Pregenerated sensors for HABP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025075Ensembl transcript IDs: ENSMUST00000078284.13, ENSMUST00000095948.11, ENSMUST00000163502.8, ENSMUST00000165522.2, ENSMUST00000166049.8, ENSMUST00000171341.8
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAACGGGGTTTCCTGTGAACTCAGTGGAGGTGGGGCGCTATGTGTaGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCGGCGCTAGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: ATGFPVNSVEVGRYV*LPQVEPEAAAALGD Trigger: ATCTCCTAGCGCCGCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCACTGAGTTCACAGGAAACCCCGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR TCA 90 bp | AGAAGCGTGAAAGGCAGCCGAACAAGGCGCCTAATTTCATGGGTCTaGGATGACCGGGCGGATGACACCTGGGTTAAACTTCCCGCGGGC | + |
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Preference number: 1 (lower is better) Translates to: RSVKGSRTRRLISWV*DDRADDTWVKLPAG Trigger: GCCCGCGGGAAGTTTAACCCAGGTGTCATCCGCCCGGTCATCTCAGACCCATGAAATTAGGCGCCTTGTTCGGCTGCCTTTCACGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR TCA 90 bp | CAAGAAGAAGACTCTGCTGATGTGAGCCTCCTTAAGAAGCCCCCTTaGGGGCTGCTTGCCAAAGGCATGCCTCTGTGGCTTTGGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QEEDSADVSLLKKPP*GLLAKGMPLWLWSG Trigger: TCCAGACCAAAGCCACAGAGGCATGCCTTTGGCAAGCAGCCCTCAAGGGGGCTTCTTAAGGAGGCTCACATCAGCAGAGTCTTCTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR CCA 90 bp | CCTGGTGCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTaGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTC | + |
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Preference number: 1 (lower is better) Translates to: PGAGQAGISDSQSPW*RTSLNSGYLEGTLV Trigger: GACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR GCA 90 bp | AAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTaGATGAGAATGGCTGGTTCTGTGGAGGACCCTGATGGTATGGAC | + |
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Preference number: 1 (lower is better) Translates to: KQTKSLWFWGLLSDG*MRMAGSVEDPDGMD Trigger: GTCCATACCATCAGGGTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CCA 90 bp | TCTCCTGGTGCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATaGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTT | + |
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Preference number: 1 (lower is better) Translates to: SPGAGQAGISDSQSP*WRTSLNSGYLEGTL Trigger: AAGTGTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGCACCAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR TCA 90 bp | AAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCATaGAATGATATAGTGCCAGTCTGGAAAGGCCCAGGCTGGGCAACA | + |
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Preference number: 1 (lower is better) Translates to: KDNVFLVGSQREKAS*NDIVPVWKGPGWAT Trigger: TGTTGCCCAGCCTGGGCCTTTCCAGACTGGCACTATATCATTTCATGAGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGGTGGGGCGCTATGTGTGGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCGGAATGGCTGGTTCTGTaGAGGACCCTGATGGTATGG | + |
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Preference number: 2 (lower is better) Translates to: VEVGRYVWLPQVEPEAAAEWLVL*RTLMVW Trigger: CCATACCATCAGGGTCCTCCACAGAACCAGCCATTC...CGCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGCAGAGGCAAACCTACCAGGGCGACATCAATCCCGGGCCAGGGCAGCCCGGCACACCCTCCCCGTaGCCACATCTGCCTTTATTA | + |
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Preference number: 2 (lower is better) Translates to: VLQRQTYQGDINPGPGQPGTPSP*PHLPLL Trigger: TAATAAAGGCAGATGTGGGCACGGGGAGGGTGTGCC...GGGCTGCCCTGGCCCGGGATTGATGTCGCCCTGGTAGGTTTGCCTCTGCAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTGCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGCAGGCTGGGCAACAATaGCTCTGTCTAGAGCATGGA | + |
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Preference number: 2 (lower is better) Translates to: PGAGQAGISDSQSPWWRTQAGQQ*LCLEHG Trigger: TCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG...CGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGCACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR-3UTR CCA 90 bp | AGTCACCCTGGCAGGTGTCTGATCCGGGCTTCTGAAGGTTCCCCGCACAAATCATTAGCATCCAGGAGCTaGCGGGACCCTTCCCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SHPGRCLIRASEGSPHKSLASRS*RDPSPV Trigger: AACAGGGGAAGGGTCCCGCCAGCTCCTGGATGCTAA...TGATTTGTGCGGGGAACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTCCCACATTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCACCCTGGCAGGTGTCTaGTCCGGGCTTCTGAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLPTFLAPAYNPVDVVSSTLAGV*SGLLKV Trigger: AACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGT...GGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAATGTGGGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTTCTCATCTCTGCCTTGAGGATCCTTTTTCTTGGACCGGGGTGGAAGAGGGAAACATCTCCTGGTaGGGGGCAAGCAGGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: LPSHLCLEDPFSWTGVEEGNISW*GASRDL Trigger: GAGATCCCTGCTTGCCCCGCACCAGGAGATGTTTCC...CTCTTCCACCCCGGTCCAAGAAAAAGGATCCTCAAGGCAGAGATGAGAAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGGAGGACCCTGATGGTCAGGCTGGGCAACAATaGCTCTGTCTAGAGCATGGA | + |
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Preference number: 2 (lower is better) Translates to: LLSDGCMRMAGSVEDPDGQAGQQ*LCLEHG Trigger: TCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG...ACCATCAGGGTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGAAAGGCCCAGGCTaGGCAACAATGCCTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ASRDLRFAVSMVENVSEFWKGPG*ATMPLS Trigger: AGACAGAGGCATTGTTGCCCAGCCTGGGCCTTTCCA...GAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CAA 90 bp | TGTGCTGACTGCTTGCTCGTTACATTCGCGGAAAGGGTCAGGGACTaGCTGGCTCCAGCAGTCTGCATTTTGAACCCTACTTTGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: CADCLLVTFAERVRD*LAPAVCILNPTLFR Trigger: CCTGAACAAAGTAGGGTTCAAAATGCAGACTGCTGGAGCCAGCAAGTCCCTGACCCTTTCCGCGAATGTAACGAGCAAGCAGTCAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTTCTCATCTCTGCCTTGAGGATCCTTTTTCTTGGACCGGGGTGGAAGAGCTTCTCTCTGATGGCTaGATGAGAATGGCTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPSHLCLEDPFSWTGVEELLSDG*MRMAGS Trigger: AGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAG...CTCTTCCACCCCGGTCCAAGAAAAAGGATCCTCAAGGCAGAGATGAGAAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGGATATAGTGCCAGTCTaGAAAGGCCCAGGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLVRTGAKIMYFLLVPREDIVPV*KGPGWA Trigger: TGCCCAGCCTGGGCCTTTCCAGACTGGCACTATATC...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CAA 90 bp | GTCAGGGACTTGCTGGCTCCAGCAGTCTGCATTTTGAACCCTACTTaGTTCAGGAGAGAGACAGCACATCTAAATGAGAAGCAGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VRDLLAPAVCILNPT*FRRETAHLNEKQVL Trigger: CAAAACCTGCTTCTCATTTAGATGTGCTGTCTCTCTCCTGAACAAAGTAGGGTTCAAAATGCAGACTGCTGGAGCCAGCAAGTCCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAAAGAAGCGTGAAAGGCAGCCGAACAAGGCGCCTAATTTCATGGGTCTGTTCTGTGGAGGACCCTaGTGGTATGGACAAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: VLKKRERQPNKAPNFMGLFCGGP*WYGQKI Trigger: TATCTTTTGTCCATACCATCAGGGTCCTCCACAGAA...CAGACCCATGAAATTAGGCGCCTTGTTCGGCTGCCTTTCACGCTTCTTTAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCACATTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCTCATACTGTCATCGATaGTGTGGTCATAGAGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LPTFLAPAYNPVDVVSSISYCHR*CGHRVV Trigger: GACAACTCTATGACCACACCATCGATGACAGTATGA...GATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAATGTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTGATATAGTGCCAGTCTaGAAAGGCCCAGGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LEGTLVRTGAKIMYFLLVDIVPV*KGPGWA Trigger: TGCCCAGCCTGGGCCTTTCCAGACTGGCACTATATC...AACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGTACCTTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CAA 90 bp | ACTTTGTTCAGGAGAGAGACAGCACATCTAAATGAGAAGCAGGTTTaGCTTCCTTCTCATCTCTGCCTTGAGGATCCTTTTTCTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: TLFRRETAHLNEKQV*LPSHLCLEDPFSWT Trigger: GGTCCAAGAAAAAGGATCCTCAAGGCAGAGATGAGAAGGAAGCAAAACCTGCTTCTCATTTAGATGTGCTGTCTCTCTCCTGAACAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR CCA 90 bp | AACTCTGAAAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTAACGTCTCTGAATTCTaGTTATCTAGAAGGTACACT | + |
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Preference number: 2 (lower is better) Translates to: NSESKQRACGFGGFSLMANVSEF*LSRRYT Trigger: AGTGTACCTTCTAGATAACCAGAATTCAGAGACGTT...AGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTTTCAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGTCTTCTTCAGGTCCTaGTCCCCTAGTACAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: EQSNVIVGNLISFIILTVVFFRS*SPSTTF Trigger: AAAAGTTGTACTAGGGGATCAGGACCTGAAGAAGAC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACTGAAGGTCTGTTCATaGGATTCTGTCTTCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: EQSNVIVGNLISFIILTVLKVCS*DSVFFR Trigger: CCTGAAGAAGACAGAATCCCATGAACAGACCTTCAG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| 3UTR CCA 72 bp | GGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATaGACCCAGGACATCCCTGGCTACGCAGGAAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GPGWATMPLSRA*TQDIPGYAGSP Trigger: GGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CCA 72 bp | TTTCCTGTGAACTCAGTGGAGGTGGGGCGCTATGTGTaGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCGGCG | + |
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Preference number: 3 (lower is better) Translates to: FPVNSVEVGRYV*LPQVEPEAAAA Trigger: CGCCGCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCACTGAGTTCACAGGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGCAGAGGCAAACCTACCAGGGCGACATCAATCCCGGGCCAGGGCAGCCCGGCTGTGCTGACTGCTaGCTCGTTACATTCGCGGAA | + |
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Preference number: 3 (lower is better) Translates to: VLQRQTYQGDINPGPGQPGCADC*LVTFAE Trigger: TTCCGCGAATGTAACGAGCAAGCAGTCAGCACAGCC...GGGCTGCCCTGGCCCGGGATTGATGTCGCCCTGGTAGGTTTGCCTCTGCAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR TCA 72 bp | GACTCTGCTGATGTGAGCCTCCTTAAGAAGCCCCCTTaGGGGCTGCTTGCCAAAGGCATGCCTCTGTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: DSADVSLLKKPP*GLLAKGMPLWL Trigger: AAGCCACAGAGGCATGCCTTTGGCAAGCAGCCCTCAAGGGGGCTTCTTAAGGAGGCTCACATCAGCAGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR TCA 72 bp | CCCGAGTCACCCTGGCAGGTGTCTGATCCGGGCTTCTaGAGGTTCCCCGCACAAATCATACTGTCATCGATG | + |
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Preference number: 3 (lower is better) Translates to: PESPWQVSDPGF*RFPAQIILSSM Trigger: CATCGATGACAGTATGATTTGTGCGGGGAACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGTGACTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGCAGAGGCAAACCTACCAGGGCGACATCAATCCCGGGCCAGGGCAGCCCATTTTGAACCCTACTTaGTTCAGGAGAGAGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: VLQRQTYQGDINPGPGQPILNPT*FRRETA Trigger: TGCTGTCTCTCTCCTGAACAAAGTAGGGTTCAAAAT...GGGCTGCCCTGGCCCGGGATTGATGTCGCCCTGGTAGGTTTGCCTCTGCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR-3UTR CAA 90 bp | AGTCACCCTGGCAGGTGTCTGATCCGGGCTTCTGAAGGTTCCCCGCACAAATCAGGTGTGGTCATAGAGTaGTCGGGAGTTGCACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SHPGRCLIRASEGSPHKSGVVIE*SGVAQR Trigger: CCTTTGTGCAACTCCCGACAACTCTATGACCACACC...TGATTTGTGCGGGGAACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR CCA 72 bp | GGGTTAGCGATTAGCTTGACTTTAGCATCCAGGAGCTaGCGGGACCCTTCCCCTGTTTCTGTAACACCCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLAISLTLASRS*RDPSPVSVTPQ Trigger: CTGGGGTGTTACAGAAACAGGGGAAGGGTCCCGCCAGCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCACCCTGGCAGGTGTCTGATCCGGGCTTCTGAAGGTTCCCCGCACAAATCAGGGTTAGCGATTAGCTaGACTTTAGCATCCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SHPGRCLIRASEGSPHKSGLAIS*TLASRS Trigger: GCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCC...TGATTTGTGCGGGGAACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR TCA 72 bp | AAAGGCAGCCGAACAAGGCGCCTAATTTCATGGGTCTaGGATGACCGGGCGGATGACACCTGGGTTAAACTT | + |
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Preference number: 3 (lower is better) Translates to: KGSRTRRLISWV*DDRADDTWVKL Trigger: AAGTTTAACCCAGGTGTCATCCGCCCGGTCATCTCAGACCCATGAAATTAGGCGCCTTGTTCGGCTGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
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| 3UTR GCA 72 bp | AAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTaGATGAGAATGGCTGGTTCTGTGGAGGACCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: KSLWFWGLLSDG*MRMAGSVEDPD Trigger: ATCAGGGTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR TCA 72 bp | TCTTGTTGGTTCCCAGAGAGAAAAGGCCTCATGAAATaGTATAGTGCCAGTCTGGAAAGGCCCAGGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: SCWFPERKGLMK*YSASLERPRLG Trigger: GCCCAGCCTGGGCCTTTCCAGACTGGCACTATATCATTTCATGAGGCCTTTTCTCTCTGGGAACCAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR TCA 72 bp | GCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTaGTGGCTGCATGAGAATGGCTGGTTCTGTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ANKELVVLGASL*WLHENGWFCGG Trigger: TCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CCA 72 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATaGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGQAGISDSQSP*WRTSLNSGYLE Trigger: TTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CCA 72 bp | TTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTaGTTATCTAGAAGGTACACTTGTCAGAACGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: FAVSMVENVSEF*LSRRYTCQNGG Trigger: GCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CCA 72 bp | GGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTaGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: GQAGISDSQSPW*RTSLNSGYLEG Trigger: ACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR CCA 72 bp | TCTGAAGGTTCCCCGCACAAATCATACTGTCATCGATaGTGTGGTCATAGAGTTGTCGGGAGTTGCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: SEGSPHKSYCHR*CGHRVVGSCTK Trigger: CTTTGTGCAACTCCCGACAACTCTATGACCACACCATCGATGACAGTATGATTTGTGCGGGGAACCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
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| 3UTR TCA 72 bp | GTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCATaGAATGATATAGTGCCAGTCTGGAAAGGCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: VFLVGSQREKAS*NDIVPVWKGPG Trigger: GCCTGGGCCTTTCCAGACTGGCACTATATCATTTCATGAGGCCTTTTCTCTCTGGGAACCAACAAGAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR TCA 72 bp | TGGCTGCATGAGAATGGCTGGTTCTGTGGAGGACCCTaGTGGTATGGACAAAAGATAAAGAGTCAAGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: WLHENGWFCGGP*WYGQKIKSQGN Trigger: GTTTCCTTGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCATTCTCATGCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR-3UTR CAA 90 bp | TCTGAAAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTGCAATAATGTATTTCTTGTaGGTTCCCAGAGAGAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SESKQRACGFGGFSLMAAIMYFL*VPREKR Trigger: CCTTTTCTCTCTGGGAACCAACAAGAAATACATTAT...TGCAGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| 3UTR-3UTR CAA 90 bp | GATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTATAATGTATTTCTTGTaGGTTCCCAGAGAGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DSQSPWWRTSLNSGYLEGIMYFL*VPREKR Trigger: CCTTTTCTCTCTGGGAACCAACAAGAAATACATTAT...ACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGGTGGGGCGCTATGTGTGGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCCCACGGGTGCTTGCCTaGTGTGCTCTTAAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGGGALCVASAGGARGSSPRVLA*CALKAP Trigger: GGGGGCTTTAAGAGCACAGCAGGCAAGCACCCGTGG...GCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGTGGGGCGCTATGTGTGGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCGCTTGGGGCATGGAGGTaGTCAACGGCAGTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VEVGRYVWLPQVEPEAAALGAWR*STAVRS Trigger: AGACCTCACTGCCGTTGACCACCTCCATGCCCCAAG...CGCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGAGCACCCAGCAGGGGTaGATCAGGGCGCCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGAGQAGISDSQSPWWRTSTQQG*IRAPPQ Trigger: CTGTGGGGGCGCCCTGATCCACCCCTGCTGGGTGCT...CGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGCACCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGGTGGGGCGCTATGTGTGGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCCCACAGAAGTGGCCTTaGGGCATGGAGGTGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGGGALCVASAGGARGSSPQKWP*GMEVVN Trigger: GTTGACCACCTCCATGCCCCAAGGCCACTTCTGTGG...GCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAGCACCCAGCAGGGGTaGATCAGGGCGCCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLSTQQG*IRAPPQ Trigger: CTGTGGGGGCGCCCTGATCCACCCCTGCTGGGTGCT...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTCAGGGGTGGTCTGCGTaGCACTGGGGTCTTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGQQCLCLEHGPRTSLAQGWSA*HWGLRL Trigger: CAGACGAAGACCCCAGTGTCACGCAGACCACCCCTG...AGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078284.13 |
||
| CDS-3UTR GCA 90 bp | CTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTTGGAACGGCAGTGAGGTCTaGAGGGACACCTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHGPRTSLATQEAPLVWNGSEV*RDTCHG Trigger: CCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTT...CCAAACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | CCAGTCTGGAAAGGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCGTCGGTACAGTGGGCTaGAGTGAGCACCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVWKGPGWATMPLSRAWTVGTVG*SEHPAG Trigger: CCCTGCTGGGTGCTCACTGCAGCCCACTGTACCGAC...GGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCCTTTCCAGACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGGGCAGGGGTTTGGCCTaGATGCCGGAAGCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLGRGLA*MPEALW Trigger: CCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCC...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | CTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTTGGTCAGTGAGAGCCCAATaGCTGACTTCCCCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHGPRTSLATQEAPLVWSVRAQ*LTSPPG Trigger: CCCTGGTGGGGAAGTCAGTCATTGGGCTCTCACTGA...CCAAACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGACCCTGGCAGGTGTCTaGTCCGGGCTTCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLTLAGV*SGLLKV Trigger: AACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGT...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGTTCTCAGGGGTGGTCTaGGTGACACTGGGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLFSGVV*VTLGSS Trigger: CGAAGACCCCAGTGTCACGCAGACCACCCCTGAGAA...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078284.13 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGTGGGGCGCTATGTGTGGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCGTTTGTGGTCTCCATCTaGGTTTCTGCAGAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEVGRYVWLPQVEPEAAAFVVSI*VSAEVV Trigger: CACAACTTCTGCAGAAACCCAGATGGAGACCACAAA...CGCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACATTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCAGCACCCAGCAGGGGTaGATCAGGGCGCCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTFLAPAYNPVDVVSSISTQQG*IRAPPQ Trigger: CTGTGGGGGCGCCCTGATCCACCCCTGCTGGGTGCT...GATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAATGTGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTTTAGCATCCAGGAGCTaGCGGGACCCTTCCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QAGQQCLCLEHGPRTSLALASRS*RDPSPV Trigger: AACAGGGGAAGGGTCCCGCCAGCTCCTGGATGCTAA...AGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | CCAGTCTGGAAAGGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCTTAGCATCCAGGAGCTaGCGGGACCCTTCCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVWKGPGWATMPLSRAWTLASRS*RDPSPV Trigger: AACAGGGGAAGGGTCCCGCCAGCTCCTGGATGCTAA...GGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCCTTTCCAGACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCATTCTGGCAGGGGTTTaGCCTGCATGCCGGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMPLSRAWTQDIPGYAGSILAGV*PACRKH Trigger: GTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAAT...GCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCAGACTCCGCCATTCTaGCAGGGGTTTGGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGPGWATMPLSRAWTQDIQTPPF*QGFGLH Trigger: ATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTG...GATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | CTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTTGGTGCTCTGCGATCCCGTaGGTCTCTGCATCCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LEHGPRTSLATQEAPLVWCSAIP*VSASSI Trigger: TATGGAGGATGCAGAGACCCACGGGATCGCAGAGCA...CCAAACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TTGTGGTTTTGGGGGCTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGGCGCCCCCACAGAAGTaGCCTTGGGGCATGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWFWGLLSDGCMRMAGSVAPPQK*PWGMEV Trigger: CACCTCCATGCCCCAAGGCCACTTCTGTGGGGGCGC...CACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAACCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AGTCACCCTGGCAGGTGTCTGATCCGGGCTTCTGAAGGTTCCCCGCACAAATCAGCAAAGTCGGTACAGTaGGCTGCAGTGAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHPGRCLIRASEGSPHKSAKSVQ*AAVSTQ Trigger: CTGGGTGCTCACTGCAGCCCACTGTACCGACTTTGC...TGATTTGTGCGGGGAACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| 3UTR CAA 72 bp | CAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTaGGTGCTAAAGACGAGGGGCTTCAAGGCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDIPGYAGSPSC*VLKTRGFKALQ Trigger: CTGCAGAGCCTTGAAGCCCCTCGTCTTTAGCACCAAACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGGATTCCAGAGCACAGTaGCCACCCACTGGCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLDSRAQ*PPTGFN Trigger: GTTAAAGCCAGTGGGTGGTCACTGTGCTCTGGAATC...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | CAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCGTGTAAGGGTATTTaGAGGCACAGCGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCLCLEHGPRTSLATQEAPCKGI*RHSGSR Trigger: CCTACTACCGCTGTGCCTGCAAATACCCTTACACGG...GGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | CGGGAGTTGCACAAAGGGTTAGCGATTAGCTTGACTTTAGCATCCAGGAGCTGGAACGGCAGTGAGGTCTaGAGGGACACCTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RELHKGLAISLTLASRSWNGSEV*RDTCHG Trigger: CCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTT...CCAGCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCCTTTGTGCAACTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCAGGGGTGTCAGGCACTaGACAGACTGTGACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: QCLCLEHGPRTSLATQEARGVRH*TDCDIT Trigger: TGTGATGTCACAGTCTGTCCAGTGCCTGACACCCCT...GGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCCTTCTCACAGCGCCCCCACAGAAGTaGCCTTGGGGCATGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLAPAYNPVDVVSSILLTAPPQK*PWGMEV Trigger: CACCTCCATGCCCCAAGGCCACTTCTGTGGGGGCGC...TGTGAGAAGGATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGGTTTTGGGGGCTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGCCACGGGTGCTTGCCTaGTGTGCTCTTAAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWFWGLLSDGCMRMAGSVPRVLA*CALKAP Trigger: GGGGGCTTTAAGAGCACAGCAGGCAAGCACCCGTGG...CACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAACCACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | TCCCACATTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCCTCCACGGGTGCTTGCCTaGTGTGCTCTTAAAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHIPGPSLQSRRRSKFHPPRVLA*CALKAP Trigger: GGGGGCTTTAAGAGCACAGCAGGCAAGCACCCGTGG...AGGATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAATGTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTTTTATGTCGGTACAGTaGGCTGCAGTGAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLEHGPRTSLATQEAPLVFMSVQ*AAVSTQ Trigger: CTGGGTGCTCACTGCAGCCCACTGTACCGACATAAA...AACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCGTGTTCACAGGGGTTaGACTGGCATGGATCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TMPLSRAWTQDIPGYAGSRVHRG*TGMDHR Trigger: ACGATGATCCATGCCAGTCCAACCCCTGTGAACACG...GCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078284.13 |
||
| CDS-3UTR TCA 90 bp | TGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTGGCATGGGTTCTGGTTaGCTGTCTTACTCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLEHGPRTSLATQEAPLVGMGSG*LSYSLC Trigger: GCAAAGTGAGTAAGACAGTCAACCAGAACCCATGCC...AACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGGCACTGGACAGACTGTaGCATCACAGTATTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLALDRL*HHSIPI Trigger: AATGGGAATACTGTGATGTCACAGTCTGTCCAGTGC...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTGCAAACGGCAGTGAGGTCTaGAGGGACACCTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: SESKQRACGFGGFSLMAANGSEV*RDTCHG Trigger: CCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTT...TGCAGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCAAGGCCCCGAGAAGGGGGCTaGGCAGCTGCAACTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLVLWRTLMVWTKDKESRPREGG*AAATEG Trigger: ACCTTCAGTTGCAGCTGCCCAGCCCCCTTCTCGGGG...CCTTGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGGTGGGGCGCTATGTGTGGCTTCCGCAGGTGGAGCCAGAGGCAGCAGCAAAGCAATGTCATTGTaGGGAATCTCATCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGGALCVASAGGARGSSKAMSL*GISSLS Trigger: TGAAAGAGATGAGATTCCCCACAATGACATTGCTTT...GCTGCTGCCTCTGGCTCCACCTGCGGAAGCCACACATAGCGCCCCACCTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| 3UTR CAA 72 bp | AGTTGTCGGGAGTTGCACAAAGGGTTAGCGATTAGCTaGACTTTAGCATCCAGGAGCTGGCGGGACCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCRELHKGLAIS*TLASRSWRDPS Trigger: GGAAGGGTCCCGCCAGCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCCTTTGTGCAACTCCCGACAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR GCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGCACATGGGTTGTCCTTaGACTTGTTTTGTGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLHMGCP*TCFVQS Trigger: AGACTGCACAAAACAAGTGCAAGGACAACCCATGTG...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTGCAGGCAGGGGTTTGGCCTaGATGCCGGAAGCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SESKQRACGFGGFSLMAAGRGLA*MPEALW Trigger: CCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCC...TGCAGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGGGGGTTGGACTGGCATaGATCTGGGTCTGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPREGVGLA*IWVWGR Trigger: GCGCCCCCAGACCCAGATCCATGCCAGTCCAACCCC...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GTTCTAAAGAAGCGTGAAAGGCAGCCGAACAAGGCGCCTAATTTCATGGGTCTGATTCTGGCAGGGGTTTaGCCTGCATGCCGGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLKKRERQPNKAPNFMGLILAGV*PACRKH Trigger: GTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAAT...CAGACCCATGAAATTAGGCGCCTTGTTCGGCTGCCTTTCACGCTTCTTTAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TTACAATCCCGTAGACGTAGTAAGTTCCATCCTTCTCACAGGTTAGAGGGCCCCCCACAGAAGTGGCCTTaGGGCATGGAGGTGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSRRRSKFHPSHRLEGPPQKWP*GMEVVN Trigger: GTTGACCACCTCCATGCCCCAAGGCCACTTCTGTGG...GGGGCCCTCTAACCTGTGAGAAGGATGGAACTTACTACGTCTACGGGATTGTAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR CCA 90 bp | AGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTGCGCCCCCACAGAAGTaGCCTTGGGGCATGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGAKIMYFLLVPREKRPAPPQK*PWGMEV Trigger: CACCTCCATGCCCCAAGGCCACTTCTGTGGGGGCGC...AGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGCTGAAGGTCTGTTCATaGGATTCTGTCTTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQQCLCLEHGPRTSLATQLKVCS*DSVFFR Trigger: CCTGAAGAAGACAGAATCCCATGAACAGACCTTCAG...CTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| 3UTR CAA 72 bp | TGCTTGCTCGTTACATTCGCGGAAAGGGTCAGGGACTaGCTGGCTCCAGCAGTCTGCATTTTGAACCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: CLLVTFAERVRD*LAPAVCILNPT Trigger: AGTAGGGTTCAAAATGCAGACTGCTGGAGCCAGCAAGTCCCTGACCCTTTCCGCGAATGTAACGAGCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | TTTTGGGGGCTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGGAGGACGGCATGGGTTCTGGTTaGCTGTCTTACTCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FWGLLSDGCMRMAGSVEDGMGSG*LSYSLC Trigger: GCAAAGTGAGTAAGACAGTCAACCAGAACCCATGCC...GTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGCCACTGGCTTTAACTTaGGCAAAGCAATGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQQCLCLEHGPRTSLATQPLALT*AKQCHC Trigger: ACAATGACATTGCTTTGCTCAAGTTAAAGCCAGTGG...CTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | CCTGGGTTAAACTTCCCGCGGGCTTCCTCTGAAGTCACAGCCATTAGTTCTGCACTCCATCTGGGTTTCTaGAGAAGTTGTGCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLNFPRASSEVTAISSALHLGF*RSCALR Trigger: TCGCAGAGCACAACTTCTGCAGAAACCCAGATGGAG...TGCAGAACTAATGGCTGTGACTTCAGAGGAAGCCCGCGGGAAGTTTAACCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | AGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTGTCGGTACAGTGGGCTaGAGTGAGCACCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGAKIMYFLLVPREKRPVGTVG*SEHPAG Trigger: CCCTGCTGGGTGCTCACTGCAGCCCACTGTACCGAC...AGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | ACAAATCATACTGTCATCGATGGTGTGGTCATAGAGTTGTCGGGAGTTGCACAAGTCGGTACAGTGGGCTaGAGTGAGCACCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TNHTVIDGVVIELSGVAQVGTVG*SEHPAG Trigger: CCCTGCTGGGTGCTCACTGCAGCCCACTGTACCGAC...TTGTGCAACTCCCGACAACTCTATGACCACACCATCGATGACAGTATGATTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCAGGCCAGCCTCCCTGTaGATGGTGGTCTTTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASRDLRFAVSMVENVSEFRPASL*MVVFIQ Trigger: TTGGATAAAGACCACCATGCACAGGGAGGCTGGCCT...GAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGCCCCGAGAAGGGGGCTaGGCAGCTGCAACTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPREPREGG*AAATEG Trigger: ACCTTCAGTTGCAGCTGCCCAGCCCCCTTCTCGGGG...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AGTTGTCGGGAGTTGCACAAAGGGTTAGCGATTAGCTTGACTTTAGCATCCAGGCTTGGGGCATGGAGGTaGTCAACGGCAGTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCRELHKGLAISLTLASRLGAWR*STAVRS Trigger: AGACCTCACTGCCGTTGACCACCTCCATGCCCCAAG...CCTGGATGCTAAAGTCAAGCTAATCGCTAACCCTTTGTGCAACTCCCGACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR CCA 90 bp | CTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTTGGTCATACTGTCATCGATaGTGTGGTCATAGAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEHGPRTSLATQEAPLVWSYCHR*CGHRVV Trigger: GACAACTCTATGACCACACCATCGATGACAGTATGA...CCAAACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTTCATACTGTCATCGATaGTGTGGTCATAGAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGQQCLCLEHGPRTSLASYCHR*CGHRVV Trigger: GACAACTCTATGACCACACCATCGATGACAGTATGA...AGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | TTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACTCAGTGAGAGCCCAATaGCTGACTTCCCCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FAVSMVENVSEFWLSRRYSVRAQ*LTSPPG Trigger: CCCTGGTGGGGAAGTCAGTCATTGGGCTCTCACTGA...GTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCCTTCTCACAGATTCCAGAGCACAGTaGCCACCCACTGGCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLAPAYNPVDVVSSILLTDSRAQ*PPTGFN Trigger: GTTAAAGCCAGTGGGTGGTCACTGTGCTCTGGAATC...TGTGAGAAGGATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGCAACTTTTAGATGCTTaGTGTTTATGTCGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGAGQAGISDSQSPWWRTQLLDA*CLCRYS Trigger: ACTGTACCGACATAAACACCAAGCATCTAAAAGTTG...CGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATCGGGGGTCCAATCTaGGTCTGGGGGCGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSLNSGYLEGTLVRTGAKIGGPI*VWGRNE Trigger: TTCATTGCGCCCCCAGACCCAGATTGGACCCCCGAT...CTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000078284.13 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCCTTCTCACACCACTGGCTTTAACTTaGGCAAAGTCGGTACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLAPAYNPVDVVSSILLTPLALT*AKSVQW Trigger: CCACTGTACCGACTTTGCTCAAGTTAAAGCCAGTGG...TGTGAGAAGGATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS-3UTR GCA 90 bp | AGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTGGGGTTTGGCCTGCATaGCGGAAGCACTTTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGAKIMYFLLVPREKRPGVWPA*RKHFGA Trigger: TGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCC...AGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGGGGGTTTGGCCTGCATaGCGGAAGCACTTTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPREGVWPA*RKHFGA Trigger: TGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCC...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATTCACAGGGGTTGGACTaGCATGGATCTGGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEFWLSRRYTCQNGGKDSQGLD*HGSGSG Trigger: CCCAGACCCAGATCCATGCCAGTCCAACCCCTGTGA...ATCTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAACAGACTCCGCCATTCTaGCAGGGGTTTGGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDSQSPWWRTSLNSGYLEQTPPF*QGFGLH Trigger: ATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTG...TTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AGGGACTTGCTGGCTCCAGCAGTCTGCATTTTGAACCCTACTTTGTTCAGGAGACCCCTTATACTGGTCTaGACAGGCACAGGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLLAPAVCILNPTLFRRPLILV*TGTGKP Trigger: AGGTTTACCTGTGCCTGTCCAGACCAGTATAAGGGG...TCTCCTGAACAAAGTAGGGTTCAAAATGCAGACTGCTGGAGCCAGCAAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGGGGGCTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGGAGGACGTTCCAGTAAAGGCATaGGTTCTGGTTGACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FWGLLSDGCMRMAGSVEDVPVKA*VLVDCL Trigger: AAGACAGTCAACCAGAACCCATGCCTTTACTGGAAC...GTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TTTTGGGGGCTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGGAGGACTTTGTGGTCTCCATCTaGGTTTCTGCAGAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FWGLLSDGCMRMAGSVEDFVVSI*VSAEVV Trigger: CACAACTTCTGCAGAAACCCAGATGGAGACCACAAA...GTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAGCCCCCAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGCTTGGGGCATGGAGGTaGTCAACGGCAGTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPRELGAWR*STAVRS Trigger: AGACCTCACTGCCGTTGACCACCTCCATGCCCCAAG...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAACCACAGAAGTGGCCTTaGGGCATGGAGGTGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SDSQSPWWRTSLNSGYLEPQKWP*GMEVVN Trigger: GTTGACCACCTCCATGCCCCAAGGCCACTTCTGTGG...TTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAAAGCAATGTCATTGTaGGGAATCTCATCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGQAGISDSQSPWWRTSLKAMSL*GISSLS Trigger: TGAAAGAGATGAGATTCCCCACAATGACATTGCTTT...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | ACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGGATTCCAGAGCACAGTaGCCACCCACTGGCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLNSGYLEGTLVRTGAKDSRAQ*PPTGFN Trigger: GTTAAAGCCAGTGGGTGGTCACTGTGCTCTGGAATC...CTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACAGGGGTGGTCTGCGTaGCACTGGGGTCTTCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVQGWSA*HWGLRL Trigger: CAGACGAAGACCCCAGTGTCACGCAGACCACCCCTG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR GCA 90 bp | TTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACCCGTGTAAGGGTATTTaGAGGCACAGCGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FAVSMVENVSEFWLSRRYPCKGI*RHSGSR Trigger: CCTACTACCGCTGTGCCTGCAAATACCCTTACACGG...GTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | CTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCCCTCTTGTTTGGAGTACAACTTTTAGATaGTTGGTGTTTATGTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEHGPRTSLATQEAPLVWSTTFR*LVFMSV Trigger: TACCGACATAAACACCAAGCATCTAAAAGTTGTACT...CCAAACAAGAGGGGCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTAGTACAACTTTTAGATaGTTGGTGTTTATGTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QAGQQCLCLEHGPRTSLASTTFR*LVFMSV Trigger: TACCGACATAAACACCAAGCATCTAAAAGTTGTACT...AGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCACGTGTTCACAGGGGTTaGACTGGCATGGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGGKDNVFLVGSQREKASRVHRG*TGMDLG Trigger: ACCCAGATCCATGCCAGTCCAACCCCTGTGAACACG...TGAGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCTGCTCTGCGATCCCGTaGGTCTCTGCATCCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SPWWRTSLNSGYLEGTLVCSAIP*VSASSI Trigger: TATGGAGGATGCAGAGACCCACGGGATCGCAGAGCA...GACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | TTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACTTCTTCCCACATTCCTaGCCCCAGCTTACAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FAVSMVENVSEFWLSRRYFFPHS*PQLTIP Trigger: CGGGATTGTAAGCTGGGGCCAGGAATGTGGGAAGAA...GTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | CTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTACCCTGGCAGGTGTCTaGTCCGGGCTTCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEGTLVRTGAKIMYFLLVTLAGV*SGLLKV Trigger: AACCTTCAGAAGCCCGGATCAGACACCTGCCAGGGT...AACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGTACCTTCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGGCAGGGGTTTGGCCTaGATGCCGGAAGCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVGRGLA*MPEALW Trigger: CCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | AACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCAAGGGGTGTCAGGCACTaGACAGACTGTGACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: NGGKDNVFLVGSQREKASRGVRH*TDCDIT Trigger: TGTGATGTCACAGTCTGTCCAGTGCCTGACACCCCT...TGAGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGTTTATGTCGGTACAGTaGGCTGCAGTGAGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPREFMSVQ*AAVSTQ Trigger: CTGGGTGCTCACTGCAGCCCACTGTACCGACATAAA...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTTTCTTCCCACATTCCTaGCCCCAGCTTACAATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTGAKIMYFLLVPREKRPFFPHS*PQLTIP Trigger: CGGGATTGTAAGCTGGGGCCAGGAATGTGGGAAGAA...AGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTATCAGTGAGAGCCCAATaGCTGACTTCCCCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVSVRAQ*LTSPPG Trigger: CCCTGGTGGGGAAGTCAGTCATTGGGCTCTCACTGA...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGGGGTTTGGCCTGCATaGCGGAAGCACTTTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVGVWPA*RKHFGA Trigger: TGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCAAGGCTGTCTTACTCACTTTaGCTCGGTAAGAGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLVLWRTLMVWTKDKESRLSYSL*LGKSSH Trigger: ATGGCTACTCTTACCGAGGCAAAGTGAGTAAGACAG...CCTTGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | GATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTGATCCCGTGGGTCTCTaGATCCTCCATAAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSQSPWWRTSLNSGYLEGDPVGL*ILHKHV Trigger: AACATGTTTATGGAGGATGCAGAGACCCACGGGATC...ACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | AACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAACTCCATCTGGGTTTCTaGAGAAGTTGTGCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NVSEFWLSRRYTCQNGGKLHLGF*RSCALR Trigger: TCGCAGAGCACAACTTCTGCAGAAACCCAGATGGAG...TTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | TACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAAGGCCAGCCTCCCTGTaGATGGTGGTCTTTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YTCQNGGKDNVFLVGSQRRPASL*MVVFIQ Trigger: TTGGATAAAGACCACCATGCACAGGGAGGCTGGCCT...TCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTATTCTCAGGGGTGGTCTaGGTGACACTGGGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVFSGVV*VTLGSS Trigger: CGAAGACCCCAGTGTCACGCAGACCACCCCTGAGAA...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAATTCTGGCAGGGGTTTaGCCTGCATGCCGGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVILAGV*PACRKH Trigger: GTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAAT...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACAGACTCCGCCATTCTaGCAGGGGTTTGGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVQTPPF*QGFGLH Trigger: ATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | AACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCACCCCTTATACTGGTCTaGACAGGCACAGGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: NGGKDNVFLVGSQREKASPLILV*TGTGKP Trigger: AGGTTTACCTGTGCCTGTCCAGACCAGTATAAGGGG...TGAGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAATCGGGGGTCCAATCTaGGTCTGGGGGCGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVIGGPI*VWGRNE Trigger: TTCATTGCGCCCCCAGACCCAGATTGGACCCCCGAT...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGTCACAGGGGTTGGACTaGCATGGATCATCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPRESQGLD*HGSSSS Trigger: TGAAGACGATGATCCATGCCAGTCCAACCCCTGTGA...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078284.13 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCAGTCTTCTTCAGGTCCTaGTCCCCTAGTACAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWLVLWRTLMVWTKDKESVFFRS*SPSTTF Trigger: AAAAGTTGTACTAGGGGATCAGGACCTGAAGAAGAC...TGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | AACTCTGAAAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGATGGCTCACATGGGTTGTCCTTaGACTTGTTTTGTGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSESKQRACGFGGFSLMAHMGCP*TCFVQS Trigger: AGACTGCACAAAACAAGTGCAAGGACAACCCATGTG...AGCCATCAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTTTCAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR GCA 90 bp | AACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCAGATCCCGTGGGTCTCTaGATCCTCCATAAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGGKDNVFLVGSQREKASDPVGL*ILHKHV Trigger: AACATGTTTATGGAGGATGCAGAGACCCACGGGATC...TGAGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGAATTTCCCCTTATACTaGTCTGGACAGGCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLNSGYLEGTLVRTGAKNFPLY*SGQAQV Trigger: TACCTGTGCCTGTCCAGACCAGTATAAGGGGAAATT...CTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGGTTCCAGTAAAGGCATaGGTTCTGGTTGACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLNSGYLEGTLVRTGAKVPVKA*VLVDCL Trigger: AAGACAGTCAACCAGAACCCATGCCTTTACTGGAAC...CTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTATGCTCTGCGATCCCGTaGGTCTCTGCATCCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVCSAIP*VSASSI Trigger: TATGGAGGATGCAGAGACCCACGGGATCGCAGAGCA...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGTACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCTTGAGTGTAGACTCCTaGCTTCTTCCCACATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGTLVRTGAKIMYFLLVPLSVDS*LLPTFL Trigger: CAGGAATGTGGGAAGAAGCCAGGAGTCTACACTCAA...GGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGTACCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | TCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATAGCACTGGACAGACTGTaGCATCACAGTATTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SLNSGYLEGTLVRTGAKIALDRL*HHSIPI Trigger: AATGGGAATACTGTGATGTCACAGTCTGTCCAGTGC...TATCTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | TCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCGTCTTCTTCAGGTCCTaGTCCCCTAGTACAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPWWRTSLNSGYLEGTLVVFFRS*SPSTTF Trigger: AAAAGTTGTACTAGGGGATCAGGACCTGAAGAAGAC...GACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCACCACTGGCTTTAACTTaGGCAAAGCAATGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EWLVLWRTLMVWTKDKESPLALT*AKQCHC Trigger: ACAATGACATTGCTTTGCTCAAGTTAAAGCCAGTGG...TGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | ACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAATTTCCCCTTATACTaGTCTGGACAGGCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLVRTGAKIMYFLLVPRENFPLY*SGQAQV Trigger: TACCTGTGCCTGTCCAGACCAGTATAAGGGGAAATT...CTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CCA 90 bp | AATAACAACTCTGAAAGCAAACAAAGAGCTTGTGGTTTTGGGGGCTTCTCTCTGTTGAGTGTAGACTCCTaGCTTCTTCCCACATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNNSESKQRACGFGGFSLLSVDS*LLPTFL Trigger: CAGGAATGTGGGAAGAAGCCAGGAGTCTACACTCAA...CAGAGAGAAGCCCCCAAAACCACAAGCTCTTTGTTTGCTTTCAGAGTTGTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACGTGTTCACAGGGGTTaGACTGGCATGGATCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVRVHRG*TGMDHR Trigger: ACGATGATCCATGCCAGTCCAACCCCTGTGAACACG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACTCCATCTGGGTTTCTaGAGAAGTTGTGCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVLHLGF*RSCALR Trigger: TCGCAGAGCACAACTTCTGCAGAAACCCAGATGGAG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACCCCTTATACTGGTCTaGACAGGCACAGGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVPLILV*TGTGKP Trigger: AGGTTTACCTGTGCCTGTCCAGACCAGTATAAGGGG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCAAGGCAACTTTTAGATGCTTaGTGTTTATGTCGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLVLWRTLMVWTKDKESRQLLDA*CLCRYS Trigger: ACTGTACCGACATAAACACCAAGCATCTAAAAGTTG...CCTTGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTATCACAGGGGTTGGACTaGCATGGATCATCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVSQGLD*HGSSSS Trigger: TGAAGACGATGATCCATGCCAGTCCAACCCCTGTGA...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR TCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGCACTGGACAGACTGTaGCATCACAGTATTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVALDRL*HHSIPI Trigger: AATGGGAATACTGTGATGTCACAGTCTGTCCAGTGC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGATCCCGTGGGTCTCTaGATCCTCCATAAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVDPVGL*ILHKHV Trigger: AACATGTTTATGGAGGATGCAGAGACCCACGGGATC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR CCA 90 bp | CTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCTGAAGGTCTGTTCATaGGATTCTGTCTTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEGTLVRTGAKIMYFLLVLKVCS*DSVFFR Trigger: CCTGAAGAAGACAGAATCCCATGAACAGACCTTCAG...AACCAACAAGAAATACATTATCTTTGCCCCCGTTCTGACAAGTGTACCTTCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACACATGGGTTGTCCTTaGACTTGTTTTGTGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVHMGCP*TCFVQS Trigger: AGACTGCACAAAACAAGTGCAAGGACAACCCATGTG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACTGTCTTACTCACTTTaGCTCGGTAAGAGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVLSYSL*LGKSSH Trigger: ATGGCTACTCTTACCGAGGCAAAGTGAGTAAGACAG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAAATTTCCCCTTATACTaGTCTGGACAGGCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVNFPLY*SGQAQV Trigger: TACCTGTGCCTGTCCAGACCAGTATAAGGGGAAATT...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGTTCCAGTAAAGGCATaGGTTCTGGTTGACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVVPVKA*VLVDCL Trigger: AAGACAGTCAACCAGAACCCATGCCTTTACTGGAAC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTATTTGTGGTCTCCATCTaGGTTTCTGCAGAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQSNVIVGNLISFIILTVFVVSI*VSAEVV Trigger: CACAACTTCTGCAGAAACCCAGATGGAGACCACAAA...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS TCA 90 bp | GCCCCCACAGAAGTGGCCTTGGGGCATGGAGGTGGTCAACGGCAGTaGGGTCTGCAGGGACACCTGCCACGGGTGCTTGCCTGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: APTEVALGHGGGQRQ*GLQGHLPRVLACCA Trigger: AGCACAGCAGGCAAGCACCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTTGACCACCTCCATGCCCCAAGGCCACTTCTGTGGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
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| CDS GCA 90 bp | CAGAAGTGGCCTTGGGGCATGGAGGTGGTCAACGGCAGTGAGGTCTaGAGGGACACCTGCCACGGGTGCTTGCCTGCTGTGCTCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKWPWGMEVVNGSEV*RDTCHGCLPAVLLK Trigger: CTTTAAGAGCACAGCAGGCAAGCACCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTTGACCACCTCCATGCCCCAAGGCCACTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
||
| CDS GCA 90 bp | GTCTGTGTCGGGAACAGACTCCGCCATTCTGGCAGGGGTTTGGCCTaGATGCCGGAAGCACTTTGGAGCAGTCTGGTCCCGTGTAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCVGNRLRHSGRGLA*MPEALWSSLVPCKG Trigger: ACCCTTACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CCA 90 bp | CTCCGCCATTCTGGCAGGGGTTTGGCCTGCATGCCGGAAGCACTTTaGAGCAGTCTGGTCCCGTGTAAGGGTATTTGCAGGCACAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRHSGRGLACMPEAL*SSLVPCKGICRHSG Trigger: ACCGCTGTGCCTGCAAATACCCTTACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CCA 90 bp | TCTCCGTCTGTGTCGGGAACAGACTCCGCCATTCTGGCAGGGGTTTaGCCTGCATGCCGGAAGCACTTTGGAGCAGTCTGGTCCCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPSVSGTDSAILAGV*PACRKHFGAVWSRV Trigger: TACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACACAGACGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGGAAAGGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCCGTGTTCACAGGGGTaGGACTGGCATGGATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVWKGPGWATMPLSRAWTPCSQG*DWHGSG Trigger: CCCAGATCCATGCCAGTCCAACCCCTGTGAACACGG...GGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCCTTTCCAGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGGAAAGGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCATTCTGGCAGGGGTTaGGCCTGCATGCCGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVWKGPGWATMPLSRAWTHSGRG*ACMPEA Trigger: TGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATG...GGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCCTTTCCAGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS GCA 90 bp | GTGCTTGCCTGCTGTGCTCTTAAAGCCCCCGTAGATACGCTTGACTaGGTGTTCAGCTACCTCCGTCTTCCCGCAGGACTCGAACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLACCALKAPVDTLD*VFSYLRLPAGLEPW Trigger: CCAGGGTTCGAGTCCTGCGGGAAGACGGAGGTAGCTGAACACGCAGTCAAGCGTATCTACGGGGGCTTTAAGAGCACAGCAGGCAAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
||
| CDS GCA 90 bp | GTGTCGGGAACAGACTCCGCCATTCTGGCAGGGGTTTGGCCTGCATaGCGGAAGCACTTTGGAGCAGTCTGGTCCCGTGTAAGGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: VSGTDSAILAGVWPA*RKHFGAVWSRVRVF Trigger: AAATACCCTTACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CCA 90 bp | GTAAACCTGGATCTCCGTCTGTGTCGGGAACAGACTCCGCCATTCTaGCAGGGGTTTGGCCTGCATGCCGGAAGCACTTTGGAGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VNLDLRLCREQTPPF*QGFGLHAGSTLEQS Trigger: AGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACACAGACGGAGATCCAGGTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTCTGATGGCTGCATGAGAATGGCTGGTTCTGTGGAGGACCCTGATGGTCCCACAGAAGTGGCCTaGGGGCATGGAGGTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLSDGCMRMAGSVEDPDGPTEVA*GHGGGQ Trigger: TTGACCACCTCCATGCCCCAAGGCCACTTCTGTGGG...ACCATCAGGGTCCTCCACAGAACCAGCCATTCTCATGCAGCCATCAGAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | GCGGGGCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGGGTGTGGTCATAGAGTaGTCGGGAGTTGCACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGQAGISDSQSPWWRTSLGVVIE*SGVAQR Trigger: CCTTTGTGCAACTCCCGACAACTCTATGACCACACC...CAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGCCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | TCCCACATTCCTGGCCCCAGCTTACAATCCCGTAGACGTAGTAAGTTCCATCCTCCCACAGAAGTGGCCTaGGGGCATGGAGGTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHIPGPSLQSRRRSKFHPPTEVA*GHGGGQ Trigger: TTGACCACCTCCATGCCCCAAGGCCACTTCTGTGGG...AGGATGGAACTTACTACGTCTACGGGATTGTAAGCTGGGGCCAGGAATGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS CCA 90 bp | GTAGTAGGGGTGCTTCTGGGTAATGAGGCAATCACCATGGACACATaGGTTGTCCTTGCACTTGTTTTGTGCAGTCTGGCACCGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVGVLLGNEAITMDT*VVLALVLCSLAPAP Trigger: GGGAGCCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCTCATTACCCAGAAGCACCCCTACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTAGGCATGGGTTCTGGTaGACTGTCTTACTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QAGQQCLCLEHGPRTSLARHGFW*TVLLTL Trigger: CAAAGTGAGTAAGACAGTCAACCAGAACCCATGCCT...AGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | ACAATGCCTCTGTCTAGAGCATGGACCCAGGACATCCCTGGCTACGCAGGAAGCCAGGAACTTGGTGACTaGAGTGTAGACTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TMPLSRAWTQDIPGYAGSQELGD*SVDSWL Trigger: AAGCCAGGAGTCTACACTCAAGTCACCAAGTTCCTG...GCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS CCA 90 bp | CCCTGGCAGCTCCATCACAGGCTCCAGAAGGCTTTCCACAGGCACTaGACAGACTGTGACATCACAGTATTCCCATTTCACCTTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PWQLHHRLQKAFHRH*TDCDITVFPFHLLT Trigger: AGTGAGAAGGTGAAATGGGAATACTGTGATGTCACAGTCTGTCCAGTGCCTGTGGAAAGCCTTCTGGAGCCTGTGATGGAGCTGCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166049.8 |
||
| CDS CCA 90 bp | CACAGGCTCCAGAAGGCTTTCCACTGGGTTAGGGGTGTCAGGCACTaGACAGACTGTGACATCACAGTATTCCCATTTCACCTTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HRLQKAFHWVRGVRH*TDCDITVFPFHLLT Trigger: AGTGAGAAGGTGAAATGGGAATACTGTGATGTCACAGTCTGTCCAGTGCCTGACACCCCTAACCCAGTGGAAAGCCTTCTGGAGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 |
||
| CDS-3UTR CAA 90 bp | GATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTCCCACAGAAGTGGCCTaGGGGCATGGAGGTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DSQSPWWRTSLNSGYLEGPTEVA*GHGGGQ Trigger: TTGACCACCTCCATGCCCCAAGGCCACTTCTGTGGG...ACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTGGAAAGGCCCAGGCTGGGCAACAATGCCTCTGTCTAGAGCATGGACCAGCAAAGCAATGTCATaGTGGGGAATCTCATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVWKGPGWATMPLSRAWTSKAMS*WGISSL Trigger: AAGAGATGAGATTCCCCACAATGACATTGCTTTGCT...GGTCCATGCTCTAGACAGAGGCATTGTTGCCCAGCCTGGGCCTTTCCAGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | AGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTCATTCTGGCAGGGGTTaGGCCTGCATGCCGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTGAKIMYFLLVPREKRPHSGRG*ACMPEA Trigger: TGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATG...AGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAGGGATCTCAGATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCCAGGAACTTGGTGACTaGAGTGTAGACTCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASRDLRFAVSMVENVSEFQELGD*SVDSWL Trigger: AAGCCAGGAGTCTACACTCAAGTCACCAAGTTCCTG...GAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATCTGAGATCCCTGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | GATTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTCCGTGTTCACAGGGGTaGGACTGGCATGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: DSQSPWWRTSLNSGYLEGPCSQG*DWHGSS Trigger: CGATGATCCATGCCAGTCCAACCCCTGTGAACACGG...ACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078284.13 |
||
| CDS-3UTR CAA 90 bp | CGGGAGTTGCACAAAGGGTTAGCGATTAGCTTGACTTTAGCATCCAGGAGCTGGCCCACTGGCTTTAACTaGAGCAAAGTCGGTACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RELHKGLAISLTLASRSWPTGFN*SKVGTV Trigger: CACTGTACCGACTTTGCTCAAGTTAAAGCCAGTGGG...CCAGCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCCTTTGTGCAACTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165522.2 |
||
| CDS GCA 90 bp | CCAGGGTTTGTGGTCTCCATCTGGGTTTCTGCAGAAGTTGTGCTCTaGGATCCCGTGGGTCTCTGCATCCTCCATAAACATGTTATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGFVVSIWVSAEVVL*DPVGLCILHKHVIS Trigger: ACTTATAACATGTTTATGGAGGATGCAGAGACCCACGGGATCGCAGAGCACAACTTCTGCAGAAACCCAGATGGAGACCACAAACCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTTCTCATCTCTGCCTTGAGGATCCTTTTTCTTGGACCGGGGTGGAAGAGAGGCATGGGTTCTGGTaGACTGTCTTACTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSHLCLEDPFSWTGVEERHGFW*TVLLTL Trigger: CAAAGTGAGTAAGACAGTCAACCAGAACCCATGCCT...CTCTTCCACCCCGGTCCAAGAAAAAGGATCCTCAAGGCAGAGATGAGAAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | AGGGACTTGCTGGCTCCAGCAGTCTGCATTTTGAACCCTACTTTGTTCAGGAGAGGGTTAGCGATTAGCTaGACTTTAGCATCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDLLAPAVCILNPTLFRRGLAIS*TLASRS Trigger: GCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCC...TCTCCTGAACAAAGTAGGGTTCAAAATGCAGACTGCTGGAGCCAGCAAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | TTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACGGGTTGTCCTTGCACTaGTTTTGTGCAGTCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FAVSMVENVSEFWLSRRYGLSLH*FCAVWH Trigger: GTGCCAGACTGCACAAAACAAGTGCAAGGACAACCC...GTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | ACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGGGGTTGTCCTTGCACTaGTTTTGTGCAGTCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TSLNSGYLEGTLVRTGAKGLSLH*FCAVWH Trigger: GTGCCAGACTGCACAAAACAAGTGCAAGGACAACCC...CTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTTAAACTTCCCGCGGGCTTCCTCTGAAGTCACAGCCATTAGTTCTGCAAGCAAAGCAATGTCATaGTGGGGAATCTCATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGLNFPRASSEVTAISSASKAMS*WGISSL Trigger: AAGAGATGAGATTCCCCACAATGACATTGCTTTGCT...TGCAGAACTAATGGCTGTGACTTCAGAGGAAGCCCGCGGGAAGTTTAACCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCAAGGGGGTTAGCGATTAGCTaGACTTTAGCATCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLVLWRTLMVWTKDKESRGLAIS*TLASRS Trigger: GCTCCTGGATGCTAAAGTCAAGCTAATCGCTAACCC...CCTTGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS CCA 90 bp | GTTATAAGTCTCCTGCAAGAGGAGGTGGGAGTTCCAGTAAAGGCATaGGTTCTGGTTGACTGTCTTACTCACTTTGCCTCGGTAAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VISLLQEEVGVPVKA*VLVDCLTHFASVRV Trigger: TACTCTTACCGAGGCAAAGTGAGTAAGACAGTCAACCAGAACCCATGCCTTTACTGGAACTCCCACCTCCTCTTGCAGGAGACTTATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACATTCTGGCAGGGGTTaGGCCTGCATGCCGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EQSNVIVGNLISFIILTVHSGRG*ACMPEA Trigger: TGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS-3UTR CAA 90 bp | ACGTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGACGAAACACCAGGGTTaGTGGTCTCCATCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSLNSGYLEGTLVRTGAKTKHQG*WSPSGF Trigger: AAACCCAGATGGAGACCACAAACCCTGGTGTTTCGT...CTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR CAA 90 bp | TTCGCAGTCTCCATGGTGGAGAACGTCTCTGAATTCTGGTTATCTAGAAGGTACACGAAACACCAGGGTTaGTGGTCTCCATCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FAVSMVENVSEFWLSRRYTKHQG*WSPSGF Trigger: AAACCCAGATGGAGACCACAAACCCTGGTGTTTCGT...GTACCTTCTAGATAACCAGAATTCAGAGACGTTCTCCACCATGGAGACTGCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR CAA 90 bp | AGGGACTTGCTGGCTCCAGCAGTCTGCATTTTGAACCCTACTTTGTTCAGGAGACCCACTGGCTTTAACTaGAGCAAAGCAATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RDLLAPAVCILNPTLFRRPTGFN*SKAMSL Trigger: CAATGACATTGCTTTGCTCAAGTTAAAGCCAGTGGG...TCTCCTGAACAAAGTAGGGTTCAAAATGCAGACTGCTGGAGCCAGCAAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGAATTCTGGTTATCTAGAAGGTACACTTGTCAGAACGGGGGCAAAGATGGTGTGGTCATAGAGTaGTCGGGAGTTGCACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSEFWLSRRYTCQNGGKDGVVIE*SGVAQR Trigger: CCTTTGTGCAACTCCCGACAACTCTATGACCACACC...ATCTTTGCCCCCGTTCTGACAAGTGTACCTTCTAGATAACCAGAATTCAGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTACCGTGTTCACAGGGGTaGGACTGGCATGGATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: EQSNVIVGNLISFIILTVPCSQG*DWHGSS Trigger: CGATGATCCATGCCAGTCCAACCCCTGTGAACACGG...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
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| CDS TCA 90 bp | TCCACCCTGAAGGTCTGTTCATGGGATTCTGTCTTCTTCAGGTCCTaGTCCCCTAGTACAACTTTTAGATGCTTGGTGTTTATGTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: STLKVCSWDSVFFRS*SPSTTFRCLVFMSV Trigger: TACCGACATAAACACCAAGCATCTAAAAGTTGTACTAGGGGATCAGGACCTGAAGAAGACAGAATCCCATGAACAGACCTTCAGGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000166049.8 |
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| CDS-3UTR CAA 90 bp | AGAACGGGGGCAAAGATAATGTATTTCTTGTTGGTTCCCAGAGAGAAAAGGCCTACACATGGGTTGTCCTaGCACTTGTTTTGTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTGAKIMYFLLVPREKRPTHGLS*HLFCAV Trigger: GACTGCACAAAACAAGTGCAAGGACAACCCATGTGT...AGGCCTTTTCTCTCTGGGAACCAACAAGAAATACATTATCTTTGCCCCCGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
||
| CDS-3UTR CAA 90 bp | GAATGGCTGGTTCTGTGGAGGACCCTGATGGTATGGACAAAAGATAAAGAGTCACCCACTGGCTTTAACTaGAGCAAAGCAATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: EWLVLWRTLMVWTKDKESPTGFN*SKAMSL Trigger: CAATGACATTGCTTTGCTCAAGTTAAAGCCAGTGGG...TGACTCTTTATCTTTTGTCCATACCATCAGGGTCCTCCACAGAACCAGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAGGGTTGTCCTTGCACTaGTTTTGTGCAGTCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EQSNVIVGNLISFIILTVGLSLH*FCAVWH Trigger: GTGCCAGACTGCACAAAACAAGTGCAAGGACAACCC...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAACGAAACACCAGGGTTaGTGGTCTCCATCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EQSNVIVGNLISFIILTVTKHQG*WSPSGF Trigger: AAACCCAGATGGAGACCACAAACCCTGGTGTTTCGT...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAAAGCAATGTCATTGTGGGGAATCTCATCTCTTTCATTATACTGACTGTAAGGCATGGGTTCTGGTaGACTGTCTTACTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EQSNVIVGNLISFIILTVRHGFW*TVLLTL Trigger: CAAAGTGAGTAAGACAGTCAACCAGAACCCATGCCT...TACAGTCAGTATAATGAAAGAGATGAGATTCCCCACAATGACATTGCTTTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171341.8 |
||
| CDS TCA 72 bp | GAAGTGGCCTTGGGGCATGGAGGTGGTCAACGGCAGTaGGGTCTGCAGGGACACCTGCCACGGGTGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EVALGHGGGQRQ*GLQGHLPRVLA Trigger: GGCAAGCACCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTTGACCACCTCCATGCCCCAAGGCCACTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
||
| CDS GCA 72 bp | CCTTGGGGCATGGAGGTGGTCAACGGCAGTGAGGTCTaGAGGGACACCTGCCACGGGTGCTTGCCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWGMEVVNGSEV*RDTCHGCLPAV Trigger: CACAGCAGGCAAGCACCCGTGGCAGGTGTCCCTGCAGACCTCACTGCCGTTGACCACCTCCATGCCCCAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
||
| CDS GCA 72 bp | GGGAACAGACTCCGCCATTCTGGCAGGGGTTTGGCCTaGATGCCGGAAGCACTTTGGAGCAGTCTGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GNRLRHSGRGLA*MPEALWSSLVP Trigger: CGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CCA 72 bp | GTGTCGGGAACAGACTCCGCCATTCTGGCAGGGGTTTaGCCTGCATGCCGGAAGCACTTTGGAGCAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGTDSAILAGV*PACRKHFGAVW Trigger: CCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CAA 90 bp | ATCTCCGTCTGTGTCGGGAACAGACTCCGCCATTCTGGCAGGGGTTaGGCCTGCATGCCGGAAGCACTTTGGAGCAGTCTGGTCCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISVCVGNRLRHSGRG*ACMPEALWSSLVPC Trigger: ACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACACAGACGGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS GCA 72 bp | ACAGACTCCGCCATTCTGGCAGGGGTTTGGCCTGCATaGCGGAAGCACTTTGGAGCAGTCTGGTCCCGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TDSAILAGVWPA*RKHFGAVWSRV Trigger: TACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CCA 72 bp | GATCTCCGTCTGTGTCGGGAACAGACTCCGCCATTCTaGCAGGGGTTTGGCCTGCATGCCGGAAGCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DLRLCREQTPPF*QGFGLHAGSTL Trigger: CAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACACAGACGGAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CAA 72 bp | TGTGTCGGGAACAGACTCCGCCATTCTGGCAGGGGTTaGGCCTGCATGCCGGAAGCACTTTGGAGCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CVGNRLRHSGRG*ACMPEALWSSL Trigger: CAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGAATGGCGGAGTCTGTTCCCGACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
||
| CDS CAA 90 bp | AATGAGGCAATCACCATGGACACATGGGTTGTCCTTGCACTTGTTTaGTGCAGTCTGGCACCGGCTCCCCGAGAAGGGGGCTGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: NEAITMDTWVVLALV*CSLAPAPREGGWAA Trigger: AGCTGCCCAGCCCCCTTCTCGGGGAGCCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CCA 72 bp | TCTGGCAGGGGTTTGGCCTGCATGCCGGAAGCACTTTaGAGCAGTCTGGTCCCGTGTAAGGGTATTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGRGLACMPEAL*SSLVPCKGICR Trigger: CCTGCAAATACCCTTACACGGGACCAGACTGCTCCAAAGTGCTTCCGGCATGCAGGCCAAACCCCTGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CAA 72 bp | ATCACCATGGACACATGGGTTGTCCTTGCACTTGTTTaGTGCAGTCTGGCACCGGCTCCCCGAGAAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ITMDTWVVLALV*CSLAPAPREGG Trigger: GCCCCCTTCTCGGGGAGCCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS GCA 72 bp | TGCTGTGCTCTTAAAGCCCCCGTAGATACGCTTGACTaGGTGTTCAGCTACCTCCGTCTTCCCGCAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: CCALKAPVDTLD*VFSYLRLPAGL Trigger: GAGTCCTGCGGGAAGACGGAGGTAGCTGAACACGCAGTCAAGCGTATCTACGGGGGCTTTAAGAGCACAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
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| CDS CAA 90 bp | TGCTTCTGGGTAATGAGGCAATCACCATGGACACATGGGTTGTCCTaGCACTTGTTTTGTGCAGTCTGGCACCGGCTCCCCGAGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CFWVMRQSPWTHGLS*HLFCAVWHRLPEKG Trigger: CCCCTTCTCGGGGAGCCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCTCATTACCCAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CAA 72 bp | AGGCAATCACCATGGACACATGGGTTGTCCTTGCACTaGTTTTGTGCAGTCTGGCACCGGCTCCCCGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RQSPWTHGLSLH*FCAVWHRLPEK Trigger: CTTCTCGGGGAGCCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CAA 72 bp | GTAATGAGGCAATCACCATGGACACATGGGTTGTCCTaGCACTTGTTTTGTGCAGTCTGGCACCGGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VMRQSPWTHGLS*HLFCAVWHRLP Trigger: GGGGAGCCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCTCATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CCA 72 bp | CTCCTGCAAGAGGAGGTGGGAGTTCCAGTAAAGGCATaGGTTCTGGTTGACTGTCTTACTCACTTTGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLQEEVGVPVKA*VLVDCLTHFAS Trigger: CGAGGCAAAGTGAGTAAGACAGTCAACCAGAACCCATGCCTTTACTGGAACTCCCACCTCCTCTTGCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CCA 72 bp | CAGAAGGCTTTCCACTGGGTTAGGGGTGTCAGGCACTaGACAGACTGTGACATCACAGTATTCCCATTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QKAFHWVRGVRH*TDCDITVFPFH Trigger: GTGAAATGGGAATACTGTGATGTCACAGTCTGTCCAGTGCCTGACACCCCTAACCCAGTGGAAAGCCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 |
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| CDS CCA 72 bp | AGGGGTCGCTGGGCAAACATACAGTCTTCACATATCTaGATTCCAGAGCACAGTGACCACCCACTGGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RGRWANIQSSHI*IPEHSDHPLAL Trigger: TAAAGCCAGTGGGTGGTCACTGTGCTCTGGAATCCAGATATGTGAAGACTGTATGTTTGCCCAGCGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000165522.2 ENSMUST00000166049.8 |
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| CDS CCA 72 bp | CTCCATCACAGGCTCCAGAAGGCTTTCCACAGGCACTaGACAGACTGTGACATCACAGTATTCCCATTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LHHRLQKAFHRH*TDCDITVFPFH Trigger: GTGAAATGGGAATACTGTGATGTCACAGTCTGTCCAGTGCCTGTGGAAAGCCTTCTGGAGCCTGTGATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166049.8 |
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| CDS CAA 72 bp | TTCTGGGTAATGAGGCAATCACCATGGACACATGGGTaGTCCTTGCACTTGTTTTGTGCAGTCTGGCACCGG | + |
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Preference number: 6 (lower is better) Translates to: FWVMRQSPWTHG*SLHLFCAVWHR Trigger: CCGGTGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCTCATTACCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS TCA 72 bp | GCTCCAGAAGGCTTTCCACAGGCACTGGACAGACTGTaGCATCACAGTATTCCCATTTCACCTTCTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: APEGFPQALDRL*HHSIPISPSHC Trigger: ACAGTGAGAAGGTGAAATGGGAATACTGTGATGTCACAGTCTGTCCAGTGCCTGTGGAAAGCCTTCTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166049.8 |
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| CDS CCA 72 bp | GTGCTTCTGGGTAATGAGGCAATCACCATGGACACATaGGTTGTCCTTGCACTTGTTTTGTGCAGTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VLLGNEAITMDT*VVLALVLCSLA Trigger: TGCCAGACTGCACAAAACAAGTGCAAGGACAACCCATGTGTCCATGGTGATTGCCTCATTACCCAGAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000166049.8 ENSMUST00000171341.8 |
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| CDS CCA 72 bp | AGATGTGGCACTCAGTTCCAGAGGGAAAGGGGTCGCTaGGCAAACATACAGTCTTCACATATCTGGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: RCGTQFQRERGR*ANIQSSHIWIP Trigger: TGGAATCCAGATATGTGAAGACTGTATGTTTGCCCAGCGACCCCTTTCCCTCTGGAACTGAGTGCCACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000166049.8 |
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| CDS TCA 72 bp | AAGGTCTGTTCATGGGATTCTGTCTTCTTCAGGTCCTaGTCCCCTAGTACAACTTTTAGATGCTTGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KVCSWDSVFFRS*SPSTTFRCLVF Trigger: AAACACCAAGCATCTAAAAGTTGTACTAGGGGATCAGGACCTGAAGAAGACAGAATCCCATGAACAGACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078284.13 ENSMUST00000095948.11 ENSMUST00000163502.8 ENSMUST00000166049.8 |
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