Pregenerated sensors for H2AL1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000101819

Ensembl transcript IDs: ENSMUST00000189531.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTGGCGGAGCTGTTCGTTGTTCTGTACCACCAGATGTACATCCTCTaGAGCTATGCGCTTCCTGCCAGTGGTCTGGGCCACCTCACCAGC	+
Preference number: 5 (lower is better) Translates to: LAELFVVLYHQMYIL*SYALPASGLGHLTS Trigger: GCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACATCTGGTGGTACAGAACAACGAACAGCTCCGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189531.2
CDS GCA 90 bp	GCTGTTCGTTGTTCTGTACCACCAGATGTACATCCTCTGGAGCTATaGGCTTCCTGCCAGTGGTCTGGGCCACCTCACCAGCCAGTTCGA	+
Preference number: 5 (lower is better) Translates to: AVRCSVPPDVHPLEL*ASCQWSGPPHQPVR Trigger: TCGAACTGGCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACATCTGGTGGTACAGAACAACGAACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189531.2
CDS CCA 90 bp	GTACCACCAGATGTACATCCTCTGGAGCTATGCGCTTCCTGCCAGTaGTCTGGGCCACCTCACCAGCCAGTTCGAGGATGTTCGATGTTA	+
Preference number: 5 (lower is better) Translates to: VPPDVHPLELCASCQ*SGPPHQPVRGCSML Trigger: TAACATCGAACATCCTCGAACTGGCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACATCTGGTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189531.2
CDS CCA 72 bp	GATGTACATCCTCTGGAGCTATGCGCTTCCTGCCAGTaGTCTGGGCCACCTCACCAGCCAGTTCGAGGATGT	+
Preference number: 6 (lower is better) Translates to: DVHPLELCASCQ*SGPPHQPVRGC Trigger: ACATCCTCGAACTGGCTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189531.2
CDS GCA 72 bp	TGTTCTGTACCACCAGATGTACATCCTCTGGAGCTATaGGCTTCCTGCCAGTGGTCTGGGCCACCTCACCAG	+
Preference number: 6 (lower is better) Translates to: CSVPPDVHPLEL*ASCQWSGPPHQ Trigger: CTGGTGAGGTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACATCTGGTGGTACAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189531.2
CDS CCA 72 bp	CTGTTCGTTGTTCTGTACCACCAGATGTACATCCTCTaGAGCTATGCGCTTCCTGCCAGTGGTCTGGGCCAC	+
Preference number: 6 (lower is better) Translates to: LFVVLYHQMYIL*SYALPASGLGH Trigger: GTGGCCCAGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACATCTGGTGGTACAGAACAACGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189531.2

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