Pregenerated sensors for H2AB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067441

Ensembl transcript IDs: ENSMUST00000122446.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCTGTTCCACCAGGCTCACTGCAAAGATCAGCTCAGCTCTGGAGGTaGGGGAGCGACGGTGGCGGCGACCTGAAGACTCTCGAAGACAGT	+
Preference number: 5 (lower is better) Translates to: AVPPGSLQRSAQLWR*GSDGGGDLKTLEDS Trigger: ACTGTCTTCGAGAGTCTTCAGGTCGCCGCCACCGTCGCTCCCGCACCTCCAGAGCTGAGCTGATCTTTGCAGTGAGCCTGGTGGAACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS CCA 90 bp	TCAGATGCTGTTCCACCAGGCTCACTGCAAAGATCAGCTCAGCTCTaGAGGTGCGGGAGCGACGGTGGCGGCGACCTGAAGACTCTCGAA	+
Preference number: 5 (lower is better) Translates to: SDAVPPGSLQRSAQL*RCGSDGGGDLKTLE Trigger: TTCGAGAGTCTTCAGGTCGCCGCCACCGTCGCTCCCGCACCTCCAGAGCTGAGCTGATCTTTGCAGTGAGCCTGGTGGAACAGCATCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS CCA 90 bp	CTCACTGCAAAGATCAGCTCAGCTCTGGAGGTGCGGGAGCGACGGTaGCGGCGACCTGAAGACTCTCGAAGACAGTTTTCCCTGTTCCTT	+
Preference number: 5 (lower is better) Translates to: LTAKISSALEVRERR*RRPEDSRRQFSLFL Trigger: AAGGAACAGGGAAAACTGTCTTCGAGAGTCTTCAGGTCGCCGCCACCGTCGCTCCCGCACCTCCAGAGCTGAGCTGATCTTTGCAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS TCA 72 bp	GGGCCTCATTGCCCGCAAGCTCCAGCAACCTGCGGGTaGGGGACTCCAGGATGGCTGCCAGGAAGATGGGCA	+
Preference number: 6 (lower is better) Translates to: GPHCPQAPATCG*GTPGWLPGRWA Trigger: TGCCCATCTTCCTGGCAGCCATCCTGGAGTCCCTCACCCGCAGGTTGCTGGAGCTTGCGGGCAATGAGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS CAA 72 bp	GTGATGCGCCTCTCGGTACCTCTGCGTTGGGCCTCATaGCCCGCAAGCTCCAGCAACCTGCGGGTGAGGGAC	+
Preference number: 6 (lower is better) Translates to: VMRLSVPLRWAS*PASSSNLRVRD Trigger: GTCCCTCACCCGCAGGTTGCTGGAGCTTGCGGGCAATGAGGCCCAACGCAGAGGTACCGAGAGGCGCATCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS GCA 72 bp	CCAGGCTCACTGCAAAGATCAGCTCAGCTCTGGAGGTaGGGGAGCGACGGTGGCGGCGACCTGAAGACTCTC	+
Preference number: 6 (lower is better) Translates to: PGSLQRSAQLWR*GSDGGGDLKTL Trigger: GAGAGTCTTCAGGTCGCCGCCACCGTCGCTCCCGCACCTCCAGAGCTGAGCTGATCTTTGCAGTGAGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS CCA 72 bp	GTTCCACCAGGCTCACTGCAAAGATCAGCTCAGCTCTaGAGGTGCGGGAGCGACGGTGGCGGCGACCTGAAG	+
Preference number: 6 (lower is better) Translates to: VPPGSLQRSAQL*RCGSDGGGDLK Trigger: CTTCAGGTCGCCGCCACCGTCGCTCCCGCACCTCCAGAGCTGAGCTGATCTTTGCAGTGAGCCTGGTGGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS CAA 90 bp	AGTTCAGGAGTGATGCGCCTCTCGGTACCTCTGCGTTGGGCCTCATaGCCCGCAAGCTCCAGCAACCTGCGGGTGAGGGACTCCAGGATG	+
Preference number: 6 (lower is better) Translates to: SSGVMRLSVPLRWAS*PASSSNLRVRDSRM Trigger: CATCCTGGAGTCCCTCACCCGCAGGTTGCTGGAGCTTGCGGGCAATGAGGCCCAACGCAGAGGTACCGAGAGGCGCATCACTCCTGAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122446.2
CDS CCA 72 bp	AAGATCAGCTCAGCTCTGGAGGTGCGGGAGCGACGGTaGCGGCGACCTGAAGACTCTCGAAGACAGTTTTCC	+
Preference number: 6 (lower is better) Translates to: KISSALEVRERR*RRPEDSRRQFS Trigger: GGAAAACTGTCTTCGAGAGTCTTCAGGTCGCCGCCACCGTCGCTCCCGCACCTCCAGAGCTGAGCTGATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122446.2