Pregenerated sensors for H2AZ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041126Ensembl transcript IDs: ENSMUST00000093346.6, ENSMUST00000109737.9
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTCCTTGATAAGGGCTGGAGAGGTTAAGATCACTGGCAGCTCTTaGAGAGGTCCTGAGTTCAGTTCCCAGCACCCACATGGTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: HSLIRAGEVKITGSS*RGPEFSSQHPHGGS Trigger: GGAGCCACCATGTGGGTGCTGGGAACTGAACTCAGGACCTCTGCAAGAGCTGCCAGTGATCTTAACCTCTCCAGCCCTTATCAAGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR GCA 90 bp | CCAGCACCCACATGGTGGCTCCCAATGGTCTGTAATGGGATCTGGTaGTTTCTTATGGCTTGCAGGCATATAGGCAGGCAGAACACTGTA | + |
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Preference number: 1 (lower is better) Translates to: PAPTWWLPMVCNGIW*FLMACRHIGRQNTV Trigger: TACAGTGTTCTGCCTGCCTATATGCCTGCAAGCCATAAGAAAGCACCAGATCCCATTACAGACCATTGGGAGCCACCATGTGGGTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR GCA 90 bp | CCTGTGTGCACTCTGAAGCCAGACAGACCTAGGCTTGTGTCCAACTaGACTGACCCATCTACCAGCTCAACTGTCTTCTCAGCAGATCAT | + |
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Preference number: 1 (lower is better) Translates to: PVCTLKPDRPRLVSN*TDPSTSSTVFSADH Trigger: ATGATCTGCTGAGAAGACAGTTGAGCTGGTAGATGGGTCAGTGCAGTTGGACACAAGCCTAGGTCTGTCTGGCTTCAGAGTGCACACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR CCA 90 bp | TTCCCAGCACCCACATGGTGGCTCCCAATGGTCTGTAATGGGATCTaGTGCTTTCTTATGGCTTGCAGGCATATAGGCAGGCAGAACACT | + |
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Preference number: 1 (lower is better) Translates to: FPAPTWWLPMVCNGI*CFLMACRHIGRQNT Trigger: AGTGTTCTGCCTGCCTATATGCCTGCAAGCCATAAGAAAGCACCAGATCCCATTACAGACCATTGGGAGCCACCATGTGGGTGCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR CCA 90 bp | AGAGGTCCTGAGTTCAGTTCCCAGCACCCACATGGTGGCTCCCAATaGTCTGTAATGGGATCTGGTGCTTTCTTATGGCTTGCAGGCATA | + |
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Preference number: 1 (lower is better) Translates to: RGPEFSSQHPHGGSQ*SVMGSGAFLWLAGI Trigger: TATGCCTGCAAGCCATAAGAAAGCACCAGATCCCATTACAGACCATTGGGAGCCACCATGTGGGTGCTGGGAACTGAACTCAGGACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR TCA 90 bp | CAATCAGAAAAGTCTAACTTAGTAGCATCACTCCTGTGTGCACTCTaGAGCCAGACAGACCTAGGCTTGTGTCCAACTGCACTGACCCAT | + |
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Preference number: 1 (lower is better) Translates to: QSEKSNLVASLLCAL*SQTDLGLCPTALTH Trigger: ATGGGTCAGTGCAGTTGGACACAAGCCTAGGTCTGTCTGGCTTCAGAGTGCACACAGGAGTGATGCTACTAAGTTAGACTTTTCTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTGAGTTCAGTTCCCAGCACCCACATGGTGGCTCCCAATGGTCTGTAATGACACCTCCCAAACGCTaGGGATGCAGGCAACATGGC | + |
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Preference number: 2 (lower is better) Translates to: GPEFSSQHPHGGSQWSVMTPPKR*GCRQHG Trigger: GCCATGTTGCCTGCATCCCCAGCGTTTGGGAGGTGT...CATTACAGACCATTGGGAGCCACCATGTGGGTGCTGGGAACTGAACTCAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR CCA 72 bp | CCCACATGGTGGCTCCCAATGGTCTGTAATGGGATCTaGTGCTTTCTTATGGCTTGCAGGCATATAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PTWWLPMVCNGI*CFLMACRHIGR Trigger: CCTGCCTATATGCCTGCAAGCCATAAGAAAGCACCAGATCCCATTACAGACCATTGGGAGCCACCATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR GCA 72 bp | ACATGGTGGCTCCCAATGGTCTGTAATGGGATCTGGTaGTTTCTTATGGCTTGCAGGCATATAGGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TWWLPMVCNGIW*FLMACRHIGRQ Trigger: CTGCCTGCCTATATGCCTGCAAGCCATAAGAAAGCACCAGATCCCATTACAGACCATTGGGAGCCACCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR GCA 72 bp | ACTCTGAAGCCAGACAGACCTAGGCTTGTGTCCAACTaGACTGACCCATCTACCAGCTCAACTGTCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TLKPDRPRLVSN*TDPSTSSTVFS Trigger: TGAGAAGACAGTTGAGCTGGTAGATGGGTCAGTGCAGTTGGACACAAGCCTAGGTCTGTCTGGCTTCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR CCA 72 bp | GGCTGTAAGTCACTGCAGGTTAGTGGGATCGATGAATaGCCACACAAAGTTAGAATTCCAGGACCCAATCAG | + |
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Preference number: 3 (lower is better) Translates to: GCKSLQVSGIDE*PHKVRIPGPNQ Trigger: CTGATTGGGTCCTGGAATTCTAACTTTGTGTGGCCATTCATCGATCCCACTAACCTGCAGTGACTTACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| CDS-3UTR TCA 90 bp | TATGCTCTTCCGCACACCGCACTAGTCCCCTCTGCCCTGTTACAGACCGAGGAGATTGCAAGCTGTAAGTaGCGTGGGGTGATGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YALPHTALVPSALLQTEEIASCK*RGVMRF Trigger: GAAGCGCATCACCCCACGTCACTTACAGCTTGCAAT...CTCCTCGGTCTGTAACAGGGCAGAGGGGACTAGTGCGGTGTGCGGAAGAGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093346.6 ENSMUST00000109737.9 |
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| CDS-3UTR TCA 90 bp | TATTCTGAAGGTCCTGCCCACACCTCCCAAACGCTGGGGATGCAGGCAACATGGATTGCAAGCTGTAAGTaGCGTGGGGTGATGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YSEGPAHTSQTLGMQATWIASCK*RGVMRF Trigger: GAAGCGCATCACCCCACGTCACTTACAGCTTGCAAT...CCATGTTGCCTGCATCCCCAGCGTTTGGGAGGTGTGGGCAGGACCTTCAGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| CDS-3UTR GCA 90 bp | CATGGTGGCTCCCAATGGTCTGTAATGGGATCTGGTGCTTTCTTATGGCTTGCAAGAGACTTGTGGATGTaGGGGATCACGCCGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: HGGSQWSVMGSGAFLWLARDLWM*GITPPP Trigger: CGGGGGCGGCGTGATCCCGCACATCCACAAGTCTCT...TGCAAGCCATAAGAAAGCACCAGATCCCATTACAGACCATTGGGAGCCACCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| CDS-3UTR GCA 90 bp | TCAAACTCCGAGTCTAAAAACATACAGATGTGGCCTTTGTCTCGTCTACAGCAAAGAGACTTGTGGATGTaGGGGATCACGCCGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SNSESKNIQMWPLSRLQQRDLWM*GITPPP Trigger: CGGGGGCGGCGTGATCCCGCACATCCACAAGTCTCT...TTGCTGTAGACGAGACAAAGGCCACATCTGTATGTTTTTAGACTCGGAGTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093346.6 ENSMUST00000109737.9 |
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| CDS-3UTR CCA 90 bp | TCAAACTCCGAGTCTAAAAACATACAGATGTGGCCTTTGTCTCGTCTACAGCAACGGCCCACAGGAAACTaGAGCCCAGCTCGCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SNSESKNIQMWPLSRLQQRPTGN*SPARWE Trigger: TTCCCAGCGAGCTGGGCTCCAGTTTCCTGTGGGCCG...TTGCTGTAGACGAGACAAAGGCCACATCTGTATGTTTTTAGACTCGGAGTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| CDS-3UTR GCA 90 bp | TCCGAGTCTAAAAACATACAGATGTGGCCTTTGTCTCGTCTACAGCAACCGTCTGAGGTACTCCAGAATTaGGGCACTGTACACAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SESKNIQMWPLSRLQQPSEVLQN*GTVHSS Trigger: GCTGCTGTGTACAGTGCCGCAATTCTGGAGTACCTC...AGACGGTTGCTGTAGACGAGACAAAGGCCACATCTGTATGTTTTTAGACTCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| 3UTR CAA 72 bp | TCAAACTCCGAGTCTAAAAACATACAGATGTGGCCTTaGTCTCGTCTACAGCAACCGTCTATGCTCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SNSESKNIQMWP*SRLQQPSMLFR Trigger: GCGGAAGAGCATAGACGGTTGCTGTAGACGAGACAAAGGCCACATCTGTATGTTTTTAGACTCGGAGTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093346.6 ENSMUST00000109737.9 |
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| CDS-3UTR CAA 90 bp | TACAGCAACCGTCTATGCTCTTCCGCACACCGCACTAGTCCCCTCTGCCCTGTTCTTCATCACCGCGGATaGCAAGCTGTAAGTGACGTG | + |
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Preference number: 5 (lower is better) Translates to: YSNRLCSSAHRTSPLCPVLHHRG*QAVSDV Trigger: CACGTCACTTACAGCTTGCAATCCGCGGTGATGAAG...AACAGGGCAGAGGGGACTAGTGCGGTGTGCGGAAGAGCATAGACGGTTGCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093346.6 ENSMUST00000109737.9 |
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| CDS-3UTR CAA 90 bp | TATGCTCTTCCGCACACCGCACTAGTCCCCTCTGCCCTGTTACAGACCGAGGAGTTCACTTTGAGATCTTaGGAAGCATTACCTGCTAAC | + |
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Preference number: 5 (lower is better) Translates to: YALPHTALVPSALLQTEEFTLRS*EALPAN Trigger: GTTAGCAGGTAATGCTTCCAAAGATCTCAAAGTGAA...CTCCTCGGTCTGTAACAGGGCAGAGGGGACTAGTGCGGTGTGCGGAAGAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093346.6 ENSMUST00000109737.9 |
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| CDS-3UTR CAA 90 bp | CTTGTGTCCAACTGCACTGACCCATCTACCAGCTCAACTGTCTTCTCAGCAGATCTTCATCACCGCGGATaGCAAGCTGTAAGTGACGTG | + |
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Preference number: 5 (lower is better) Translates to: LVSNCTDPSTSSTVFSADLHHRG*QAVSDV Trigger: CACGTCACTTACAGCTTGCAATCCGCGGTGATGAAG...ATCTGCTGAGAAGACAGTTGAGCTGGTAGATGGGTCAGTGCAGTTGGACACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109737.9 |
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| CDS-3UTR CAA 90 bp | CTTTTGTATAAAACACAAGGGAGAAACCTGGCCAATCAACACATGACTGTGACCTTCACTTTGAGATCTTaGGAAGCATTACCTGCTAAC | + |
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Preference number: 5 (lower is better) Translates to: LLYKTQGRNLANQHMTVTFTLRS*EALPAN Trigger: GTTAGCAGGTAATGCTTCCAAAGATCTCAAAGTGAA...GGTCACAGTCATGTGTTGATTGGCCAGGTTTCTCCCTTGTGTTTTATACAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093346.6 ENSMUST00000109737.9 |
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