTaGGCCAAGCATATTCAAACCACTACAGTTAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FNRATPPNSATS*AKHIQTTTVSF Trigger: GAAGCTAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR CCA 72 bp | TTGCAGAGCCTGCCTCAGCGAGTGTTGGAGCTCTTCTaGTGTTCGTACAAAATACCCTTTGCCTCCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LQSLPQRVLELF*CSYKIPFASKC Trigger: GCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | TTCCCCAGTTCTTCTGCACAGATATCAATCTGGATCTaGCCGCGCCTACACAGTTGGGATGATTGTCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPSSSAQISIWI*PRLHSWDDCQG Trigger: TCCCTGACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCAGATTGATATCTGTGCAGAAGAACTGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCCTCCAAATGCAGTCATGACCTGCTCATAATGCGAGTTTGGCAAGAGGCATGGGAAGCCAGTTCCTaGGAGATGGCTTCATTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FASKCSHDLLIMRVWQEAWEASS*EMASLL Trigger: GAGCAATGAAGCCATCTCCAAGGAACTGGCTTCCCA...TGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATGACTGCATTTGGAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR TCA 72 bp | GCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATaGTGGCGGGCAGTATGGCAGTGTGCAGGCAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: AGLQFQRFSSLS*WRAVWQCAGRH Trigger: ATGTCTGCCTGCACACTGCCATACTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR CCA 72 bp | CTGCTCTTTAAGAGAACCCGGGTTCAATTTCCTGCATaGCAGCTCACCACTGTCTGTAACTTCAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFKRTRVQFPA*QLTTVCNFSSR Trigger: CCTGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAAGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| 3UTR CCA 72 bp | TCCAAATGCAGTCATGACCTGCTCATAATGCGAGTTTaGCAAGAGGCACATTGGAGGGACAGTTGTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SKCSHDLLIMRV*QEAHWRDSCSS Trigger: GCTGCTACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATGACTGCATTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | TGCTGCGCACACAGCAGAGGTTTCTGCCATGCTAACTaGAGGTGGCATGCAGCACTCCTTGTATTTTATAGA | + |
|
Preference number: 3 (lower is better) Translates to: CCAHSRGFCHAN*RWHAALLVFYR Trigger: TCTATAAAATACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCCTGACACACTCACACTaGCGGGAAAGAGAAAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFLTHSH*RERENS Trigger: GGAATTTTCTCTTTCCCGCAAGTGTGAGTGTGTCAG...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140078.9 |
||
| 3UTR-3UTR CAA 90 bp | CATGACCTGCTCATAATGCGAGTTTGGCAAGAGGCACATTGGAGGGACAGTTGTAGTATGATTGGCAAGTaGTACCTGCAGATGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HDLLIMRVWQEAHWRDSCSMIGK*YLQMVS Trigger: GGAGACCATCTGCAGGTACAACTTGCCAATCATACT...ACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | AATCACAGAAGGCCTGACATTATTCCCCAGTTCTTCTaGACAGATATCAATCTGGATCTGGCCGCGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: NHRRPDIIPQFF*TDINLDLAAPT Trigger: TGTAGGCGCGGCCAGATCCAGATTGATATCTGTGCAGAAGAACTGGGGAATAATGTCAGGCCTTCTGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | AAGTGTCCTTGTGGGATGGAGGGAGGTGCACTTAAATaGGGGAACTATTTTGGCTCATGGATTCAGAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KCPCGMEGGALK*GNYFGSWIQRF Trigger: GAACCTCTGAATCCATGAGCCAAAATAGTTCCCCCATTTAAGTGCACCTCCCTCCATCCCACAAGGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR CCA 72 bp | CATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTaGTCAGAAGTCAGGGAGAAGACTATCTTCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HGAGEGVESSTS*SEVREKTIFQA Trigger: TGCCTGGAAGATAGTCTTCTCCCTGACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR CCA 72 bp | GCACACAGCAGAGGTTTCTGCCATGCTAACTGGAGGTaGCATGCAGCACTCCTTGTATTTTATAGAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AHSRGFCHANWR*HAALLVFYRSH Trigger: GTGACTTCTATAAAATACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTCGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LGLARTLWLNHNVEKAGFRTKYP*PPNAVM Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACG...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTATAGAAGTCACGTTCGCCTGGAGGGTCACAAAATCTGCAGGAATGTCAATGATGATAAGCAGGGGTaGCTTGGCATCCCGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FYRSHVRLEGHKICRNVNDDKQG*LGIPKN Trigger: GTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATC...ATTGACATTCCTGCAGATTTTGTGACCCTCCAGGCGAACGTGACTTCTATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | ACAAGCTCCCGGGCGACCATAGATACTGCTCCTCACTaGCTTTTCAATAATAAACGGAATGAGCTCTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TSSRATIDTAPH*LFNNKRNELYG Trigger: ACCATAGAGCTCATTCCGTTTATTATTGAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCCCGGGAGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| 3UTR CCA 72 bp | ACATTATTCCCCAGTTCTTCTGCACAGATATCAATCTaGATCTGGCCGCGCCTACACAGTTGGGATGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLFPSSSAQISI*IWPRLHSWDDC Trigger: ACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCAGATTGATATCTGTGCAGAAGAACTGGGGAATAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR GCA 72 bp | CAAAATCATGGGGGCTTAGTGGTTAAGAGCGTTGTCTaGTCTTTAAGAGAACCCGGGTTCAATTTCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QNHGGLVVKSVV*SLREPGFNFLH Trigger: ATGCAGGAAATTGAACCCGGGTTCTCTTAAAGAGCAGACAACGCTCTTAACCACTAAGCCCCCATGATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| 3UTR CCA 72 bp | CTTTTCAATAATAAACGGAATGAGCTCTATGGTGCTTaGCCGGGCCGAGAACTTGGTATACAATCTGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LFNNKRNELYGA*PGRELGIQSAS Trigger: GCTTGCAGATTGTATACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTCATTCCGTTTATTATTGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| 3UTR TCA 72 bp | TGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATaGTCTTTTCTAGTTCCATCCATTTGGCAAATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLSSRVRVPHSG*SFLVPSIWQIS Trigger: TGAAATTTGCCAAATGGATGGAACTAGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR GCA 72 bp | CTCATAAAATTAAACAGCAAGTTCCACACTTCCAGATaGAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LIKLNSKFHTSR*KSRVSIPTLAG Trigger: TCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCTGGAAGTGTGGAACTTGCTGTTTAATTTTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR GCA 72 bp | TTCTGGTGTTCGTACAAAATACCCTTTGCCTCCAAATaGAGTCATGACCTGCTCATAATGCGAGTTTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FWCSYKIPFASK*SHDLLIMRVWQ Trigger: TTGCCAAACTCGCATTATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGGTATTTTGTACGAACACCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCGGCATGCAGCACTCCTaGTATTTTATAGAAGTCACG | + |
|
Preference number: 3 (lower is better) Translates to: VLCGSIIMLRRQGLLVSCGMQHS*YFIEVT Trigger: CGTGACTTCTATAAAATACAAGGAGTGCTGCATGCC...GCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGTCAGCGTCAAAACCTaGGTAAATTCCATTATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EPVKILGLARTLWLNHNVVSVKT*VNSIIV Trigger: AACAATAATGGAATTTACCAAGGTTTTGACGCTGAC...AACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATAAAGTAAATTCTACCTaGCGGGAAAGAGAAAATTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHKVNST*RERENS Trigger: GGAATTTTCTCTTTCCCGCAAGGTAGAATTTACTTT...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR TCA 72 bp | CAGCATCTATATCTCCTAGCAAAATCACAGAAGGCCTaGCATTATTCCCCAGTTCTTCTGCACAGATATCAA | + |
|
Preference number: 3 (lower is better) Translates to: QHLYLLAKSQKA*HYSPVLLHRYQ Trigger: TTGATATCTGTGCAGAAGAACTGGGGAATAATGTCAGGCCTTCTGTGATTTTGCTAGGAGATATAGATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR TCA 72 bp | CTTGGTAAATTCCATTATTGTTTACTACCAAGAGTATaGTTGGCAAGTTGTACCTGCAGATGGTCTCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LGKFHYCLLPRV*LASCTCRWSPL Trigger: AAGTGGAGACCATCTGCAGGTACAACTTGCCAATCATACTCTTGGTAGTAAACAATAATGGAATTTACCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CCA 72 bp | ACATTTTCTTTATCCATTCTTCAGTCAAGGGACATCTaGGTTGTTTTCAGCTTCTGGCTATTACTAATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TFSLSILQSRDI*VVFSFWLLLIK Trigger: CTTTATTAGTAATAGCCAGAAGCTGAAAACAACCCAGATGTCCCTTGACTGAAGAATGGATAAAGAAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCCAACCCCCATTGTTCCAAAAGAACCTGCATCAAGCCTGTGGCGAGGAATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRPTPIVPKEPASSLWRGMPPKA*MRPGPE Trigger: TTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCAT...TCCTCGCCACAGGCTTGATGCAGGTTCTTTTGGAACAATGGGGGTTGGCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| 3UTR CAA 72 bp | GGAATAGGCAGCGCCTTTCCCGATGATAAGCAGGGGTaGCTTGGCATCCCGAAGAACAGAGGCTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIGSAFPDDKQG*LGIPKNRGCCA Trigger: TGCGCAGCAGCCTCTGTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATCGGGAAAGGCGCTGCCTATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR TCA 90 bp | TTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAGAACGGGTGAGCCAGTaGAAATCCTGGGCCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FNRATPPNSATSWAKHIQERVSQ*KSWALR Trigger: GCGCAAGGCCCAGGATTTTCACTGGCTCACCCGTTC...TTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCGCACACAGCAGAGGTTTCTGCCATGCTAACTGGAGGTGGCATGCAGCACGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAHTAEVSAMLTGGGMQHVHVCI*HAAQGV Trigger: CACGCCTTGGGCGGCATGGCAAATGCAAACATGAAC...GTGCTGCATGCCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTGTGCGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTACACAGATGACCCGCTaGCCAGGACTTCTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQPSLSGGRASPWSLRPFTQMTR*PGLLSL Trigger: TAAAGACAGAAGTCCTGGGCAGCGGGTCATCTGTGT...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AAGACTATCTTCCAGGCAGCTAGGAGGAGGGTCTTGAAGCCCACCCCCACATTGGTGTCTTGCAGAGCCTaGCTCAGCGAGTGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTIFQAARRRVLKPTPTLVSCRA*LSECWS Trigger: GCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACAC...CAATGTGGGGGTGGGCTTCAAGACCCTCCTCCTAGCTGCCTGGAAGATAGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGTCCCACCACTGGCTGTCTaGGGGGCACTGCCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRHGAGEGVESSTSWSEVPPLAV*GALPRS Trigger: ACTCCGTGGCAGTGCCCCCCAGACAGCCAGTGGTGG...GACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGCTAGAGCGGCTGCAATaGCAAATCCCAGGCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: FALLSIMTGAHERACSAQLERLQ*QIPGQP Trigger: GGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAG...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATCTAGAGCGGCTGCAATaGCAAATCCCAGGCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHLERLQ*QIPGQP Trigger: GGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAG...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| 3UTR CAA 72 bp | GTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTaGTCCATCATGACAGGGGCTCATGAAAGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVDVPVHGHFAL*SIMTGAHERAC Trigger: GCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR CAA 72 bp | GAGCGGCTGCAATGGCAAATCCCAGGCCAACCCCCATaGTTCCAAAAGAACCTGCATCAAGCCTGTGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERLQWQIPGQPP*FQKNLHQACGE Trigger: CTCGCCACAGGCTTGATGCAGGTTCTTTTGGAACAATGGGGGTTGGCCTGGGATTTGCCATTGCAGCCGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | TGCGTGGGAATAGGCAGCGCCTTTCCCGATGATAAGCAGGGGTTGCTTGGCATCTTAGCACCAGACACCTaGTCCTCGCTTCTGTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CVGIGSAFPDDKQGLLGILAPDT*SSLLSL Trigger: TAGCGACAGAAGCGAGGAGCAGGTGTCTGGTGCTAA...GATGCCAAGCAACCCCTGCTTATCATCGGGAAAGGCGCTGCCTATTCCCACGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGTTCCAACCCAGGATGAGCTAAGAATCATGGCAGTTAGGTCGGGCGTGGGCACACTCCTGGCCTaGCTGTCAGGTATCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVPTQDELRIMAVRSGVGTLLA*LSGIQL Trigger: CAGTTGGATACCTGACAGGCAGGCCAGGAGTGTGCC...CACGCCCGACCTAACTGCCATGATTCTTAGCTCATCCTGGGTTGGAACCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTGTCCATCATGACAGAGCTCTATGGTGCTTaGCCGGGCCGAGAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVVDVPVHGHFALLSIMTELYGA*PGRELG Trigger: ACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTC...TGTCATGATGGACAAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACCCACCACTGGCTGTCTaGGGGGCACTGCCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNPPLAV*GALPRS Trigger: ACTCCGTGGCAGTGCCCCCCAGACAGCCAGTGGTGG...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | TGGATCTGGCCGCGCCTACACAGTTGGGATGATTGTCAGGGACAACCCCCTTCCATGTACTCCACATCTTaGGTTTTTAGAGCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WIWPRLHSWDDCQGQPPSMYSTS*VFRAWA Trigger: CGCCCAGGCTCTAAAAACTCAAGATGTGGAGTACAT...GGAAGGGGGTTGTCCCTGACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCCACCTTCCACACAGATaGCCCGCTGCCCAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFHLPHR*PAAQDF Trigger: GAAGTCCTGGGCAGCGGGTCATCTGTGTGGAAGGTG...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTACACCTTCCACACAGATaGCCCGCTGCCCAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLHLPHR*PAAQDF Trigger: GAAGTCCTGGGCAGCGGGTCATCTGTGTGGAAGGTG...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCGAACGGGTGAGCCAGTaGAAATCCTGGGCCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFERVSQ*KSWALR Trigger: GCGCAAGGCCCAGGATTTTCACTGGCTCACCCGTTC...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR GCA 90 bp | ACTGCAAAGCCCTGGATCTGGCCGCGCCTACACAGTTGGGATGATTGTCAGGGATCTGTCGCTACCCTCTaGGGAGTTACTTTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TAKPWIWPRLHSWDDCQGSVATL*GVTFWH Trigger: ATGCCAGAAAGTAACTCCGCAGAGGGTAGCGACAGA...TCCCTGACAATCATCCCAACTGTGTAGGCGCGGCCAGATCCAGGGCTTTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTAGCCACTAGAGCGGCTGCAATGGCAAATCCCAGGCCAACCCCCATTTTAGCACCAGACACCTaGTCCTCGCTTCTGTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLATRAAAMANPRPTPILAPDT*SSLLSL Trigger: TAGCGACAGAAGCGAGGAGCAGGTGTCTGGTGCTAA...AATGGGGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAGTGGCTAAAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTAGCCACTAGAGCGGCTGCAATGGCAAATCCCAGGCCAACCCCCATTGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLATRAAAMANPRPTPIVHVCI*HAAQGV Trigger: CACGCCTTGGGCGGCATGGCAAATGCAAACATGAAC...AATGGGGGTTGGCCTGGGATTTGCCATTGCAGCCGCTCTAGTGGCTAAAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTAATAAACTTCACGTCTaGCTGGTATCTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQPSLSGGRASPWSLRPFNKLHV*LVSWRQ Trigger: CTGCCTCCAAGATACCAGGCAGACGTGAAGTTTATT...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSMPPKA*MRPGPE Trigger: TTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCAT...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLARTLWLNHNVEKAGFMPPKA*MRPGPE Trigger: TTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCAT...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CCA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGTGCCTCAGCGAGTGTTaGAGCTCTTCTGGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FALLSIMTGAHERACSAQCLSEC*SSSGVR Trigger: ACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCA...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR CAA 72 bp | GAGAAGACTATCTTCCAGGCAGCTAGGAGGAGGGTCTaGAAGCCCACCCCCACATTGACACACTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EKTIFQAARRRV*KPTPTLTHFLQ Trigger: TTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTCCTCCTAGCTGCCTGGAAGATAGTCTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTAAATCACAGAAGGCCTaGCATTATTCCCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQPSLSGGRASPWSLRPFKSQKA*HYSPVL Trigger: AAGAACTGGGGAATAATGTCAGGCCTTCTGTGATTT...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | CGGAATGAGCTCTATGGTGCTTGGCCGGGCCGAGAACTTGGTATACAATCTGCATTAGCACCAGACACCTaGTCCTCGCTTCTGTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RNELYGAWPGRELGIQSALAPDT*SSLLSL Trigger: TAGCGACAGAAGCGAGGAGCAGGTGTCTGGTGCTAA...TGCAGATTGTATACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTCATTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTGGCACACTCCTGGCCTaGCTGTCAGGTATCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLARTLWLNHNVEKAGFGTLLA*LSGIQL Trigger: CAGTTGGATACCTGACAGGCAGGCCAGGAGTGTGCC...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCACCGAAGAACAGAGGCTaGTGCGCACACAGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSPKNRG*CAHSRG Trigger: ACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGG...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTACCGAAGAACAGAGGCTaGTGCGCACACAGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLPKNRG*CAHSRG Trigger: ACCTCTGCTGTGTGCGCAGCAGCCTCTGTTCTTCGG...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGGCAAAAATGGCAAACTaGACTGCTCCACCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FALLSIMTGAHERACSAQAKMAN*TAPPAS Trigger: GGAAGCTGGTGGAGCAGTGCAGTTTGCCATTTTTGC...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTGTCTTGCAGAGCCTaGCTCAGCGAGTGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSVSCRA*LSECWS Trigger: GCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACAC...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR GCA 90 bp | TTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAGGTTTACTTGTGTCTTaGAGAGCCTGCCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNRATPPNSATSWAKHIQGLLVS*RACLSE Trigger: CTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACC...TTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTTCCAAACAAGGCACACTCCTaGCCTGCCTGTCAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PGFNFLHGSSPLSVTSVPNKAHS*PACQVS Trigger: GGATACCTGACAGGCAGGCCAGGAGTGTGCCTTGTT...TGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTCCAACCCAGGATGAGCTAAGAATCATGGCAGTTAGGTCGGGCGTGGCAAGCTTCAACCTGTaGAAACTCCTGGAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVPTQDELRIMAVRSGVASFNL*KLLEGS Trigger: GGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTGC...CACGCCCGACCTAACTGCCATGATTCTTAGCTCATCCTGGGTTGGAACCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTCCAACCCAGGATGAGCTAAGAATCATGGCAGTTAGGTCGGGCGTGCCGCGCCTACACAGTTaGGATGATTGTCAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SEVPTQDELRIMAVRSGVPRLHS*DDCQGQ Trigger: TTGTCCCTGACAATCATCCCAACTGTGTAGGCGCGG...CACGCCCGACCTAACTGCCATGATTCTTAGCTCATCCTGGGTTGGAACCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGAACTTCACGTCTGCCTaGTATCTTGGAGGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FALLSIMTGAHERACSAQNFTSA*YLGGSP Trigger: TGGACTGCCTCCAAGATACCAGGCAGACGTGAAGTT...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATATGTACTCCACATCTTaGGTTTTTAGAGCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHMYSTS*VFRAWA Trigger: CGCCCAGGCTCTAAAAACTCAAGATGTGGAGTACAT...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCACCTACACAGTTGGGATaGTTGTCAGGGACAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSPTQLG*LSGTTP Trigger: GGGGGTTGTCCCTGACAATCATCCCAACTGTGTAGG...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGCCTACACAGTTGGGATaGTTGTCAGGGACAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQPTQLG*LSGTTP Trigger: GGGGGTTGTCCCTGACAATCATCCCAACTGTGTAGG...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATGAACGGGTGAGCCAGTaGAAATCCTGGGCCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHERVSQ*KSWALR Trigger: GCGCAAGGCCCAGGATTTTCACTGGCTCACCCGTTC...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AAGACTATCTTCCAGGCAGCTAGGAGGAGGGTCTTGAAGCCCACCCCCACATTGTGTCAGGTATCCAACTaGAGAGGCAGCATAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTIFQAARRRVLKPTPTLCQVSN*RGSITS Trigger: GCTTGTTATGCTGCCTCTGCAGTTGGATACCTGACA...CAATGTGGGGGTGGGCTTCAAGACCCTCCTCCTAGCTGCCTGGAAGATAGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCCTGGAGTTGCAATTACAGGCAGTTGTGAATCACTCACTGTTGCTAAGGTGTCTTGCAGAGCCTaGCTCAGCGAGTGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVPGVAITGSCESLTVAKVSCRA*LSECWS Trigger: GCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACAC...CTTAGCAACAGTGAGTGATTCACAACTGCCTGTAATTGCAACTCCAGGGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCATTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSLMPSS*AARAIS Trigger: CGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAA...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCATGCAGCACTCCTTGTATTTTATAGAAGTCACGTTCGCCTGGAGGGTTTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RWHAALLVFYRSHVRLEGLMPSS*AARAIS Trigger: CGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAA...ACCCTCCAGGCGAACGTGACTTCTATAAAATACAAGGAGTGCTGCATGCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CCA 90 bp | CACGTTCGCCTGGAGGGTCACAAAATCTGCAGGAATGTCAATGTAACAAGCTCCTTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HVRLEGHKICRNVNVTSSLMPSS*AARAIS Trigger: CGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAA...GGAGCTTGTTACATTGACATTCCTGCAGATTTTGTGACCCTCCAGGCGAACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTAAACAAGGCACACTCCTaGCCTGCCTGTCAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLNKAHS*PACQVS Trigger: GGATACCTGACAGGCAGGCCAGGAGTGTGCCTTGTT...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTTCTATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTMFVFQGPGSSLRMIFSMPPKA*MRPGPE Trigger: TTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCAT...AGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTTCCACCGCGCCTACACAGTTaGGATGATTGTCAGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGFNFLHGSSPLSVTSVPPRLHS*DDCQGQ Trigger: TTGTCCCTGACAATCATCCCAACTGTGTAGGCGCGG...TGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTCCAACCCAGGATGAGCTAAGAATCATGGCAGTTAGGTCGGGCGTGAACTTCACGTCTGCCTaGTATCTTGGAGGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVPTQDELRIMAVRSGVNFTSA*YLGGSP Trigger: TGGACTGCCTCCAAGATACCAGGCAGACGTGAAGTT...CACGCCCGACCTAACTGCCATGATTCTTAGCTCATCCTGGGTTGGAACCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCATCCGTCCGATGTCCATaGTGTTTGCCCCCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSSVRCP*CLPPHS Trigger: TGAGTGAGGGGGCAAACACCATGGACATCGGACGGA...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTTACCAAGAGTATGATTaGCAAGTTGTACCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPSLSGGRASPWSLRPFYQEYD*QVVPAD Trigger: ATCTGCAGGTACAACTTGCCAATCATACTCTTGGTA...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGCAGGAAGACTGTTCTGGCACAGATGAGAAGTCCAAATTCAGCCTCTCCCCCTCACTCACTATaGAAGAGTCTCGGGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TGSRKTVLAQMRSPNSASPPHSL*KSLGAT Trigger: AGTTGCCCCGAGACTCTTTCATAGTGAGTGAGGGGG...AGAGGCTGAATTTGGACTTCTCATCTGTGCCAGAACAGTCTTCCTGCTTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGGCATGCAGCACTCCTTGTATTTTATAGAAGTCACGTTCGCCTGGAGGTCTGTCGCTACCCTCTaGGGAGTTACTTTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGMQHSLYFIEVTFAWRSVATL*GVTFWH Trigger: ATGCCAGAAAGTAACTCCGCAGAGGGTAGCGACAGA...CCTCCAGGCGAACGTGACTTCTATAAAATACAAGGAGTGCTGCATGCCACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATGGCACACTCCTGGCCTaGCTGTCAGGTATCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHGTLLA*LSGIQL Trigger: CAGTTGGATACCTGACAGGCAGGCCAGGAGTGTGCC...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFVHVCI*HAAQGV Trigger: CACGCCTTGGGCGGCATGGCAAATGCAAACATGAAC...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCGGTTTACTTGTGTCTTaGAGAGCCTGCCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFGLLVS*RACLSE Trigger: CTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACC...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGGTTTACTTGTGTCTTaGAGAGCCTGCCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSGLLVS*RACLSE Trigger: CTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACC...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCGCAAGCTTCAACCTGTaGAAACTCCTGGAAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFASFNL*KLLEGS Trigger: GGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTGC...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | AGTAAGTGTCCTTGTGGGATGGAGGGAGGTGCACTTAAATGGGGGAACTATTTTGAGCTCTATGGTGCTTaGCCGGGCCGAGAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKCPCGMEGGALKWGNYFELYGA*PGRELG Trigger: ACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTC...AAAATAGTTCCCCCATTTAAGTGCACCTCCCTCCATCCCACAAGGACACTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR CCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCATTCTGCCATGCTAACTaGAGGTGGCATGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSFCHAN*RWHAAL Trigger: GAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAA...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR CCA 90 bp | GGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGTCTTCTGCCATGCTAACTaGAGGTGGCATGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRHGAGEGVESSTSWSEVFCHAN*RWHAAL Trigger: GAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGAA...GACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR CCA 90 bp | AAGACTATCTTCCAGGCAGCTAGGAGGAGGGTCTTGAAGCCCACCCCCACATTGGTGTTGGAGCTCTTCTaGTGTTCGTACAAAATACCC | + |
|
Preference number: 4 (lower is better) Translates to: KTIFQAARRRVLKPTPTLVLELF*CSYKIP Trigger: GGGTATTTTGTACGAACACCAGAAGAGCTCCAACAC...CAATGTGGGGGTGGGCTTCAAGACCCTCCTCCTAGCTGCCTGGAAGATAGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR CAA 72 bp | GGAATGAGCTCTATGGTGCTTGGCCGGGCCGAGAACTaGGTATACAATCTGCAAGCTTCAACCTGTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GMSSMVLGRAEN*VYNLQASTCGN Trigger: GTTTCCACAGGTTGAAGCTTGCAGATTGTATACCAAGTTCTCGGCCCGGCCAAGCACCATAGAGCTCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
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| 3UTR CAA 72 bp | TCTGCCATGCTAACTGGAGGTGGCATGCAGCACTCCTaGTATTTTATAGAAGTCACGTTCGCCTGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAMLTGGGMQHS*YFIEVTFAWRV Trigger: GACCCTCCAGGCGAACGTGACTTCTATAAAATACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| CDS-3UTR TCA 90 bp | GTCAATGTAACAAGCTCCCGGGCGACCATAGATACTGCTCCTCACTGCCTTTTCATGTACTCCACATCTTaGGTTTTTAGAGCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VNVTSSRATIDTAPHCLFMYSTS*VFRAWA Trigger: CGCCCAGGCTCTAAAAACTCAAGATGTGGAGTACAT...GAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCCCGGGAGCTTGTTACATTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
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| CDS-3UTR TCA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATTTACTACCAAGAGTATaGTTGGCAAGTTGTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHLLPRV*LASCTC Trigger: GCAGGTACAACTTGCCAATCATACTCTTGGTAGTAA...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR TCA 90 bp | CCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTTCCACTCCAAATGCAGTCATaGCCTGCTCATAATGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGFNFLHGSSPLSVTSVPLQMQS*PAHNAS Trigger: ACTCGCATTATGAGCAGGTCATGACTGCATTTGGAG...TGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
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| CDS-3UTR GCA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCTCTGTCGCTACCCTCTaGGGAGTTACTTTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFSVATL*GVTFWH Trigger: ATGCCAGAAAGTAACTCCGCAGAGGGTAGCGACAGA...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | GGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGTCTCTGTCGCTACCCTCTaGGGAGTTACTTTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRHGAGEGVESSTSWSEVSVATL*GVTFWH Trigger: ATGCCAGAAAGTAACTCCGCAGAGGGTAGCGACAGA...GACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR GCA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATTGGAGATGGCTTCATTaGTCTTCATTTTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHWRWLH*SSFSPS Trigger: TGAGGGAGAAAATGAAGAGCAATGAAGCCATCTCCA...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGTCTGGTCTCCACTTCCATaGCAGAAAATCCGAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHGAGEGVESSTSWSEVWSPLP*QKIRRH Trigger: GTGCCTTCGGATTTTCTGGCATGGAAGTGGAGACCA...GACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | AGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTCTTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCKSRVSIPTLAGKRKFLLMPSS*AARAIS Trigger: CGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAA...GAGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCCAACAAGGCACACTCCTaGCCTGCCTGTCAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: CGSIIMLRRQGLLVSCRANKAHS*PACQVS Trigger: GGATACCTGACAGGCAGGCCAGGAGTGTGCCTTGTT...GGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| CDS-3UTR CCA 90 bp | CACAAAATCTGCAGGAATGTCAATGTAACAAGCTCCCGGGCGACCATAGATACTAACAAGGCACACTCCTaGCCTGCCTGTCAGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: HKICRNVNVTSSRATIDTNKAHS*PACQVS Trigger: GGATACCTGACAGGCAGGCCAGGAGTGTGCCTTGTT...AGTATCTATGGTCGCCCGGGAGCTTGTTACATTGACATTCCTGCAGATTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGAAGTCACGTTCGCCTaGAGGGTCACAAAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRHGAGEGVESSTSWSEEVTFA*RVTKSA Trigger: TGCAGATTTTGTGACCCTCCAGGCGAACGTGACTTC...TTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTAAGGCGTAGGCAAAAATaGCAAACTGCACTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLRRRQK*QTALLH Trigger: GTGGAGCAGTGCAGTTTGCCATTTTTGCCTACGCCT...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR CCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTGCCTCAGCGAGTGTTaGAGCTCTTCTGGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNCLSEC*SSSGVR Trigger: ACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCA...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
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| 3UTR CAA 72 bp | TGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTaGAGAAGGCAGGGTTTACTTGTGTCTTGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WALRVLCGSIIM*RRQGLLVSCRA Trigger: GGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| 3UTR CAA 72 bp | GGTGAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTaGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GEPVKILGLART*WLNHNVEKAGF Trigger: AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| CDS-3UTR TCA 90 bp | TTAGTCTCGCACCAAATAACACAATCACGTCAGCGGACTGCAAAGCCCTGGATCATGTACTCCACATCTTaGGTTTTTAGAGCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LVSHQITQSRQRTAKPWIMYSTS*VFRAWA Trigger: CGCCCAGGCTCTAAAAACTCAAGATGTGGAGTACAT...GATCCAGGGCTTTGCAGTCCGCTGACGTGATTGTGTTATTTGGTGCGAGACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
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| CDS-3UTR TCA 90 bp | GTGTGTATATTTGCAACTGTGTGCAGGTGTACGCATGAGAATGTAGCCAAAGGACCCCCTCACTCACTATaGAAGAGTCTCGGGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VCIFATVCRCTHENVAKGPPHSL*KSLGAT Trigger: AGTTGCCCCGAGACTCTTTCATAGTGAGTGAGGGGG...TCCTTTGGCTACATTCTCATGCGTACACCTGCACACAGTTGCAAATATACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR GCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATTTAGCACCAGACACCTaGTCCTCGCTTCTGTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHLAPDT*SSLLSL Trigger: TAGCGACAGAAGCGAGGAGCAGGTGTCTGGTGCTAA...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR GCA 90 bp | TATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTTCTTTAGCACCAGACACCTaGTCCTCGCTTCTGTCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YTMFVFQGPGSSLRMIFSLAPDT*SSLLSL Trigger: TAGCGACAGAAGCGAGGAGCAGGTGTCTGGTGCTAA...AGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR GCA 90 bp | GTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCGGCACACTCCTGGCCTaGCTGTCAGGTATCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLCGSIIMLRRQGLLVSCGTLLA*LSGIQL Trigger: CAGTTGGATACCTGACAGGCAGGCCAGGAGTGTGCC...GCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| CDS-3UTR GCA 90 bp | CAGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMQVQSKHSHSCGKEKIPVHVCI*HAAQGV Trigger: CACGCCTTGGGCGGCATGGCAAATGCAAACATGAAC...AGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR GCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTACCAACAGTTCATGTTTaGATTTGCCATGCCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLPTVHV*ICHAAQ Trigger: TTGGGCGGCATGGCAAATGCAAACATGAACTGTTGG...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGCCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATCCAACAGTTCATGTTTaGATTTGCCATGCCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GEPVKILGLARTLWLNHNPTVHV*ICHAAQ Trigger: TTGGGCGGCATGGCAAATGCAAACATGAACTGTTGG...ATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGGCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| CDS-3UTR GCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTAGGCGACCATAGATACTaGTCCTCACTGCCTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLGDHRY*SSLPFQ Trigger: TTGAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCC...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR GCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATCACAGCAGAGGTTTCTaGCATGCTAACTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHHSRGF*HANWRW Trigger: CCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTG...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR GCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCACCCTTTGCCTCCAAATaGAGTCATGACCTGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSPFASK*SHDLLI Trigger: TATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGG...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
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| CDS-3UTR GCA 90 bp | CACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACCACTACAGTTACCCTTTGCCTCCAAATaGAGTCATGACCTGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HLLTVPPPGPSIFKPLQLPFASK*SHDLLI Trigger: TATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGG...TAACTGTAGTGGTTTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR CCA 90 bp | CCAGTCCCTGGAGTTGCAATTACAGGCAGTTGTGAATCACTCACTGTTGCTAAGAGGCGTAGGCAAAAATaGCAAACTGCACTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVPGVAITGSCESLTVAKRRRQK*QTALLH Trigger: GTGGAGCAGTGCAGTTTGCCATTTTTGCCTACGCCT...CTTAGCAACAGTGAGTGATTCACAACTGCCTGTAATTGCAACTCCAGGGACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR CCA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCATCCGTCCGATGTCCATaGTGTTTGCCCCCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTKRRIMAVSVQGSSPVASVRCP*CLPPHS Trigger: TGAGTGAGGGGGCAAACACCATGGACATCGGACGGA...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| CDS-3UTR CCA 90 bp | CCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTTCCAGTGTTGGAGCTCTTCTaGTGTTCGTACAAAATACCC | + |
|
Preference number: 4 (lower is better) Translates to: PGFNFLHGSSPLSVTSVPVLELF*CSYKIP Trigger: GGGTATTTTGTACGAACACCAGAAGAGCTCCAACAC...TGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR CCA 90 bp | CAGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTTGCCTCAGCGAGTGTTaGAGCTCTTCTGGTGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QMQVQSKHSHSCGKEKIPCLSEC*SSSGVR Trigger: ACGAACACCAGAAGAGCTCCAACACTCGCTGAGGCA...AGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR CAA 72 bp | AATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTaGCAGAGCCTGCCTCAGCGAGTGTTGGAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHNVEKAGFTCV*QSLPQRVLELF Trigger: GAAGAGCTCCAACACTCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| CDS-3UTR GCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACCCAACAGTTCATGTTTaGATTTGCCATGCCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNPTVHV*ICHAAQ Trigger: TTGGGCGGCATGGCAAATGCAAACATGAACTGTTGG...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | TTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAAACTTGGTATACAATCTaGAAGCTTCAACCTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FNRATPPNSATSWAKHIQTWYTI*KLQPVE Trigger: TTCCACAGGTTGAAGCTTGCAGATTGTATACCAAGT...TTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCCTGGAGTTGCAATTACAGGCAGTTGTGAATCACTCACTGTTGCTAAGGGCGACCATAGATACTaGTCCTCACTGCCTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVPGVAITGSCESLTVAKGDHRY*SSLPFQ Trigger: TTGAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCC...CTTAGCAACAGTGAGTGATTCACAACTGCCTGTAATTGCAACTCCAGGGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCACACAGCAGAGGTTTCTaGCATGCTAACTGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTKRRIMAVSVQGSSPVAHSRGF*HANWRW Trigger: CCACCTCCAGTTAGCATGGCAGAAACCTCTGCTGTG...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | TATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTTCTGCAAAAATGGCAAACTaGACTGCTCCACCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTMFVFQGPGSSLRMIFSAKMAN*TAPPAS Trigger: GGAAGCTGGTGGAGCAGTGCAGTTTGCCATTTTTGC...AGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACCCCTTTGCCTCCAAATaGAGTCATGACCTGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNPFASK*SHDLLI Trigger: TATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGG...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACGTGGTAGAACACTGTGTAATAATTCATAGGGAGGGACTTTTGGGAAGCTTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNVVEHCVIIHREGLLGSLMPSS*AARAIS Trigger: CGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAA...GCTTCCCAAAAGTCCCTCCCTATGAATTATTACACAGTGTTCTACCACGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATCATGCTAACTGGAGGTaGCATGCAGCACTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHHANWR*HAALLV Trigger: TACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATG...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | TATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTTCTCATGCTAACTGGAGGTaGCATGCAGCACTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTMFVFQGPGSSLRMIFSHANWR*HAALLV Trigger: TACAAGGAGTGCTGCATGCCACCTCCAGTTAGCATG...AGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATAGTTGTACCTGCAGATaGTCTCCACTTCCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHSCTCR*SPLPCQ Trigger: CTGGCATGGAAGTGGAGACCATCTGCAGGTACAACT...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGAAATCACAGAAGGCCTaGCATTATTCCCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQKSQKA*HYSPVL Trigger: AAGAACTGGGGAATAATGTCAGGCCTTCTGTGATTT...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCAACACAGATGACCCGCTaGCCAGGACTTCTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KTKRRIMAVSVQGSSPVATQMTR*PGLLSL Trigger: TAAAGACAGAAGTCCTGGGCAGCGGGTCATCTGTGT...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTATATTTGCAACTGTGTGCAGGTGTACGCATGAGAATGTAGCCAAAGGATGGTCTCCACTTCCATaGCAGAAAATCCGAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCIFATVCRCTHENVAKGWSPLP*QKIRRH Trigger: GTGCCTTCGGATTTTCTGGCATGGAAGTGGAGACCA...TCCTTTGGCTACATTCTCATGCGTACACCTGCACACAGTTGCAAATATACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATAGAAGTCACGTTCGCCTaGAGGGTCACAAAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNIEVTFA*RVTKSA Trigger: TGCAGATTTTGTGACCCTCCAGGCGAACGTGACTTC...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CCA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCAAGTTGTACCTGCAGATaGTCTCCACTTCCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTKRRIMAVSVQGSSPVASCTCR*SPLPCQ Trigger: CTGGCATGGAAGTGGAGACCATCTGCAGGTACAACT...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATAATGTACTCCACATCTTaGGTTTTTAGAGCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNIMYSTS*VFRAWA Trigger: CGCCCAGGCTCTAAAAACTCAAGATGTGGAGTACAT...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTACTACCAAGAGTATaGTTGGCAAGTTGTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNLLPRV*LASCTC Trigger: GCAGGTACAACTTGCCAATCATACTCTTGGTAGTAA...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR TCA 90 bp | GGATCTGACACACTCACACTTGCGGGAAAGAGAAAATTCCTCATAACCATCAAGCTCCAAATGCAGTCATaGCCTGCTCATAATGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSDTLTLAGKRKFLITIKLQMQS*PAHNAS Trigger: ACTCGCATTATGAGCAGGTCATGACTGCATTTGGAG...CTTGATGGTTATGAGGAATTTTCTCTTTCCCGCAAGTGTGAGTGTGTCAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140078.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCACTCCAAATGCAGTCATaGCCTGCTCATAATGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTKRRIMAVSVQGSSPVALQMQS*PAHNAS Trigger: ACTCGCATTATGAGCAGGTCATGACTGCATTTGGAG...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATATGTCAGGTATCCAACTaGAGAGGCAGCATAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNICQVSN*RGSITS Trigger: GCTTGTTATGCTGCCTCTGCAGTTGGATACCTGACA...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGATACTGCTCCTCACTaGCTTTTCAATAATAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: REPGFNFLHGSSPLSVTSDTAPH*LFNNKR Trigger: CCGTTTATTATTGAAAAGGCAGTGAGGAGCAGTATC...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGGATACTGCTCCTCACTaGCTTTTCAATAATAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQDTAPH*LFNNKR Trigger: CCGTTTATTATTGAAAAGGCAGTGAGGAGCAGTATC...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTCAATAAACTTCACGTCTaGCTGGTATCTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCKSRVSIPTLAGKRKFLNKLHV*LVSWRQ Trigger: CTGCCTCCAAGATACCAGGCAGACGTGAAGTTTATT...GAGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACCCAGTTCCTTGGAGATaGCTTCATTGCTCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNPVPWR*LHCSSF Trigger: AAATGAAGAGCAATGAAGCCATCTCCAAGGAACTGG...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGGTATACAATCTaGAAGCTTCAACCAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLARTLWLNHNVEKAGFTWYTI*KLQPTV Trigger: AACTGTTGGTTGAAGCTTGCAGATTGTATACCAAGT...AAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| CDS-3UTR CCA 90 bp | TATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTTCTCCAGTTCCTTGGAGATaGCTTCATTGCTCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YTMFVFQGPGSSLRMIFSPVPWR*LHCSSF Trigger: AAATGAAGAGCAATGAAGCCATCTCCAAGGAACTGG...AGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATAGTGTTGGAGCTCTTCTaGTGTTCGTACAAAATACCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNIVLELF*CSYKIP Trigger: GGGTATTTTGTACGAACACCAGAAGAGCTCCAACAC...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| 3UTR CAA 72 bp | GTAGAACACTGTGTAATAATTCATAGGGAGGGACTTTaGGGAAGCCAGTTCCTTGGAGATGGCTTCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEHCVIIHREGL*GSQFLGDGFIA Trigger: AGCAATGAAGCCATCTCCAAGGAACTGGCTTCCCAAAAGTCCCTCCCTATGAATTATTACACAGTGTTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | ACCATAGATACTGCTCCTCACTGCCTTTTCAATAATAAACGGAATGAGCTCTATTCTGTCGCTACCCTCTaGGGAGTTACTTTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TIDTAPHCLFNNKRNELYSVATL*GVTFWH Trigger: ATGCCAGAAAGTAACTCCGCAGAGGGTAGCGACAGA...ATAGAGCTCATTCCGTTTATTATTGAAAAGGCAGTGAGGAGCAGTATCTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATACGCACGCAGAACATACTTGGTATACAATCTaGAAGCTTCAACCTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSSRGSDTLTLEYTHAEHTWYTI*KLQPVE Trigger: TTCCACAGGTTGAAGCTTGCAGATTGTATACCAAGT...ATGTTCTGCGTGCGTATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTGTCCTTGTGGGATGGAGGGAGGTGCACTTAAATGGGGGAACTATTTTGAGGGTCACAAAATCTaGAGGAATGTCAATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SKCPCGMEGGALKWGNYFEGHKI*RNVNVT Trigger: TGTTACATTGACATTCCTGCAGATTTTGTGACCCTC...AAAATAGTTCCCCCATTTAAGTGCACCTCCCTCCATCCCACAAGGACACTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATATGGAGATGGCTTCATTaGTCTTCATTTTCTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNIWRWLH*SSFSPS Trigger: TGAGGGAGAAAATGAAGAGCAATGAAGCCATCTCCA...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR CCA 90 bp | AGTAAGTGTCCTTGTGGGATGGAGGGAGGTGCACTTAAATGGGGGAACTATTTTTACCAAGAGTATGATTaGCAAGTTGTACCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKCPCGMEGGALKWGNYFYQEYD*QVVPAD Trigger: ATCTGCAGGTACAACTTGCCAATCATACTCTTGGTA...AAAATAGTTCCCCCATTTAAGTGCACCTCCCTCCATCCCACAAGGACACTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
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| 3UTR CAA 72 bp | CTCACTCACTATGAAAGAGTCTCGGGGCAACTGTTCTaGAACGTGGTAGAACACTGTGTAATAATTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTHYERVSGQLF*NVVEHCVIIHR Trigger: CCTATGAATTATTACACAGTGTTCTACCACGTTCAAGAACAGTTGCCCCGAGACTCTTTCATAGTGAGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | ATTATTGTTTACTACCAAGAGTATGATTGGCAAGTTGTACCTGCAGATGGTCTCTGTCAGGTATCCAACTaGAGAGGCAGCATAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIVYYQEYDWQVVPADGLCQVSN*RGSITS Trigger: GCTTGTTATGCTGCCTCTGCAGTTGGATACCTGACA...GAGACCATCTGCAGGTACAACTTGCCAATCATACTCTTGGTAGTAAACAATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
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| CDS-3UTR GCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATAGAGGGTCACAAAATCTaGAGGAATGTCAATGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNIEGHKI*RNVNVT Trigger: TGTTACATTGACATTCCTGCAGATTTTGTGACCCTC...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
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| CDS-3UTR GCA 90 bp | CAGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTATTCCCCAGTTCTTCTaGACAGATATCAATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QMQVQSKHSHSCGKEKIPIPQFF*TDINLN Trigger: ATTCAGATTGATATCTGTGCAGAAGAACTGGGGAAT...AGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCAGCGTCAAAACCTTGGTAAATTCCATTATTGTTTACTACCAAGAGTATGTCAGGTATCCAACTaGAGAGGCAGCATAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCQRQNLGKFHYCLLPRVCQVSN*RGSITS Trigger: GCTTGTTATGCTGCCTCTGCAGTTGGATACCTGACA...TACTCTTGGTAGTAAACAATAATGGAATTTACCAAGGTTTTGACGCTGACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR GCA 90 bp | CCACTGTCTGTAACTTCAGTTCCAGGGGATCTGACACACTCACACTTGAATATAATTCCCCAGTTCTTCTaGACAGATATCAATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSVTSVPGDLTHSHLNIIPQFF*TDINLN Trigger: ATTCAGATTGATATCTGTGCAGAAGAACTGGGGAAT...TATATTCAAGTGTGAGTGTGTCAGATCCCCTGGAACTGAAGTTACAGACAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR GCA 90 bp | TCAAACTGTTCTAAAAGCTGTTTAGAGACAGCATCTATATCTCCTAGCAAAATCTCAACAGTTCATGTTTaGATTTGCCATGCCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNCSKSCLETASISPSKISTVHV*ICHAAQ Trigger: TTGGGCGGCATGGCAAATGCAAACATGAACTGTTGA...GATTTTGCTAGGAGATATAGATGCTGTCTCTAAACAGCTTTTAGAACAGTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165955.8 |
||
| CDS CCA 90 bp | GCCGCTTGCTCATTCCGCATCCCAATGTACTTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCGGTCACGGGGATGCCTACGACACCG | + |
|
Preference number: 5 (lower is better) Translates to: AACSFRIPMYLMPSS*AARAISVTGMPTTP Trigger: CGGTGTCGTAGGCATCCCCGTGACCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGAGCAAGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000022437.16 ENSMUST00000127204.9 ENSMUST00000134626.8 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTGGGTTTACTTGTGTCTaGCAGAGCCTGCCTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LQPSLSGGRASPWSLRPFGFTCV*QSLPQR Trigger: TCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCC...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS TCA 90 bp | GCCAACAGTTCATGTTTGCATTTGCCATGCCGCCCAAGGCGTGGATaGGACCGGGACCAGAAACAACAAGGCACACTCCTGGCCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANSSCLHLPCRPRRG*DRDQKQQGTLLACL Trigger: CAGGCAGGCCAGGAGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000167066.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTAGTTCATGTTTGCATTaGCCATGCCGCCCAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LQPSLSGGRASPWSLRPFSSCLH*PCRPRR Trigger: ACGCCTTGGGCGGCATGGCAAATGCAAACATGAACT...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTTGGGAAGCCAGTTCCTaGGAGATGGCTTCATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQPSLSGGRASPWSLRPFWEASS*EMASLL Trigger: GAGCAATGAAGCCATCTCCAAGGAACTGGCTTCCCA...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS TCA 90 bp | AGGCAGCATAACAAGCCGCTTGCTCATTCCGCATCCCAATGTACTTaGTGCCCAGTTCCTGGGCAGCAAGGGCGATTTCGGTCACGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQHNKPLAHSASQCT*CPVPGQQGRFRSRG Trigger: TCCCCGTGACCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGAGCAAGCGGCTTGTTATGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000022437.16 ENSMUST00000127204.9 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
||
| CDS TCA 90 bp | ACCAACAGTTCATGTTTGCATTTGCCATGCCGCCCAAGGCGTGGATaGGACCGGGACCAGAAACAACAAGGCACACTCCTGGCCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TNSSCLHLPCRPRRG*DRDQKQQGTLLACL Trigger: CAGGCAGGCCAGGAGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| CDS CCA 90 bp | AAGGGCCAACAGTTCATGTTTGCATTTGCCATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAAACAACAAGGCACACTCCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGQQFMFAFAMPPKA*MRPGPETTRHTPGL Trigger: CAGGCCAGGAGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000167066.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGCTGCCTCAGCGAGTGTaGGAGCTCTTCTGGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FALLSIMTGAHERACSAQLPQRV*ELFWCS Trigger: CGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAG...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS TCA 90 bp | AATCACAATCAAGGGCCGCTTGCTCATTCCGCATCCCAATGTACTTaGTGCCCAGTTCCTGGGCAGCAAGGGCGATTTCGGTCACGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NHNQGPLAHSASQCT*CPVPGQQGRFRSRG Trigger: TCCCCGTGACCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGAGCAAGCGGCCCTTGATTGTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCCCTCGCTCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTAGTATGATTGGCAAGTaGTACCTGCAGATGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQPSLSGGRASPWSLRPFSMIGK*YLQMVS Trigger: GGAGACCATCTGCAGGTACAACTTGCCAATCATACT...AAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGAGCGAGGGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | TTCAACAGGGCCACACCTCCTAACAGTGCCACCTCCTGGGCCAAGCATATTCAACTGCCTCAGCGAGTGTaGGAGCTCTTCTGGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FNRATPPNSATSWAKHIQLPQRV*ELFWCS Trigger: CGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAG...TTGAATATGCTTGGCCCAGGAGGTGGCACTGTTAGGAGGTGTGGCCCTGTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATGGGTTTACTTGTGTCTaGCAGAGCCTGCCTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHGFTCV*QSLPQR Trigger: TCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCC...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS CCA 90 bp | TTCAACCAACAGTTCATGTTTGCATTTGCCATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAAACAACAAGGCACACTCCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FNQQFMFAFAMPPKA*MRPGPETTRHTPGL Trigger: CAGGCCAGGAGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTGGTGGACGTGCCAGTCCATGGTCACTTCGCCCTTTTGTCCATCATGACACGCATCCCAATGTACTaGATGCCCAGTTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVVDVPVHGHFALLSIMTRIPMY*MPSSWA Trigger: TGCCCAGGAACTGGGCATCAAGTACATTGGGATGCG...TGTCATGATGGACAAAAGGGCGAAGTGACCATGGACTGGCACGTCCACCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | AGGAATGTCAATGTAACAAGCTCCCGGGCGACCATAGATACTGCTCCTCACTGCCGCATCCCAATGTACTaGATGCCCAGTTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RNVNVTSSRATIDTAPHCRIPMY*MPSSWA Trigger: TGCCCAGGAACTGGGCATCAAGTACATTGGGATGCG...GCAGTGAGGAGCAGTATCTATGGTCGCCCGGGAGCTTGTTACATTGACATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGCGTCTGCCTGGTATCTaGGAGGCAGTCCAAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: FALLSIMTGAHERACSAQRLPGI*EAVQNV Trigger: TACATTTTGGACTGCCTCCAAGATACCAGGCAGACG...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCACTGCCTCAGCGAGTGTaGGAGCTCTTCTGGTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: REPGFNFLHGSSPLSVTSLPQRV*ELFWCS Trigger: CGAACACCAGAAGAGCTCCAACACTCGCTGAGGCAG...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR CAA 90 bp | CCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTTCCAGAAGGCAGGGTTTACTaGTGTCTTGCAGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGFNFLHGSSPLSVTSVPEGRVY*CLAEPA Trigger: GGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTC...TGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS GCA 90 bp | AGAACCACCAATCACAATCAAGGGCCAACAGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTGGATGAGACCGGGACCAGAAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTTNHNQGPTVHVCI*HAAQGVDETGTRNN Trigger: GTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGCCCTTGATTGTGATTGGTGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000167066.8 |
||
| CDS-3UTR CAA 90 bp | GTCAATGTAACAAGCTCCCGGGCGACCATAGATACTGCTCCTCACTGCCTTTTCAGTTCATGTTTGCATTaGCCATGCCGCCCAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VNVTSSRATIDTAPHCLFSSCLH*PCRPRR Trigger: ACGCCTTGGGCGGCATGGCAAATGCAAACATGAACT...GAAAAGGCAGTGAGGAGCAGTATCTATGGTCGCCCGGGAGCTTGTTACATTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| CDS-3UTR CAA 90 bp | CCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGTTCCACATAGGGAGGGACTTTaGGGAAGCCAGTTCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGFNFLHGSSPLSVTSVPHREGL*GSQFLG Trigger: TCCAAGGAACTGGCTTCCCAAAAGTCCCTCCCTATG...TGGAACTGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCTTGAAGCCCACCCCCACATTGACACACTTCCTCCAACAAGGCCACATAGTATGATTGGCAAGTaGTACCTGCAGATGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGLEAHPHIDTLPPTRPHSMIGK*YLQMVS Trigger: GGAGACCATCTGCAGGTACAACTTGCCAATCATACT...ATGTGGCCTTGTTGGAGGAAGTGTGTCAATGTGGGGGTGGGCTTCAAGACCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCGGGTTTACTTGTGTCTaGCAGAGCCTGCCTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFGFTCV*QSLPQR Trigger: TCGCTGAGGCAGGCTCTGCAAGACACAAGTAAACCC...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR CAA 90 bp | TTGGGGCTGGCTTACAGTTTCAGAGGTTCAGTTCATTATCATGATGGCGGGCAGGAAGGCAGGGTTTACTaGTGTCTTGCAGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLAYSFRGSVHYHDGGQEGRVY*CLAEPA Trigger: GGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTC...CTGCCCGCCATCATGATAATGAACTGAACCTCTGAAACTGTAAGCCAGCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCAGCCAACAGTTCATGTTaGCATTTGCCATGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: REPGFNFLHGSSPLSVTSANSSC*HLPCRP Trigger: TGGGCGGCATGGCAAATGCAAACATGAACTGTTGGC...TGAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | TTCGCCCTTTTGTCCATCATGACAGGGGCTCATGAAAGGGCTTGCTCAGCCCAGCGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FALLSIMTGAHERACSAQRTKYP*PPNAVM Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACG...CTGGGCTGAGCAAGCCCTTTCATGAGCCCCTGTCATGATGGACAAAAGGGCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCACGTTCGCCTGGAGGGTCACAAAATCTGCAGGAATGTCAATGTAACACGCATCCCAATGTACTaGATGCCCAGTTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSHVRLEGHKICRNVNVTRIPMY*MPSSWA Trigger: TGCCCAGGAACTGGGCATCAAGTACATTGGGATGCG...TGTTACATTGACATTCCTGCAGATTTTGTGACCCTCCAGGCGAACGTGACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134626.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGAAAATCCTGGGCCTTGCGCGTACTTTGTGGCTCAATCATAATGTTGAGAGTTCATGTTTGCATTaGCCATGCCGCCCAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PVKILGLARTLWLNHNVESSCLH*PCRPRR Trigger: ACGCCTTGGGCGGCATGGCAAATGCAAACATGAACT...CTCAACATTATGATTGAGCCACAAAGTACGCGCAAGGCCCAGGATTTTCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGTTCCAACCCAGGATGAGCTAAGAATCATGGCAGTTAGGTCGGGCGTGGGCATGCAGCACTCCTaGTATTTTATAGAAGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SEVPTQDELRIMAVRSGVGMQHS*YFIEVT Trigger: CGTGACTTCTATAAAATACAAGGAGTGCTGCATGCC...CACGCCCGACCTAACTGCCATGATTCTTAGCTCATCCTGGGTTGGAACCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGACATGGTGCTGGAGAAGGAGTTGAGAGTTCTACATCTTGGTCAGAAGTCCGTCTGCCTGGTATCTaGGAGGCAGTCCAAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRHGAGEGVESSTSWSEVRLPGI*EAVQNV Trigger: TACATTTTGGACTGCCTCCAAGATACCAGGCAGACG...GACTTCTGACCAAGATGTAGAACTCTCAACTCCTTCTCCAGCACCATGTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | CATGACCTGCTCATAATGCGAGTTTGGCAAGAGGCACATTGGAGGGACAGTTGTACCAACAGTTCATGTTaGCATTTGCCATGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HDLLIMRVWQEAHWRDSCTNSSC*HLPCRP Trigger: TGGGCGGCATGGCAAATGCAAACATGAACTGTTGGT...ACAACTGTCCCTCCAATGTGCCTCTTGCCAAACTCGCATTATGAGCAGGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
||
| CDS TCA 90 bp | CTCCTCACTGCCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTTaGTTTCTTTCAGAAGAACCACCAATCACAATCAAGGGCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTACGNSWKAPIAS*FLSEEPPITIKGQQ Trigger: CTGTTGGCCCTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGCAGTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167066.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCACGCATCCCAATGTACTaGATGCCCAGTTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTKRRIMAVSVQGSSPVARIPMY*MPSSWA Trigger: TGCCCAGGAACTGGGCATCAAGTACATTGGGATGCG...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | AGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTCAGTTCATGTTTGCATTaGCCATGCCGCCCAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RCKSRVSIPTLAGKRKFLSSCLH*PCRPRR Trigger: ACGCCTTGGGCGGCATGGCAAATGCAAACATGAACT...GAGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTGTCCTTGTGGGATGGAGGGAGGTGCACTTAAATGGGGGAACTATTTTGCCAACAGTTCATGTTaGCATTTGCCATGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKCPCGMEGGALKWGNYFANSSC*HLPCRP Trigger: TGGGCGGCATGGCAAATGCAAACATGAACTGTTGGC...AAAATAGTTCCCCCATTTAAGTGCACCTCCCTCCATCCCACAAGGACACTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | AGATGCAAGTCCAGAGTAAGCATTCCCACTCTTGCGGGAAAGAGAAAATTCCTCGATGATAAGCAGGGGTaGCTTGGCATCCCGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RCKSRVSIPTLAGKRKFLDDKQG*LGIPKN Trigger: GTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATC...GAGGAATTTTCTCTTTCCCGCAAGAGTGGGAATGCTTACTCTGGACTTGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | TATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTTCTCATAGGGAGGGACTTTaGGGAAGCCAGTTCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YTMFVFQGPGSSLRMIFSHREGL*GSQFLG Trigger: TCCAAGGAACTGGCTTCCCAAAAGTCCCTCCCTATG...AGAAAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | GGATCTGACACACTCACACTTGCGGGAAAGAGAAAATTCCTCATAACCATCAAGGAAGGCAGGGTTTACTaGTGTCTTGCAGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSDTLTLAGKRKFLITIKEGRVY*CLAEPA Trigger: GGCAGGCTCTGCAAGACACAAGTAAACCCTGCCTTC...CTTGATGGTTATGAGGAATTTTCTCTTTCCCGCAAGTGTGAGTGTGTCAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140078.9 |
||
| CDS TCA 90 bp | CAAGCTTCAACCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTTaGTTTCTTTCAGAAGAACCACCAATCACAATCAAGGGCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QASTCGNSWKAPIAS*FLSEEPPITIKGLP Trigger: AGGCAGGCCCTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127204.9 |
||
| CDS-3UTR CAA 90 bp | CTTTGTGGCTCAATCATAATGTTGAGAAGGCAGGGTTTACTTGTGTCTTGCAGACGCATCCCAATGTACTaGATGCCCAGTTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCGSIIMLRRQGLLVSCRRIPMY*MPSSWA Trigger: TGCCCAGGAACTGGGCATCAAGTACATTGGGATGCG...TCTGCAAGACACAAGTAAACCCTGCCTTCTCAACATTATGATTGAGCCACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165955.8 ENSMUST00000171414.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACTTCGGCATGCAGCACTCCTaGTATTTTATAGAAGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: KRTRVQFPAWQLTTVCNFGMQHS*YFIEVT Trigger: CGTGACTTCTATAAAATACAAGGAGTGCTGCATGCC...GAAGTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | GTGTGTATATTTGCAACTGTGTGCAGGTGTACGCATGAGAATGTAGCCAAAGGAGATGATAAGCAGGGGTaGCTTGGCATCCCGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VCIFATVCRCTHENVAKGDDKQG*LGIPKN Trigger: GTTCTTCGGGATGCCAAGCAACCCCTGCTTATCATC...TCCTTTGGCTACATTCTCATGCGTACACCTGCACACAGTTGCAAATATACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022437.16 |
||
| CDS-3UTR CAA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCATGGGAAGCCAGTTCCTaGGAGATGGCTTCATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KTKRRIMAVSVQGSSPVAWEASS*EMASLL Trigger: GAGCAATGAAGCCATCTCCAAGGAACTGGCTTCCCA...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS TCA 90 bp | CAAGCTTCAACCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTTaGTTTCTTTCAGAAGAACCACCAATCACAATCAAGGGCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: QASTCGNSWKAPIAS*FLSEEPPITIKGQQ Trigger: CTGTTGGCCCTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | GGATCTGACACACTCACACTTGCGGGAAAGAGAAAATTCCTCATAACCATCAAGCGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: GSDTLTLAGKRKFLITIKRTKYP*PPNAVM Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACG...CTTGATGGTTATGAGGAATTTTCTCTTTCCCGCAAGTGTGAGTGTGTCAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140078.9 |
||
| CDS-3UTR CAA 90 bp | AAAACAAAAAGAAGAATCATGGCAGTTAGTGTGCAAGGCAGCTCACCTGTGGCACGTACAAAATACCCTTaGCCTCCAAATGCAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KTKRRIMAVSVQGSSPVARTKYP*PPNAVM Trigger: CATGACTGCATTTGGAGGCAAAGGGTATTTTGTACG...TGCCACAGGTGAGCTGCCTTGCACACTAACTGCCATGATTCTTCTTTTTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAGAGAACCCGGGTTCAATTTCCTGCATGGCAGCTCACCACTGTCTGTAACGTCAGCGTCAAAACCTaGGTAAATTCCATTATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FKRTRVQFPAWQLTTVCNVSVKT*VNSIIV Trigger: AACAATAATGGAATTTACCAAGGTTTTGACGCTGAC...GTTACAGACAGTGGTGAGCTGCCATGCAGGAAATTGAACCCGGGTTCTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000140078.9 |
||
| CDS-3UTR CAA 90 bp | GTATATACCATGTTTGTCTTCCAGGGTCCGGGTTCCTCACTCAGGATGATCTTTGTCAGCGTCAAAACCTaGGTAAATTCCATTATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VYTMFVFQGPGSSLRMIFVSVKT*VNSIIV Trigger: AACAATAATGGAATTTACCAAGGTTTTGACGCTGAC...AAAGATCATCCTGAGTGAGGAACCCGGACCCTGGAAGACAAACATGGTATATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156431.8 |
||
| CDS-3UTR CAA 90 bp | GGATCTGACACACTCACACTTGCGGGAAAGAGAAAATTCCTCATAACCATCAAGGTCAGCGTCAAAACCTaGGTAAATTCCATTATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSDTLTLAGKRKFLITIKVSVKT*VNSIIV Trigger: AACAATAATGGAATTTACCAAGGTTTTGACGCTGAC...CTTGATGGTTATGAGGAATTTTCTCTTTCCCGCAAGTGTGAGTGTGTCAGATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140078.9 |
||
| CDS TCA 72 bp | CAAGGGCCGCTTGCTCATTCCGCATCCCAATGTACTTaGTGCCCAGTTCCTGGGCAGCAAGGGCGATTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QGPLAHSASQCT*CPVPGQQGRFR Trigger: CCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGAGCAAGCGGCCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| CDS CCA 72 bp | GATGAGACCGGGACCAGAAACAACAAGGCACACTCCTaGCCTGCCTGTCAGGTATCCAACTGCAGAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DETGTRNNKAHS*PACQVSNCRGS Trigger: GCTGCCTCTGCAGTTGGATACCTGACAGGCAGGCCAGGAGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
||
| CDS CAA 90 bp | CAATCACAATCAAGGGCCGCTTGCTCATTCCGCATCCCAATGTACTaGATGCCCAGTTCCTGGGCAGCAAGGGCGATTTCGGTCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSQSRAACSFRIPMY*MPSSWAARAISVTG Trigger: CCCCGTGACCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGAGCAAGCGGCCCTTGATTGTGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134626.8 |
||
| CDS GCA 72 bp | GTTCCTGGGCAGCAAGGGCGATTTCGGTCACGGGGATaGCTACGACACCGAACATGTACTCCACATCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VPGQQGRFRSRG*LRHRTCTPHLE Trigger: CTCAAGATGTGGAGTACATGTTCGGTGTCGTAGGCATCCCCGTGACCGAAATCGCCCTTGCTGCCCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000022437.16 ENSMUST00000127204.9 ENSMUST00000134626.8 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
||
| CDS GCA 72 bp | AAGGCACACTCCTGGCCTGCCTGTCAGGTATCCAACTaGAGAGGCAGCATAACAAGCCGCTTGCTCATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: KAHSWPACQVSN*RGSITSRLLIP Trigger: CGGAATGAGCAAGCGGCTTGTTATGCTGCCTCTGCAGTTGGATACCTGACAGGCAGGCCAGGAGTGTGCCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
||
| CDS CCA 72 bp | TCATTCCGCATCCCAATGTACTTGATGCCCAGTTCCTaGGCAGCAAGGGCGATTTCGGTCACGGGGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFRIPMYLMPSS*AARAISVTGMP Trigger: AGGCATCCCCGTGACCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000022437.16 ENSMUST00000127204.9 ENSMUST00000134626.8 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
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| CDS TCA 72 bp | AACAAGCCGCTTGCTCATTCCGCATCCCAATGTACTTaGTGCCCAGTTCCTGGGCAGCAAGGGCGATTTCGG | + |
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Preference number: 6 (lower is better) Translates to: NKPLAHSASQCT*CPVPGQQGRFR Trigger: CCGAAATCGCCCTTGCTGCCCAGGAACTGGGCATCAAGTACATTGGGATGCGGAATGAGCAAGCGGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000022437.16 ENSMUST00000127204.9 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
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| CDS TCA 72 bp | TCATGTTTGCATTTGCCATGCCGCCCAAGGCGTGGATaGGACCGGGACCAGAAACAACAAGGCACACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SCLHLPCRPRRG*DRDQKQQGTLL Trigger: CAGGAGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
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| CDS GCA 72 bp | AATCACAATCAAGGGCCAACAGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTGGATGAGACCGGGACC | + |
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Preference number: 6 (lower is better) Translates to: NHNQGPTVHVCI*HAAQGVDETGT Trigger: GGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGCCCTTGATTGTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000167066.8 |
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| CDS GCA 72 bp | ATCTGCAAGCTTCAACCAACAGTTCATGTTTGCATTTaGCATGCCGCCCAAGGCGTGGATGAGACCGGGACC | + |
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Preference number: 6 (lower is better) Translates to: ICKLQPTVHVCI*HAAQGVDETGT Trigger: GGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGTTGAAGCTTGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| CDS CCA 72 bp | CAGTTCATGTTTGCATTTGCCATGCCGCCCAAGGCGTaGATGAGACCGGGACCAGAAACAACAAGGCACACT | + |
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Preference number: 6 (lower is better) Translates to: QFMFAFAMPPKA*MRPGPETTRHT Trigger: AGTGTGCCTTGTTGTTTCTGGTCCCGGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000165955.8 ENSMUST00000167066.8 ENSMUST00000171414.8 |
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| CDS GCA 72 bp | ACCACCAATCACAATCAAGGGCCAACAGTTCATGTTTaGATTTGCCATGCCGCCCAAGGCGTGGATGAGACC | + |
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Preference number: 6 (lower is better) Translates to: TTNHNQGPTVHV*ICHAAQGVDET Trigger: GGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGCCCTTGATTGTGATTGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 ENSMUST00000167066.8 |
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| CDS GCA 72 bp | AATCACAATCAAGGGCCTGCCTGTCAGGTATCCAACTaGAGAGGCAGCATAACAAGCCGCTTGCTCATTCCG | + |
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Preference number: 6 (lower is better) Translates to: NHNQGPACQVSN*RGSITSRLLIP Trigger: CGGAATGAGCAAGCGGCTTGTTATGCTGCCTCTGCAGTTGGATACCTGACAGGCAGGCCCTTGATTGTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127204.9 |
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| CDS CAA 90 bp | GCAAGCTTCAACCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTaGATTTCTTTCAGAAGAACCACCAATCACAATCAAGGGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASFNLWKLLEGSHSF*ISFRRTTNHNQGPA Trigger: GGCAGGCCCTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127204.9 |
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| CDS CAA 90 bp | GCTCCTCACTGCCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTaGATTTCTTTCAGAAGAACCACCAATCACAATCAAGGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: APHCLWKLLEGSHSF*ISFRRTTNHNQGPT Trigger: TGTTGGCCCTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGCAGTGAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167066.8 |
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| CDS GCA 72 bp | TATACAATCTGCAAGCTTCAACCAACAGTTCATGTTTaGATTTGCCATGCCGCCCAAGGCGTGGATGAGACC | + |
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Preference number: 6 (lower is better) Translates to: YTICKLQPTVHV*ICHAAQGVDET Trigger: GGTCTCATCCACGCCTTGGGCGGCATGGCAAATGCAAACATGAACTGTTGGTTGAAGCTTGCAGATTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171414.8 |
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| CDS CAA 90 bp | GCAAGCTTCAACCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTaGATTTCTTTCAGAAGAACCACCAATCACAATCAAGGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: ASFNLWKLLEGSHSF*ISFRRTTNHNQGPT Trigger: TGTTGGCCCTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGTTGAAGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022437.16 ENSMUST00000156431.8 |
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| CDS TCA 72 bp | GCCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTTaGTTTCTTTCAGAAGAACCACCAATCACAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: ACGNSWKAPIAS*FLSEEPPITIK Trigger: CTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167066.8 |
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| CDS TCA 72 bp | ACCTGTGGAAACTCCTGGAAGGCTCCCATAGCTTCTTaGTTTCTTTCAGAAGAACCACCAATCACAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: TCGNSWKAPIAS*FLSEEPPITIK Trigger: CTTGATTGTGATTGGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTTTCCACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022437.16 ENSMUST00000127204.9 ENSMUST00000156431.8 |
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| CDS CAA 72 bp | GTAGAACACTGTGTAATAATTCATAGGGAGGGACTTTaGGGAAGCCAGTTCCTGTTTAGAGACAGCATCTAT | + |
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Preference number: 6 (lower is better) Translates to: VEHCVIIHREGL*GSQFLFRDSIY Trigger: ATAGATGCTGTCTCTAAACAGGAACTGGCTTCCCAAAAGTCCCTCCCTATGAATTATTACACAGTGTTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167066.8 |
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