Pregenerated sensors for HABP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021476Ensembl transcript IDs: ENSMUST00000021929.10, ENSMUST00000221904.2
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GTGGCTGTTAGGCCAGGGCGGGGAAGTCCTCAGGGTCATCCGGGTTaGGAGCAACATCTTGGGTCACCACTTCTGCACGGGGGCCATAGT | + |
Preference number: 1 (lower is better) Translates to: VAVRPGRGSPQGHPG*EQHLGSPLLHGGHS Trigger: ACTATGGCCCCCGTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACTTCCCCGCCCTGGCCTAACAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | TCTCGACAGCTGCCCAACACCTTGGCTCGTCCCTCCCACATACAATaGATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGG | + |
Preference number: 1 (lower is better) Translates to: SRQLPNTLARPSHIQ*IFPSFAGGWVAGPR Trigger: CCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTATGTGGGAGGGACGAGCCAAGGTGTTGGGCAGCTGTCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR GCA 90 bp | GACTCTTCTCGCGGCAAGGAAAGTCTCTTCATAGTGCTGCTCTGCTaGAGGGGAGTGGCTGTTAGGCCAGGGCGGGGAAGTCCTCAGGGT | + |
Preference number: 1 (lower is better) Translates to: DSSRGKESLFIVLLC*RGVAVRPGRGSPQG Trigger: ACCCTGAGGACTTCCCCGCCCTGGCCTAACAGCCACTCCCCTGCAGCAGAGCAGCACTATGAAGAGACTTTCCTTGCCGCGAGAAGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 90 bp | CTTCATTTATACCTGGGTTCCAGTTCAGCACCATCTCAGACTTTGTaGCCAAGGCGGGTAGCACAGGTCTGGGGAGCAGGGTTCCATTGC | + |
Preference number: 1 (lower is better) Translates to: LHLYLGSSSAPSQTL*PRRVAQVWGAGFHC Trigger: GCAATGGAACCCTGCTCCCCAGACCTGTGCTACCCGCCTTGGCCACAAAGTCTGAGATGGTGCTGAACTGGAACCCAGGTATAAATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CCA 90 bp | AACAGGCAAACCTCCCTTCCTAATCTCGACAGCTGCCCAACACCTTaGCTCGTCCCTCCCACATACAATGAATCTTCCCTAGTTTTGCCG | + |
Preference number: 1 (lower is better) Translates to: NRQTSLPNLDSCPTP*LVPPTYNESSLVLP Trigger: CGGCAAAACTAGGGAAGATTCATTGTATGTGGGAGGGACGAGCCAAGGTGTTGGGCAGCTGTCGAGATTAGGAAGGGAGGTTTGCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR GCA 90 bp | CAACACTCAATCAAAAAGCTGACTGTGGCAGGGCACATCTATAGCTaGAGCACCAGGGAGGCAAAGACAGTCTTCTTGGAGCTCACTAGC | + |
Preference number: 1 (lower is better) Translates to: QHSIKKLTVAGHIYS*STREAKTVFLELTS Trigger: GCTAGTGAGCTCCAAGAAGACTGTCTTTGCCTCCCTGGTGCTGCAGCTATAGATGTGCCCTGCCACAGTCAGCTTTTTGATTGAGTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | GAGGATGTGTGCACGCACAGACCACGAGGTAGTTTAAATCACTACTaGAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGT | + |
Preference number: 1 (lower is better) Translates to: EDVCTHRPRGSLNHY*KPVHFLCFRVVVPS Trigger: ACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGTGATTTAAACTACCTCGTGGTCTGTGCGTGCACACATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CCA 90 bp | GGAACTGGCTTCTATTTTTACCTGTTTCCCAGCCTGATGGCACAGTaGTTTCACAGGAAGCTTTATCCTGTCTCTGGTGGAACATCCCAA | + |
Preference number: 1 (lower is better) Translates to: GTGFYFYLFPSLMAQ*FHRKLYPVSGGTSQ Trigger: TTGGGATGTTCCACCAGAGACAGGATAAAGCTTCCTGTGAAACCACTGTGCCATCAGGCTGGGAAACAGGTAAAAATAGAAGCCAGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | ACTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTaGCTCTTCTCGCGGCAAGGAAAGTCTCTTCATAGTGCTGCTCTG | + |
Preference number: 1 (lower is better) Translates to: TSHDTGKATSIVLRV*LFSRQGKSLHSAAL Trigger: CAGAGCAGCACTATGAAGAGACTTTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR TCA 90 bp | AGACGACTGTTCATCACAGCCATCTGCATGGTTTCATGCTGTGACTaGCAACAGGAATTCTTACATTCTACACCCGGGTGCTTCAGAGTT | + |
Preference number: 1 (lower is better) Translates to: RRLFITAICMVSCCD*QQEFLHSTPGCFRV Trigger: AACTCTGAAGCACCCGGGTGTAGAATGTAAGAATTCCTGTTGTCAGTCACAGCATGAAACCATGCAGATGGCTGTGATGAACAGTCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | ATGTGGTTTGAGGAACTGGCTTCTATTTTTACCTGTTTCCCAGCCTaGTGGCACAGTGGTTTCACAGGAAGCTTTATCCTGTCTCTGGTG | + |
Preference number: 1 (lower is better) Translates to: MWFEELASIFTCFPA*WHSGFTGSFILSLV Trigger: CACCAGAGACAGGATAAAGCTTCCTGTGAAACCACTGTGCCATCAGGCTGGGAAACAGGTAAAAATAGAAGCCAGTTCCTCAAACCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | CTAAGACACTGTCTAACACAAGCAAAACAATACTTCAGACTGGCATaGAACTTTGGCGATCTTGCACTCAGGGTCCCAAGCACCGGGAAT | + |
Preference number: 1 (lower is better) Translates to: LRHCLTQAKQYFRLA*NFGDLALRVPSTGN Trigger: ATTCCCGGTGCTTGGGACCCTGAGTGCAAGATCGCCAAAGTTTCATGCCAGTCTGAAGTATTGTTTTGCTTGTGTTAGACAGTGTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | ATTCCAATAGATCTCTGGAGCCAGGAAGATGGATCTGATGTGGTTTaGGGAACTGGCTTCTATTTTTACCTGTTTCCCAGCCTGATGGCA | + |
Preference number: 1 (lower is better) Translates to: IPIDLWSQEDGSDVV*GTGFYFYLFPSLMA Trigger: TGCCATCAGGCTGGGAAACAGGTAAAAATAGAAGCCAGTTCCTCAAACCACATCAGATCCATCTTCCTGGCTCCAGAGATCTATTGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | GTACAAAGGGATCACAGAACTTATGTTCCCAGCTATTGCTTCAACTaGTCAACTGACCCATTGGAAGATAAGCACTCATGGTGGTGCACA | + |
Preference number: 1 (lower is better) Translates to: VQRDHRTYVPSYCFN*STDPLEDKHSWWCT Trigger: TGTGCACCACCATGAGTGCTTATCTTCCAATGGGTCAGTTGATCAGTTGAAGCAATAGCTGGGAACATAAGTTCTGTGATCCCTTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 90 bp | GTAATATCCAGCAGGGAAGACGACTGTTCATCACAGCCATCTGCATaGTTTCATGCTGTGACTGACAACAGGAATTCTTACATTCTACAC | + |
Preference number: 1 (lower is better) Translates to: VISSREDDCSSQPSA*FHAVTDNRNSYILH Trigger: GTGTAGAATGTAAGAATTCCTGTTGTCAGTCACAGCATGAAACCATGCAGATGGCTGTGATGAACAGTCGTCTTCCCTGCTGGATATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 90 bp | GGGCCACACAACCTGAGGCTGAACCAAAGCTTTTCTCACTATAAATaGCCTCAGGCATTTTTCAACAGTGCTAGAAATCTAACAAACTTC | + |
Preference number: 1 (lower is better) Translates to: GPHNLRLNQSFSHYK*PQAFFNSARNLTNF Trigger: GAAGTTTGTTAGATTTCTAGCACTGTTGAAAAATGCCTGAGGTCATTTATAGTGAGAAAAGCTTTGGTTCAGCCTCAGGTTGTGTGGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | TCTGGCTCCCCGACCAGGGCGAGGGAGGTTACCAAAGTTAATCTCCAGCTGGGAGCTGTTTGGGGTGATTaGGCCTCTGAGGTGGTCCCT | + |
Preference number: 2 (lower is better) Translates to: SGSPTRAREVTKVNLQLGAVWGD*ASEVVP Trigger: AGGGACCACCTCAGAGGCTCAATCACCCCAAACAGC...TCCCAGCTGGAGATTAACTTTGGTAACCTCCCTCGCCCTGGTCGGGGAGCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | AGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCACGGATCTGCCTGCCACTaGCTCCCAAGTGCTAGGTTT | + |
Preference number: 2 (lower is better) Translates to: SPQGHPGWEQHLGSPLLHGSACH*LPSARF Trigger: AAACCTAGCACTTGGGAGGCAGTGGCAGGCAGATCC...GTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | TCGCAGTCAGGAGATGTGACTGAGTTACAAGTCAGTCTGCTCAGAGTCCACAGTAGACCAGGCTGGCCTTaGACTCGGGATCTGCCTGCC | + |
Preference number: 2 (lower is better) Translates to: SQSGDVTELQVSLLRVHSRPGWP*TRDLPA Trigger: GGCAGGCAGATCCCGAGTTCAAGGCCAGCCTGGTCT...ACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | AGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCACGCTTGGTCTACAGAGTaGGTTCCAGGACAAGCAGGA | + |
Preference number: 2 (lower is better) Translates to: SPQGHPGWEQHLGSPLLHAWSTE*VPGQAG Trigger: TCCTGCTTGTCCTGGAACTCACTCTGTAGACCAAGC...GTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | GGTAGAAGTAAGTCCTGCTGGATGCGGTGGCTCGCGCCTTTAGTCCCAACATTTCTTGAACTCGGGATCTaGCTGCCACTGCCTCCCAAG | + |
Preference number: 2 (lower is better) Translates to: GRSKSCWMRWLAPLVPTFLELGI*LPLPPK Trigger: CTTGGGAGGCAGTGGCAGGCAGATCCCGAGTTCAAG...AAATGTTGGGACTAAAGGCGCGAGCCACCGCATCCAGCAGGACTTACTTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCCGCAGTCAGGAGATGTaGCTGAGTTACAAGTCAGTC | + |
Preference number: 2 (lower is better) Translates to: YNESSLVLPVGGWPALGLRSQEM*LSYKSV Trigger: GACTGACTTGTAACTCAGTCACATCTCCTGACTGCG...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | AGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCACCTGTGCCTCTTTCACTaGGAGACCAGACTTTCAAGG | + |
Preference number: 2 (lower is better) Translates to: SPQGHPGWEQHLGSPLLHLCLFH*ETRLSR Trigger: CCTTGAAAGTCTGGTCTCTCAGTGAAAGAGGCACAG...GTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | GAAGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCAAACTTTGGCGATCTTaGACTCAGGGTCCCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: EVLRVIRVGSNILGHHFCKLWRS*TQGPKH Trigger: GTGCTTGGGACCCTGAGTGCAAGATCGCCAAAGTTT...GCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CAA 90 bp | AACCTTCATTTATACCTGGGTTCCAGTTCAGCACCATCTCAGACTTaGTGGCCAAGGCGGGTAGCACAGGTCTGGGGAGCAGGGTTCCAT | + |
Preference number: 2 (lower is better) Translates to: NLHLYLGSSSAPSQT*WPRRVAQVWGAGFH Trigger: ATGGAACCCTGCTCCCCAGACCTGTGCTACCCGCCTTGGCCACAAAGTCTGAGATGGTGCTGAACTGGAACCCAGGTATAAATGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCATTGTTCTTAGAGTCTaGCTCTTCTCGCGGCAAGGA | + |
Preference number: 2 (lower is better) Translates to: YNESSLVLPVGGWPALGLIVLRV*LFSRQG Trigger: TCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAAT...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | GGTAGAAGTAAGTCCTGCTGGATGCGGTGGCTCGCGCCTTTAGTCCCAACATTTAAGCACTCATGGTGGTaGACAGCTCAGGGTGCTGAA | + |
Preference number: 2 (lower is better) Translates to: GRSKSCWMRWLAPLVPTFKHSWW*TAQGAE Trigger: TTCAGCACCCTGAGCTGTGCACCACCATGAGTGCTT...AAATGTTGGGACTAAAGGCGCGAGCCACCGCATCCAGCAGGACTTACTTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCATTGAGCCTCTGAGGTaGTCCCTAACCTTAAACCTC | + |
Preference number: 2 (lower is better) Translates to: YNESSLVLPVGGWPALGLIEPLR*SLTLNL Trigger: GAGGTTTAAGGTTAGGGACCACCTCAGAGGCTCAAT...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | CAGCCGAGGGGAGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTGACTGAGTTACAGAACAATAAGGTCTaGACAACACTGAAGTCCTTA | + |
Preference number: 2 (lower is better) Translates to: QPRGGPSPCSQSGDVTELQNNKV*TTLKSL Trigger: TAAGGACTTCAGTGTTGTGCAGACCTTATTGTTCTG...TAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCTCCCCTCGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | GAAGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCGCTTTATCCTGTCTCTaGTGGAACATCCCAAAACGT | + |
Preference number: 2 (lower is better) Translates to: EVLRVIRVGSNILGHHFCALSCL*WNIPKR Trigger: ACGTTTTGGGATGTTCCACCAGAGACAGGATAAAGC...GCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTTCTGCTGCAGGGGAGTaGCTGTTAGGCCAGGGCGGG | + |
Preference number: 2 (lower is better) Translates to: LHTTREKQHLLFLESDSSSAAGE*LLGQGG Trigger: CCCGCCCTGGCCTAACAGCCACTCCCCTGCAGCAGA...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CAA 90 bp | GGAATGGTGTCTGACCGTGCTATCAGCAGGCCAGGGGCTTCTCTTTaGTTTCTAGAGCTGGGCAGAGGAAGCAGGGCTATTAAAATACTG | + |
Preference number: 2 (lower is better) Translates to: GMVSDRAISRPGASL*FLELGRGSRAIKIL Trigger: CAGTATTTTAATAGCCCTGCTTCCTCTGCCCAGCTCTAGAAACAAAAGAGAAGCCCCTGGCCTGCTGATAGCACGGTCAGACACCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | CCTAGTGCACAATGTCTAAACCACAACTCAGGGATTTTCTCAGAATTGAGCAGTAGACCAGGCTGGCCTTaGACTCGGGATCTGCCTGCC | + |
Preference number: 2 (lower is better) Translates to: PSAQCLNHNSGIFSELSSRPGWP*TRDLPA Trigger: GGCAGGCAGATCCCGAGTTCAAGGCCAGCCTGGTCT...ACTGCTCAATTCTGAGAAAATCCCTGAGTTGTGGTTTAGACATTGTGCACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | GAGGTGGTCCCTAACCTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAACACAGCTCAGGGTGCTaGAGCAGGAGGATAGTTTTA | + |
Preference number: 2 (lower is better) Translates to: EVVPNLKPPPEALRTTPEHSSGC*SRRIVL Trigger: TAAAACTATCCTCCTGCTTCAGCACCCTGAGCTGTG...TTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAGGTTAGGGACCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | AGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCACGGATCTGATGTGGTTTaGGGAACTGGCTTCTATTTT | + |
Preference number: 2 (lower is better) Translates to: SPQGHPGWEQHLGSPLLHGSDVV*GTGFYF Trigger: AAAATAGAAGCCAGTTCCTCAAACCACATCAGATCC...GTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCCTAGGTTTAAAGGCGTaGGCCACCACGCCCAGCAGT | + |
Preference number: 2 (lower is better) Translates to: FLVLFFKTHSVDQAGLELLGLKA*ATTPSS Trigger: ACTGCTGGGCGTGGTGGCGCACGCCTTTAAACCTAG...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACGGATCTGCCTGCCACTaGCTCCCAAGTGCTAGGTTT | + |
Preference number: 2 (lower is better) Translates to: TTENQYTSSASEWLSLVHGSACH*LPSARF Trigger: AAACCTAGCACTTGGGAGGCAGTGGCAGGCAGATCC...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACGGGGTCAGAAGCAGGTaGTCACCCAAAGCAACATCC | + |
Preference number: 2 (lower is better) Translates to: TTENQYTSSASEWLSLVHGVRSR*SPKATS Trigger: GGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCC...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | TACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTCCACAGAGCTATTTCCACACCCACTaGGACTGGGCTATTATGTGC | + |
Preference number: 2 (lower is better) Translates to: YKSLYLGKGPDLMGTPQSYFHTH*DWAIMC Trigger: GCACATAATAGCCCAGTCTCAGTGGGTGTGGAAATA...GCTCTGTGGAGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCAGAGGAGAACAAGAATaGCAAATAGCAAGGTCCTAT | + |
Preference number: 2 (lower is better) Translates to: YNESSLVLPVGGWPALGLRGEQE*QIARSY Trigger: ATAGGACCTTGCTATTTGGCATTCTTGTTCTCCTCT...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | AGGGAAGACGACTGTTCATCACAGCCATCTGCATGGTTTCATGCTGTGACTGACGAACAGAAACAAGAATaGCAAGCGGCAGGCCAGCAA | + |
Preference number: 2 (lower is better) Translates to: REDDCSSQPSAWFHAVTDEQKQE*QAAGQQ Trigger: TTGCTGGCCTGCCGCTTGGCATTCTTGTTTCTGTTC...GTCAGTCACAGCATGAAACCATGCAGATGGCTGTGATGAACAGTCGTCTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | CTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAACTGGGGCCCAGCCGAAGTTTAAATCACTACTaGAAACCAGTACACTTCCTC | + |
Preference number: 2 (lower is better) Translates to: LKPPPEALRTTPELGPSRSLNHY*KPVHFL Trigger: GAGGAAGTGTACTGGTTTTCAGTAGTGATTTAAACT...TCGGCTGGGCCCCAGTTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR TCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACCGCAGTCAGGAGATGTaGCTGAGTTACAAGTCAGTC | + |
Preference number: 2 (lower is better) Translates to: TTENQYTSSASEWLSLVHRSQEM*LSYKSV Trigger: GACTGACTTGTAACTCAGTCACATCTCCTGACTGCG...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | GACTTGAGTTTATATGCCCAACACTCAATCAAAAAGCTGACTGTGGCAGGGCACGATAAGCACTCATGGTaGTGCACAGCTCAGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: DLSLYAQHSIKKLTVAGHDKHSW*CTAQGA Trigger: AGCACCCTGAGCTGTGCACCACCATGAGTGCTTATC...GTGCCCTGCCACAGTCAGCTTTTTGATTGAGTGTTGGGCATATAAACTCAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | GAAGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCTTTAAGAACAATCCCTaGCTAAATTCTGCAATGACC | + |
Preference number: 2 (lower is better) Translates to: EVLRVIRVGSNILGHHFCFKNNP*LNSAMT Trigger: GGTCATTGCAGAATTTAGCCAGGGATTGTTCTTAAA...GCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CAA 90 bp | AGCGGTTCTCCACGTGTCCTGAAATACTCAAGGACTTTTCTCGTCTaGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTC | + |
Preference number: 2 (lower is better) Translates to: SGSPRVLKYSRTFLV*FFKTHSVDQAGLEL Trigger: GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAAAGTCCTTGAGTATTTCAGGACACGTGGAGAACCGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR CAA 90 bp | GGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTaGATGACTCAACCAAACCCCAAGAGTTCAGAGGGAATACAATAC | + |
Preference number: 2 (lower is better) Translates to: GVRSRWSPKATSSST*MTQPNPKSSEGIQY Trigger: GTATTGTATTCCCTCTGAACTCTTGGGGTTTGGTTGAGTCATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR-3UTR TCA 90 bp | ACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGATCCCTCCCACATACAATaGATCTTCCCTAGTTTTGCC | + |
Preference number: 2 (lower is better) Translates to: TWGQKQVVTQSNILINFDPSHIQ*IFPSFA Trigger: GGCAAAACTAGGGAAGATTCATTGTATGTGGGAGGG...ATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR CAA 90 bp | AGGCAAAGACAGTCTTCTTGGAGCTCACTAGCCAGTCTAGTTGCATaGGTGAGGCCCAGGTTCACTGAGATCTTGTCTCGGAAAATAAAA | + |
Preference number: 2 (lower is better) Translates to: RQRQSSWSSLASLVA*VRPRFTEILSRKIK Trigger: TTTTATTTTCCGAGACAAGATCTCAGTGAACCTGGGCCTCACCAATGCAACTAGACTGGCTAGTGAGCTCCAAGAAGACTGTCTTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR TCA 90 bp | GACTTGAGTTTATATGCCCAACACTCAATCAAAAAGCTGACTGTGGCAGGGCACATTGTTCTTAGAGTCTaGCTCTTCTCGCGGCAAGGA | + |
Preference number: 2 (lower is better) Translates to: DLSLYAQHSIKKLTVAGHIVLRV*LFSRQG Trigger: TCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAAT...GTGCCCTGCCACAGTCAGCTTTTTGATTGAGTGTTGGGCATATAAACTCAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR TCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACAGCTATTGCTTCAACTaGTCAACTGACCCATTGGAA | + |
Preference number: 2 (lower is better) Translates to: TTENQYTSSASEWLSLVHSYCFN*STDPLE Trigger: TTCCAATGGGTCAGTTGATCAGTTGAAGCAATAGCT...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR GCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGTGCACCTGGAAACTaGCATGATGTGGATCTCAAA | + |
Preference number: 2 (lower is better) Translates to: FLVLFFKTHSVDQAGLELSAPGN*HDVDLK Trigger: TTTGAGATCCACATCATGGCAGTTTCCAGGTGCACT...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR GCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCTGCACATTTTTAATGTaGTGCCCTGGTGGTCTGTGT | + |
Preference number: 2 (lower is better) Translates to: FLVLFFKTHSVDQAGLELCTFLM*CPGGLC Trigger: ACACAGACCACCAGGGCAGCACATTAAAAATGTGCA...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR GCA 90 bp | CTTTCCGGAAGACGTGAGACTCATCCTCATAGTCCTCCTTCACCATCTGAAAGAAGCCATCTCCACAGATaGACATTTTTAATGTGCTGC | + |
Preference number: 2 (lower is better) Translates to: LSGRRETHPHSPPSPSERSHLHR*TFLMCC Trigger: GCAGCACATTAAAAATGTGCATCTGTGGAGATGGCT...TCTTTCAGATGGTGAAGGAGGACTATGAGGATGAGTCTCACGTCTTCCGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR CCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACACCTTCATTTATACCTaGGTTCCAGTTCAGCACCAT | + |
Preference number: 2 (lower is better) Translates to: TTENQYTSSASEWLSLVHTFIYT*VPVQHH Trigger: ATGGTGCTGAACTGGAACCCAGGTATAAATGAAGGT...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR-3UTR CCA 90 bp | CTTTCCGGAAGACGTGAGACTCATCCTCATAGTCCTCCTTCACCATCTGAAAGAATTCCAATAGATCTCTaGAGCCAGGAAGATGGATCT | + |
Preference number: 2 (lower is better) Translates to: LSGRRETHPHSPPSPSERIPIDL*SQEDGS Trigger: AGATCCATCTTCCTGGCTCCAGAGATCTATTGGAAT...TCTTTCAGATGGTGAAGGAGGACTATGAGGATGAGTCTCACGTCTTCCGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR TCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTGAGAGGATTGCATTCTaGTCATCAAAAGGCAGAGCC | + |
Preference number: 2 (lower is better) Translates to: LHTTREKQHLLFLESDSSERIAF*SSKGRA Trigger: GGCTCTGCCTTTTGATGATCAGAATGCAATCCTCTC...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR TCA 90 bp | ACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGATGTTTCATGCTGTGACTaGCAACAGGAATTCTTACAT | + |
Preference number: 2 (lower is better) Translates to: TWGQKQVVTQSNILINFDVSCCD*QQEFLH Trigger: ATGTAAGAATTCCTGTTGTCAGTCACAGCATGAAAC...ATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR CCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACTGTGGTTTGAGGAACTaGCTTCTATTTTTACCTGTT | + |
Preference number: 2 (lower is better) Translates to: TTENQYTSSASEWLSLVHCGLRN*LLFLPV Trigger: AACAGGTAAAAATAGAAGCCAGTTCCTCAAACCACA...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR-3UTR CCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTGATCAACTGACCCATTaGAAGATAAGCACTCATGGT | + |
Preference number: 2 (lower is better) Translates to: LHTTREKQHLLFLESDSSDQLTH*KISTHG Trigger: ACCATGAGTGCTTATCTTCCAATGGGTCAGTTGATC...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CCA 90 bp | AAGCTCGGTGACTCAGCTAACTTGGTTACCTCAAATATTCCAATAGATCTCTGGTTTTGGGCCACAGTCTaGCAAGCAAATAAGGTTTTC | + |
Preference number: 2 (lower is better) Translates to: KLGDSANLVTSNIPIDLWFWATV*QANKVF Trigger: GAAAACCTTATTTGCTTGCCAGACTGTGGCCCAAAA...CCAGAGATCTATTGGAATATTTGAGGTAACCAAGTTAGCTGAGTCACCGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CAA 90 bp | GTGCGCCACCACGCCCAGCAGTTCTATTTTCTAACTTACTTTACTTaGTACTTCTGTGCTGGGATTGTTAGAATCTATGTACACATTTTA | + |
Preference number: 2 (lower is better) Translates to: VRHHAQQFYFLTYFT*YFCAGIVRIYVHIL Trigger: TAAAATGTGTACATAGATTCTAACAATCCCAGCACAGAAGTACAAAGTAAAGTAAGTTAGAAAATAGAACTGCTGGGCGTGGTGGCGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR-3UTR GCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTGCAAATAAGGTTTTCTaGCATCTGTTTGCATTTTTG | + |
Preference number: 2 (lower is better) Translates to: LHTTREKQHLLFLESDSSANKVF*HLFAFL Trigger: CAAAAATGCAAACAGATGGCAGAAAACCTTATTTGC...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR GCA 72 bp | TCTCTGTTCTTCTCATTCTCCCTCGGCCTCCCCGGGTaGTGCCTCTGGCTCCCCGACCAGGGCGAGGGAGGT | + |
Preference number: 3 (lower is better) Translates to: SLFFSFSLGLPG*CLWLPDQGEGG Trigger: ACCTCCCTCGCCCTGGTCGGGGAGCCAGAGGCAGCACCCGGGGAGGCCGAGGGAGAATGAGAAGAACAGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR CCA 72 bp | TTCTCATTCTCCCTCGGCCTCCCCGGGTGCTGCCTCTaGCTCCCCGACCAGGGCGAGGGAGGTTACCAAAGT | + |
Preference number: 3 (lower is better) Translates to: FSFSLGLPGCCL*LPDQGEGGYQS Trigger: ACTTTGGTAACCTCCCTCGCCCTGGTCGGGGAGCCAGAGGCAGCACCCGGGGAGGCCGAGGGAGAATGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 72 bp | AGGCCAGGGCGGGGAAGTCCTCAGGGTCATCCGGGTTaGGAGCAACATCTTGGGTCACCACTTCTGCACGGG | + |
Preference number: 3 (lower is better) Translates to: RPGRGSPQGHPG*EQHLGSPLLHG Trigger: CCCGTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACTTCCCCGCCCTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 72 bp | CTGCCCAACACCTTGGCTCGTCCCTCCCACATACAATaGATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCC | + |
Preference number: 3 (lower is better) Translates to: LPNTLARPSHIQ*IFPSFAGGWVA Trigger: GGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTATGTGGGAGGGACGAGCCAAGGTGTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR-3UTR CAA 90 bp | GGTAGAAGTAAGTCCTGCTGGATGCGGTGGCTCGCGCCTTTAGTCCCAACATTTGAATCTTCCCTAGTTTaGCCGGTGGGTGGGTGGCCG | + |
Preference number: 3 (lower is better) Translates to: GRSKSCWMRWLAPLVPTFESSLV*PVGGWP Trigger: CGGCCACCCACCCACCGGCAAAACTAGGGAAGATTC...AAATGTTGGGACTAAAGGCGCGAGCCACCGCATCCAGCAGGACTTACTTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CAA 90 bp | TCTGGCTCCCCGACCAGGGCGAGGGAGGTTACCAAAGTTAATCTCCAGCTGGGACCAGGGGCTTCTCTTTaGTTTCTAGAGCTGGGCAGA | + |
Preference number: 3 (lower is better) Translates to: SGSPTRAREVTKVNLQLGPGASL*FLELGR Trigger: TCTGCCCAGCTCTAGAAACAAAAGAGAAGCCCCTGG...TCCCAGCTGGAGATTAACTTTGGTAACCTCCCTCGCCCTGGTCGGGGAGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 72 bp | GGGGAGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTaGCTGAGTTACAAGTCAGTCTGCTCAGAGTCCACA | + |
Preference number: 3 (lower is better) Translates to: GEGPAHVRSQEM*LSYKSVCSEST Trigger: TGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR TCA 72 bp | GTGGCCGGCCCTAGGTCTCAAGCTGTTTGGGGTGATTaGGCCTCTGAGGTGGTCCCTAACCTTAAACCTCCA | + |
Preference number: 3 (lower is better) Translates to: VAGPRSQAVWGD*ASEVVPNLKPP Trigger: TGGAGGTTTAAGGTTAGGGACCACCTCAGAGGCTCAATCACCCCAAACAGCTTGAGACCTAGGGCCGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR GCA 72 bp | GGGTCAGACGGGCACAGGCGCAGCCATCTCCACAGATaGACATTTTTAATGTGCTGCCCTGGTGGTCTGTGT | + |
Preference number: 3 (lower is better) Translates to: GSDGHRRSHLHR*TFLMCCPGGLC Trigger: ACACAGACCACCAGGGCAGCACATTAAAAATGTGCATCTGTGGAGATGGCTGCGCCTGTGCCCGTCTGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 72 bp | AGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTGACTaGGTTACAAGTCAGTCTGCTCAGAGTCCACAGTGC | + |
Preference number: 3 (lower is better) Translates to: RAQPMFAVRRCD*VTSQSAQSPQC Trigger: GCACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CCA 72 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTaGCCGGCCCTAGGTCTCAAGCTGTTTGGGGTGATT | + |
Preference number: 3 (lower is better) Translates to: YNESSLVLPVGG*PALGLKLFGVI Trigger: AATCACCCCAAACAGCTTGAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CCA 72 bp | CCAGGGCGAGGGAGGTTACCAAAGTTAATCTCCAGCTaGGATGTGATGTCATTGGCAGCTTTCCGGAAGACG | + |
Preference number: 3 (lower is better) Translates to: PGRGRLPKLISS*DVMSLAAFRKT Trigger: CGTCTTCCGGAAAGCTGCCAATGACATCACATCCCAGCTGGAGATTAACTTTGGTAACCTCCCTCGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR GCA 72 bp | ATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTaGACGGGGGCCATAGTTCTCTGTTCTTCTCATTCT | + |
Preference number: 3 (lower is better) Translates to: IRVGSNILGHHF*TGAIVLCSSHS Trigger: AGAATGAGAAGAACAGAGAACTATGGCCCCCGTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR GCA 72 bp | ATCAAAAAGCTGACTGTGGCAGGGCACATCTATAGCTaGAGCACCAGGGAGGCAAAGACAGTCTTCTTGGAG | + |
Preference number: 3 (lower is better) Translates to: IKKLTVAGHIYS*STREAKTVFLE Trigger: CTCCAAGAAGACTGTCTTTGCCTCCCTGGTGCTGCAGCTATAGATGTGCCCTGCCACAGTCAGCTTTTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 72 bp | GTCTATTCAGGTAGAAGTAAGTCCTGCTGGATGCGGTaGCTCGCGCCTTTAGTCCCAACATTTAGGAGACTG | + |
Preference number: 3 (lower is better) Translates to: VYSGRSKSCWMR*LAPLVPTFRRL Trigger: CAGTCTCCTAAATGTTGGGACTAAAGGCGCGAGCCACCGCATCCAGCAGGACTTACTTCTACCTGAATAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CAA 90 bp | CTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAACTGGGGCCCAGCCGATACAAAATAAATGTTTaGGTGGTGGGGAGAGGAGAA | + |
Preference number: 3 (lower is better) Translates to: LKPPPEALRTTPELGPSRYKINV*VVGRGE Trigger: TTCTCCTCTCCCCACCACCAAAACATTTATTTTGTA...TCGGCTGGGCCCCAGTTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 72 bp | GTTCTGGATAGAGACACTTGGACACGTGGCTGGTTTTaGGCCACAGTCTGGCAAGCAAATAAGGTTTTCTGC | + |
Preference number: 3 (lower is better) Translates to: VLDRDTWTRGWF*ATVWQANKVFC Trigger: GCAGAAAACCTTATTTGCTTGCCAGACTGTGGCCCAAAACCAGCCACGTGTCCAAGTGTCTCTATCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR GCA 72 bp | TCACCAGTCATGACTGACCAAAGTGCACCTGGAAACTaGCATGATGTGGATCTCAAAGGACCCATAGTGATG | + |
Preference number: 3 (lower is better) Translates to: SPVMTDQSAPGN*HDVDLKGPIVM Trigger: CATCACTATGGGTCCTTTGAGATCCACATCATGGCAGTTTCCAGGTGCACTTTGGTCAGTCATGACTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 72 bp | TTCCCAGCTATTGCTTCAACTGATCAACTGACCCATTaGAAGATAAGCACTCATGGTGGTGCACAGCTCAGG | + |
Preference number: 3 (lower is better) Translates to: FPAIASTDQLTH*KISTHGGAQLR Trigger: CCTGAGCTGTGCACCACCATGAGTGCTTATCTTCCAATGGGTCAGTTGATCAGTTGAAGCAATAGCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CAA 90 bp | GACCGTGCTATCAGCAGGCCAGGGGCTTCTCTTTTGTTTCTAGAGCTGGGCAGACTAACTTACTTTACTTaGTACTTCTGTGCTGGGATT | + |
Preference number: 3 (lower is better) Translates to: DRAISRPGASLLFLELGRLTYFT*YFCAGI Trigger: AATCCCAGCACAGAAGTACAAAGTAAAGTAAGTTAG...TCTGCCCAGCTCTAGAAACAAAAGAGAAGCCCCTGGCCTGCTGATAGCACGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR TCA 72 bp | CAAGTTCTAGTCCTTTCCATCATCCTTGATGAAGCTTaGACAGAAACAAGAATGCCAAGCGGCAGGCCAGCA | + |
Preference number: 3 (lower is better) Translates to: QVLVLSIILDEA*TETRMPSGRPA Trigger: TGCTGGCCTGCCGCTTGGCATTCTTGTTTCTGTTCAAGCTTCATCAAGGATGATGGAAAGGACTAGAACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR TCA 72 bp | AATAAGGTTTTCTGCCATCTGTTTGCATTTTTGATGTaGCAGGCCCAAAGCCACTGGGCCACACAACCTGAG | + |
Preference number: 3 (lower is better) Translates to: NKVFCHLFAFLM*QAQSHWATQPE Trigger: CTCAGGTTGTGTGGCCCAGTGGCTTTGGGCCTGTCACATCAAAAATGCAAACAGATGGCAGAAAACCTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR TCA 72 bp | GAGGAACTGGCTTCTATTTTTACCTGTTTCCCAGCCTaGTGGCACAGTGGTTTCACAGGAAGCTTTATCCTG | + |
Preference number: 3 (lower is better) Translates to: EELASIFTCFPA*WHSGFTGSFIL Trigger: CAGGATAAAGCTTCCTGTGAAACCACTGTGCCATCAGGCTGGGAAACAGGTAAAAATAGAAGCCAGTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR GCA 72 bp | ACAATACTTCAGACTGGCATGAAACTTTGGCGATCTTaGACTCAGGGTCCCAAGCACCGGGAATATATGCAT | + |
Preference number: 3 (lower is better) Translates to: TILQTGMKLWRS*TQGPKHREYMH Trigger: ATGCATATATTCCCGGTGCTTGGGACCCTGAGTGCAAGATCGCCAAAGTTTCATGCCAGTCTGAAGTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR CCA 72 bp | AGCAGGGAAGACGACTGTTCATCACAGCCATCTGCATaGTTTCATGCTGTGACTGACAACAGGAATTCTTAC | + |
Preference number: 3 (lower is better) Translates to: SREDDCSSQPSA*FHAVTDNRNSY Trigger: GTAAGAATTCCTGTTGTCAGTCACAGCATGAAACCATGCAGATGGCTGTGATGAACAGTCGTCTTCCCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CAA 90 bp | GAGGTGGTCCCTAACCTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAACTAACTTACTTTACTTaGTACTTCTGTGCTGGGATT | + |
Preference number: 3 (lower is better) Translates to: EVVPNLKPPPEALRTTPELTYFT*YFCAGI Trigger: AATCCCAGCACAGAAGTACAAAGTAAAGTAAGTTAG...TTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAGGTTAGGGACCACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR-3UTR CAA 90 bp | ACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGATGTAAAAAGTCTGATGTaGGTCTCTGGAAACAGAACC | + |
Preference number: 3 (lower is better) Translates to: TWGQKQVVTQSNILINFDVKSLM*VSGNRT Trigger: GGTTCTGTTTCCAGAGACCAACATCAGACTTTTTAC...ATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR TCA 72 bp | TGCACGCACAGACCACGAGGTAGTTTAAATCACTACTaGAAACCAGTACACTTCCTCTGCTTCAGAGTGGTT | + |
Preference number: 3 (lower is better) Translates to: CTHRPRGSLNHY*KPVHFLCFRVV Trigger: AACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGTGATTTAAACTACCTCGTGGTCTGTGCGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
||
3UTR TCA 72 bp | ACTGTTCATCACAGCCATCTGCATGGTTTCATGCTGTaGCTGACAACAGGAATTCTTACATTCTACACCCGG | + |
Preference number: 3 (lower is better) Translates to: TVHHSHLHGFML*LTTGILTFYTR Trigger: CCGGGTGTAGAATGTAAGAATTCCTGTTGTCAGTCACAGCATGAAACCATGCAGATGGCTGTGATGAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR TCA 72 bp | ATCTCTGAGTTTATGAGTCCAGCTTGGTCTACAGAGTaGGTTCCAGGACAAGCAGGACTATACAGAGATACC | + |
Preference number: 3 (lower is better) Translates to: ISEFMSPAWSTE*VPGQAGLYRDT Trigger: GGTATCTCTGTATAGTCCTGCTTGTCCTGGAACTCACTCTGTAGACCAAGCTGGACTCATAAACTCAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR CCA 72 bp | GGCACAGTGGTTTCACAGGAAGCTTTATCCTGTCTCTaGTGGAACATCCCAAAACGTGTTAGTAATGTGTCT | + |
Preference number: 3 (lower is better) Translates to: GTVVSQEALSCL*WNIPKRVSNVS Trigger: AGACACATTACTAACACGTTTTGGGATGTTCCACCAGAGACAGGATAAAGCTTCCTGTGAAACCACTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
||
3UTR CCA 72 bp | TTCTATTTTTACCTGTTTCCCAGCCTGATGGCACAGTaGTTTCACAGGAAGCTTTATCCTGTCTCTGGTGGA | + |
Preference number: 3 (lower is better) Translates to: FYFYLFPSLMAQ*FHRKLYPVSGG Trigger: TCCACCAGAGACAGGATAAAGCTTCCTGTGAAACCACTGTGCCATCAGGCTGGGAAACAGGTAAAAATAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR-3UTR CAA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACTCCTTTCCATCATCCTaGATGAAGCTTGAACAGAAA | + |
Preference number: 3 (lower is better) Translates to: TTENQYTSSASEWLSLVHSFPSS*MKLEQK Trigger: TTTCTGTTCAAGCTTCATCAAGGATGATGGAAAGGA...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 72 bp | GACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTaGCTCTTCTCGCGGCAAGGAAAGTCTCTTCATAGT | + |
Preference number: 3 (lower is better) Translates to: DTGKATSIVLRV*LFSRQGKSLHS Trigger: ACTATGAAGAGACTTTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR TCA 72 bp | GTAATGTTCAAAACATCTCCTCTGTGCCTCTTTCACTaGGAGACCAGACTTTCAAGGCTTCCAGAGAATGTG | + |
Preference number: 3 (lower is better) Translates to: VMFKTSPLCLFH*ETRLSRLPENV Trigger: CACATTCTCTGGAAGCCTTGAAAGTCTGGTCTCTCAGTGAAAGAGGCACAGAGGAGATGTTTTGAACATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 72 bp | GATCACAGAACTTATGTTCCCAGCTATTGCTTCAACTaGTCAACTGACCCATTGGAAGATAAGCACTCATGG | + |
Preference number: 3 (lower is better) Translates to: DHRTYVPSYCFN*STDPLEDKHSW Trigger: CCATGAGTGCTTATCTTCCAATGGGTCAGTTGATCAGTTGAAGCAATAGCTGGGAACATAAGTTCTGTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR TCA 72 bp | TATTCCAATAGATCTCTGGAGCCAGGAAGATGGATCTaGTGTGGTTTGAGGAACTGGCTTCTATTTTTACCT | + |
Preference number: 3 (lower is better) Translates to: YSNRSLEPGRWI*CGLRNWLLFLP Trigger: AGGTAAAAATAGAAGCCAGTTCCTCAAACCACATCAGATCCATCTTCCTGGCTCCAGAGATCTATTGGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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3UTR CCA 72 bp | ACTCATTCATTTAATAAACATGGGGTCAGAAGCAGGTaGTCACCCAAAGCAACATCCTCATCAACTTTGATG | + |
Preference number: 3 (lower is better) Translates to: THSFNKHGVRSR*SPKATSSSTLM Trigger: CATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGTTTATTAAATGAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR TCA 72 bp | ACATCCCAAAACGTGTTAGTAATGTGTCTTAGACTTTaGACTGACCAAATAGAGGACAGTGAGTATGCTGTG | + |
Preference number: 3 (lower is better) Translates to: TSQNVLVMCLRL*TDQIEDSEYAV Trigger: CACAGCATACTCACTGTCCTCTATTTGGTCAGTTCAAAGTCTAAGACACATTACTAACACGTTTTGGGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR TCA 90 bp | CAGCCGAGGGGAGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTGACTGAGTTAGCCAGGCCTGTGTCCTaGGGCCACAGCCGGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: QPRGGPSPCSQSGDVTELARPVS*GHSRAP Trigger: AGGAGCCCGGCTGTGGCCTCAGGACACAGGCCTGGC...TAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCTCCCCTCGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR TCA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCGCCAGGCCTGTGTCCTaGGGCCACAGCCGGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: YNESSLVLPVGGWPALGLARPVS*GHSRAP Trigger: AGGAGCCCGGCTGTGGCCTCAGGACACAGGCCTGGC...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CAGCCGAGGGGAGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTGACTGAGTTACTCTTGCGCTCCTTCTaGGACTCCCTGCGGCCGCCT | + |
Preference number: 4 (lower is better) Translates to: QPRGGPSPCSQSGDVTELLLRSF*DSLRPP Trigger: AGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAG...TAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCTCCCCTCGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | GACCGTGCTATCAGCAGGCCAGGGGCTTCTCTTTTGTTTCTAGAGCTGGGCAGATTCTGGCCTGGCGGCTaGGGGCCCCCAGGGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: DRAISRPGASLLFLELGRFWPGG*GPPGLS Trigger: AGACAGCCCTGGGGGCCCGCAGCCGCCAGGCCAGAA...TCTGCCCAGCTCTAGAAACAAAAGAGAAGCCCCTGGCCTGCTGATAGCACGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCACGCCGCGAGGCTCTTaGGCTCCTTCTGCGACTCCC | + |
Preference number: 4 (lower is better) Translates to: YNESSLVLPVGGWPALGLTPRGS*APSATP Trigger: GGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGT...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTGGTGGTCTGTGTGACCCTGTGGACTAGGAAGACCCTGGATGTGTCCCAGCCCATCCCCAGGGGCGAATaGCACAGCCACCCATGCTGT | + |
Preference number: 4 (lower is better) Translates to: LVVCVTLWTRKTLDVSQPIPRGE*HSHPCC Trigger: ACAGCATGGGTGGCTGTGGCATTCGCCCCTGGGGAT...GGGCTGGGACACATCCAGGGTCTTCCTAGTCCACAGGGTCACACAGACCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | TCGCAGTCAGGAGATGTGACTGAGTTACAAGTCAGTCTGCTCAGAGTCCACAGTTTCTGGCCTGGCGGCTaGGGGCCCCCAGGGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: SQSGDVTELQVSLLRVHSFWPGG*GPPGLS Trigger: AGACAGCCCTGGGGGCCCGCAGCCGCCAGGCCAGAA...ACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | GACTTGAGTTTATATGCCCAACACTCAATCAAAAAGCTGACTGTGGCAGGGCACCAGCCGAACGTCTCCTaGATCGCGGCGCCCGCGGCG | + |
Preference number: 4 (lower is better) Translates to: DLSLYAQHSIKKLTVAGHQPNVS*IAAPAA Trigger: CGCCGCGGGCGCCGCGATGCAGGAGACGTTCGGCTG...GTGCCCTGCCACAGTCAGCTTTTTGATTGAGTGTTGGGCATATAAACTCAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | ATTATCCCTTACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTCCTTCTGCGACTCCCTaGGGCCGCCTGCGCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: IIPYKSLYLGKGPDLMGTPSATP*GRLRQA Trigger: GGCCTGGCGCAGGCGGCCGCAGGGAGTCGCAGAAGG...AGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTAAGGGATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | GGTAGAAGTAAGTCCTGCTGGATGCGGTGGCTCGCGCCTTTAGTCCCAACATTTGCTGATGGAAGCGGTTaGCCACGACGCAGCCGAACG | + |
Preference number: 4 (lower is better) Translates to: GRSKSCWMRWLAPLVPTFADGSG*PRRSRT Trigger: CGTTCGGCTGCGTCGTGGCCAACCGCTTCCATCAGC...AAATGTTGGGACTAAAGGCGCGAGCCACCGCATCCAGCAGGACTTACTTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | CAGCCGAGGGGAGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTGACTGAGTTATTGGGAGCAACATCTTaGGTCACCACTTCTGCACGG | + |
Preference number: 4 (lower is better) Translates to: QPRGGPSPCSQSGDVTELLGATS*VTTSAR Trigger: CCGTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAA...TAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCTCCCCTCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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3UTR CAA 72 bp | GAAGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTaGGGTCACCACTTCTGCACGGGGGCCATAGTTCTC | + |
Preference number: 4 (lower is better) Translates to: EVLRVIRVGSNI*GHHFCTGAIVL Trigger: GAGAACTATGGCCCCCGTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | ATTATCCCTTACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTGCTGTCTGGCTGCTGTaGGCCGGACGCCGCGAGGCT | + |
Preference number: 4 (lower is better) Translates to: IIPYKSLYLGKGPDLMGTAVWLL*AGRREA Trigger: AGCCTCGCGGCGTCCGGCGCACAGCAGCCAGACAGC...AGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTAAGGGATAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCGCGGCAAGGAAGCTGTCTGGCTGCTGTaGGCCGGACGCCGCGAGGCT | + |
Preference number: 4 (lower is better) Translates to: REKQHLLFLESDSSRGKEAVWLL*AGRREA Trigger: AGCCTCGCGGCGTCCGGCGCACAGCAGCCAGACAGC...TTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | ACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGATGACCGCCTCGGCCTCTaGTCCTCAGGCCTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: TWGQKQVVTQSNILINFDDRLGL*SSGLLW Trigger: CCAGAGGAGGCCTGAGGAGCAGAGGCCGAGGCGGTC...ATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | AAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCGCGGCAAGGAAAGTCTCCTCGGCCTCCCCGGGTaGTGCCTCTGGCTCCCCGAC | + |
Preference number: 4 (lower is better) Translates to: KQHLLFLESDSSRGKESLLGLPG*CLWLPD Trigger: GTCGGGGAGCCAGAGGCAGCACCCGGGGAGGCCGAG...GAGACTTTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR TCA 90 bp | TCTGGCTCCCCGACCAGGGCGAGGGAGGTTACCAAAGTTAATCTCCAGCTGGGACTGGCTTCCGAATATTaGACTCAGGCTTTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: SGSPTRAREVTKVNLQLGLASEY*TQALVW Trigger: CCAGACCAAAGCCTGAGTTCAATATTCGGAAGCCAG...TCCCAGCTGGAGATTAACTTTGGTAACCTCCCTCGCCCTGGTCGGGGAGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCAGCCGAACGTCTCCTaGATCGCGGCGCCCGCGGCG | + |
Preference number: 4 (lower is better) Translates to: LHTTREKQHLLFLESDSSQPNVS*IAAPAA Trigger: CGCCGCGGGCGCCGCGATGCAGGAGACGTTCGGCTG...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAACTGGGGCCCAGCCGAGTAGGACCTTCGCTCTaGTCTTTCAAGCACCACGTC | + |
Preference number: 4 (lower is better) Translates to: LKPPPEALRTTPELGPSRVGPSL*SFKHHV Trigger: GACGTGGTGCTTGAAAGAGCAGAGCGAAGGTCCTAC...TCGGCTGGGCCCCAGTTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCGACCGCCTCGGCCTCTaGTCCTCAGGCCTCCTCTGG | + |
Preference number: 4 (lower is better) Translates to: FLVLFFKTHSVDQAGLELDRLGL*SSGLLW Trigger: CCAGAGGAGGCCTGAGGAGCAGAGGCCGAGGCGGTC...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTGGCCTCCCCGGGTGCTaGCTCTGGCTCCCCGACCAG | + |
Preference number: 4 (lower is better) Translates to: LHTTREKQHLLFLESDSSGLPGC*LWLPDQ Trigger: CTGGTCGGGGAGCCAGAGGCAGCACCCGGGGAGGCC...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR GCA 90 bp | CTCAAGGACTTTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTCATCGCGACGCTTaGGCTGCAGCTGCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: LKDFSRLVFQDSLCRPGWPHRDA*AAAAAG Trigger: GCCAGCAGCAGCTGCAGCGCAAGCGTCGCGATGAGG...CCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAAAGTCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCCCTCATCGCGACGCTTaGGCTGCAGCTGCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: FLVLFFKTHSVDQAGLELPHRDA*AAAAAG Trigger: GCCAGCAGCAGCTGCAGCGCAAGCGTCGCGATGAGG...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | GAGGTGGTCCCTAACCTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAACTCAGGAACTTTGGCTaGAGACTCCTCGTCCAGGGC | + |
Preference number: 4 (lower is better) Translates to: EVVPNLKPPPEALRTTPELRNFG*RLLVQG Trigger: GCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAG...TTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAGGTTAGGGACCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACTCGTCCAGGGCGCCCTaGCACTCCTCCATCATCGAG | + |
Preference number: 4 (lower is better) Translates to: TTENQYTSSASEWLSLVHSSRAP*HSSIIE Trigger: CTCGATGATGGAGGAGTGCCAGGGCGCCCTGGACGA...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CAA 72 bp | TCTGACCGTGCTATCAGCAGGCCAGGGGCTTCTCTTTaGTTTCTAGAGCTGGGCAGAGGAAGCAGGGCTATT | + |
Preference number: 4 (lower is better) Translates to: SDRAISRPGASL*FLELGRGSRAI Trigger: AATAGCCCTGCTTCCTCTGCCCAGCTCTAGAAACAAAAGAGAAGCCCCTGGCCTGCTGATAGCACGGTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR TCA 90 bp | CTCAAGGACTTTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGTCGTCGTCCAGCAGCTaGTGGAAGCGGTTGGCCACG | + |
Preference number: 4 (lower is better) Translates to: LKDFSRLVFQDSLCRPGWSSSSS*WKRLAT Trigger: CGTGGCCAACCGCTTCCATCAGCTGCTGGACGACGA...CCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAAAGTCCTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR TCA 90 bp | CGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCGCGGCAAGGAATCGTCGTCCAGCAGCTaGTGGAAGCGGTTGGCCACG | + |
Preference number: 4 (lower is better) Translates to: REKQHLLFLESDSSRGKESSSSS*WKRLAT Trigger: CGTGGCCAACCGCTTCCATCAGCTGCTGGACGACGA...TTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | AGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCACCTTGTGAATCACCACTaGCTTGGAAGGAACTGTGGA | + |
Preference number: 4 (lower is better) Translates to: SPQGHPGWEQHLGSPLLHLVNHH*LGRNCG Trigger: TCCACAGTTCCTTCCAAGGCAGTGGTGATTCACAAG...GTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCGCTGATGGAAGCGGTTaGCCACGACGCAGCCGAACG | + |
Preference number: 4 (lower is better) Translates to: FLVLFFKTHSVDQAGLELADGSG*PRRSRT Trigger: CGTTCGGCTGCGTCGTGGCCAACCGCTTCCATCAGC...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CCTAGTGCACAATGTCTAAACCACAACTCAGGGATTTTCTCAGAATTGAGCAGTACGCCGCGAGGCTCTTaGGCTCCTTCTGCGACTCCC | + |
Preference number: 4 (lower is better) Translates to: PSAQCLNHNSGIFSELSSTPRGS*APSATP Trigger: GGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGT...ACTGCTCAATTCTGAGAAAATCCCTGAGTTGTGGTTTAGACATTGTGCACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTTTCCGGAAGACGTGAGACTCATCCTCATAGTCCTCCTTCACCATCTGAAAGACTCAGGAACTTTGGCTaGAGACTCCTCGTCCAGGGC | + |
Preference number: 4 (lower is better) Translates to: LSGRRETHPHSPPSPSERLRNFG*RLLVQG Trigger: GCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAG...TCTTTCAGATGGTGAAGGAGGACTATGAGGATGAGTCTCACGTCTTCCGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | GAGGTGGTCCCTAACCTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAATCGAGGTCTCTTCCATaGGTGCAGGTGGCTCTGTAT | + |
Preference number: 4 (lower is better) Translates to: EVVPNLKPPPEALRTTPESRSLP*VQVALY Trigger: ATACAGAGCCACCTGCACCCATGGAAGAGACCTCGA...TTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAGGTTAGGGACCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | AAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCGCGGCAAGGAAAGTCTCTCGTCCAGGGCGCCCTaGCACTCCTCCATCATCGAG | + |
Preference number: 4 (lower is better) Translates to: KQHLLFLESDSSRGKESLSSRAP*HSSIIE Trigger: CTCGATGATGGAGGAGTGCCAGGGCGCCCTGGACGA...GAGACTTTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | AGTCCTCAGGGTCATCCGGGTTGGGAGCAACATCTTGGGTCACCACTTCTGCACCATCGTCTCTGTATCTaGACTTGTGAATCACCACTG | + |
Preference number: 4 (lower is better) Translates to: SPQGHPGWEQHLGSPLLHHRLCI*TCESPL Trigger: CAGTGGTGATTCACAAGTCCAGATACAGAGACGATG...GTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAACCCGGATGACCCTGAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | TCGCAGTCAGGAGATGTGACTGAGTTACAAGTCAGTCTGCTCAGAGTCCACAGTTCATTCCATCCTTGCTaGTCCCCTCTTCGAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: SQSGDVTELQVSLLRVHSSFHPC*SPLRGV Trigger: GACTCCTCGAAGAGGGGAGCAGCAAGGATGGAATGA...ACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | AGGGAAGACGACTGTTCATCACAGCCATCTGCATGGTTTCATGCTGTGACTGACTCATTCCATCCTTGCTaGTCCCCTCTTCGAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: REDDCSSQPSAWFHAVTDSFHPC*SPLRGV Trigger: GACTCCTCGAAGAGGGGAGCAGCAAGGATGGAATGA...GTCAGTCACAGCATGAAACCATGCAGATGGCTGTGATGAACAGTCGTCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | GAGGTGGTCCCTAACCTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAATCCACGTCCTCTCAGTaGTCTGTCTCGATCAAACCT | + |
Preference number: 4 (lower is better) Translates to: EVVPNLKPPPEALRTTPESTSSQ*SVSIKP Trigger: AGGTTTGATCGAGACAGACCACTGAGAGGACGTGGA...TTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAGGTTAGGGACCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | TACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTCCACAGAGCGAATCACCACTGCCTTaGAAGGAACTGTGGACTCTG | + |
Preference number: 4 (lower is better) Translates to: YKSLYLGKGPDLMGTPQSESPLP*KELWTL Trigger: CAGAGTCCACAGTTCCTTCCAAGGCAGTGGTGATTC...GCTCTGTGGAGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | GAGGTGGTCCCTAACCTTAAACCTCCACCAGAGGCCTTAAGAACAACACCGGAAGAATCACCACTGCCTTaGAAGGAACTGTGGACTCTG | + |
Preference number: 4 (lower is better) Translates to: EVVPNLKPPPEALRTTPEESPLP*KELWTL Trigger: CAGAGTCCACAGTTCCTTCCAAGGCAGTGGTGATTC...TTCCGGTGTTGTTCTTAAGGCCTCTGGTGGAGGTTTAAGGTTAGGGACCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CAA 72 bp | TATAGCTGCAGCACCAGGGAGGCAAAGACAGTCTTCTaGGAGCTCACTAGCCAGTCTAGTTGCATTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: YSCSTREAKTVF*ELTSQSSCIGE Trigger: CTCACCAATGCAACTAGACTGGCTAGTGAGCTCCAAGAAGACTGTCTTTGCCTCCCTGGTGCTGCAGCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR TCA 90 bp | TCGCAGTCAGGAGATGTGACTGAGTTACAAGTCAGTCTGCTCAGAGTCCACAGTCTGGCTTCCGAATATTaGACTCAGGCTTTGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: SQSGDVTELQVSLLRVHSLASEY*TQALVW Trigger: CCAGACCAAAGCCTGAGTTCAATATTCGGAAGCCAG...ACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | ACTTCTGACTGCAAGTCAGGGAGTAATATCCAGCAGGGAAGACGACTGTTCATCGTAGGACCTTCGCTCTaGTCTTTCAAGCACCACGTC | + |
Preference number: 4 (lower is better) Translates to: TSDCKSGSNIQQGRRLFIVGPSL*SFKHHV Trigger: GACGTGGTGCTTGAAAGAGCAGAGCGAAGGTCCTAC...GATGAACAGTCGTCTTCCCTGCTGGATATTACTCCCTGACTTGCAGTCAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | AAACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGTGCCACAGCCACCCATaGTGTCCTCCATTCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: KHGVRSRWSPKATSSSTLCHSHP*CPPFCL Trigger: CAAACAGAATGGAGGACAGCATGGGTGGCTGTGGCA...CAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTATCCCCAGGGGCGAATaGCACAGCCACCCATGCTGT | + |
Preference number: 4 (lower is better) Translates to: LHTTREKQHLLFLESDSSIPRGE*HSHPCC Trigger: ACAGCATGGGTGGCTGTGGCATTCGCCCCTGGGGAT...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCCAGGGTCATCCGGGTTaGGAGCAACATCTTGGGTCA | + |
Preference number: 4 (lower is better) Translates to: FLVLFFKTHSVDQAGLELQGHPG*EQHLGS Trigger: TGACCCAAGATGTTGCTCCCAACCCGGATGACCCTG...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR TCA 90 bp | CGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCGCGGCAAGGAATCTCCAGCTGGGATGTaGTGTCATTGGCAGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: REKQHLLFLESDSSRGKESPAGM*CHWQLS Trigger: GGAAAGCTGCCAATGACATCACATCCCAGCTGGAGA...TTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR GCA 90 bp | AAACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGTTGTCATTCCATCCTTaGTGCTCCCCTCTTCGAGGA | + |
Preference number: 4 (lower is better) Translates to: KHGVRSRWSPKATSSSTLLSFHP*CSPLRG Trigger: TCCTCGAAGAGGGGAGCAGCAAGGATGGAATGACAA...CAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | ACTTCTGACTGCAAGTCAGGGAGTAATATCCAGCAGGGAAGACGACTGTTCATCTTGTCATTCCATCCTTaGTGCTCCCCTCTTCGAGGA | + |
Preference number: 4 (lower is better) Translates to: TSDCKSGSNIQQGRRLFILSFHP*CSPLRG Trigger: TCCTCGAAGAGGGGAGCAGCAAGGATGGAATGACAA...GATGAACAGTCGTCTTCCCTGCTGGATATTACTCCCTGACTTGCAGTCAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCTGCCACAGCCACCCATaGTGTCCTCCATTCTGTTTG | + |
Preference number: 4 (lower is better) Translates to: FLVLFFKTHSVDQAGLELCHSHP*CPPFCL Trigger: CAAACAGAATGGAGGACAGCATGGGTGGCTGTGGCA...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | CTCAAGGACTTTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGTCGAGGTCTCTTCCATaGGTGCAGGTGGCTCTGTAT | + |
Preference number: 4 (lower is better) Translates to: LKDFSRLVFQDSLCRPGWSRSLP*VQVALY Trigger: ATACAGAGCCACCTGCACCCATGGAAGAGACCTCGA...CCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAAAGTCCTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | TCGCAGTCAGGAGATGTGACTGAGTTACAAGTCAGTCTGCTCAGAGTCCACAGTCCTTGGAAGGAACTGTaGACTCTGGCTTCCGAATAT | + |
Preference number: 4 (lower is better) Translates to: SQSGDVTELQVSLLRVHSPWKEL*TLASEY Trigger: ATATTCGGAAGCCAGAGTCCACAGTTCCTTCCAAGG...ACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CAA 72 bp | AGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTaGATGACTCAACCAAACCCCAAGAGTTCAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: SRWSPKATSSST*MTQPNPKSSEG Trigger: TCCCTCTGAACTCTTGGGGTTTGGTTGAGTCATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR TCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTACTAGTGTCTTTACCTaGTCCCCAGGGGCGAATGCC | + |
Preference number: 4 (lower is better) Translates to: LHTTREKQHLLFLESDSSTSVFT*SPGANA Trigger: GGCATTCGCCCCTGGGGATCAGGTAAAGACACTAGT...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | GACTTGAGTTTATATGCCCAACACTCAATCAAAAAGCTGACTGTGGCAGGGCACGGTAAACTTCTCCACTaGCAAGTCAGCCTGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: DLSLYAQHSIKKLTVAGHGKLLH*QVSLSL Trigger: GAGAGACAGGCTGACTTGCCAGTGGAGAAGTTTACC...GTGCCCTGCCACAGTCAGCTTTTTGATTGAGTGTTGGGCATATAAACTCAAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | TACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTCCACAGAGCTCTCGTTTCCCTCTTTaGTCAAAGGAGTCAAAAGCT | + |
Preference number: 4 (lower is better) Translates to: YKSLYLGKGPDLMGTPQSSRFPL*SKESKA Trigger: AGCTTTTGACTCCTTTGACCAAAGAGGGAAACGAGA...GCTCTGTGGAGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | GGTGGTGGGGAGAGGAGAACAAGAATGCCAAATAGCAAGGTCCTATTTCCACACTCTCGTTTCCCTCTTTaGTCAAAGGAGTCAAAAGCT | + |
Preference number: 4 (lower is better) Translates to: GGGERRTRMPNSKVLFPHSRFPL*SKESKA Trigger: AGCTTTTGACTCCTTTGACCAAAGAGGGAAACGAGA...GTGTGGAAATAGGACCTTGCTATTTGGCATTCTTGTTCTCCTCTCCCCACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | CCTAGTGCACAATGTCTAAACCACAACTCAGGGATTTTCTCAGAATTGAGCAGTGGTAAACTTCTCCACTaGCAAGTCAGCCTGTCTCTC | + |
Preference number: 4 (lower is better) Translates to: PSAQCLNHNSGIFSELSSGKLLH*QVSLSL Trigger: GAGAGACAGGCTGACTTGCCAGTGGAGAAGTTTACC...ACTGCTCAATTCTGAGAAAATCCCTGAGTTGTGGTTTAGACATTGTGCACTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | AAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCGCGGCAAGGAAAGTCTCCCTTGGAAGGAACTGTaGACTCTGGCTTCCGAATAT | + |
Preference number: 4 (lower is better) Translates to: KQHLLFLESDSSRGKESLPWKEL*TLASEY Trigger: ATATTCGGAAGCCAGAGTCCACAGTTCCTTCCAAGG...GAGACTTTCCTTGCCGCGAGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CAA 72 bp | ATATCTCGGTTCAGGCATCTGGTAAAAAGTCTGATGTaGGTCTCTGGAAACAGAACCACGTTGGTAACGTGC | + |
Preference number: 4 (lower is better) Translates to: ISRFRHLVKSLM*VSGNRTTLVTC Trigger: GCACGTTACCAACGTGGTTCTGTTTCCAGAGACCAACATCAGACTTTTTACCAGATGCCTGAACCGAGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR GCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTCTTGTGAATCACCACTaGCTTGGAAGGAACTGTGGA | + |
Preference number: 4 (lower is better) Translates to: LHTTREKQHLLFLESDSSLVNHH*LGRNCG Trigger: TCCACAGTTCCTTCCAAGGCAGTGGTGATTCACAAG...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | ATTATCCCTTACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTTCTAAGGTCATCTCTTaGACTTGGTTTTCCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: IIPYKSLYLGKGPDLMGTSKVIS*TWFSSS Trigger: AGAAGAGGAAAACCAAGTCCAAGAGATGACCTTAGA...AGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTAAGGGATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CAA 72 bp | AACAGAACCACGTTGGTAACGTGCTTGCATAGGGACTaGAGTTTATATGCCCAACACTCAATCAAAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: NRTTLVTCLHRD*SLYAQHSIKKL Trigger: CAGCTTTTTGATTGAGTGTTGGGCATATAAACTCAAGTCCCTATGCAAGCACGTTACCAACGTGGTTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CCA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTTATCGTCTCTGTATCTaGACTTGTGAATCACCACTG | + |
Preference number: 4 (lower is better) Translates to: LHTTREKQHLLFLESDSSYRLCI*TCESPL Trigger: CAGTGGTGATTCACAAGTCCAGATACAGAGACGATA...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR CCA 90 bp | CCTAGTGCACAATGTCTAAACCACAACTCAGGGATTTTCTCAGAATTGAGCAGTAAGTTAATCTCCAGCTaGGATGTGATGTCATTGGCA | + |
Preference number: 4 (lower is better) Translates to: PSAQCLNHNSGIFSELSSKLISS*DVMSLA Trigger: TGCCAATGACATCACATCCCAGCTGGAGATTAACTT...ACTGCTCAATTCTGAGAAAATCCCTGAGTTGTGGTTTAGACATTGTGCACTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR CCA 90 bp | CCTAGTGCACAATGTCTAAACCACAACTCAGGGATTTTCTCAGAATTGAGCAGTTCTAAGGTCATCTCTTaGACTTGGTTTTCCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: PSAQCLNHNSGIFSELSSSKVIS*TWFSSS Trigger: AGAAGAGGAAAACCAAGTCCAAGAGATGACCTTAGA...ACTGCTCAATTCTGAGAAAATCCCTGAGTTGTGGTTTAGACATTGTGCACTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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3UTR CAA 72 bp | GTGGGCACCAAGTCTCTATTCCTGACAACCACAGGTTaGACATGTACTCCTCAAATACAAAATAAATGTTTT | + |
Preference number: 4 (lower is better) Translates to: VGTKSLFLTTTG*TCTPQIQNKCF Trigger: AAAACATTTATTTTGTATTTGAGGAGTACATGTCAAACCTGTGGTTGTCAGGAATAGAGACTTGGTGCCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS GCA 90 bp | CCGCTGGCCGCCGCCGCCGCCTCATCGCGACGCTTGCGCTGCAGCTaGTGCTGGCGCCGGTGCTCGGCCTCCCGCAGGATGTCGAACGGG | + |
Preference number: 5 (lower is better) Translates to: PLAAAAASSRRLRCS*CWRRCSASRRMSNG Trigger: CCCGTTCGACATCCTGCGGGAGGCCGAGCACCGGCGCCAGCAGCAGCTGCAGCGCAAGCGTCGCGATGAGGCGGCGGCGGCGGCCAGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | CCCCAGGGCTGTCTGGCTGCTGTGCGCCGGACGCCGCGAGGCTCTTaGGCTCCTTCTGCGACTCCCTGCGGCCGCCTGCGCCAGGCCTGT | + |
Preference number: 5 (lower is better) Translates to: PQGCLAAVRRTPRGS*APSATPCGRLRQAC Trigger: ACAGGCCTGGCGCAGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTCCGGCGCACAGCAGCCAGACAGCCCTGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | TCTGGCTGCTGTGCGCCGGACGCCGCGAGGCTCTTGCGCTCCTTCTaGGACTCCCTGCGGCCGCCTGCGCCAGGCCTGTGTCCTGAGGCC | + |
Preference number: 5 (lower is better) Translates to: SGCCAPDAARLLRSF*DSLRPPAPGLCPEA Trigger: GGCCTCAGGACACAGGCCTGGCGCAGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTCCGGCGCACAGCAGCCAGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | TACAATGAATCTTCCCTAGTTTTGCCGGTGGGTGGGTGGCCGGCCCTAGGTCTCGACGCCGCGAGGCTCTaGCGCTCCTTCTGCGACTCC | + |
Preference number: 5 (lower is better) Translates to: YNESSLVLPVGGWPALGLDAARL*RSFCDS Trigger: GGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTC...GAGACCTAGGGCCGGCCACCCACCCACCGGCAAAACTAGGGAAGATTCATTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | GCTCTTTCAAGCACCACGTCTGTCCCCCTGTTGTCATTCCATCCTTaGTGCTCCCCTCTTCGAGGAGTCCGCTTCTGGCCTGGCGGCTGC | + |
Preference number: 5 (lower is better) Translates to: ALSSTTSVPLLSFHP*CSPLRGVRFWPGGC Trigger: GCAGCCGCCAGGCCAGAAGCGGACTCCTCGAAGAGGGGAGCAGCAAGGATGGAATGACAACAGGGGGACAGACGTGGTGCTTGAAAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 90 bp | TCCAACTCAGGAACTTTGGCTGCAGACTCCTCGTCCAGGGCGCCCTaGCACTCCTCCATCATCGAGGTCTCTTCCATGGGTGCAGGTGGC | + |
Preference number: 5 (lower is better) Translates to: SNSGTLAADSSSRAP*HSSIIEVSSMGAGG Trigger: GCCACCTGCACCCATGGAAGAGACCTCGATGATGGAGGAGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | CAGCCGAGGGGAGGGCCCAGCCCATGTTCGCAGTCAGGAGATGTGACTGAGTTATCAGGGTCATCCGGGTaGGGAGCAACATCTTGGGTC | + |
Preference number: 5 (lower is better) Translates to: QPRGGPSPCSQSGDVTELSGSSG*GATSWV Trigger: GACCCAAGATGTTGCTCCCAACCCGGATGACCCTGA...TAACTCAGTCACATCTCCTGACTGCGAACATGGGCTGGGCCCTCCCCTCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS TCA 90 bp | CTCTTCCATGGGTGCAGGTGGCTCTGTATCACTAGTGTCTTTACCTaGTCCCCAGGGGCGAATGCCACAGCCACCCATGCTGTCCTCCAT | + |
Preference number: 5 (lower is better) Translates to: LFHGCRWLCITSVFT*SPGANATATHAVLH Trigger: ATGGAGGACAGCATGGGTGGCTGTGGCATTCGCCCCTGGGGATCAGGTAAAGACACTAGTGATACAGAGCCACCTGCACCCATGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | AAACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGGACGCCGCGAGGCTCTaGCGCTCCTTCTGCGACTCC | + |
Preference number: 5 (lower is better) Translates to: KHGVRSRWSPKATSSSTLDAARL*RSFCDS Trigger: GGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTC...CAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | TTGGACTTGGTTTTCCTCTTCTACCTCCAACTCAGGAACTTTGGCTaGAGACTCCTCGTCCAGGGCGCCCTGGCACTCCTCCATCATCGA | + |
Preference number: 5 (lower is better) Translates to: LDLVFLFYLQLRNFG*RLLVQGALALLHHR Trigger: TCGATGATGGAGGAGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGAGGTAGAAGAGGAAAACCAAGTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 90 bp | TCTCTTGGACTTGGTTTTCCTCTTCTACCTCCAACTCAGGAACTTTaGCTGCAGACTCCTCGTCCAGGGCGCCCTGGCACTCCTCCATCA | + |
Preference number: 5 (lower is better) Translates to: SLGLGFPLLPPTQEL*LQTPRPGRPGTPPS Trigger: TGATGGAGGAGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGAGGTAGAAGAGGAAAACCAAGTCCAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | TCTCTCAGTCTCATAGGGCCGGTATTCCCTGTAGGACCTTCGCTCTaGTCTTTCAAGCACCACGTCTGTCCCCCTGTTGTCATTCCATCC | + |
Preference number: 5 (lower is better) Translates to: SLSLIGPVFPVGPSL*SFKHHVCPPVVIPS Trigger: GGATGGAATGACAACAGGGGGACAGACGTGGTGCTTGAAAGAGCAGAGCGAAGGTCCTACAGGGAATACCGGCCCTATGAGACTGAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | CTGGTGGTCTGTGTGACCCTGTGGACTAGGAAGACCCTGGATGTGTCCCAGCCCAGGCTTTGGTCTGGTTaGTTCTTGAAGGTTTTTCCA | + |
Preference number: 5 (lower is better) Translates to: LVVCVTLWTRKTLDVSQPRLWSG*FLKVFP Trigger: TGGAAAAACCTTCAAGAACAAACCAGACCAAAGCCT...GGGCTGGGACACATCCAGGGTCTTCCTAGTCCACAGGGTCACACAGACCACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS CCA 90 bp | GCCTCCACGTCCTCTCAGTGGTCTGTCTCGATCAAACCTGTCAACTaGTTTTTCATCGGTAAACTTCTCCACTGGCAAGTCAGCCTGTCT | + |
Preference number: 5 (lower is better) Translates to: ASTSSQWSVSIKPVN*FFIGKLLHWQVSLS Trigger: AGACAGGCTGACTTGCCAGTGGAGAAGTTTACCGATGAAAAACCAGTTGACAGGTTTGATCGAGACAGACCACTGAGAGGACGTGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACGTTGTCATTCCATCCTaGCTGCTCCCCTCTTCGAGG | + |
Preference number: 5 (lower is better) Translates to: TTENQYTSSASEWLSLVHVVIPS*LLPSSR Trigger: CCTCGAAGAGGGGAGCAGCAAGGATGGAATGACAAC...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | ACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGATGTTGGGAGCAACATCTaGGGTCACCACTTCTGCACG | + |
Preference number: 5 (lower is better) Translates to: TWGQKQVVTQSNILINFDVGSNI*GHHFCT Trigger: CGTGCAGAAGTGGTGACCCAAGATGTTGCTCCCAAC...ATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR CAA 90 bp | TTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGCCTTGAACTCACGTCTGTCCCCCTGTaGTCATTCCATCCTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: FLVLFFKTHSVDQAGLELTSVPL*SFHPCC Trigger: GCAGCAAGGATGGAATGACAACAGGGGGACAGACGT...GAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | ACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGATTGGGATGTGATGTCATaGGCAGCTTTCCGGAAGACG | + |
Preference number: 5 (lower is better) Translates to: TWGQKQVVTQSNILINFDWDVMS*AAFRKT Trigger: CGTCTTCCGGAAAGCTGCCAATGACATCACATCCCA...ATCAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS CCA 90 bp | TCGATCAAACCTGTCAACTGGTTTTTCATCGGTAAACTTCTCCACTaGCAAGTCAGCCTGTCTCTCAGTCTCATAGGGCCGGTATTCCCT | + |
Preference number: 5 (lower is better) Translates to: SIKPVNWFFIGKLLH*QVSLSLSLIGPVFP Trigger: AGGGAATACCGGCCCTATGAGACTGAGAGACAGGCTGACTTGCCAGTGGAGAAGTTTACCGATGAAAAACCAGTTGACAGGTTTGATCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | TCGCAGTCAGGAGATGTGACTGAGTTACAAGTCAGTCTGCTCAGAGTCCACAGTGGTCATCTCTTGGACTaGGTTTTCCTCTTCTACCTC | + |
Preference number: 5 (lower is better) Translates to: SQSGDVTELQVSLLRVHSGHLLD*VFLFYL Trigger: GAGGTAGAAGAGGAAAACCAAGTCCAAGAGATGACC...ACTGTGGACTCTGAGCAGACTGACTTGTAACTCAGTCACATCTCCTGACTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | CTCCTTCACCATATCGTCTCTGTATCTGGACTTGTGAATCACCACTaGCTTGGAAGGAACTGTGGACTCTGGCTTCCGAATATTGAACTC | + |
Preference number: 5 (lower is better) Translates to: LLHHIVSVSGLVNHH*LGRNCGLWLPNIEL Trigger: GAGTTCAATATTCGGAAGCCAGAGTCCACAGTTCCTTCCAAGGCAGTGGTGATTCACAAGTCCAGATACAGAGACGATATGGTGAAGGAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS-3UTR CAA 90 bp | CTTCACACGACACGGGAAAAGCAACATCTATTGTTCTTAGAGTCTGACTCTTCTGTTGTCATTCCATCCTaGCTGCTCCCCTCTTCGAGG | + |
Preference number: 5 (lower is better) Translates to: LHTTREKQHLLFLESDSSVVIPS*LLPSSR Trigger: CCTCGAAGAGGGGAGCAGCAAGGATGGAATGACAAC...AGAAGAGTCAGACTCTAAGAACAATAGATGTTGCTTTTCCCGTGTCGTGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | AAACATGGGGTCAGAAGCAGGTGGTCACCCAAAGCAACATCCTCATCAACTTTGGTCTCGTTTCCCTCTTaGGTCAAAGGAGTCAAAAGC | + |
Preference number: 5 (lower is better) Translates to: KHGVRSRWSPKATSSSTLVSFPS*VKGVKS Trigger: GCTTTTGACTCCTTTGACCAAAGAGGGAAACGAGAC...CAAAGTTGATGAGGATGTTGCTTTGGGTGACCACCTGCTTCTGACCCCATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | CTTTCCGGAAGACGTGAGACTCATCCTCATAGTCCTCCTTCACCATCTGAAAGAGTCTCGTTTCCCTCTTaGGTCAAAGGAGTCAAAAGC | + |
Preference number: 5 (lower is better) Translates to: LSGRRETHPHSPPSPSERVSFPS*VKGVKS Trigger: GCTTTTGACTCCTTTGACCAAAGAGGGAAACGAGAC...TCTTTCAGATGGTGAAGGAGGACTATGAGGATGAGTCTCACGTCTTCCGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS GCA 90 bp | AGACAAGCTTACATCGTCTCTGTATCTGGACTTGTGAATCACCACTaGCTTGGAAGGAACTGTGGACTCTGGCTTCCGAATATTGAACTC | + |
Preference number: 5 (lower is better) Translates to: RQAYIVSVSGLVNHH*LGRNCGLWLPNIEL Trigger: GAGTTCAATATTCGGAAGCCAGAGTCCACAGTTCCTTCCAAGGCAGTGGTGATTCACAAGTCCAGATACAGAGACGATGTAAGCTTGTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | CTCAAGGACTTTTCTCGTCTTGTTTTTCAAGACTCACTCTGTAGACCAGGCTGGTCTGGCTTCCGAATATaGAACTCAGGCTTTGGTCTG | + |
Preference number: 5 (lower is better) Translates to: LKDFSRLVFQDSLCRPGWSGFRI*NSGFGL Trigger: CAGACCAAAGCCTGAGTTCAATATTCGGAAGCCAGA...CCAGCCTGGTCTACAGAGTGAGTCTTGAAAAACAAGACGAGAAAAGTCCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 90 bp | TGCCACAGCCACCCATGCTGTCCTCCATTCTGTTTGTTTTATCATTaGTACTGTATCTCTCAAAGTCTCGTTTCCCTCTTTGGTCAAAGG | + |
Preference number: 5 (lower is better) Translates to: CHSHPCCPPFCLFYH*YCISQSLVSLFGQR Trigger: CCTTTGACCAAAGAGGGAAACGAGACTTTGAGAGATACAGTAGCAATGATAAAACAAACAGAATGGAGGACAGCATGGGTGGCTGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | ACACCCGGGTGCTTCAGAGTTCCTTTAACTTCAGCAACAAACAAACAAATGCAAGGTCATCTCTTGGACTaGGTTTTCCTCTTCTACCTC | + |
Preference number: 5 (lower is better) Translates to: TPGCFRVPLTSATNKQMQGHLLD*VFLFYL Trigger: GAGGTAGAAGAGGAAAACCAAGTCCAAGAGATGACC...TTGCATTTGTTTGTTTGTTGCTGAAGTTAAAGGAACTCTGAAGCACCCGGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | ATTATCCCTTACAAAAGTCTCTATCTGGGGAAAGGGCCTGACCTCATGGGAACTAGGCTTTGGTCTGGTTaGTTCTTGAAGGTTTTTCCA | + |
Preference number: 5 (lower is better) Translates to: IIPYKSLYLGKGPDLMGTRLWSG*FLKVFP Trigger: TGGAAAAACCTTCAAGAACAAACCAGACCAAAGCCT...AGTTCCCATGAGGTCAGGCCCTTTCCCCAGATAGAGACTTTTGTAAGGGATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | AAGCTCGGTGACTCAGCTAACTTGGTTACCTCAAATATTCCAATAGATCTCTGGTCTGGCTTCCGAATATaGAACTCAGGCTTTGGTCTG | + |
Preference number: 5 (lower is better) Translates to: KLGDSANLVTSNIPIDLWSGFRI*NSGFGL Trigger: CAGACCAAAGCCTGAGTTCAATATTCGGAAGCCAGA...CCAGAGATCTATTGGAATATTTGAGGTAACCAAGTTAGCTGAGTCACCGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | ACTACTGAAAACCAGTACACTTCCTCTGCTTCAGAGTGGTTGTCCCTAGTGCACTGTCCTCCATTCTGTTaGTTTTATCATTGCTACTGT | + |
Preference number: 5 (lower is better) Translates to: TTENQYTSSASEWLSLVHCPPFC*FYHCYC Trigger: ACAGTAGCAATGATAAAACAAACAGAATGGAGGACA...GTGCACTAGGGACAACCACTCTGAAGCAGAGGAAGTGTACTGGTTTTCAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS-3UTR CAA 90 bp | CTTTCCGGAAGACGTGAGACTCATCCTCATAGTCCTCCTTCACCATCTGAAAGATGTCCTCCATTCTGTTaGTTTTATCATTGCTACTGT | + |
Preference number: 5 (lower is better) Translates to: LSGRRETHPHSPPSPSERCPPFC*FYHCYC Trigger: ACAGTAGCAATGATAAAACAAACAGAATGGAGGACA...TCTTTCAGATGGTGAAGGAGGACTATGAGGATGAGTCTCACGTCTTCCGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS GCA 72 bp | CTGGCCGCCGCCGCCGCCTCATCGCGACGCTTGCGCTaGAGCTGCTGCTGGCGCCGGTGCTCGGCCTCCCGC | + |
Preference number: 6 (lower is better) Translates to: LAAAAASSRRLR*SCCWRRCSASR Trigger: GCGGGAGGCCGAGCACCGGCGCCAGCAGCAGCTGCAGCGCAAGCGTCGCGATGAGGCGGCGGCGGCGGCCAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 90 bp | CCCCCAGGGCTGTCTGGCTGCTGTGCGCCGGACGCCGCGAGGCTCTaGCGCTCCTTCTGCGACTCCCTGCGGCCGCCTGCGCCAGGCCTG | + |
Preference number: 6 (lower is better) Translates to: PPGLSGCCAPDAARL*RSFCDSLRPPAPGL Trigger: CAGGCCTGGCGCAGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTCCGGCGCACAGCAGCCAGACAGCCCTGGGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | TGGAAGCGGTTGGCCACGACGCAGCCGAACGTCTCCTaGATCGCGGCGCCCGCGGCGGCTACAGGGCTCCCC | + |
Preference number: 6 (lower is better) Translates to: WKRLATTQPNVS*IAAPAAATGLP Trigger: GGGGAGCCCTGTAGCCGCCGCGGGCGCCGCGATGCAGGAGACGTTCGGCTGCGTCGTGGCCAACCGCTTCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | TGTGCGCCGGACGCCGCGAGGCTCTTGCGCTCCTTCTaGGACTCCCTGCGGCCGCCTGCGCCAGGCCTGTGT | + |
Preference number: 6 (lower is better) Translates to: CAPDAARLLRSF*DSLRPPAPGLC Trigger: ACACAGGCCTGGCGCAGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTCCGGCGCACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | TGTCTGGCTGCTGTGCGCCGGACGCCGCGAGGCTCTTaGGCTCCTTCTGCGACTCCCTGCGGCCGCCTGCGC | + |
Preference number: 6 (lower is better) Translates to: CLAAVRRTPRGS*APSATPCGRLR Trigger: GCGCAGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTCCGGCGCACAGCAGCCAGACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 72 bp | CTGTCTGGCTGCTGTGCGCCGGACGCCGCGAGGCTCTaGCGCTCCTTCTGCGACTCCCTGCGGCCGCCTGCG | + |
Preference number: 6 (lower is better) Translates to: LSGCCAPDAARL*RSFCDSLRPPA Trigger: CGCAGGCGGCCGCAGGGAGTCGCAGAAGGAGCGCAAGAGCCTCGCGGCGTCCGGCGCACAGCAGCCAGACAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 72 bp | GCCGCCTCATCGCGACGCTTGCGCTGCAGCTGCTGCTaGCGCCGGTGCTCGGCCTCCCGCAGGATGTCGAAC | + |
Preference number: 6 (lower is better) Translates to: AASSRRLRCSCC*RRCSASRRMSN Trigger: GTTCGACATCCTGCGGGAGGCCGAGCACCGGCGCCAGCAGCAGCTGCAGCGCAAGCGTCGCGATGAGGCGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 72 bp | GGAACTTTGGCTGCAGACTCCTCGTCCAGGGCGCCCTaGCACTCCTCCATCATCGAGGTCTCTTCCATGGGT | + |
Preference number: 6 (lower is better) Translates to: GTLAADSSSRAP*HSSIIEVSSMG Trigger: ACCCATGGAAGAGACCTCGATGATGGAGGAGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | AGCACCACGTCTGTCCCCCTGTTGTCATTCCATCCTTaGTGCTCCCCTCTTCGAGGAGTCCGCTTCTGGCCT | + |
Preference number: 6 (lower is better) Translates to: STTSVPLLSFHP*CSPLRGVRFWP Trigger: AGGCCAGAAGCGGACTCCTCGAAGAGGGGAGCAGCAAGGATGGAATGACAACAGGGGGACAGACGTGGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS TCA 72 bp | GGGTGCAGGTGGCTCTGTATCACTAGTGTCTTTACCTaGTCCCCAGGGGCGAATGCCACAGCCACCCATGCT | + |
Preference number: 6 (lower is better) Translates to: GCRWLCITSVFT*SPGANATATHA Trigger: AGCATGGGTGGCTGTGGCATTCGCCCCTGGGGATCAGGTAAAGACACTAGTGATACAGAGCCACCTGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | GTTTTCCTCTTCTACCTCCAACTCAGGAACTTTGGCTaGAGACTCCTCGTCCAGGGCGCCCTGGCACTCCTC | + |
Preference number: 6 (lower is better) Translates to: VFLFYLQLRNFG*RLLVQGALALL Trigger: GAGGAGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGAGGTAGAAGAGGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | CTCATAGGGCCGGTATTCCCTGTAGGACCTTCGCTCTaGTCTTTCAAGCACCACGTCTGTCCCCCTGTTGTC | + |
Preference number: 6 (lower is better) Translates to: LIGPVFPVGPSL*SFKHHVCPPVV Trigger: GACAACAGGGGGACAGACGTGGTGCTTGAAAGAGCAGAGCGAAGGTCCTACAGGGAATACCGGCCCTATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 72 bp | CTTGGTTTTCCTCTTCTACCTCCAACTCAGGAACTTTaGCTGCAGACTCCTCGTCCAGGGCGCCCTGGCACT | + |
Preference number: 6 (lower is better) Translates to: LGFPLLPPTQEL*LQTPRPGRPGT Trigger: AGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGAGGTAGAAGAGGAAAACCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 72 bp | ACTTGGTTTTCCTCTTCTACCTCCAACTCAGGAACTTaGGCTGCAGACTCCTCGTCCAGGGCGCCCTGGCAC | + |
Preference number: 6 (lower is better) Translates to: TWFSSSTSNSGT*AADSSSRAPWH Trigger: GTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGAGGTAGAAGAGGAAAACCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 90 bp | ATCTCTTGGACTTGGTTTTCCTCTTCTACCTCCAACTCAGGAACTTaGGCTGCAGACTCCTCGTCCAGGGCGCCCTGGCACTCCTCCATC | + |
Preference number: 6 (lower is better) Translates to: ISWTWFSSSTSNSGT*AADSSSRAPWHSSI Trigger: GATGGAGGAGTGCCAGGGCGCCCTGGACGAGGAGTCTGCAGCCAAAGTTCCTGAGTTGGAGGTAGAAGAGGAAAACCAAGTCCAAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 72 bp | CCTGTCAACTGGTTTTTCATCGGTAAACTTCTCCACTaGCAAGTCAGCCTGTCTCTCAGTCTCATAGGGCCG | + |
Preference number: 6 (lower is better) Translates to: PVNWFFIGKLLH*QVSLSLSLIGP Trigger: CGGCCCTATGAGACTGAGAGACAGGCTGACTTGCCAGTGGAGAAGTTTACCGATGAAAAACCAGTTGACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 90 bp | CCCAGGGGCGAATGCCACAGCCACCCATGCTGTCCTCCATTCTGTTaGTTTTATCATTGCTACTGTATCTCTCAAAGTCTCGTTTCCCTC | + |
Preference number: 6 (lower is better) Translates to: PRGECHSHPCCPPFC*FYHCYCISQSLVSL Trigger: GAGGGAAACGAGACTTTGAGAGATACAGTAGCAATGATAAAACAAACAGAATGGAGGACAGCATGGGTGGCTGTGGCATTCGCCCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS GCA 72 bp | CATATCGTCTCTGTATCTGGACTTGTGAATCACCACTaGCTTGGAAGGAACTGTGGACTCTGGCTTCCGAAT | + |
Preference number: 6 (lower is better) Translates to: HIVSVSGLVNHH*LGRNCGLWLPN Trigger: ATTCGGAAGCCAGAGTCCACAGTTCCTTCCAAGGCAGTGGTGATTCACAAGTCCAGATACAGAGACGATATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS GCA 72 bp | TACATCGTCTCTGTATCTGGACTTGTGAATCACCACTaGCTTGGAAGGAACTGTGGACTCTGGCTTCCGAAT | + |
Preference number: 6 (lower is better) Translates to: YIVSVSGLVNHH*LGRNCGLWLPN Trigger: ATTCGGAAGCCAGAGTCCACAGTTCCTTCCAAGGCAGTGGTGATTCACAAGTCCAGATACAGAGACGATGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221904.2 |
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CDS CCA 72 bp | CCTCATAGTCCTCCTTCACCATATCGTCTCTGTATCTaGACTTGTGAATCACCACTGCCTTGGAAGGAACTG | + |
Preference number: 6 (lower is better) Translates to: PHSPPSPYRLCI*TCESPLPWKEL Trigger: CAGTTCCTTCCAAGGCAGTGGTGATTCACAAGTCCAGATACAGAGACGATATGGTGAAGGAGGACTATGAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021929.10 |
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CDS CCA 72 bp | TCCTCTCAGTGGTCTGTCTCGATCAAACCTGTCAACTaGTTTTTCATCGGTAAACTTCTCCACTGGCAAGTC | + |
Preference number: 6 (lower is better) Translates to: SSQWSVSIKPVN*FFIGKLLHWQV Trigger: GACTTGCCAGTGGAGAAGTTTACCGATGAAAAACCAGTTGACAGGTTTGATCGAGACAGACCACTGAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CCA 72 bp | TTGCTACTGTATCTCTCAAAGTCTCGTTTCCCTCTTTaGTCAAAGGAGTCAAAAGCTCTGTTCCCAGGACCG | + |
Preference number: 6 (lower is better) Translates to: LLLYLSKSRFPL*SKESKALFPGP Trigger: CGGTCCTGGGAACAGAGCTTTTGACTCCTTTGACCAAAGAGGGAAACGAGACTTTGAGAGATACAGTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 72 bp | ATTGCTACTGTATCTCTCAAAGTCTCGTTTCCCTCTTaGGTCAAAGGAGTCAAAAGCTCTGTTCCCAGGACC | + |
Preference number: 6 (lower is better) Translates to: IATVSLKVSFPS*VKGVKSSVPRT Trigger: GGTCCTGGGAACAGAGCTTTTGACTCCTTTGACCAAAGAGGGAAACGAGACTTTGAGAGATACAGTAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 90 bp | ATGCCACAGCCACCCATGCTGTCCTCCATTCTGTTTGTTTTATCATaGCTACTGTATCTCTCAAAGTCTCGTTTCCCTCTTTGGTCAAAG | + |
Preference number: 6 (lower is better) Translates to: MPQPPMLSSILFVLS*LLYLSKSRFPLWSK Trigger: CTTTGACCAAAGAGGGAAACGAGACTTTGAGAGATACAGTAGCAATGATAAAACAAACAGAATGGAGGACAGCATGGGTGGCTGTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 72 bp | GAATGCCACAGCCACCCATGCTGTCCTCCATTCTGTTaGTTTTATCATTGCTACTGTATCTCTCAAAGTCTC | + |
Preference number: 6 (lower is better) Translates to: ECHSHPCCPPFC*FYHCYCISQSL Trigger: GAGACTTTGAGAGATACAGTAGCAATGATAAAACAAACAGAATGGAGGACAGCATGGGTGGCTGTGGCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |
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CDS CAA 72 bp | CCACCCATGCTGTCCTCCATTCTGTTTGTTTTATCATaGCTACTGTATCTCTCAAAGTCTCGTTTCCCTCTT | + |
Preference number: 6 (lower is better) Translates to: PPMLSSILFVLS*LLYLSKSRFPL Trigger: AAGAGGGAAACGAGACTTTGAGAGATACAGTAGCAATGATAAAACAAACAGAATGGAGGACAGCATGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021929.10 ENSMUST00000221904.2 |