Pregenerated sensors for HAAO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000673Ensembl transcript IDs: ENSMUST00000000687.9, ENSMUST00000234214.2, ENSMUST00000234312.2, ENSMUST00000234863.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGGAGGAATATCTCTCCCTGCCGTATAGGCACGTCCCGGTGTTaGCCCTGCTCCAGGACTCGTAGTATCATGTCTCCCTCCAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: GRRNISPCRIGTSRC*PCSRTRSIMSPSSW Trigger: CCAGCTGGAGGGAGACATGATACTACGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCCTATACGGCAGGGAGAGATATTCCTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 90 bp | CTCTCAATCACCAGCCCCATGGTGTTGGCAAACCTCTGCGGGGAGTaGGGCACCCTGGCAGGCAGGAGGAATATCTCTCCCTGCCGTATA | + |
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Preference number: 1 (lower is better) Translates to: LSITSPMVLANLCGE*GTLAGRRNISPCRI Trigger: TATACGGCAGGGAGAGATATTCCTCCTGCCTGCCAGGGTGCCCCACTCCCCGCAGAGGTTTGCCAACACCATGGGGCTGGTGATTGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 90 bp | AGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATTGCTCAGAGTaGAAGAACTCTTGGATGATGGGTGCTAACTGCGTGCCAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SSWSGLGFPVRYCSE*KNSWMMGANCVPRS Trigger: GGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 90 bp | ATGATGGACCGTGTATTCAGCGGGAATGGCAGCTCCTTGAGCAGCTaGTCAGGGTTGGGTTTTCCTGTTCGGTATTGCTCAGAGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: MMDRVFSGNGSSLSS*SGLGFPVRYCSEWK Trigger: CTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCTCAAGGAGCTGCCATTCCCGCTGAATACACGGTCCATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR GCA 90 bp | AGCTCCTTGAGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATTaGTCAGAGTGGAAGAACTCTTGGATGATGGGTGCTAACTGCGTG | + |
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Preference number: 1 (lower is better) Translates to: SSLSSWSGLGFPVRY*SEWKNSWMMGANCV Trigger: CACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCTCAAGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 90 bp | GATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATaGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCT | + |
|
Preference number: 1 (lower is better) Translates to: DAFIERFLSVRLLGT*GQCRAMAVRRSGTA Trigger: AGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| 3UTR CCA 90 bp | GGGTTGGGTTTTCCTGTTCGGTATTGCTCAGAGTGGAAGAACTCTTaGATGATGGGTGCTAACTGCGTGCCAAGGTCCTTACAGTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: GLGFPVRYCSEWKNS*MMGANCVPRSLQWN Trigger: GTTCCACTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR GCA 90 bp | CGGTATTGCTCAGAGTGGAAGAACTCTTGGATGATGGGTGCTAACTaGGTGCCAAGGTCCTTACAGTGGAACCATTTCTCGAAGAGGACA | + |
|
Preference number: 1 (lower is better) Translates to: RYCSEWKNSWMMGAN*VPRSLQWNHFSKRT Trigger: TGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 90 bp | TTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTaGGCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGG | + |
|
Preference number: 1 (lower is better) Translates to: FSRMPLLRDFLVSGC*AHGDSVGLWLLEDR Trigger: CCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| 3UTR TCA 90 bp | TGGGTTTTCCTGTTCGGTATTGCTCAGAGTGGAAGAACTCTTGGATaGTGGGTGCTAACTGCGTGCCAAGGTCCTTACAGTGGAACCATT | + |
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Preference number: 1 (lower is better) Translates to: WVFLFGIAQSGRTLG*WVLTACQGPYSGTI Trigger: AATGGTTCCACTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR GCA 90 bp | TCATTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTaGTGGGCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SFSRMPLLRDFLVSG*WAHGDSVGLWLLED Trigger: ATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| 3UTR-3UTR CCA 90 bp | AGCGGGAATGGCAGCTCCTTGAGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGAACCTCTGCGGGGAGTaGGGCACCCTGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGNGSSLSSWSGLGFPVRNLCGE*GTLAGR Trigger: CCTGCCTGCCAGGGTGCCCCACTCCCCGCAGAGGTT...CCGAACAGGAAAACCCAACCCTGACCAGCTGCTCAAGGAGCTGCCATTCCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATTGCTCAGAGTGGAAGAACTGGCACGTCCCGGTGTTaGCCCTGCTCCAGGACTCGT | + |
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Preference number: 2 (lower is better) Translates to: AAGQGWVFLFGIAQSGRTGTSRC*PCSRTR Trigger: ACGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCC...AGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTAGGAGTCTGGCATCCTGGGCTGAGCTAGGCAGGAGGGTTGATGCCAGTGCTGAAAGAGCTGTCTaGAAATGGGCAGCTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: CPRSLASWAELGRRVDASAERAV*KWAATR Trigger: CCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGC...ACTGGCATCAACCCTCCTGCCTAGCTCAGCCCAGGATGCCAGACTCCTAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGGTCCTTACAGTGGAACCATTTCTCGAAGAGGACATCCTCAGTGTCCCCTCCCGGTGTTGCCCCTaGTCCAGGACTCGTAGTATC | + |
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Preference number: 2 (lower is better) Translates to: AKVLTVEPFLEEDILSVPSRCCP*SRTRSI Trigger: GATACTACGAGTCCTGGAGCAGGGGCAACACCGGGA...GGGGACACTGAGGATGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGAAGAACTCTTGGATGATGGGTGCTAACTGCGTGCCAAGGTCCTTACAGCCAGCCCCATGGTGTTaGCAAACCTCTGCGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: EWKNSWMMGANCVPRSLQPAPWC*QTSAGS Trigger: ACTCCCCGCAGAGGTTTGCCAACACCATGGGGCTGG...CTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CAA 90 bp | ATGGGCTTCATGATGGACCGTGTATTCAGCGGGAATGGCAGCTCCTaGAGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: MGFMMDRVFSGNGSS*SSWSGLGFPVRYCS Trigger: TGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCTCAAGGAGCTGCCATTCCCGCTGAATACACGGTCCATCATGAAGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR GCA 72 bp | TCTCCCTGCCGTATAGGCACGTCCCGGTGTTGCCCCTaGTCCAGGACTCGTAGTATCATGTCTCCCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPCRIGTSRCCP*SRTRSIMSPSS Trigger: GCTGGAGGGAGACATGATACTACGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCCTATACGGCAGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR-3UTR CAA 90 bp | CGTGCCAAGGTCCTTACAGTGGAACCATTTCTCGAAGAGGACATCCTCAGTGTCAGGCACGTCCCGGTGTaGCCCCTGCTCCAGGACTCG | + |
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Preference number: 3 (lower is better) Translates to: RAKVLTVEPFLEEDILSVRHVPV*PLLQDS Trigger: CGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCCT...GACACTGAGGATGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTCCTTACAGTGGAACCATTTCTCGAAGAGGACATCCTCAGTGTCCCCCAACCAGCCCCATGGTGTaGGCAAACCTCTGCGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: QGPYSGTISRRGHPQCPPTSPMV*ANLCGE Trigger: CTCCCCGCAGAGGTTTGCCAACACCATGGGGCTGGT...TGGGGGACACTGAGGATGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR TCA 72 bp | GGCCATCCAGCCAGGCCTTCAATGACATGGGCTTCATaGTGGACCGTGTATTCAGCGGGAATGGCAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GHPARPSMTWAS*WTVYSAGMAAP Trigger: AGGAGCTGCCATTCCCGCTGAATACACGGTCCATCATGAAGCCCATGTCATTGAAGGCCTGGCTGGATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR TCA 72 bp | AAGCTCCCTGGAGTGGCCATCCAGCCAGGCCTTCAATaGCATGGGCTTCATGATGGACCGTGTATTCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: KLPGVAIQPGLQ*HGLHDGPCIQR Trigger: CCGCTGAATACACGGTCCATCATGAAGCCCATGTCATTGAAGGCCTGGCTGGATGGCCACTCCAGGGAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR GCA 72 bp | AATATCTCTCCCTGCCGTATAGGCACGTCCCGGTGTTaGCCCTGCTCCAGGACTCGTAGTATCATGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: NISPCRIGTSRC*PCSRTRSIMSP Trigger: GGGAGACATGATACTACGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCCTATACGGCAGGGAGAGATATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 72 bp | TGGAGATGCAATGAGGCTGAAAGAGCTGTCTGGAAATaGGCAGCTACCAGGTCATTACTCAGGCACCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: WRCNEAERAVWK*AATRSLLRHPV Trigger: CACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATTGCATCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| 3UTR GCA 72 bp | AGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATTaGTCAGAGTGGAAGAACTCTTGGATGATGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SSWSGLGFPVRY*SEWKNSWMMGA Trigger: AGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 72 bp | ATGATGGGTGCTAACTGCGTGCCAAGGTCCTTACAGTaGAACCATTTCTCGAAGAGGACATCCTCAGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: MMGANCVPRSLQ*NHFSKRTSSVS Trigger: GGACACTGAGGATGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGGCACGCAGTTAGCACCCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR TCA 72 bp | CTGTTCGGTATTGCTCAGAGTGGAAGAACTCTTGGATaGTGGGTGCTAACTGCGTGCCAAGGTCCTTACAGT | + |
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Preference number: 3 (lower is better) Translates to: LFGIAQSGRTLG*WVLTACQGPYS Trigger: ACTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR GCA 72 bp | TCAGAGTGGAAGAACTCTTGGATGATGGGTGCTAACTaGGTGCCAAGGTCCTTACAGTGGAACCATTTCTCG | + |
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Preference number: 3 (lower is better) Translates to: SEWKNSWMMGAN*VPRSLQWNHFS Trigger: CGAGAAATGGTTCCACTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| 3UTR CCA 72 bp | ATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATaGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCG | + |
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Preference number: 3 (lower is better) Translates to: IERFLSVRLLGT*GQCRAMAVRRS Trigger: CGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| 3UTR CCA 72 bp | TTTCCTGTTCGGTATTGCTCAGAGTGGAAGAACTCTTaGATGATGGGTGCTAACTGCGTGCCAAGGTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: FPVRYCSEWKNS*MMGANCVPRSL Trigger: TAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS-3UTR GCA 90 bp | TGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGCGTGTTGGCAAACCTCTaGGGGGAGTGGGGCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: WKWAATRSLLRHPVAAWGVLANL*GEWGTL Trigger: CAGGGTGCCCCACTCCCCGCAGAGGTTTGCCAACAC...GCCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR CCA 90 bp | GGCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCTGATAACCTCTGCGGGGAGTaGGGCACCCTGGCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GTWGQCRAMAVRRSGTADNLCGE*GTLAGR Trigger: CCTGCCTGCCAGGGTGCCCCACTCCCCGCAGAGGTT...ATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR CCA 90 bp | CTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGCTGCCTGAAGCTCCCTaGAGTGGCCATCCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LEMGSYQVITQAPCGCLGLPEAP*SGHPAR Trigger: CCTGGCTGGATGGCCACTCCAGGGAGCTTCAGGCAG...CCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR TCA 90 bp | GAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGAGGGATGTGCCTGCCTaGAGCTCCCTGGAGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ELSGNGQLPGHYSGTLWLRDVPA*SSLEWP Trigger: TGGCCACTCCAGGGAGCTTCAGGCAGGCACATCCCT...CAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR GCA 90 bp | TGTCCTAGGAGTCTGGCATCCTGGGCTGAGCTAGGCAGGAGGGTTGATGCCAGTCCTGCCTTGGGCCTTTaGTGCTACCTTGTCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CPRSLASWAELGRRVDASPALGL*CYLVRG Trigger: CCCACGGACAAGGTAGCAGCAAAGGCCCAAGGCAGG...ACTGGCATCAACCCTCCTGCCTAGCTCAGCCCAGGATGCCAGACTCCTAGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS-3UTR TCA 90 bp | ATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGCGCACACTTGTCCGTGGGCAATaGCCTCCTCACCCTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: MGSYQVITQAPCGCLGRTLVRGQ*PPHPLQ Trigger: TTGAAGAGGGTGAGGAGGTCATTGCCCACGGACAAG...TGTGCGCCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234214.2 |
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| CDS-3UTR GCA 90 bp | CTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGTCCCGGTGTTGCCCCTaGTCCAGGACTCGTAGTATC | + |
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Preference number: 4 (lower is better) Translates to: LEMGSYQVITQAPCGCLGSRCCP*SRTRSI Trigger: GATACTACGAGTCCTGGAGCAGGGGCAACACCGGGA...CCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR GCA 90 bp | CTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGGCCTTGGGCCTTTGCTaGTACCTTGTCCGTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LEMGSYQVITQAPCGCLGALGLC*YLVRGQ Trigger: TTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGC...CCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS-3UTR GCA 90 bp | GGCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCTGATCCTGCCTTGGGCCTTTaGTGCTACCTTGTCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GTWGQCRAMAVRRSGTADPALGL*CYLVRG Trigger: CCCACGGACAAGGTAGCAGCAAAGGCCCAAGGCAGG...ATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTAGGAGTCTGGCATCCTGGGCTGAGCTAGGCAGGAGGGTTGATGCCAGTCAATCACCAGCCCCATaGTGTTGGCAAACCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: CPRSLASWAELGRRVDASQSPAP*CWQTSA Trigger: CGCAGAGGTTTGCCAACACCATGGGGCTGGTGATTG...ACTGGCATCAACCCTCCTGCCTAGCTCAGCCCAGGATGCCAGACTCCTAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR CCA 90 bp | AGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCCAGCAGGCTGTCATCTaGGGCCAGGGCTATACACTG | + |
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Preference number: 4 (lower is better) Translates to: SCLEMGSYQVITQAPCGCQQAVI*GQGYTL Trigger: CAGTGTATAGCCCTGGCCCCAGATGACAGCCTGCTG...GCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTCAATCACCAGCCCCATGGTGTTGGCAAACCTCTGCGGGGAGTGGGGATTTTGAGCTGCTCCTaGTGCCTGCAGTGGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: PSLNHQPHGVGKPLRGVGILSCS*CLQWRG Trigger: ACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAAT...CCCCACTCCCCGCAGAGGTTTGCCAACACCATGGGGCTGGTGATTGAGAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS-3UTR GCA 90 bp | AATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGGGCACGTCCCGGTGTTaGCCCTGCTCCAGGACTCGT | + |
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Preference number: 4 (lower is better) Translates to: NEAERAVWKWAATRSLLRGTSRC*PCSRTR Trigger: ACGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCC...CCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR GCA 90 bp | GCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCTGATGGCCTTGGGCCTTTGCTaGTACCTTGTCCGTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: AHGDSVGLWLLEDRGLLMALGLC*YLVRGQ Trigger: TTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGC...CATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGCCGCCTTCTCTCAATCACCAGCCCCATGGTGTTGGCAAACCTCTGCGGAACATGATTTTGAGCTaGTCCTGGTGCCTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LQPPSLNHQPHGVGKPLRNMILS*SWCLQW Trigger: CCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTT...CCGCAGAGGTTTGCCAACACCATGGGGCTGGTGATTGAGAGAAGGCGGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS-3UTR CCA 90 bp | TGGAGATGCAATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCACCAGCCCCATGGTGTTaGCAAACCTCTGCGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: WRCNEAERAVWKWAATRSPAPWC*QTSAGS Trigger: ACTCCCCGCAGAGGTTTGCCAACACCATGGGGCTGG...TGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATTGCATCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR CCA 90 bp | AGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCAGCTCCTTGAGCAGCTaGTCAGGGTTGGGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLEMGSYQVITQAPCGCSSLSS*SGLGFP Trigger: AGGAAAACCCAACCCTGACCAGCTGCTCAAGGAGCT...GCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGCTGCTACCTTGTCCGTaGGCAATGACCTCCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LKELSGNGQLPGHYSGTLLLPCP*AMTSSP Trigger: GGGTGAGGAGGTCATTGCCCACGGACAAGGTAGCAG...CAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234214.2 |
||
| CDS-3UTR TCA 90 bp | AATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGGGAATGGCAGCTCCTTaGGCAGCTGGTCAGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEAERAVWKWAATRSLLRGMAAP*AAGQGW Trigger: CCAACCCTGACCAGCTGCTCAAGGAGCTGCCATTCC...CCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTAGGAGTCTGGCATCCTGGGCTGAGCTAGGCAGGAGGGTTGATGCCAGTTTGAGCTGCTCCTGGTaGATAAGCTTGTTGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CPRSLASWAELGRRVDASLSCSW*ISLLQT Trigger: GGTTTGCAACAAGCTTATGCACCAGGAGCAGCTCAA...ACTGGCATCAACCCTCCTGCCTAGCTCAGCCCAGGATGCCAGACTCCTAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | GCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGCGCACACAGGAGGATTTTGAGCTGCTCCTaGTGCATAAGCTTGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATRSLLRHPVAAWGAHRRILSCS*CISLLQ Trigger: TTGCAACAAGCTTATGCACCAGGAGCAGCTCAAAAT...CCTCCTGTGTGCGCCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | GCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCTGATGATCCACATCCTGCCTTaGGCCTTTGCTGCTACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGDSVGLWLLEDRGLLMIHILP*AFAATL Trigger: CAAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGGAT...CATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGATGCAATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCACAGCAGGCTGTCATCTaGGGCCAGGGCTATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: WRCNEAERAVWKWAATRSQQAVI*GQGYTL Trigger: CAGTGTATAGCCCTGGCCCCAGATGACAGCCTGCTG...TGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATTGCATCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATTGCTCAGAGTGGAAGAAACCCGAGTCAACTCCTaGGAAGGATGGGGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQLVRVGFSCSVLLRVEETRVNS*EGWGKQ Trigger: CTGCTTCCCCCATCCTTCCCAGGAGTTGACTCGGGT...TTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAAGAACTCTTGGATGATGGGTGCTAACTGCGTGCCAAGGTCCTTACAGGCTGCTCCTGGTGCCTaGAGTGGAGAGGTAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWKNSWMMGANCVPRSLQAAPGA*SGEVRR Trigger: TCTTCTTACCTCTCCACTGCAGGCACCAGGAGCAGC...CTGTAAGGACCTTGGCACGCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGCGCACAATTTTGAGCTGCTCCTaGTGCATAAGCTTGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MGSYQVITQAPCGCLGRTILSCS*CISLLQ Trigger: TTGCAACAAGCTTATGCACCAGGAGCAGCTCAAAAT...TGTGCGCCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCCAAGGTCCTTACAGTaGAACCATTTCTCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELSGNGQLPGHYSGTLWLPRSLQ*NHFSKR Trigger: CCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGG...CAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| 3UTR CAA 72 bp | GAGCAGCTGGTCAGGGTTGGGTTTTCCTGTTCGGTATaGCTCAGAGTGGAAGAACTCTTGGATGATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQLVRVGFSCSV*LRVEELLDDGC Trigger: GCACCCATCATCCAAGAGTTCTTCCACTCTGAGCAATACCGAACAGGAAAACCCAACCCTGACCAGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCAATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTAGGCCACAGAGCCTTGTaGTCGCTCCCACACATACGA | + |
|
Preference number: 4 (lower is better) Translates to: RCNEAERAVWKWAATRSLGHRAL*SLPHIR Trigger: TCGTATGTGTGGGAGCGAGCACAAGGCTCTGTGGCC...TAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATTGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATGGGGACAGTGTAGGGCTATGTATTCAGCGGGAATaGCAGCTCCTTGAGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRDFLVSGCWAHGDSVGLCIQRE*QLLEQL Trigger: CAGCTGCTCAAGGAGCTGCCATTCCCGCTGAATACA...TAGCCCTACACTGTCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CCA 90 bp | CGTGCCAAGGTCCTTACAGTGGAACCATTTCTCGAAGAGGACATCCTCAGTGTCAACTCCTGGGAAGGATaGGGGAAGCAGGGACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAKVLTVEPFLEEDILSVNSWEG*GKQGHK Trigger: CTTATGTCCCTGCTTCCCCCATCCTTCCCAGGAGTT...GACACTGAGGATGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATGGCCACAGAGCCTTGTaGTCGCTCCCACACATACGA | + |
|
Preference number: 4 (lower is better) Translates to: FSRMPLLRDFLVSGCWAHGHRAL*SLPHIR Trigger: TCGTATGTGTGGGAGCGAGCACAAGGCTCTGTGGCC...ATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGACACACATTAACAGGCCTTCTAACTCCCTGTGGCAACTGTTGTCCCCAATCCACATCCTGCCTTaGGCCTTTGCTGCTACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMTHINRPSNSLWQLLSPIHILP*AFAATL Trigger: CAAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGGAT...TGGGGACAACAGTTGCCACAGGGAGTTAGAAGGCCTGTTAATGTGTGTCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR GCA 90 bp | TTAACAGGCCTTCTAACTCCCTGTGGCAACTGTTGTCCCCAAGTAACACATGACCACACATCCACATCCTaGCTTGGGCCTTTGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LTGLLTPCGNCCPQVTHDHTSTS*LGPLLL Trigger: TAGCAGCAAAGGCCCAAGGCAGGATGTGGATGTGTG...GTCATGTGTTACTTGGGGACAACAGTTGCCACAGGGAGTTAGAAGGCCTGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CCA 90 bp | AATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGGCAGCTGGTCAGGGTTaGGTTTTCCTGTTCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NEAERAVWKWAATRSLLRAAGQG*VFLFGI Trigger: AATACCGAACAGGAAAACCCAACCCTGACCAGCTGC...CCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATCACACATCCACATCCTaGCTTGGGCCTTTGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSRMPLLRDFLVSGCWAHHTSTS*LGPLLL Trigger: TAGCAGCAAAGGCCCAAGGCAGGATGTGGATGTGTG...ATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCAATGAGGCTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTATTGAGCTGCTCCTGGTaGATAAGCTTGTTGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RCNEAERAVWKWAATRSLLSCSW*ISLLQT Trigger: GGTTTGCAACAAGCTTATGCACCAGGAGCAGCTCAA...TAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAGCCTCATTGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCAGCTGGTAAAACACCTGTTGTGTCCTCAGACAATTTGCTCCTTGTGTTTGAGCTGCTCCTGGTaGATAAGCTTGTTGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SLQLVKHLLCPQTICSLCLSCSW*ISLLQT Trigger: GGTTTGCAACAAGCTTATGCACCAGGAGCAGCTCAA...ACACAAGGAGCAAATTGTCTGAGGACACAACAGGTGTTTTACCAGCTGGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234312.2 |
||
| CDS-3UTR CCA 90 bp | TTAACAGGCCTTCTAACTCCCTGTGGCAACTGTTGTCCCCAAGTAACACATGACGAGTGGAAGAACTCTTaGATGATGGGTGCTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTGLLTPCGNCCPQVTHDEWKNS*MMGANC Trigger: GCAGTTAGCACCCATCATCCAAGAGTTCTTCCACTC...GTCATGTGTTACTTGGGGACAACAGTTGCCACAGGGAGTTAGAAGGCCTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CCA 90 bp | ATTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATGTGATAATCCTTCCTaGTATTGGGGCCTCCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: IQQDAFIERFLSVRLLGTCDNPS*YWGLQR Trigger: TCGTTGGAGGCCCCAATACCAGGAAGGATTATCACA...TGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTGGTAAAACACCTGTTGTGTCCTCAGACAATTTGCTCCTTGTGTGAATGTGATAATCCTTCCTaGTATTGGGGCCTCCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLVKHLLCPQTICSLCECDNPS*YWGLQR Trigger: TCGTTGGAGGCCCCAATACCAGGAAGGATTATCACA...TTCACACAAGGAGCAAATTGTCTGAGGACACAACAGGTGTTTTACCAGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234312.2 |
||
| CDS-3UTR CCA 90 bp | TTAACAGGCCTTCTAACTCCCTGTGGCAACTGTTGTCCCCAAGTAACACATGACCGGTATTGCTCAGAGTaGAAGAACTCTTGGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTGLLTPCGNCCPQVTHDRYCSE*KNSWMM Trigger: CATCATCCAAGAGTTCTTCCACTCTGAGCAATACCG...GTCATGTGTTACTTGGGGACAACAGTTGCCACAGGGAGTTAGAAGGCCTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTGGTAAAACACCTGTTGTGTCCTCAGACAATTTGCTCCTTGTGTGAAATTTTGAGCTGCTCCTaGTGCATAAGCTTGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQLVKHLLCPQTICSLCEILSCS*CISLLQ Trigger: TTGCAACAAGCTTATGCACCAGGAGCAGCTCAAAAT...TTCACACAAGGAGCAAATTGTCTGAGGACACAACAGGTGTTTTACCAGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234312.2 |
||
| CDS GCA 90 bp | CCAGCAGGCACCAGCAGGCTGTCATCTGGGGCCAGGGCTATACACTaGCCTCCCATTGTCACCTTAGAGGAGCCCTCCTGTTGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGTSRLSSGARAIH*PPIVTLEEPSCCHS Trigger: GCTGTGGCAACAGGAGGGCTCCTCTAAGGTGACAATGGGAGGGCAGTGTATAGCCCTGGCCCCAGATGACAGCCTGCTGGTGCCTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS GCA 90 bp | CTTACGGGCAGGGTCTTGTGTCACAGACAAGGCCACAGAGCCTTGTaGTCGCTCCCACACATACGAGGTTCCAGCAGGCACCAGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGRVLCHRQGHRAL*SLPHIRGSSRHQQA Trigger: AGCCTGCTGGTGCCTGCTGGAACCTCGTATGTGTGGGAGCGAGCACAAGGCTCTGTGGCCTTGTCTGTGACACAAGACCCTGCCCGTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGAGGCACGTCCCGGTGTaGCCCCTGCTCCAGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LKELSGNGQLPGHYSGTLRHVPV*PLLQDS Trigger: CGAGTCCTGGAGCAGGGGCAACACCGGGACGTGCCT...CAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGTGGCTGCTTGGGGCGCACACTTACGGGCAGGGTCTaGTGTCACAGACAAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MGSYQVITQAPCGCLGRTLTGRV*CHRQGH Trigger: GTGGCCTTGTCTGTGACACAAGACCCTGCCCGTAAG...TGTGCGCCCCAAGCAGCCACAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS TCA 90 bp | GCCTGCCTGAAGCTCCCTGGAGTGGCCATCCAGCCAGGCCTTCAATaGCATGGGCTTCATGATGGACCGTGTATTCAGCGGGAATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ACLKLPGVAIQPGLQ*HGLHDGPCIQREWQ Trigger: CTGCCATTCCCGCTGAATACACGGTCCATCATGAAGCCCATGTCATTGAAGGCCTGGCTGGATGGCCACTCCAGGGAGCTTCAGGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS CCA 90 bp | CTCCCACACATACGAGGTTCCAGCAGGCACCAGCAGGCTGTCATCTaGGGCCAGGGCTATACACTGCCCTCCCATTGTCACCTTAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPHIRGSSRHQQAVI*GQGYTLPSHCHLRG Trigger: TCCTCTAAGGTGACAATGGGAGGGCAGTGTATAGCCCTGGCCCCAGATGACAGCCTGCTGGTGCCTGCTGGAACCTCGTATGTGTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS TCA 90 bp | CCACATCCTGCCTTGGGCCTTTGCTGCTACCTTGTCCGTGGGCAATaGCCTGGGTCTCATAGCTGTCCCCAAACAGGCTTAGGGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPALGLCCYLVRGQ*PGSHSCPQTGLGMC Trigger: GCACATCCCTAAGCCTGTTTGGGGACAGCTATGAGACCCAGGTCATTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTAGGAGTCTGGCATCCTGGGCTGAGCTAGGCAGGAGGGTTGATGCCAGTCATCCACATCCTGCCTaGGGCCTTTGCTGCTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: CPRSLASWAELGRRVDASHPHPA*GLCCYL Trigger: AAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGGATG...ACTGGCATCAACCCTCCTGCCTAGCTCAGCCCAGGATGCCAGACTCCTAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGGGGAATGGCAGCTCCTaGAGCAGCTGGTCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKELSGNGQLPGHYSGTLGNGSS*SSWSGL Trigger: CAACCCTGACCAGCTGCTCAAGGAGCTGCCATTCCC...CAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CAA 90 bp | GGCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCTGATCAAGGCCACAGAGCCTaGTGCTCGCTCCCACACATA | + |
|
Preference number: 5 (lower is better) Translates to: GTWGQCRAMAVRRSGTADQGHRA*CSLPHI Trigger: TATGTGTGGGAGCGAGCACAAGGCTCTGTGGCCTTG...ATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS CCA 90 bp | TGGTGCCTGCAGTGGAGAGGTAAGAAGAGAACCCGAGTCAACTCCTaGGAAGGATGGGGGAAGCAGGGACATAAGCTTGTTGCAAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: WCLQWRGKKRTRVNS*EGWGKQGHKLVANR Trigger: CCGGTTTGCAACAAGCTTATGTCCCTGCTTCCCCCATCCTTCCCAGGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTGCAGGCACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS CCA 90 bp | GGGCCTCCAACGAACATGATTTTGAGCTGCTCCTGGTGCCTGCAGTaGAGAGGTAAGAAGAGAACCCGAGTCAACTCCTGGGAAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GPPTNMILSCSWCLQ*RGKKRTRVNSWEGW Trigger: CCATCCTTCCCAGGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS-3UTR CAA 90 bp | CAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATGGGGAACCAGCCCCATGGTGTaGGCAAACCTCTGCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QDAFIERFLSVRLLGTWGTSPMV*ANLCGE Trigger: CTCCCCGCAGAGGTTTGCCAACACCATGGGGCTGGT...TCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
||
| CDS-3UTR CAA 90 bp | GGCACATGGGGACAGTGTAGGGCTATGGCTGTTAGAAGATCGGGGACTGCTGATCATCCACATCCTGCCTaGGGCCTTTGCTGCTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTWGQCRAMAVRRSGTADHPHPA*GLCCYL Trigger: AAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGGATG...ATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCCTACACTGTCCCCATGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGCAAGGCCACAGAGCCTaGTGCTCGCTCCCACACATA | + |
|
Preference number: 5 (lower is better) Translates to: LKELSGNGQLPGHYSGTLQGHRA*CSLPHI Trigger: TATGTGTGGGAGCGAGCACAAGGCTCTGTGGCCTTG...CAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS GCA 90 bp | CTGGTATTGGGGCCTCCAACGAACATGATTTTGAGCTGCTCCTGGTaGCTGCAGTGGAGAGGTAAGAAGAGAACCCGAGTCAACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLGPPTNMILSCSW*LQWRGKKRTRVNSW Trigger: CCAGGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCCCAATACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACATGGGGACAGTGTAGGGCTACTTACGGGCAGGGTCTaGTGTCACAGACAAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRDFLVSGCWAHGDSVGLLTGRV*CHRQGH Trigger: GTGGCCTTGTCTGTGACACAAGACCCTGCCCGTAAG...TAGCCCTACACTGTCCCCATGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
||
| CDS TCA 90 bp | CCACATCCTGCCTTGGGCCTTTGCTGCTACCTTGTCCGTGGGCAATaGCCTCCTCACCCTCTTCAATGTGATAATCCTTCCTGGTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPALGLCCYLVRGQ*PPHPLQCDNPSWYW Trigger: CCAATACCAGGAAGGATTATCACATTGAAGAGGGTGAGGAGGTCATTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234214.2 |
||
| CDS CCA 90 bp | CAGTGGAGAGGTAAGAAGAGAACCCGAGTCAACTCCTGGGAAGGATaGGGGAAGCAGGGACATAAGCTTGTTGCAAACCGGAGGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QWRGKKRTRVNSWEG*GKQGHKLVANRRLK Trigger: TTTCAGCCTCCGGTTTGCAACAAGCTTATGTCCCTGCTTCCCCCATCCTTCCCAGGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS CCA 90 bp | TTCCTGGTATTGGGGCCTCCAACGAACATGATTTTGAGCTGCTCCTaGTGCCTGCAGTGGAGAGGTAAGAAGAGAACCCGAGTCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: FLVLGPPTNMILSCS*CLQWRGKKRTRVNS Trigger: GGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCCCAATACCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS TCA 90 bp | AAGGATGGGGGAAGCAGGGACATAAGCTTGTTGCAAACCGGAGGCTaGAAGGAGGCCCGATTCTCTTCTACCCAAGACTTCACTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: KDGGSRDISLLQTGG*KEARFSSTQDFTLT Trigger: TGTGAGAGTGAAGTCTTGGGTAGAAGAGAATCGGGCCTCCTTTCAGCCTCCGGTTTGCAACAAGCTTATGTCCCTGCTTCCCCCATCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS-3UTR CAA 90 bp | CGTGCCAAGGTCCTTACAGTGGAACCATTTCTCGAAGAGGACATCCTCAGTGTCCCAACGAACATGATTTaGAGCTGCTCCTGGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RAKVLTVEPFLEEDILSVPTNMI*SCSWCL Trigger: CAGGCACCAGGAGCAGCTCAAAATCATGTTCGTTGG...GACACTGAGGATGTCCTCTTCGAGAAATGGTTCCACTGTAAGGACCTTGGCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAGCTGTCTGGAAATGGGCAGCTACCAGGTCATTACTCAGGCACCCTGCCAACGAACATGATTTaGAGCTGCTCCTGGTGCATA | + |
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Preference number: 5 (lower is better) Translates to: LKELSGNGQLPGHYSGTLPTNMI*SCSWCI Trigger: TATGCACCAGGAGCAGCTCAAAATCATGTTCGTTGG...CAGGGTGCCTGAGTAATGACCTGGTAGCTGCCCATTTCCAGACAGCTCTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS TCA 90 bp | ATTTTGAGCTGCTCCTGGTGCATAAGCTTGTTGCAAACCGGAGGCTaGAAGGAGGCCCGATTCTCTTCTACCCAAGACTTCACTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: ILSCSWCISLLQTGG*KEARFSSTQDFTLT Trigger: TGTGAGAGTGAAGTCTTGGGTAGAAGAGAATCGGGCCTCCTTTCAGCCTCCGGTTTGCAACAAGCTTATGCACCAGGAGCAGCTCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 ENSMUST00000234312.2 |
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| CDS-3UTR CAA 90 bp | ATTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACAAGCAGCTGGTCAGGGTaGGGTTTTCCTGTTCGGTAT | + |
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Preference number: 5 (lower is better) Translates to: IQQDAFIERFLSVRLLGTSSWSG*GFPVRY Trigger: ATACCGAACAGGAAAACCCAACCCTGACCAGCTGCT...TGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS-3UTR CAA 90 bp | ATTCAGCAGGATGCCTTTATTGAGAGATTTCTTAGTGTCAGGCTGCTGGGCACACCAACGAACATGATTTaGAGCTGCTCCTGGTGCATA | + |
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Preference number: 5 (lower is better) Translates to: IQQDAFIERFLSVRLLGTPTNMI*SCSWCI Trigger: TATGCACCAGGAGCAGCTCAAAATCATGTTCGTTGG...TGTGCCCAGCAGCCTGACACTAAGAAATCTCTCAATAAAGGCATCCTGCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS-3UTR CAA 90 bp | CTCCAGCTGGTAAAACACCTGTTGTGTCCTCAGACAATTTGCTCCTTGTGTGAACCAACGAACATGATTTaGAGCTGCTCCTGGTGCATA | + |
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Preference number: 5 (lower is better) Translates to: LQLVKHLLCPQTICSLCEPTNMI*SCSWCI Trigger: TATGCACCAGGAGCAGCTCAAAATCATGTTCGTTGG...TTCACACAAGGAGCAAATTGTCTGAGGACACAACAGGTGTTTTACCAGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234312.2 |
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| CDS GCA 72 bp | GGGTCTCATAGCTGTCCCCAAACAGGCTTAGGGATGTaGCTGCCTGAAGCTCCCTGGAGTGGCCATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSHSCPQTGLGM*LPEAPWSGHPA Trigger: GGCTGGATGGCCACTCCAGGGAGCTTCAGGCAGGCACATCCCTAAGCCTGTTTGGGGACAGCTATGAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS GCA 72 bp | ACCAGCAGGCTGTCATCTGGGGCCAGGGCTATACACTaGCCTCCCATTGTCACCTTAGAGGAGCCCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: TSRLSSGARAIH*PPIVTLEEPSC Trigger: ACAGGAGGGCTCCTCTAAGGTGACAATGGGAGGGCAGTGTATAGCCCTGGCCCCAGATGACAGCCTGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS CCA 72 bp | ATACGAGGTTCCAGCAGGCACCAGCAGGCTGTCATCTaGGGCCAGGGCTATACACTGCCCTCCCATTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: IRGSSRHQQAVI*GQGYTLPSHCH Trigger: GTGACAATGGGAGGGCAGTGTATAGCCCTGGCCCCAGATGACAGCCTGCTGGTGCCTGCTGGAACCTCGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 |
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| CDS CCA 72 bp | CAAACAGGCTTAGGGATGTGCCTGCCTGAAGCTCCCTaGAGTGGCCATCCAGCCAGGCCTTCAATGACATGG | + |
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Preference number: 6 (lower is better) Translates to: QTGLGMCLPEAP*SGHPARPSMTW Trigger: CCATGTCATTGAAGGCCTGGCTGGATGGCCACTCCAGGGAGCTTCAGGCAGGCACATCCCTAAGCCTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS TCA 72 bp | GCCTTGGGCCTTTGCTGCTACCTTGTCCGTGGGCAATaGCCTGGGTCTCATAGCTGTCCCCAAACAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: ALGLCCYLVRGQ*PGSHSCPQTGL Trigger: TAAGCCTGTTTGGGGACAGCTATGAGACCCAGGTCATTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS CAA 72 bp | CACATCCACATCCTGCCTTGGGCCTTTGCTGCTACCTaGTCCGTGGGCAATGACCTGGGTCTCATAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HIHILPWAFAAT*SVGNDLGLIAV Trigger: GACAGCTATGAGACCCAGGTCATTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000687.9 |
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| CDS CAA 72 bp | CACATCCACATCCTGCCTTGGGCCTTTGCTGCTACCTaGTCCGTGGGCAATGACCTCCTCACCCTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HIHILPWAFAAT*SVGNDLLTLFN Trigger: ATTGAAGAGGGTGAGGAGGTCATTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGCAGGATGTGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234214.2 |
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| CDS TCA 72 bp | GCCTTGGGCCTTTGCTGCTACCTTGTCCGTGGGCAATaGCCTCCTCACCCTCTTCAATGTGATAATCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALGLCCYLVRGQ*PPHPLQCDNPS Trigger: GGAAGGATTATCACATTGAAGAGGGTGAGGAGGTCATTGCCCACGGACAAGGTAGCAGCAAAGGCCCAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234214.2 |
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| CDS CCA 72 bp | TTGGGGCCTCCAACGAACATGATTTTGAGCTGCTCCTaGTGCCTGCAGTGGAGAGGTAAGAAGAGAACCCGA | + |
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Preference number: 6 (lower is better) Translates to: LGPPTNMILSCS*CLQWRGKKRTR Trigger: TCGGGTTCTCTTCTTACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS CAA 72 bp | TCCTTCCTGGTATTGGGGCCTCCAACGAACATGATTTaGAGCTGCTCCTGGTGCCTGCAGTGGAGAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SFLVLGPPTNMI*SCSWCLQWRGK Trigger: CTTACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCCCAATACCAGGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS TCA 72 bp | TGCTCCTGGTGCATAAGCTTGTTGCAAACCGGAGGCTaGAAGGAGGCCCGATTCTCTTCTACCCAAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: CSWCISLLQTGG*KEARFSSTQDF Trigger: GAAGTCTTGGGTAGAAGAGAATCGGGCCTCCTTTCAGCCTCCGGTTTGCAACAAGCTTATGCACCAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 ENSMUST00000234312.2 |
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| CDS TCA 72 bp | GGAAGCAGGGACATAAGCTTGTTGCAAACCGGAGGCTaGAAGGAGGCCCGATTCTCTTCTACCCAAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: GSRDISLLQTGG*KEARFSSTQDF Trigger: GAAGTCTTGGGTAGAAGAGAATCGGGCCTCCTTTCAGCCTCCGGTTTGCAACAAGCTTATGTCCCTGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS GCA 72 bp | CTGGTATTGGGGCCTCCAACGAACATGATTTTGAGCTaGTCCTGGTGCATAAGCTTGTTGCAAACCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LVLGPPTNMILS*SWCISLLQTGG Trigger: GCCTCCGGTTTGCAACAAGCTTATGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCCCAATACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 ENSMUST00000234312.2 |
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| CDS CCA 72 bp | CAGTGGAGAGGTAAGAAGAGAACCCGAGTCAACTCCTaGGAAGGATGGGGGAAGCAGGGACATAAGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: QWRGKKRTRVNS*EGWGKQGHKLV Trigger: AACAAGCTTATGTCCCTGCTTCCCCCATCCTTCCCAGGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS CCA 72 bp | ACGAACATGATTTTGAGCTGCTCCTGGTGCCTGCAGTaGAGAGGTAAGAAGAGAACCCGAGTCAACTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TNMILSCSWCLQ*RGKKRTRVNSW Trigger: CCAGGAGTTGACTCGGGTTCTCTTCTTACCTCTCCACTGCAGGCACCAGGAGCAGCTCAAAATCATGTTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234863.2 |
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| CDS CAA 72 bp | TCCTTCCTGGTATTGGGGCCTCCAACGAACATGATTTaGAGCTGCTCCTGGTGCATAAGCTTGTTGCAAACC | + |
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Preference number: 6 (lower is better) Translates to: SFLVLGPPTNMI*SCSWCISLLQT Trigger: GGTTTGCAACAAGCTTATGCACCAGGAGCAGCTCAAAATCATGTTCGTTGGAGGCCCCAATACCAGGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000687.9 ENSMUST00000234214.2 ENSMUST00000234312.2 |
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