Pregenerated sensors for H60C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091618Ensembl transcript IDs: ENSMUST00000170893.3, ENSMUST00000216211.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGACTCAGTAGTGACAGCTGCCCAGGACCTTCCAGATTTCACTaGCAGATTGCCACTGCAGGGGCAACCAGCCTGTCGGACAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: CGLSSDSCPGPSRFH*QIATAGATSLSDRA Trigger: TGCTCTGTCCGACAGGCTGGTTGCCCCTGCAGTGGCAATCTGGCAGTGAAATCTGGAAGGTCCTGGGCAGCTGTCACTACTGAGTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR TCA 90 bp | GTATGTGCACAAAGAAGATGCTCTCAGCACAGGGGAAAGCAACACTaGCCCAGAACCTGCATCAGAGGGTGTGGACTCAGTAGTGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: VCAQRRCSQHRGKQH*PRTCIRGCGLSSDS Trigger: GCTGTCACTACTGAGTCCACACCCTCTGATGCAGGTTCTGGGTCAGTGTTGCTTTCCCCTGTGCTGAGAGCATCTTCTTTGTGCACATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR GCA 90 bp | GAGAACAATCGTGAGTTCACTCTCCTGTACCACAGCTTCTGTATGTaGACAAAGAAGATGCTCTCAGCACAGGGGAAAGCAACACTGACC | + |
|
Preference number: 1 (lower is better) Translates to: ENNREFTLLYHSFCM*TKKMLSAQGKATLT Trigger: GGTCAGTGTTGCTTTCCCCTGTGCTGAGAGCATCTTCTTTGTGCACATACAGAAGCTGTGGTACAGGAGAGTGAACTCACGATTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR TCA 90 bp | GTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAACCTGTaGTTAGCAAGGGCCACAGTGCCTAGCACACAGTGGAAAGGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: VIACYGQITQRKRNL*LARATVPSTQWKGL Trigger: AAGGCCTTTCCACTGTGTGCTAGGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR GCA 90 bp | GCCAGCGGTAAGAGCCTTCTAGTAAGGAAACTGCAGAAAGGACATTaGTGTTCTAGGGGAATTCAGCCAAGAAGAATGCTCCGATGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: ASGKSLLVRKLQKGH*CSRGIQPRRMLRCF Trigger: AAAACATCGGAGCATTCTTCTTGGCTGAATTCCCCTAGAACAGCAATGTCCTTTCTGCAGTTTCCTTACTAGAAGGCTCTTACCGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR TCA 90 bp | AGCTTTAACCAGGGAGATCTTTTAAGCACAAAAACCATTCTGGGTTaGTATACTTCAGTTGCCAGGAAGTTAGTCAGAAGCAGAACTACA | + |
|
Preference number: 1 (lower is better) Translates to: SFNQGDLLSTKTILG*YTSVARKLVRSRTT Trigger: TGTAGTTCTGCTTCTGACTAACTTCCTGGCAACTGAAGTATATCAACCCAGAATGGTTTTTGTGCTTAAAAGATCTCCCTGGTTAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR GCA 90 bp | GTCAGAGAGAACAATCGTGAGTTCACTCTCCTGTACCACAGCTTCTGTATGTGCCTCAGTAGTGACAGCTaGCCAGGACCTTCCAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: VRENNREFTLLYHSFCMCLSSDS*PGPSRF Trigger: AAATCTGGAAGGTCCTGGGCAGCTGTCACTACTGAG...GCACATACAGAAGCTGTGGTACAGGAGAGTGAACTCACGATTGTTCTCTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR GCA 90 bp | ACATCCAGAGCCAGCGGTAAGAGCCTTCTAGTAAGGAAACTGCAGAAAGGACATTGTGCACAAAGAAGATaGTCTCAGCACAGGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TSRASGKSLLVRKLQKGHCAQRR*SQHRGK Trigger: CTTTCCCCTGTGCTGAGAGCATCTTCTTTGTGCACA...ATGTCCTTTCTGCAGTTTCCTTACTAGAAGGCTCTTACCGCTGGCTCTGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTGCACAAAGAAGATGCTCTCAGCACAGGGGAAAGCAACACTGACCCAGGTGCCTAGCACACAGTaGAAAGGCCTTGAAATACTA | + |
|
Preference number: 2 (lower is better) Translates to: CMCTKKMLSAQGKATLTQVPSTQ*KGLEIL Trigger: TAGTATTTCAAGGCCTTTCCACTGTGTGCTAGGCAC...CTGGGTCAGTGTTGCTTTCCCCTGTGCTGAGAGCATCTTCTTTGTGCACATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGACAAATCACCCAGAGAAAAAGGAACCTGTGATTAGCAAGGGCCACAGTGCCACAGTGGAAAGGCCTTaGAATACTATGTCTGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: WTNHPEKKEPVISKGHSATVERP*NTMSVA Trigger: TGCTACAGACATAGTATTTCAAGGCCTTTCCACTGT...GGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATCCAGAGCCAGCGGTAAGAGCCTTCTAGTAAGGAAACTGCAGAAAGGACATCACAGCTTCTGTATGTaGACAAAGAAGATGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSRASGKSLLVRKLQKGHHSFCM*TKKMLS Trigger: TGAGAGCATCTTCTTTGTGCACATACAGAAGCTGTG...ATGTCCTTTCTGCAGTTTCCTTACTAGAAGGCTCTTACCGCTGGCTCTGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTAATTACTTTATTTCCTGTTTGCAGTCTCCCTTCCGTGCTTCCTCCACTACCGCACTTGTGCAAAAGTaGCTATGCCGAGGTCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: INYFISCLQSPFRASSTTALVQK*LCRGQR Trigger: TCTCTGACCTCGGCATAGGCACTTTTGCACAAGTGC...GGTAGTGGAGGAAGCACGGAAGGGAGACTGCAAACAGGAAATAAAGTAATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR CAA 90 bp | CAGGAAGTTAGTCAGAAGCAGAACTACAAAAGCCAAAGAGCAAAGTaGTTGCAATTAGAGACATCTCAGAACCATGGACTTTGGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: QEVSQKQNYKSQRAK*LQLETSQNHGLWWM Trigger: CATCCACCAAAGTCCATGGTTCTGAGATGTCTCTAATTGCAACAACTTTGCTCTTTGGCTTTTGTAGTTCTGCTTCTGACTAACTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAACTCTTTATTAGCTGGCCCTGATTATTCTAAATTTTTGGCGTTCCAGTATCAAGGTGTTTTTCTGTaGGGTCCAGGCCAGCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: RNSLLAGPDYSKFLAFQYQGVFL*GPGQPC Trigger: ACAAGGCTGGCCTGGACCTCACAGAAAAACACCTTG...ATACTGGAACGCCAAAAATTTAGAATAATCAGGGCCAGCTAATAAAGAGTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGCGTTCCAGTATAGAATGGAGCTTTAACCAGGGAGATCTTTTAAGCACAAAACATTTTGGCTGTAGGTaGTGTCTGTGTGCTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: WRSSIEWSFNQGDLLSTKHFGCR*CLCAEF Trigger: AAACTCAGCACACAGACATCACCTACAGCCAAAATG...TTTTGTGCTTAAAAGATCTCCCTGGTTAAAGCTCCATTCTATACTGGAACGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGAGATCCATTTAAAGATACAAGTCAGCAGTTAGACATCCAGAGCCAGCGGGCACAAAAACCATTCTaGGTTGATATACTTCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ERDPFKDTSQQLDIQSQRAQKPF*VDILQL Trigger: CAACTGAAGTATATCAACCCAGAATGGTTTTTGTGC...CCGCTGGCTCTGGATGTCTAACTGCTGACTTGTATCTTTAAATGGATCTCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR TCA 90 bp | TATACTTCAGTTGCCAGGAAGTTAGTCAGAAGCAGAACTACAAAAGCCAAAGAGACAGTGGAAAGGCCTTaGAATACTATGTCTGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YTSVARKLVRSRTTKAKETVERP*NTMSVA Trigger: TGCTACAGACATAGTATTTCAAGGCCTTTCCACTGT...CTCTTTGGCTTTTGTAGTTCTGCTTCTGACTAACTTCCTGGCAACTGAAGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAACGTGCCTAGCACACAGTaGAAAGGCCTTGAAATACTA | + |
|
Preference number: 2 (lower is better) Translates to: SLDQVIACYGQITQRKRNVPSTQ*KGLEIL Trigger: TAGTATTTCAAGGCCTTTCCACTGTGTGCTAGGCAC...GTTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR GCA 72 bp | CAGCTGCCCAGGACCTTCCAGATTTCACTGCCAGATTaGCACTGCAGGGGCAACCAGCCTGTCGGACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLPRTFQISLPD*HCRGNQPVGQS Trigger: GCTCTGTCCGACAGGCTGGTTGCCCCTGCAGTGGCAATCTGGCAGTGAAATCTGGAAGGTCCTGGGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR GCA 72 bp | CCCAGGACCTTCCAGATTTCACTGCCAGATTGCCACTaGAGGGGCAACCAGCCTGTCGGACAGAGCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRTFQISLPDCH*RGNQPVGQSRF Trigger: GAACCTGCTCTGTCCGACAGGCTGGTTGCCCCTGCAGTGGCAATCTGGCAGTGAAATCTGGAAGGTCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR GCA 72 bp | AGTAGTGACAGCTGCCCAGGACCTTCCAGATTTCACTaGCAGATTGCCACTGCAGGGGCAACCAGCCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SSDSCPGPSRFH*QIATAGATSLS Trigger: CGACAGGCTGGTTGCCCCTGCAGTGGCAATCTGGCAGTGAAATCTGGAAGGTCCTGGGCAGCTGTCACTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR GCA 72 bp | CAGCCTGTCGGACAGAGCAGGTTCCAAGTTCTCTGCTaGACCAGTGTACATGTGGCCATGGCTGGGCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: QPVGQSRFQVLC*TSVHVAMAGLL Trigger: AAGTAGCCCAGCCATGGCCACATGTACACTGGTGCAGCAGAGAACTTGGAACCTGCTCTGTCCGACAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR GCA 72 bp | ACCTGCATCAGAGGGTGTGGACTCAGTAGTGACAGCTaGCCAGGACCTTCCAGATTTCACTGCCAGATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TCIRGCGLSSDS*PGPSRFHCQIA Trigger: GGCAATCTGGCAGTGAAATCTGGAAGGTCCTGGGCAGCTGTCACTACTGAGTCCACACCCTCTGATGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR TCA 72 bp | CAAAGAAGATGCTCTCAGCACAGGGGAAAGCAACACTaGCCCAGAACCTGCATCAGAGGGTGTGGACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QRRCSQHRGKQH*PRTCIRGCGLS Trigger: ACTGAGTCCACACCCTCTGATGCAGGTTCTGGGTCAGTGTTGCTTTCCCCTGTGCTGAGAGCATCTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR CCA 72 bp | CAGTGGCTGCACCCGATGAATTGTCACGACTTTCTCTaGAGCATCTTCACCCTGTCTCTGTCAAGAATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QWLHPMNCHDFL*SIFTLSLSRIL Trigger: GAGAATTCTTGACAGAGACAGGGTGAAGATGCTCCAGAGAAAGTCGTGACAATTCATCGGGTGCAGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR TCA 72 bp | TGTTATGGACAAATCACCCAGAGAAAAAGGAACCTGTaGTTAGCAAGGGCCACAGTGCCTAGCACACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CYGQITQRKRNL*LARATVPSTQW Trigger: CCACTGTGTGCTAGGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCATAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGACAAATCACCCAGAGAAAAAGGAACCTGTGATTAGCAAGGGCCACAGTGCCCACAGTGGAAAGGCCTaGAAATACTATGTCTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: WTNHPEKKEPVISKGHSAHSGKA*KYYVCS Trigger: GCTACAGACATAGTATTTCAAGGCCTTTCCACTGTG...GGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGAGATCCATTTAAAGATACAAGTCAGCAGTTAGACATCCAGAGCCAGCGGAGCCAAAGAGCAAAGTaGTTGCAATTAGAGACATCT | + |
|
Preference number: 3 (lower is better) Translates to: ERDPFKDTSQQLDIQSQRSQRAK*LQLETS Trigger: AGATGTCTCTAATTGCAACAACTTTGCTCTTTGGCT...CCGCTGGCTCTGGATGTCTAACTGCTGACTTGTATCTTTAAATGGATCTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGTTCCAGTATAGAATGGAGCTTTAACCAGGGAGATCTTTTAAGCACAAAACAAAGAGCAAAGTTGTaGCAATTAGAGACATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WRSSIEWSFNQGDLLSTKQRAKL*QLETSQ Trigger: CTGAGATGTCTCTAATTGCAACAACTTTGCTCTTTG...TTTTGTGCTTAAAAGATCTCCCTGGTTAAAGCTCCATTCTATACTGGAACGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR GCA 72 bp | AAGCACAAAAACCATTCTGGGTTGATATACTTCAGTTaGCAGGAAGTTAGTCAGAAGCAGAACTACAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KHKNHSGLIYFS*QEVSQKQNYKS Trigger: GCTTTTGTAGTTCTGCTTCTGACTAACTTCCTGGCAACTGAAGTATATCAACCCAGAATGGTTTTTGTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR CCA 72 bp | AGCAAAGTTGTTGCAATTAGAGACATCTCAGAACCATaGACTTTGGTGGATGAGGTCTTTGTTTTCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SKVVAIRDISEP*TLVDEVFVFIL Trigger: CAAAATGAAAACAAAGACCTCATCCACCAAAGTCCATGGTTCTGAGATGTCTCTAATTGCAACAACTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR CCA 72 bp | CTGATTATTCTAAATTTTTGGCGTTCCAGTATAGAATaGAGCTTTAACCAGGGAGATCTTTTAAGCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LIILNFWRSSIE*SFNQGDLLSTK Trigger: TTTTGTGCTTAAAAGATCTCCCTGGTTAAAGCTCCATTCTATACTGGAACGCCAAAAATTTAGAATAATCAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR CAA 72 bp | ACAGCTGCCCAGGACCTTCCAGATTTCACTGCCAGATaGCCACTGCAGGGGCAACCAGCCTGTCGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAAQDLPDFTAR*PLQGQPACRTE Trigger: CTCTGTCCGACAGGCTGGTTGCCCCTGCAGTGGCAATCTGGCAGTGAAATCTGGAAGGTCCTGGGCAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR GCA 90 bp | GCACACAGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGAGGCTGGTCCACATGTaGAGCAGTGGTTGGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHSGKALKYYVCSMMSHMRLVHM*SSGWQG Trigger: ACCTTGCCAACCACTGCTGCACATGTGGACCAGCCT...CATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACTGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR GCA 90 bp | ATTAATTACTTTATTTCCTGTTTGCAGTCTCCCTTCCGTGCTTCCTCCACTACCCAAAGGGGCTGGACTTaGATGCCATGGATCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: INYFISCLQSPFRASSTTQRGWT*MPWIEA Trigger: AGCCTCGATCCATGGCATGCAAGTCCAGCCCCTTTG...GGTAGTGGAGGAAGCACGGAAGGGAGACTGCAAACAGGAAATAAAGTAATTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR CCA 90 bp | TGGACAAATCACCCAGAGAAAAAGGAACCTGTGATTAGCAAGGGCCACAGTGCCTCTTCCACTGCTCCATaGCACTGCTGTTATCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WTNHPEKKEPVISKGHSASSTAP*HCCYQN Trigger: ATTCTGATAACAGCAGTGCCATGGAGCAGTGGAAGA...GGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CCA 90 bp | TGGACAAATCACCCAGAGAAAAAGGAACCTGTGATTAGCAAGGGCCACAGTGCCAGTGGTTGGCAAGGTTaGCATTTCTCTAAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTNHPEKKEPVISKGHSASGWQG*HFSKVW Trigger: CCACACTTTAGAGAAATGCCAACCTTGCCAACCACT...GGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGAGAACAATCGTGAGTTCACTCTCCTGTACCACAGCTTCTGTATGTGCTTCTTGTTCTTCCACTaGTCCATGGCACTGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VRENNREFTLLYHSFCMCFLFFH*SMALLL Trigger: TAACAGCAGTGCCATGGAGCAGTGGAAGAACAAGAA...GCACATACAGAAGCTGTGGTACAGGAGAGTGAACTCACGATTGTTCTCTCTGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR CCA 90 bp | ACATCCAGAGCCAGCGGTAAGAGCCTTCTAGTAAGGAAACTGCAGAAAGGACATAGTGGTTGGCAAGGTTaGCATTTCTCTAAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSRASGKSLLVRKLQKGHSGWQG*HFSKVW Trigger: CCACACTTTAGAGAAATGCCAACCTTGCCAACCACT...ATGTCCTTTCTGCAGTTTCCTTACTAGAAGGCTCTTACCGCTGGCTCTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| 3UTR CAA 72 bp | CAAGGGCCACAGTGCCTAGCACACAGTGGAAAGGCCTaGAAATACTATGTCTGTAGCATGATGAGTCATATG | + |
|
Preference number: 4 (lower is better) Translates to: QGPQCLAHSGKA*KYYVCSMMSHM Trigger: CATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACTGTGTGCTAGGCACTGTGGCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR CAA 72 bp | TTGAAATACTATGTCTGTAGCATGATGAGTCATATGTaGAGGATGACGAAAAGGGGCAGTGGCTGCACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LKYYVCSMMSHM*RMTKRGSGCTR Trigger: TCGGGTGCAGCCACTGCCCCTTTTCGTCATCCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAACAGGCTGGTCCACATGTaGAGCAGTGGTTGGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLDQVIACYGQITQRKRNRLVHM*SSGWQG Trigger: ACCTTGCCAACCACTGCTGCACATGTGGACCAGCCT...GTTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGATGTGCAGCAGTGGTTaGCAAGGTTGGCATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGKALKYYVCSMMSHMLRMCSSG*QGWHFS Trigger: AGAGAAATGCCAACCTTGCCAACCACTGCTGCACAT...CCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR TCA 90 bp | TGGCGTTCCAGTATAGAATGGAGCTTTAACCAGGGAGATCTTTTAAGCACAAAAGCTGTTCATCAGTGTTaGTGTCCCAGAATCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: WRSSIEWSFNQGDLLSTKAVHQC*CPRIHQ Trigger: TTGATGGATTCTGGGACATCAACACTGATGAACAGC...TTTTGTGCTTAAAAGATCTCCCTGGTTAAAGCTCCATTCTATACTGGAACGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR GCA 90 bp | CACAGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGTTCTTGTTCTTCCACTaGTCCATGGCACTGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSGKALKYYVCSMMSHMLFLFFH*SMALLL Trigger: TAACAGCAGTGCCATGGAGCAGTGGAAGAACAAGAA...CAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR CAA 72 bp | CCAGGGAGATCTTTTAAGCACAAAAACCATTCTGGGTaGATATACTTCAGTTGCCAGGAAGTTAGTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGRSFKHKNHSG*IYFSCQEVSQK Trigger: CTTCTGACTAACTTCCTGGCAACTGAAGTATATCAACCCAGAATGGTTTTTGTGCTTAAAAGATCTCCCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR TCA 90 bp | CACAGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGGCTCCACATTACTTCTaGAATATCTGTCAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSGKALKYYVCSMMSHMLAPHYF*NICQAL Trigger: CAAAGCCTGACAGATATTTCAGAAGTAATGTGGAGC...CAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGGCTCCACATTACTTCTaGAATATCTGTCAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKALKYYVCSMMSHMLRAPHYF*NICQAL Trigger: CAAAGCCTGACAGATATTTCAGAAGTAATGTGGAGC...CCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CCA 90 bp | GCACACAGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGGTGGCATTTCCCTCATaGTTTTCATCACCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSGKALKYYVCSMMSHMVAFPS*FSSPKS Trigger: TGATTTTGGTGATGAAAACCATGAGGGAAATGCCAC...CATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACTGTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGATATCTGTCAGGCTTTaGTATAAAGCAGGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKALKYYVCSMMSHMLRISVRL*YKAGHS Trigger: GCTGTGTCCTGCTTTATACCAAAGCCTGACAGATAT...CCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGATGACGAAAAGGATGTGCAGCAGTGGTTaGCAAGGTTGGCATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYYVCSMMSHMLRMTKRMCSSG*QGWHFS Trigger: AGAGAAATGCCAACCTTGCCAACCACTGCTGCACAT...CCTTTTCGTCATCCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGCCCAGAATCCATCAATaGATTCTCCTTGATAATACT | + |
|
Preference number: 4 (lower is better) Translates to: SGKALKYYVCSMMSHMLRPRIHQ*ILLDNT Trigger: AGTATTATCAAGGAGAATTCATTGATGGATTCTGGG...CCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAAATATCTGTCAGGCTTTaGTATAAAGCAGGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISRSSNCMLWTNHPEKKEISVRL*YKAGHS Trigger: GCTGTGTCCTGCTTTATACCAAAGCCTGACAGATAT...TTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| 3UTR CAA 72 bp | TATCTATTTTTCATTGATGGTATAGAGAACATTGCCTaGTGCAGGCTTCTCCTAGACAGTCTCAGAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: YLFFIDGIENIA*CRLLLDSLRIT Trigger: TGTAATTCTGAGACTGTCTAGGAGAAGCCTGCACAAGGCAATGTTCTCTATACCATCAATGAAAAATAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR CCA 90 bp | ATCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAAGTGGCATTTCCCTCATaGTTTTCATCACCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRSSNCMLWTNHPEKKEVAFPS*FSSPKS Trigger: TGATTTTGGTGATGAAAACCATGAGGGAAATGCCAC...TTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAACCCAGAATCCATCAATaGATTCTCCTTGATAATACT | + |
|
Preference number: 4 (lower is better) Translates to: ISRSSNCMLWTNHPEKKEPRIHQ*ILLDNT Trigger: AGTATTATCAAGGAGAATTCATTGATGGATTCTGGG...TTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | TGTATGTGCACAAAGAAGATGCTCTCAGCACAGGGGAAAGCAACACTGACCCAGTCAAAGGGGCTGGACTaGCATGCCATGGATCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CMCTKKMLSAQGKATLTQSKGLD*HAMDRG Trigger: GCCTCGATCCATGGCATGCAAGTCCAGCCCCTTTGA...CTGGGTCAGTGTTGCTTTCCCCTGTGCTGAGAGCATCTTCTTTGTGCACATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR CAA 90 bp | TTCCAGATTTCACTGCCAGATTGCCACTGCAGGGGCAACCAGCCTGTCGGACAGTGCTGTTCATCAGTGTaGATGTCCCAGAATCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FQISLPDCHCRGNQPVGQCCSSV*MSQNPS Trigger: TGATGGATTCTGGGACATCAACACTGATGAACAGCA...CTGTCCGACAGGCTGGTTGCCCCTGCAGTGGCAATCTGGCAGTGAAATCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR CAA 90 bp | TGGACAAATCACCCAGAGAAAAAGGAACCTGTGATTAGCAAGGGCCACAGTGCCTGTGGCGACGATTTGTaGAGGCAGCAACTGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: WTNHPEKKEPVISKGHSACGDDL*RQQLKS Trigger: AGATTTCAGTTGCTGCCTCAACAAATCGTCGCCACA...GGCACTGTGGCCCTTGCTAATCACAGGTTCCTTTTTCTCTGGGTGATTTGTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTGTTGCAATTAGAGACATCTCAGAACCATGGACTTTGGTGGATGAGGCATGTGCAGCAGTGGTaGGCAAGGTTGGCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKLLQLETSQNHGLWWMRHVQQW*ARLAFL Trigger: GAGAAATGCCAACCTTGCCAACCACTGCTGCACATG...CCTCATCCACCAAAGTCCATGGTTCTGAGATGTCTCTAATTGCAACAACTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170893.3 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGTCAAAGGGGCTGGACTaGCATGCCATGGATCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGKALKYYVCSMMSHMLRSKGLD*HAMDRG Trigger: GCCTCGATCCATGGCATGCAAGTCCAGCCCCTTTGA...CCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CCA 90 bp | CCTGATTGCAGGCTCCACATTACTTCTGAAATATCTGTCAGGCTTTaGTATAAAGCAGGACACAGCATAGTGGCATTTCCCTCATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PDCRLHITSEISVRL*YKAGHSIVAFPSWF Trigger: AAACCATGAGGGAAATGCCACTATGCTGTGTCCTGCTTTATACCAAAGCCTGACAGATATTTCAGAAGTAATGTGGAGCCTGCAATCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAACATGTGCAGCAGTGGTaGGCAAGGTTGGCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISRSSNCMLWTNHPEKKEHVQQW*ARLAFL Trigger: GAGAAATGCCAACCTTGCCAACCACTGCTGCACATG...TTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGATGACGAAAAGGATAACAAGCAGAGCATaGCCAGCATTGCGAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LKYYVCSMMSHMLRMTKRITSRA*PALRAL Trigger: CAATGCTCGCAATGCTGGCAATGCTCTGCTTGTTAT...CCTTTTCGTCATCCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAAGGCCTTGAAATACTATGTCTGTAGCATGATGAGTCATATGTTGAGGTACTTGACAGTGAGTTaGCAATTTAGGGCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGKALKYYVCSMMSHMLRYLTVS*QFRAYV Trigger: CACATATGCCCTAAATTGCAAACTCACTGTCAAGTA...CCTCAACATATGACTCATCATGCTACAGACATAGTATTTCAAGGCCTTTCCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAATGCTGTTCATCAGTGTaGATGTCCCAGAATCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISRSSNCMLWTNHPEKKECCSSV*MSQNPS Trigger: TGATGGATTCTGGGACATCAACACTGATGAACAGCA...TTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTAGATCAAGTAATTGCATGTTATGGACAAATCACCCAGAGAAAAAGGAATACTTGACAGTGAGTTaGCAATTTAGGGCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISRSSNCMLWTNHPEKKEYLTVS*QFRAYV Trigger: CACATATGCCCTAAATTGCAAACTCACTGTCAAGTA...TTCCTTTTTCTCTGGGTGATTTGTCCATAACATGCAATTACTTGATCTAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | AGCAATATCATTATCAACCCATCAAAGGGGCTGGACTaGCATGCCATGGATCGAGGCTGGTCCACATGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SNIIINPSKGLD*HAMDRGWSTCA Trigger: TGCACATGTGGACCAGCCTCGATCCATGGCATGCAAGTCCAGCCCCTTTGATGGGTTGATAATGATATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | AGGATCAAGAGAAGTAGAGCCATAACAAGCAGAGCATaGCCAGCATTGCGAGCATTGCCTTCGATGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RIKRSRAITSRA*PALRALPSMTG Trigger: TCCAGTCATCGAAGGCAATGCTCGCAATGCTGGCAATGCTCTGCTTGTTATGGCTCTACTTCTCTTGATCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | GGCAAGGTTGGCATTTCTCTAAAGTGTGGCGACGATTaGTTGAGGCAGCAACTGAAATCTACCATGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GKVGISLKCGDD*LRQQLKSTMRT Trigger: TGTCCTCATGGTAGATTTCAGTTGCTGCCTCAACAAATCGTCGCCACACTTTAGAGAAATGCCAACCTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | CACAGTCCTTGTAGAGTACGATACTTGACAGTGAGTTaGCAATTTAGGGCATATGTGCCTGCACTACAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HSPCRVRYLTVS*QFRAYVPALQD Trigger: GTCCTGTAGTGCAGGCACATATGCCCTAAATTGCAAACTCACTGTCAAGTATCGTACTCTACAAGGACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CCA 72 bp | AGGCTCCACATTACTTCTGAAATATCTGTCAGGCTTTaGTATAAAGCAGGACACAGCATAGTGGCATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLHITSEISVRL*YKAGHSIVAFP Trigger: GGGAAATGCCACTATGCTGTGTCCTGCTTTATACCAAAGCCTGACAGATATTTCAGAAGTAATGTGGAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | AAGGTTGGCATTTCTCTAAAGTGTGGCGACGATTTGTaGAGGCAGCAACTGAAATCTACCATGAGGACATTC | + |
|
Preference number: 6 (lower is better) Translates to: KVGISLKCGDDL*RQQLKSTMRTF Trigger: GAATGTCCTCATGGTAGATTTCAGTTGCTGCCTCAACAAATCGTCGCCACACTTTAGAGAAATGCCAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS GCA 72 bp | TTTCTAGGTTCTTGTTCTTCCACTGCTCCATGGCACTaGTGTTATCAGAATGACTTTCTCTCCAGGTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FLGSCSSTAPWH*CYQNDFLSRSY Trigger: ATAAGACCTGGAGAGAAAGTCATTCTGATAACAGCAGTGCCATGGAGCAGTGGAAGAACAAGAACCTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CCA 72 bp | TATCTTTTTCTAGGTTCTTGTTCTTCCACTGCTCCATaGCACTGCTGTTATCAGAATGACTTTCTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YLFLGSCSSTAP*HCCYQNDFLSR Trigger: CCTGGAGAGAAAGTCATTCTGATAACAGCAGTGCCATGGAGCAGTGGAAGAACAAGAACCTAGAAAAAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | ACCATGAGGACATTCCTGATATCTTTTTCTAGGTTCTaGTTCTTCCACTGCTCCATGGCACTGCTGTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: TMRTFLISFSRF*FFHCSMALLLS Trigger: TGATAACAGCAGTGCCATGGAGCAGTGGAAGAACAAGAACCTAGAAAAAGATATCAGGAATGTCCTCATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS GCA 72 bp | GATCTTGTTGTGACATTCAAGGCATCATTACCTGATTaGAGGCTCCACATTACTTCTGAAATATCTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DLVVTFKASLPD*RLHITSEISVR Trigger: CCTGACAGATATTTCAGAAGTAATGTGGAGCCTGCAATCAGGTAATGATGCCTTGAATGTCACAACAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 90 bp | CTGTTCATCAGTGTTGATGTCCCAGAATCCATCAATGAATTCTCCTaGATAATACTGAGATCTTGTTGTGACATTCAAGGCATCATTACC | + |
|
Preference number: 6 (lower is better) Translates to: LFISVDVPESINEFS*IILRSCCDIQGIIT Trigger: GGTAATGATGCCTTGAATGTCACAACAAGATCTCAGTATTATCAAGGAGAATTCATTGATGGATTCTGGGACATCAACACTGATGAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CAA 72 bp | AGTGTTGATGTCCCAGAATCCATCAATGAATTCTCCTaGATAATACTGAGATCTTGTTGTGACATTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVDVPESINEFS*IILRSCCDIQG Trigger: GCCTTGAATGTCACAACAAGATCTCAGTATTATCAAGGAGAATTCATTGATGGATTCTGGGACATCAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||
| CDS CCA 72 bp | GTTATCAGAATGACTTTCTCTCCAGGTCTTATTAAGTaGATAAACGTAGATGCTATGCTGTTCATCAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VIRMTFSPGLIK*INVDAMLFISV Trigger: AACACTGATGAACAGCATAGCATCTACGTTTATCCACTTAATAAGACCTGGAGAGAAAGTCATTCTGATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170893.3 ENSMUST00000216211.2 |
||