Pregenerated sensors for H2AL1H (Mus musculus)

Ensembl gene IDs: ENSMUSG00000099443

Ensembl transcript IDs: ENSMUST00000177926.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTGGCGGAGCTGTTCGTTGTTCTGTACCACCAGACGTACATCCTCTaGAGCTATGCGCTTCCTGCCAGTGGTCTGGGCCACCTCACCAGC	+
Preference number: 5 (lower is better) Translates to: LAELFVVLYHQTYIL*SYALPASGLGHLTS Trigger: GCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACGTCTGGTGGTACAGAACAACGAACAGCTCCGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177926.3
CDS GCA 90 bp	GCTGTTCGTTGTTCTGTACCACCAGACGTACATCCTCTGGAGCTATaGGCTTCCTGCCAGTGGTCTGGGCCACCTCACCAGCCAGTTCGA	+
Preference number: 5 (lower is better) Translates to: AVRCSVPPDVHPLEL*ASCQWSGPPHQPVR Trigger: TCGAACTGGCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACGTCTGGTGGTACAGAACAACGAACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177926.3
CDS CCA 90 bp	GTACCACCAGACGTACATCCTCTGGAGCTATGCGCTTCCTGCCAGTaGTCTGGGCCACCTCACCAGCCAGTTCGAGGATGTTCGATGTTA	+
Preference number: 5 (lower is better) Translates to: VPPDVHPLELCASCQ*SGPPHQPVRGCSML Trigger: TAACATCGAACATCCTCGAACTGGCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACGTCTGGTGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177926.3

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