Pregenerated sensors for H4F16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096010Ensembl transcript IDs: ENSMUST00000179285.3
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCGGTAGGCGGGGCCACCAGCCCAAGTCCTCCAATGAAAAAGTaGACCCAGGCAGCTCAATTTGCATACAAGACAAAGCATACCAAA | + |
|
Preference number: 1 (lower is better) Translates to: QAVGGATSPSPPMKK*TQAAQFAYKTKHTK Trigger: TTTGGTATGCTTTGTCTTGTATGCAAATTGAGCTGCCTGGGTGCACTTTTTCATTGGAGGACTTGGGCTGGTGGCCCCGCCTACCGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 90 bp | ACTAGTGAGAACTACAAATGTCCACAGCTCCTTTCTGATGCTTTGTaGGCCCTGAAAAGGGCCTTTGTGGATGGGGGAAGCCGGCCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: TSENYKCPQLLSDAL*ALKRAFVDGGSRPR Trigger: CCTTGGCCGGCTTCCCCCATCCACAAAGGCCCTTTTCAGGGCCCACAAAGCATCAGAAAGGAGCTGTGGACATTTGTAGTTCTCACTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 90 bp | CTACAGCTGAGAAAGCCAAGTTTAAGCTACAGGGTGACTTTATTGTaGGGTTCCAAGCCTCCACACCTGCCCTCATTCAGGTCCACTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LQLRKPSLSYRVTLL*GSKPPHLPSFRSTV Trigger: GACAGTGGACCTGAATGAGGGCAGGTGTGGAGGCTTGGAACCCCACAATAAAGTCACCCTGTAGCTTAAACTTGGCTTTCTCAGCTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 90 bp | AGGGGCCTAAGGAAGCGACTTCCTGGATCCAGAGTTAAACCCATCTaGGTATGGAGCATCGAATACAAGTACTTTGAAGGAGCAGCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: RGLRKRLPGSRVKPI*VWSIEYKYFEGAAR Trigger: CCTTGCTGCTCCTTCAAAGTACTTGTATTCGATGCTCCATACCCAGATGGGTTTAACTCTGGATCCAGGAAGTCGCTTCCTTAGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 90 bp | CTAAGGAAGCGACTTCCTGGATCCAGAGTTAAACCCATCTGGGTATaGAGCATCGAATACAAGTACTTTGAAGGAGCAGCAAGGGCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: LRKRLPGSRVKPIWV*SIEYKYFEGAARAV Trigger: CACAGCCCTTGCTGCTCCTTCAAAGTACTTGTATTCGATGCTCCATACCCAGATGGGTTTAACTCTGGATCCAGGAAGTCGCTTCCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR GCA 90 bp | CAGGAAAGACGCAACAAACCGGAATCTTCTGCGGCAAAACTTTATTaGTTACATCTTCAGGAGCCAGAGTGCAAGAGAGCAAGAGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: QERRNKPESSAAKLY*LHLQEPECKRARER Trigger: TCTCTCTCTTGCTCTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTCTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR TCA 90 bp | AATCTGCTGAAAGACCGCACCAAGTTTCTGCCACACAGAAAGCATTaGACACGAGATAACCATATCTTAATGAAATGCCAGGTTCCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: NLLKDRTKFLPHRKH*TRDNHILMKCQVPA Trigger: AGCAGGAACCTGGCATTTCATTAAGATATGGTTATCTCGTGTTCAATGCTTTCTGTGTGGCAGAAACTTGGTGCGGTCTTTCAGCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR GCA 90 bp | CAGCCCAAGTCCTCCAATGAAAAAGTGCACCCAGGCAGCTCAATTTaGATACAAGACAAAGCATACCAAATACAAAAAGTAATGAGACGC | + |
|
Preference number: 1 (lower is better) Translates to: QPKSSNEKVHPGSSI*IQDKAYQIQKVMRR Trigger: GCGTCTCATTACTTTTTGTATTTGGTATGCTTTGTCTTGTATGCAAATTGAGCTGCCTGGGTGCACTTTTTCATTGGAGGACTTGGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCTGAACTAAATGGTAGACATCCGAGTGCTCCTCTTCCCCCAAACCCACGTAGCGTCCGCAGAGGCTaGACCCTAGCACTCTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QPELNGRHPSAPLPPNPRSVRRG*TLALWG Trigger: GCCCCAGAGTGCTAGGGTGCAGCCTCTGCGGACGCT...ACGTGGGTTTGGGGGAAGAGGAGCACTCGGATGTCTACCATTTAGTTCAGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 90 bp | CAGCTACAGCTGAGAAAGCCAAGTTTAAGCTACAGGGTGACTTTATaGTGGGGTTCCAAGCCTCCACACCTGCCCTCATTCAGGTCCACT | + |
|
Preference number: 2 (lower is better) Translates to: QLQLRKPSLSYRVTL*WGSKPPHLPSFRST Trigger: AGTGGACCTGAATGAGGGCAGGTGTGGAGGCTTGGAACCCCACAATAAAGTCACCCTGTAGCTTAAACTTGGCTTTCTCAGCTGTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR TCA 90 bp | CACATGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAATGCTTTGTGGGCCCTaGAAAGGGCCTTTGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: HMAGKLPLHVCRLCLPLRMLCGP*KGPLWM Trigger: CATCCACAAAGGCCCTTTTCAGGGCCCACAAAGCAT...TCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTACAGGGTGACTTTATTGTGGGGTTCCAAGCCTCCACACCTGCCCTCATTCCTCCAATGAAAAAGTaGACCCAGGCAGCTCAATTT | + |
|
Preference number: 2 (lower is better) Translates to: KLQGDFIVGFQASTPALIPPMKK*TQAAQF Trigger: AAATTGAGCTGCCTGGGTGCACTTTTTCATTGGAGG...AATGAGGGCAGGTGTGGAGGCTTGGAACCCCACAATAAAGTCACCCTGTAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAGAGCTTTCTGATGCTTTGTaGGCCCTGAAAAGGGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLRQNFIAYIFRSQSARELSDAL*ALKRAF Trigger: AAAGGCCCTTTTCAGGGCCCACAAAGCATCAGAAAG...CTCTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGTTTTGCCGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACGCAACAAACCGGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCTCCACAGCTCCTTTCTaGTGCTTTGTGGGCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KDATNRNLLRQNFIAYIFSTAPF*CFVGPE Trigger: TTCAGGGCCCACAAAGCATCAGAAAGGAGCTGTGGA...GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 90 bp | CGCCATCTTATAATGGCAAATGTGAGGGCGGCTTCCCACACAATTTaGCTTAATATAGTGATTTCTGTCCCGTCCATCATCTTGTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RHLIMANVRAASHTI*LNIVISVPSIILSV Trigger: CACTGACAAGATGATGGACGGGACAGAAATCACTATATTAAGCAAAATTGTGTGGGAAGCCGCCCTCACATTTGCCATTATAAGATGGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAAATCTAGGCTCCAAAATTTTAGCCTTCGTTGTCTCATCCACAGCTGTACTCAGAGTTAAACCCATCTaGGTATGGAGCATCGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: SNLGSKILAFVVSSTAVLRVKPI*VWSIEY Trigger: GTATTCGATGCTCCATACCCAGATGGGTTTAACTCT...GAGTACAGCTGTGGATGAGACAACGAAGGCTAAAATTTTGGAGCCTAGATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 90 bp | CTTTCCATCCGGGCAGGTGACATGGCAGTTTCTAATTTAAGCCTTTaGAGAGAAATGATTTCCACAGTGAATGCACAAATACTTTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSIRAGDMAVSNLSL*REMISTVNAQILLL Trigger: CAACAAAAGTATTTGTGCATTCACTGTGGAAATCATTTCTCTCAAAAGGCTTAAATTAGAAACTGCCATGTCACCTGCCCGGATGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACGCAACAAACCGGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCTATCAGTGTTATGTATaGTCAGACTCTAGAAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KDATNRNLLRQNFIAYIFYQCYV*SDSRSE Trigger: TTCACTTCTAGAGTCTGAGCATACATAACACTGATA...GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR TCA 72 bp | AATGTCCACAGCTCCTTTCTGATGCTTTGTGGGCCCTaGAAAGGGCCTTTGTGGATGGGGGAAGCCGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: NVHSSFLMLCGP*KGPLWMGEAGQ Trigger: TTGGCCGGCTTCCCCCATCCACAAAGGCCCTTTTCAGGGCCCACAAAGCATCAGAAAGGAGCTGTGGACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR GCA 72 bp | GGCGGGGCCACCAGCCCAAGTCCTCCAATGAAAAAGTaGACCCAGGCAGCTCAATTTGCATACAAGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GGATSPSPPMKK*TQAAQFAYKTK Trigger: CTTTGTCTTGTATGCAAATTGAGCTGCCTGGGTGCACTTTTTCATTGGAGGACTTGGGCTGGTGGCCCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 72 bp | TCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATaGCGGGAAAACTGCCCCTGCACGTGTGCAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SAQLSSRERQNT*RENCPCTCADY Trigger: ATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGATGACAACTGGGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 72 bp | AACTACAAATGTCCACAGCTCCTTTCTGATGCTTTGTaGGCCCTGAAAAGGGCCTTTGTGGATGGGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: NYKCPQLLSDAL*ALKRAFVDGGS Trigger: GCTTCCCCCATCCACAAAGGCCCTTTTCAGGGCCCACAAAGCATCAGAAAGGAGCTGTGGACATTTGTAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR GCA 72 bp | GCAGAACACATGGCGGGAAAACTGCCCCTGCACGTGTaGAGATTATGTTTACCACTTAGAACACAGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AEHMAGKLPLHV*RLCLPLRTQLS Trigger: TGACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 72 bp | AGAAAGCCAAGTTTAAGCTACAGGGTGACTTTATTGTaGGGTTCCAAGCCTCCACACCTGCCCTCATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RKPSLSYRVTLL*GSKPPHLPSFR Trigger: CCTGAATGAGGGCAGGTGTGGAGGCTTGGAACCCCACAATAAAGTCACCCTGTAGCTTAAACTTGGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR GCA 72 bp | CGCAACAAACCGGAATCTTCTGCGGCAAAACTTTATTaGTTACATCTTCAGGAGCCAGAGTGCAAGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RNKPESSAAKLY*LHLQEPECKRA Trigger: TGCTCTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 72 bp | CGACTTCCTGGATCCAGAGTTAAACCCATCTGGGTATaGAGCATCGAATACAAGTACTTTGAAGGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLPGSRVKPIWV*SIEYKYFEGAA Trigger: TGCTGCTCCTTCAAAGTACTTGTATTCGATGCTCCATACCCAGATGGGTTTAACTCTGGATCCAGGAAGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CCA 72 bp | AGGAAGCGACTTCCTGGATCCAGAGTTAAACCCATCTaGGTATGGAGCATCGAATACAAGTACTTTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RKRLPGSRVKPI*VWSIEYKYFEG Trigger: TCCTTCAAAGTACTTGTATTCGATGCTCCATACCCAGATGGGTTTAACTCTGGATCCAGGAAGTCGCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR TCA 72 bp | GAAGACTTAAATGAGACACATATGGTCTGTGGAAGCTaGAACAGAAGGACCACCGAAAGACTTATACCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EDLNETHMVCGS*NRRTTERLIPA Trigger: GGCTGGTATAAGTCTTTCGGTGGTCCTTCTGTTTCAGCTTCCACAGACCATATGTGTCTCATTTAAGTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTCCTATTTCTTCAGCCAGTGAGAAGACCCGTAAACATCAGATGTAAAAACCCCAGGCAGCTCAATTaGCATACAAGACAAAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SLLFLQPVRRPVNIRCKNPRQLN*HTRQSI Trigger: TATGCTTTGTCTTGTATGCAAATTGAGCTGCCTGGG...GTTTTTACATCTGATGTTTACGGGTCTTCTCACTGGCTGAAGAAATAGGAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR TCA 72 bp | AAAGACCGCACCAAGTTTCTGCCACACAGAAAGCATTaGACACGAGATAACCATATCTTAATGAAATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KDRTKFLPHRKH*TRDNHILMKCQ Trigger: CTGGCATTTCATTAAGATATGGTTATCTCGTGTTCAATGCTTTCTGTGTGGCAGAAACTTGGTGCGGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR GCA 72 bp | TCCTCCAATGAAAAAGTGCACCCAGGCAGCTCAATTTaGATACAAGACAAAGCATACCAAATACAAAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSNEKVHPGSSI*IQDKAYQIQKV Trigger: TACTTTTTGTATTTGGTATGCTTTGTCTTGTATGCAAATTGAGCTGCCTGGGTGCACTTTTTCATTGGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 72 bp | CTGAGAAAGCCAAGTTTAAGCTACAGGGTGACTTTATaGTGGGGTTCCAAGCCTCCACACCTGCCCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LRKPSLSYRVTL*WGSKPPHLPSF Trigger: GAATGAGGGCAGGTGTGGAGGCTTGGAACCCCACAATAAAGTCACCCTGTAGCTTAAACTTGGCTTTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 72 bp | ACGCAACAAACCGGAATCTTCTGCGGCAAAACTTTATaGCTTACATCTTCAGGAGCCAGAGTGCAAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQQTGIFCGKTL*LTSSGARVQES Trigger: GCTCTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 72 bp | ATAATGGCAAATGTGAGGGCGGCTTCCCACACAATTTaGCTTAATATAGTGATTTCTGTCCCGTCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: IMANVRAASHTI*LNIVISVPSII Trigger: GATGATGGACGGGACAGAAATCACTATATTAAGCAAAATTGTGTGGGAAGCCGCCCTCACATTTGCCATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| 3UTR CAA 72 bp | CGGGCAGGTGACATGGCAGTTTCTAATTTAAGCCTTTaGAGAGAAATGATTTCCACAGTGAATGCACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RAGDMAVSNLSL*REMISTVNAQI Trigger: TATTTGTGCATTCACTGTGGAAATCATTTCTCTCAAAAGGCTTAAATTAGAAACTGCCATGTCACCTGCCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGAACTAAATGGTAGACATCCGAGTGCTCCTCTTCCCCCAAACCCACGTCCTTTCCCCAGACCCTaGCCGCCTTTTCCTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPELNGRHPSAPLPPNPRPFPRP*PPFPRP Trigger: AGGACGAGGAAAAGGCGGCAAGGGTCTGGGGAAAGG...ACGTGGGTTTGGGGGAAGAGGAGCACTCGGATGTCTACCATTTAGTTCAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||
| CDS-3UTR CAA 90 bp | AAAGACGCAACAAACCGGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCTTGTCGCGGAGAACCTaGCGGTGTCGCTTGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KDATNRNLLRQNFIAYIFLSRRT*RCRLAP Trigger: TGGCGCCAAGCGACACCGCAAGGTTCTCCGCGACAA...GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179285.3 |
||