Pregenerated sensors for H2-T3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054128Ensembl transcript IDs: ENSMUST00000025312.13, ENSMUST00000095300.3, ENSMUST00000097329.10, ENSMUST00000102675.10, ENSMUST00000172663.8, ENSMUST00000173133.8, ENSMUST00000173629.8, ENSMUST00000174101.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTGACAGGATaGAGATGTCCCCCAATGCCTGAGGACCAGGAAGGTTGGCTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: PCEETHAQDSVELTG*RCPPMPEDQEGWLC Trigger: GCACAGCCAACCTTCCTGGTCCTCAGGCATTGGGGGACATCTTCATCCTGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR TCA 90 bp | ACACTGTGCCGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTaGCAGGATGAAGATGTCCCCCAATGCCTGAGGACCAGGAAGGTT | + |
|
Preference number: 1 (lower is better) Translates to: TLCRVRRHTPRTAWS*QDEDVPQCLRTRKV Trigger: AACCTTCCTGGTCCTCAGGCATTGGGGGACATCTTCATCCTGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACGGCACAGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR TCA 90 bp | TCCTACGGAGCTCTGTATAACCAGCCTGCTCCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTGCTGCTGTCCACGTTTTCAGATCTT | + |
|
Preference number: 1 (lower is better) Translates to: SYGALYNQPAPTCFW*SLLPCLLLSTFSDL Trigger: AAGATCTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGTTATACAGAGCTCCGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR GCA 90 bp | CTCTGTATAACCAGCCTGCTCCCACTTGCTTCTGGTGATCTCTGCTaGCGTGTCTGCTGCTGTCCACGTTTTCAGATCTTCATTGAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: LCITSLLPLASGDLC*RVCCCPRFQIFIEG Trigger: GCCCTCAATGAAGATCTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGTTATACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR TCA 90 bp | TCTCTGCTGCCGTGTCTGCTGCTGTCCACGTTTTCAGATCTTCATTaGGGGCAATGTAATCGCGGCCATCATAGCCATGCTGCTCATAAG | + |
|
Preference number: 1 (lower is better) Translates to: SLLPCLLLSTFSDLH*GQCNRGHHSHAAHK Trigger: CTTATGAGCAGCATGGCTATGATGGCCGCGATTACATTGCCCTCAATGAAGATCTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR TCA 90 bp | TCCAACACACCAGAAGAAGGCATTGCATGCTATTACATATGGTTGTaGGCCACCATGTGGTTGCTGGGGATTGAATTCAGGGCCTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SNTPEEGIACYYIWL*ATMWLLGIEFRASG Trigger: TCCTGAGGCCCTGAATTCAATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTTCTGGTGTGTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACACACTGTGCCGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTGACAATGTCCCCCAATGCCTaGGGACCAGGAAGGTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RHTVPCEETHAQDSVELTMSPNA*GPGRLA Trigger: AGCCAACCTTCCTGGTCCTCAGGCATTGGGGGACAT...TGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACGGCACAGTGTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACACACTGTGCCGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTGACACAGTCCTTTCCAGTTTaGCTCAGCCCCAATCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RHTVPCEETHAQDSVELTQSFPV*LSPNPR Trigger: CCTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTG...TGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACGGCACAGTGTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCCCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QKEDPSSQLPPRVPQIQPPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...GGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCTCCCAAGTGCTAGGATTAATGGCCTGCCCACCACTGCCTGACATCCACGCAGCTGTCCCAAGATaGAGAACAAGAGTCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGLMACPPLPDIHAAVPR*RTRVRA Trigger: TGCCCTGACTCTTGTTCTTCATCTTGGGACAGCTGC...GTGGATGTCAGGCAGTGGTGGGCAGGCCATTAATCCTAGCACTTGGGAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCCATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QKEDPSSQLPPRVPQIQPHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...GGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGTTGGGCATACTGGTCTGAGGAGGCTCCCATCTCAGGGTGAGAGGCTCAGGTGTTCCCTCTCATTCTaGTATGCAGCAGTGTTATCG | + |
|
Preference number: 2 (lower is better) Translates to: PVGHTGLRRLPSQGERLRCSLSF*YAAVLS Trigger: CGATAACACTGCTGCATATCAGAATGAGAGGGAACA...CCTGAGCCTCTCACCCTGAGATGGGAGCCTCCTCAGACCAGTATGCCCAACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGGAACTCACTCTGTAAACCAGGCTGCCCTCGAACTCAGAAATCTGCCTGCCAGTCCTTTCCAGTTTaGCTCAGCCCCAATCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SWNSLCKPGCPRTQKSACQSFPV*LSPNPR Trigger: CCTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTG...GCAGGCAGATTTCTGAGTTCGAGGGCAGCCTGGTTTACAGAGTGAGTTCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR-3UTR TCA 90 bp | CCGAGGGCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGTGTTATCCCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PRAQGQVFPLILICSSVIPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...GATAACACTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGCCCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCCCCTCATGGTACACATaGCATGTGTATTTCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QKEDPSSQLPPRVPQIQPPSWYT*HVYFCS Trigger: GGAGCAGAAATACACATGTCATGTGTACCATGAGGG...GGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGTGTTATCGTCTCCCCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: AQGQVFPLILICSSVIVSPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...GGAGACGATAACACTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATGTAGGGTCTGAGTCTTaGTGTGCAGGGGCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RHCMLLHMVVSHHVVAGDVGSES*CAGAGC Trigger: ACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC...ATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCGTGTTTTTGGAGGATCTaGGGAGAAGAGTTGGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRKILHPSFHPECLRFSPCFWRI*GEELES Trigger: ACTTTCCAACTCTTCTCCTCAGATCCTCCAAAAACA...CGGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGAGGGCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGTGTTATCTGTTCCCTCTCATTCTaGTATGCAGCAGTGTTATCG | + |
|
Preference number: 2 (lower is better) Translates to: PRAQGQVFPLILICSSVICSLSF*YAAVLS Trigger: CGATAACACTGCTGCATATCAGAATGAGAGGGAACA...GATAACACTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGCCCTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGTCGAACTCAGAAATCTaGCTGCCTCTGCCTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KKALHAITYGCEPPCGCWSNSEI*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGA...CCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACGAACAGTGGTCCTGCATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LIKPKMIIAPRRARTVVLHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...CAGGACCACTGTTCGTGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGATTCATTTATTTCATGTAGGTGAGTACACTGTAGGTGACTTCCAACACACCACACACTGTGCCGTGTaGGGAGACACACGCCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KIHLFHVGEYTVGDFQHTTHCAV*GDTRPG Trigger: TCCTGGGCGTGTGTCTCCTCACACGGCACAGTGTGT...GGTGTGTTGGAAGTCACCTACAGTGTACTCACCTACATGAAATAAATGAATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGGCCTCAGGAAAAGAACTCAGTGCTCTTAACCACTGAGACTTCTCTCCAGCTGACATCCACATTCTaGTTCTCATGTTCAGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SGPQEKNSVLLTTETSLQLTSTF*FSCSVW Trigger: CCACACTGAACATGAGAATCAGAATGTGGATGTCAG...CTGGAGAGAAGTCTCAGTGGTTAAGAGCACTGAGTTCTTTTCCTGAGGCCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGCAGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCACCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: MQQCYRLRFHHCSFSSTSPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...TGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTTGGAAAGTTTGGGCATCAAATATCTTTCCTGGTGACTCCAGAAGTGTCTCAGGGAATCCTTGCATaGGCCCTCCAAGTAGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVGKFGHQISFLVTPEVSQGILA*ALQVGP Trigger: AGGACCTACTTGGAGGGCCCATGCAAGGATTCCCTG...AGACACTTCTGGAGTCACCAGGAAAGATATTTGATGCCCAAACTTTCCAACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATACCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SPFPPLFFLIHIITLPLIPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...TATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLSSPFPPLFFLIHIITLPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...AAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGCTCTGTAAACCAGGCTaGCCTCGAACTCAGAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: KKALHAITYGCEPPCGCWLCKPG*PRTQKS Trigger: AGATTTCTGAGTTCGAGGGCAGCCTGGTTTACAGAG...CCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATATCCTCCCCATTCAACTaGCAGGTCAGGGTGATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SPFPPLFFLIHIITLPLISSPFN*QVRVMS Trigger: TGACATCACCCTGACCTGGCAGTTGAATGGGGAGGA...TATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCTCTGCTGCCGTGTCTaGTGCTGTCCACGTTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLSSPFPPLFFLIHIITLLCCRV*CCPRFQ Trigger: CTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAG...AAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGTCAGGGCAGTCAATGTaGAAACATCTCAAAGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: KKALHAITYGCEPPCGCWSGQSM*KHLKGL Trigger: AAGGCCTTTGAGATGTTTTCACATTGACTGCCCTGA...CCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR-3UTR TCA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IITLPLIKPKMIIAPRRAPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATCCCTCATGGTACACATaGCATGTGTATTTCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VSVSTIVLSHPHHNTSAHPSWYT*HVYFCS Trigger: GGAGCAGAAATACACATGTCATGTGTACCATGAGGG...ATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACGAACACCCTCATGGTACACATaGCATGTGTATTTCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: TLPLIKPKMIIAPRRARTPSWYT*HVYFCS Trigger: GGAGCAGAAATACACATGTCATGTGTACCATGAGGG...TGTTCGTGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: IITLPLIKPKMIIAPRRAHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATAAAACCTCCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: FPPLFFLIHIITLPLIKPPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...AGGTTTTATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTGGAGGATCTGAGGAGAAGAGTTGGAAAGTTTGGGCATCAAATATCTTTCCATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FLEDLRRRVGKFGHQISFHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...GAAAGATATTTGATGCCCAAACTTTCCAACTCTTCTCCTCAGATCCTCCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACGAACATGTTTTTGGAGGATCTaGGGAGAAGAGTTGGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: TLPLIKPKMIIAPRRARTCFWRI*GEELES Trigger: ACTTTCCAACTCTTCTCCTCAGATCCTCCAAAAACA...TGTTCGTGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATTCTGAGGAGAAGAGTTaGAAAGTTTGGGCATCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: VSVSTIVLSHPHHNTSAHSEEKS*KVWASN Trigger: ATTTGATGCCCAAACTTTCCAACTCTTCTCCTCAGA...ATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCATGTTTTTGGAGGATCTaGGGAGAAGAGTTGGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IITLPLIKPKMIIAPRRACFWRI*GEELES Trigger: ACTTTCCAACTCTTCTCCTCAGATCCTCCAAAAACA...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR TCA 72 bp | CGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTaGCAGGATGAAGATGTCCCCCAATGCCTGAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: RVRRHTPRTAWS*QDEDVPQCLRT Trigger: GGTCCTCAGGCATTGGGGGACATCTTCATCCTGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR TCA 72 bp | AGAGCACGAACAGTGGTCCTGTTGGGCATACTGGTCTaGGGAGGCTCCCATCTCAGGGTGAGAGGCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RARTVVLLGILV*GGSHLRVRGSG Trigger: GCCTGAGCCTCTCACCCTGAGATGGGAGCCTCCTCAGACCAGTATGCCCAACAGGACCACTGTTCGTGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR GCA 72 bp | CCAGGCTGCCCTCGAACTCAGAAATCTGCCTGCCTCTaGCTCCCAAGTGCTAGGATTAATGGCCTGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PGCPRTQKSACL*LPSARINGLPT Trigger: GGTGGGCAGGCCATTAATCCTAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGGCAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR TCA 72 bp | CGTGGAGCTGACAGGATGAAGATGTCCCCCAATGCCTaGGGACCAGGAAGGTTGGCTGTGCAAGGGATGACA | + |
|
Preference number: 3 (lower is better) Translates to: RGADRMKMSPNA*GPGRLAVQGMT Trigger: TGTCATCCCTTGCACAGCCAACCTTCCTGGTCCTCAGGCATTGGGGGACATCTTCATCCTGTCAGCTCCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCAAGTGCTAGGATTAATGGCCTaGCCACCACTGCCTGACATCCACATTCTGATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PASASQVLGLMA*PPLPDIHILIL Trigger: GAGAATCAGAATGTGGATGTCAGGCAGTGGTGGGCAGGCCATTAATCCTAGCACTTGGGAGGCAGAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR GCA 72 bp | ACCAGCCTGCTCCCACTTGCTTCTGGTGATCTCTGCTaGCGTGTCTGCTGCTGTCCACGTTTTCAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TSLLPLASGDLC*RVCCCPRFQIF Trigger: GAAGATCTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR GCA 72 bp | TGTAAACCAGGCTGCCCTCGAACTCAGAAATCTGCCTaGCTCTGCCTCCCAAGTGCTAGGATTAATGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CKPGCPRTQKSA*LCLPSARINGL Trigger: CAGGCCATTAATCCTAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGGCAGCCTGGTTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR GCA 72 bp | ATAACCAGCCTGCTCCCACTTGCTTCTGGTGATCTCTaGTGCCGTGTCTGCTGCTGTCCACGTTTTCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ITSLLPLASGDL*CRVCCCPRFQI Trigger: GATCTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR CCA 72 bp | GTGCAAGGGATGACAGCTAATGTAGGGTCTGAGTCTTaGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VQGMTANVGSES*CAGAGCALQIF Trigger: GAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTACATTAGCTGTCATCCCTTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCGTCTCCGTTTCCACCATaGTTCTTTCTCATCCACATC | + |
|
Preference number: 3 (lower is better) Translates to: RRKILHPSFHPECLRFSPSPFPP*FFLIHI Trigger: GATGTGGATGAGAAAGAACAATGGTGGAAACGGAGA...CGGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| 3UTR GCA 72 bp | CCACTTGCTTCTGGTGATCTCTGCTGCCGTGTCTGCTaGTGTCCACGTTTTCAGATCTTCATTGAGGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PLASGDLCCRVC*CPRFQIFIEGN Trigger: ATTGCCCTCAATGAAGATCTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR-3UTR CAA 90 bp | AACATCTCAAAGGCCTTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGCCCAGTGCCAGTCCTTTCCAGTTaGCCTCAGCCCCAATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NISKAFLSFKGLNRKGPVPVLSS*PQPQSQ Trigger: CTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTGG...CACTGGGCCTTTCCTATTTAAACCTTTGAACGAGAGGAAGGCCTTTGAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR TCA 72 bp | CATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATTaGATTCAGGGCCTCAGGAAAAGAACTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HMVVSHHVVAGD*IQGLRKRTQCS Trigger: AGAGCACTGAGTTCTTTTCCTGAGGCCCTGAATTCAATCCCCAGCAACCACATGGTGGCTCACAACCATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCAGAAGTCAGAACTAGTGACTCAGTCCCATGTGGCAGCTGTCCCAAGATGAGAGAGAAGCTGTCCTaGCCTGCAGTAGAAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CSEVRTSDSVPCGSCPKMREKLS*PAVEEV Trigger: TACTTCTTCTACTGCAGGCAAGGACAGCTTCTCTCT...CATCTTGGGACAGCTGCCACATGGGACTGAGTCACTAGTTCTGACTTCTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCCTCAGGAAAAGAACTCAGTGCTCTTAACCACTGAGACTTCTCTCCAGAGAGAGAAGCTGTCCTaGCCTGCAGTAGAAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SGPQEKNSVLLTTETSLQREKLS*PAVEEV Trigger: TACTTCTTCTACTGCAGGCAAGGACAGCTTCTCTCT...CTGGAGAGAAGTCTCAGTGGTTAAGAGCACTGAGTTCTTTTCCTGAGGCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGTGAGTACACTGTAGGTGACTTCCAACACACCAGAAGAAGGCATTGCATGAGAGAGAAGCTGTCCTaGCCTGCAGTAGAAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VGEYTVGDFQHTRRRHCMREKLS*PAVEEV Trigger: TACTTCTTCTACTGCAGGCAAGGACAGCTTCTCTCT...CATGCAATGCCTTCTTCTGGTGTGTTGGAAGTCACCTACAGTGTACTCACCTAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCAGCCTGCTCCCACTaGCTTCTGGTGATCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSSPFPPLFFLIHIITLPACSH*LLVISA Trigger: AGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGG...AAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR TCA 72 bp | AGGGCCTCAGGAAAAGAACTCAGTGCTCTTAACCACTaGGACTTCTCTCCAGCCTCCACATTCAGATTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RASGKELSALNH*DFSPASTFRFF Trigger: AAAGAATCTGAATGTGGAGGCTGGAGAGAAGTCTCAGTGGTTAAGAGCACTGAGTTCTTTTCCTGAGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR TCA 72 bp | CCAGAAGAAGGCATTGCATGCTATTACATATGGTTGTaGGCCACCATGTGGTTGCTGGGGATTGAATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGIACYYIWL*ATMWLLGIEFR Trigger: CCTGAATTCAATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATGTGAAAACATCTCAAAGGCCTTCCTCTCGTTCAAAGGTTTAAATAGGAAACCAGTCCTTTCCAGTTaGCCTCAGCCCCAATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QCENISKAFLSFKGLNRKPVLSS*PQPQSQ Trigger: CTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTGG...TTTCCTATTTAAACCTTTGAACGAGAGGAAGGCCTTTGAGATGTTTTCACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGTGTTATCGTCTCCGAAGAGTTGGAAAGTTaGGGCATCAAATATCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AQGQVFPLILICSSVIVSEELES*GIKYLS Trigger: GGAAAGATATTTGATGCCCAAACTTTCCAACTCTTC...GGAGACGATAACACTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| 3UTR TCA 72 bp | TCCCAAGATGAAGAACAAGAGTCAGGGCAGTCAATGTaGAAACATCTCAAAGGCCTTCCTCTCGTTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQDEEQESGQSM*KHLKGLPLVQR Trigger: CCTTTGAACGAGAGGAAGGCCTTTGAGATGTTTTCACATTGACTGCCCTGACTCTTGTTCTTCATCTTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| 3UTR GCA 72 bp | ACTGTAGGTGACTTCCAACACACCAGAAGAAGGCATTaGATGCTATTACATATGGTTGTGAGCCACCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVGDFQHTRRRH*MLLHMVVSHHV Trigger: CACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTTCTGGTGTGTTGGAAGTCACCTACAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| 3UTR CCA 72 bp | GTTTTTGGAGGATCTGAGGAGAAGAGTTGGAAAGTTTaGGCATCAAATATCTTTCCTGGTGACTCCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VFGGSEEKSWKV*ASNIFPGDSRS Trigger: ACTTCTGGAGTCACCAGGAAAGATATTTGATGCCCAAACTTTCCAACTCTTCTCCTCAGATCCTCCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKEDPSSQLPPRVPQIQPGQVWV*PCEAAR Trigger: CCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCC...GGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCAGTACCTCAGCGAGTGTaGGCCTGGGCAGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGSESWCAGAGCALQIFPVPQRV*AWAGLG Trigger: ACCCAGACCTGCCCAGGCTCACACTCGCTGAGGTAC...TGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCGTACCTCAGCGAGTGTaGGCCTGGGCAGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKEDPSSQLPPRVPQIQPVPQRV*AWAGLG Trigger: ACCCAGACCTGCCCAGGCTCACACTCGCTGAGGTAC...GGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172663.8 ENSMUST00000173629.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTAGGATTAATGGCCTGCCCACCACTGCCTGACATCCACGAGCCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASQVLGLMACPPLPDIHEPGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGGCTC...GTGGATGTCAGGCAGTGGTGGGCAGGCCATTAATCCTAGCACTTGGGAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCCCAGTGACCCAGTCCTTTCCAGTTTGCCTCAGCCCCAATCCCAGGCTCCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPSDPVLSSLPQPQSQAPTCFW*SLLPCL Trigger: CAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGG...AGCCTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTGGGTCACTGGGCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR TCA 90 bp | AGACACACTGTGCCGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTGACACCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHTVPCEETHAQDSVELTPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...TGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACGGCACAGTGTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | AATGTAATCGCGGCCATCATAGCCATGCTGCTCATAAGCGCGGAAGAGGCTCCCGAGCCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVIAAIIAMLLISAEEAPEPGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGGCTC...GGGAGCCTCTTCCGCGCTTATGAGCAGCATGGCTATGATGGCCGCGATTACATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTAGGTCCTACGGAGCTCTGTATAACCAGCCTGCTCCCACTTGCTTCTGGTGTACCTCAGCGAGTGTaGGCCTGGGCAGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVGPTELCITSLLPLASGVPQRV*AWAGLG Trigger: ACCCAGACCTGCCCAGGCTCACACTCGCTGAGGTAC...ACCAGAAGCAAGTGGGAGCAGGCTGGTTATACAGAGCTCCGTAGGACCTACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGAACTCACTCTGTAAACCAGGCTGCCCTCGAACTCAGAAATCTGCCTGCGAGCCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWNSLCKPGCPRTQKSACEPGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGGCTC...GCAGGCAGATTTCTGAGTTCGAGGGCAGCCTGGTTTACAGAGTGAGTTCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCAGGCACGGCTGCCCAAAGTGATTCCACTGTTCAGAAGTCAGAACTAGTGGAGCCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAGTAAQSDSTVQKSELVEPGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGGCTC...CACTAGTTCTGACTTCTGAACAGTGGAATCACTTTGGGCAGCCGTGCCTGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACTGTGCCGTGTGAGGAGACACACGCCCAGGACAGCGTGGAGCTGACACATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHTVPCEETHAQDSVELTHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...TGTCAGCTCCACGCTGTCCTGGGCGTGTGTCTCCTCACACGGCACAGTGTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCGAATGACTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRSFIPASTPSASDSARMTGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGTCAT...TCGGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCCCAGTGACCCAGTCCTTTCCAGTTTGCCTCAGCCCCAATCCCAGGCTCCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERPSDPVLSSLPQPQSQAPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...AGCCTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTGGGTCACTGGGCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCACCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSESWCAGAGCALQIFPPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...TGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCACTCTGCTGCCGTGTCTaGTGCTGTCCACGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGSESWCAGAGCALQIFPLCCRV*CCPRFQ Trigger: CTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAG...TGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCCTCAGGAAAAGAACTCAGTGCTCTTAACCACTGAGACTTCTCTCCAGGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGPQEKNSVLLTTETSLQGQVWV*PCEAAR Trigger: CCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCC...CTGGAGAGAAGTCTCAGTGGTTAAGAGCACTGAGTTCTTTTCCTGAGGCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCATTGCAGGGAATCCTTGCATaGGCCCTCCAAGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSESWCAGAGCALQIFPLQGILA*ALQVGP Trigger: AGGACCTACTTGGAGGGCCCATGCAAGGATTCCCTG...CAATGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTCCCAAGTGCTAGGATTAATGGCCTGCCCACCACTGCCTGACATCCACCCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SASQVLGLMACPPLPDIHPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...GTGGATGTCAGGCAGTGGTGGGCAGGCCATTAATCCTAGCACTTGGGAGGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGCCCGAGGGCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGCACCTGGGAAGGAAATaGCTGGGCAGGTCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQPEGSGTSVPSHSDMQQHLGRK*LGRSGS Trigger: AGACCCAGACCTGCCCAGTCATTTCCTTCCCAGGTG...CTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGCCCTCGGGCTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCCTCAGGAAAAGAACTCAGTGCTCTTAACCACTGAGACTTCTCTCCAGGGAGGATCAGGAGGGTaGCAGGCACCATGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPQEKNSVLLTTETSLQGGSGG*QAPWSP Trigger: TGGGGACCATGGTGCCTGGCACCCTCCTGATCCTCC...CTGGAGAGAAGTCTCAGTGGTTAAGAGCACTGAGTTCTTTTCCTGAGGCCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCACATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGSESWCAGAGCALQIFPHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...TGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGAGTACACTGTAGGTGACTTCCAACACACCAGAAGAAGGCATTGCATGCTGGGTCTGGCCTTGTaGGGCAGCCAGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGEYTVGDFQHTRRRHCMLGLAL*GSQEDQ Trigger: CTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAG...CATGCAATGCCTTCTTCTGGTGTGTTGGAAGTCACCTACAGTGTACTCACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTAGTACCTCAGCGAGTGTaGGCCTGGGCAGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WQLFKYPETREKLSLPAVVPQRV*AWAGLG Trigger: ACCCAGACCTGCCCAGGCTCACACTCGCTGAGGTAC...TACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTAGGAGGATCAGGAGGGTaGCAGGCACCATGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WQLFKYPETREKLSLPAVGGSGG*QAPWSP Trigger: TGGGGACCATGGTGCCTGGCACCCTCCTGATCCTCC...TACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCAGGCACGGCTGCCCAAAGTGATTCCACTGTTCAGAAGTCAGAACTAGTGCAGGGAATCCTTGCATaGGCCCTCCAAGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAGTAAQSDSTVQKSELVQGILA*ALQVGP Trigger: AGGACCTACTTGGAGGGCCCATGCAAGGATTCCCTG...CACTAGTTCTGACTTCTGAACAGTGGAATCACTTTGGGCAGCCGTGCCTGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGCTGGGTCTGGCCTTGTaGGGCAGCCAGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKALHAITYGCEPPCGCWLGLAL*GSQEDQ Trigger: CTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAG...CCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCATTGCCCTCATGGTACACATaGCATGTGTATTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSESWCAGAGCALQIFPLPSWYT*HVYFCS Trigger: GGAGCAGAAATACACATGTCATGTGTACCATGAGGG...CAATGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | CCGAGGGCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGTGTTATCCTCCAGAAGTGTCTGTaGGGCCACCTGGGAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRAQGQVFPLILICSSVILQKCL*GHLGRK Trigger: TTTCCTTCCCAGGTGGCCTCACAGACACTTCTGGAG...GATAACACTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGCCCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCCTCCCAAGTGCTAGGATTAATGGCCTGCCCACCACTGCCTGACATCCACTGCTGCCGTGTCTGCTaGATTTTGACTCAGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SASQVLGLMACPPLPDIHCCRVC*ILTQVV Trigger: TACAACCTGAGTCAAAATGCAGCAGACACGGCAGCA...GTGGATGTCAGGCAGTGGTGGGCAGGCCATTAATCCTAGCACTTGGGAGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCAGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQQCYRLRFHHCSFSSTSGQVWV*PCEAAR Trigger: CCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCC...TGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGGACAAGTGTTCCCTCTCATTCTGATATGCAGCAGTGTTATCGTCTCCTGGGAAGGAAATGACTaGGCAGGTCTGGGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQGQVFPLILICSSVIVSWEGND*AGLGLA Trigger: GGCCAGACCCAGACCTGCCCAGTCATTTCCTTCCCA...GGAGACGATAACACTGCTGCATATCAGAATGAGAGGGAACACTTGTCCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCACTGGGTCTGGCCTTGTaGGGCAGCCAGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MQQCYRLRFHHCSFSSTSLGLAL*GSQEDQ Trigger: CTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAG...TGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATCTGGGTCTGGCCTTGTaGGGCAGCCAGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVSTIVLSHPHHNTSAHLGLAL*GSQEDQ Trigger: CTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAG...ATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTAGAAGAAGTACCTCAGCGAGTGTaGGCCTGGGCAGGTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFKYPETREKLSLPAVEEVPQRV*AWAGLG Trigger: ACCCAGACCTGCCCAGGCTCACACTCGCTGAGGTAC...TTCTTCTACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTACCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQLFKYPETREKLSLPAVPTCFW*SLLPCL Trigger: CAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGG...TACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | ATCCACATTCTGATTCTCATGTTCAGTGTGGAAATGAGTAGACACACTGTGCCGGGAGGATCAGGAGGGTaGCAGGCACCATGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHILILMFSVEMSRHTVPGGSGG*QAPWSP Trigger: TGGGGACCATGGTGCCTGGCACCCTCCTGATCCTCC...CGGCACAGTGTGTCTACTCATTTCCACACTGAACATGAGAATCAGAATGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACGAACAGAGCCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLPLIKPKMIIAPRRARTEPGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGGCTC...TGTTCGTGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172663.8 ENSMUST00000173629.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACGTCTGTGAGGCCACCTaGGCAGGTCTGGGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVIVSVSTIVLSHPHHNVCEAT*AGLGLA Trigger: GGCCAGACCCAGACCTGCCCAGGTGGCCTCACAGAC...GTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174101.8 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCATTGTATACTGTGCATTGCTTGTaGCGATCTCTGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SESWCAGAGCALQIFPLYTVHCL*RSLSLS Trigger: CGAGAGAGACAGAGATCGTCACAAGCAATGCACAGT...ATACAATGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACGGAGGATCAGGAGGGTaGCAGGCACCATGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVIVSVSTIVLSHPHHNGGSGG*QAPWSP Trigger: TGGGGACCATGGTGCCTGGCACCCTCCTGATCCTCC...GTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGCTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTACTGTGCATTGCTTGTaGCGATCTCTGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VAAFQVSRDKREAVLACSTVHCL*RSLSLS Trigger: CGAGAGAGACAGAGATCGTCACAAGCAATGCACAGT...ACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAGCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | ATCCACATTCTGATTCTCATGTTCAGTGTGGAAATGAGTAGACACACTGTGCCGCCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHILILMFSVEMSRHTVPPTCFW*SLLPCL Trigger: CAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGG...CGGCACAGTGTGTCTACTCATTTCCACACTGAACATGAGAATCAGAATGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCACCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MQQCYRLRFHHCSFSSTSPTCFW*SLLPCL Trigger: CAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGG...TGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGCCCAGTGACCCAGTCCTTTCCACCCAGCATCTCAGGGTaGCATAACCTTCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSFKGLNRKGPVTQSFPPSISG*HNLQVW Trigger: CCAGACCTGAAGGTTATGTCACCCTGAGATGCTGGG...TGGAAAGGACTGGGTCACTGGGCCTTTCCTATTTAAACCTTTGAACGAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCAGTTTGCCTCAGCCCCAATCCCAGGCTCCCAGGTGTCACCTTTTCAAGTTGTTCCCTCTCATTCTaGTATGCAGCAGTGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: FPVCLSPNPRLPGVTFSSCSLSF*YAAVLS Trigger: CGATAACACTGCTGCATATCAGAATGAGAGGGAACA...ACTTGAAAAGGTGACACCTGGGAGCCTGGGATTGGGGCTGAGGCAAACTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR TCA 90 bp | ACGGCAGGCACGGCTGCCCAAAGTGATTCCACTGTTCAGAAGTCAGAACTAGTGTGTTCCCTCTCATTCTaGTATGCAGCAGTGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: TAGTAAQSDSTVQKSELVCSLSF*YAAVLS Trigger: CGATAACACTGCTGCATATCAGAATGAGAGGGAACA...CACTAGTTCTGACTTCTGAACAGTGGAATCACTTTGGGCAGCCGTGCCTGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCAGGAGGATCAGGAGGGTaGCAGGCACCATGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IITLPLIKPKMIIAPRRAGGSGG*QAPWSP Trigger: TGGGGACCATGGTGCCTGGCACCCTCCTGATCCTCC...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095300.3 ENSMUST00000172663.8 ENSMUST00000173629.8 ENSMUST00000174101.8 |
||
| CDS-3UTR CCA 90 bp | AAGATTCATTTATTTCATGTAGGTGAGTACACTGTAGGTGACTTCCAACACACCGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLFHVGEYTVGDFQHTGQVWV*PCEAAR Trigger: CCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCC...GGTGTGTTGGAAGTCACCTACAGTGTACTCACCTACATGAAATAAATGAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | CTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACGAACAGTGGTCCTGCAGGGAATCCTTGCATaGGCCCTCCAAGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIKPKMIIAPRRARTVVLQGILA*ALQVGP Trigger: AGGACCTACTTGGAGGGCCCATGCAAGGATTCCCTG...CAGGACCACTGTTCGTGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGTTTGCCTCAGCCCCAATCCCAGGCTCCCAGGTGTCACCTTTTCAAGTCATACATCACCTGGATaGTGTGAGAGCCATTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPVCLSPNPRLPGVTFSSHTSPG*CESHFD Trigger: GTCAAAATGGCTCTCACACCATCCAGGTGATGTATG...ACTTGAAAAGGTGACACCTGGGAGCCTGGGATTGGGGCTGAGGCAAACTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102675.10 |
||
| 3UTR CAA 72 bp | ACATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATaGAATTCAGGGCCTCAGGAAAAGAACTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TYGCEPPCGCWG*NSGPQEKNSVL Trigger: GAGCACTGAGTTCTTTTCCTGAGGCCCTGAATTCAATCCCCAGCAACCACATGGTGGCTCACAACCATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | AAGATTCATTTATTTCATGTAGGTGAGTACACTGTAGGTGACTTCCAACACACCCTGGGTCTGGCCTTGTaGGGCAGCCAGGAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLFHVGEYTVGDFQHTLGLAL*GSQEDQ Trigger: CTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAG...GGTGTGTTGGAAGTCACCTACAGTGTACTCACCTACATGAAATAAATGAATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | TGCCGTGTCTGCTGCTGTCCACGTTTTCAGATCTTCATTGAGGGCAATGTAATCACTGTGCATTGCTTGTaGCGATCTCTGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CRVCCCPRFQIFIEGNVITVHCL*RSLSLS Trigger: CGAGAGAGACAGAGATCGTCACAAGCAATGCACAGT...GATTACATTGCCCTCAATGAAGATCTGAAAACGTGGACAGCAGCAGACACGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGAAGTCAGAACTAGTGACTCAGTCCCATGTGGCAGCTGTCCCAAGATGCCCTCATGGTACACATaGCATGTGTATTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSEVRTSDSVPCGSCPKMPSWYT*HVYFCS Trigger: GGAGCAGAAATACACATGTCATGTGTACCATGAGGG...CATCTTGGGACAGCTGCCACATGGGACTGAGTCACTAGTTCTGACTTCTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR TCA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACTCCAGAAGTGTCTGTaGGGCCACCTGGGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IITLPLIKPKMIIAPRRALQKCL*GHLGRS Trigger: AGACCTGCCCAGGTGGCCTCACAGACACTTCTGGAG...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174101.8 |
||
| CDS-3UTR CCA 90 bp | CAATGTGAAAACATCTCAAAGGCCTTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCENISKAFLSFKGLNRKGQVWV*PCEAAR Trigger: CCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCC...TTTCCTATTTAAACCTTTGAACGAGAGGAAGGCCTTTGAGATGTTTTCACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR CCA 90 bp | ATCCACATTCTGATTCTCATGTTCAGTGTGGAAATGAGTAGACACACTGTGCCGCAGGGAATCCTTGCATaGGCCCTCCAAGTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHILILMFSVEMSRHTVPQGILA*ALQVGP Trigger: AGGACCTACTTGGAGGGCCCATGCAAGGATTCCCTG...CGGCACAGTGTGTCTACTCATTTCCACACTGAACATGAGAATCAGAATGTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGCCCAGTGACCCAGTCCTTTCCACATAACCTTCAGGTCTaGGGTGATGGGTCACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSFKGLNRKGPVTQSFPHNLQV*GDGSRV Trigger: CACACGTGACCCATCACCCCAGACCTGAAGGTTATG...TGGAAAGGACTGGGTCACTGGGCCTTTCCTATTTAAACCTTTGAACGAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR CCA 90 bp | AGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATTCAGGAGACCAATGGTaGGGCAGAAGGAAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHCMLLHMVVSHHVVAGDSGDQW*GRRKIL Trigger: AAGGATCTTCCTTCTGCCCCACCATTGGTCTCCTGA...ATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGAGTACACTGTAGGTGACTTCCAACACACCAGAAGAAGGCATTGCATGTCAGGAGACCAATGGTaGGGCAGAAGGAAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGEYTVGDFQHTRRRHCMSGDQW*GRRKIL Trigger: AAGGATCTTCCTTCTGCCCCACCATTGGTCTCCTGA...CATGCAATGCCTTCTTCTGGTGTGTTGGAAGTCACCTACAGTGTACTCACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATAAAACCTCCACCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPLFFLIHIITLPLIKPPPGQV*VWPCEA Trigger: TGCCTCACAAGGCCAGACCCAGACCTGCCCAGGTGG...AGGTTTTATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174101.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGCCCAGTGACCCAGTCCTTTCCAACTGTGCATTGCTTGTaGCGATCTCTGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLSFKGLNRKGPVTQSFPTVHCL*RSLSLS Trigger: CGAGAGAGACAGAGATCGTCACAAGCAATGCACAGT...TGGAAAGGACTGGGTCACTGGGCCTTTCCTATTTAAACCTTTGAACGAGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGAGTACACTGTAGGTGACTTCCAACACACCAGAAGAAGGCATTGCATGCCCTCATGGTACACATaGCATGTGTATTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGEYTVGDFQHTRRRHCMPSWYT*HVYFCS Trigger: GGAGCAGAAATACACATGTCATGTGTACCATGAGGG...CATGCAATGCCTTCTTCTGGTGTGTTGGAAGTCACCTACAGTGTACTCACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | CCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATAAAACTCCAGAAGTGTCTGTaGGGCCACCTGTGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFPPLFFLIHIITLPLIKLQKCL*GHLCTP Trigger: AGGAGTGCACAGGTGGCCTCACAGACACTTCTGGAG...TTTTATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGTCAGGAGACCAATGGTaGGGCAGAAGGAAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKALHAITYGCEPPCGCWSGDQW*GRRKIL Trigger: AAGGATCTTCCTTCTGCCCCACCATTGGTCTCCTGA...CCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCAGTGTTATCGTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCAACTGTGCATTGCTTGTaGCGATCTCTGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: MQQCYRLRFHHCSFSSTSTVHCL*RSLSLS Trigger: CGAGAGAGACAGAGATCGTCACAAGCAATGCACAGT...TGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGACGATAACACTGCTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172663.8 ENSMUST00000173629.8 |
||
| CDS-3UTR TCA 90 bp | AGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATTGTTCCCTCTCATTCTaGTATGCAGCAGTGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: RHCMLLHMVVSHHVVAGDCSLSF*YAAVLS Trigger: CGATAACACTGCTGCATATCAGAATGAGAGGGAACA...ATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACTCTGCTGCCGTGTCTaGTGCTGTCCACGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IITLPLIKPKMIIAPRRALCCRV*CCPRFQ Trigger: CTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAG...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTACATACATCACCTGGATaGTGTGAGAGCCATTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WQLFKYPETREKLSLPAVHTSPG*CESHFD Trigger: GTCAAAATGGCTCTCACACCATCCAGGTGATGTATG...TACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAGCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173133.8 |
||
| CDS-3UTR GCA 90 bp | AAGATTCATTTATTTCATGTAGGTGAGTACACTGTAGGTGACTTCCAACACACCCTCTGCTGCCGTGTCTaGTGCTGTCCACGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLFHVGEYTVGDFQHTLCCRV*CCPRFQ Trigger: CTGAAAACGTGGACAGCAGCAGACACGGCAGCAGAG...GGTGTGTTGGAAGTCACCTACAGTGTACTCACCTACATGAAATAAATGAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATAAAACCTGTCTGTGAGGCCACCTaGGAAGGAAATGACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPLFFLIHIITLPLIKPVCEAT*EGNDWA Trigger: TGCCCAGTCATTTCCTTCCCAGGTGGCCTCACAGAC...AGGTTTTATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS-3UTR CCA 90 bp | ACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCACGAACACATACATCACCTGGATaGTGTGAGAGCCATTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPLIKPKMIIAPRRARTHTSPG*CESHFD Trigger: GTCAAAATGGCTCTCACACCATCCAGGTGATGTATG...TGTTCGTGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTGAAAACATCTCAAAGGCCTTCCTCTCGTTCAAAGGTTTAAATAGGAAACCTTCAGGTCTGGGGTaGTGGGTCACGTGTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QCENISKAFLSFKGLNRKPSGLG*WVTCVF Trigger: AAAAACACACGTGACCCATCACCCCAGACCTGAAGG...TTTCCTATTTAAACCTTTGAACGAGAGGAAGGCCTTTGAGATGTTTTCACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS CCA 90 bp | GTGACTCCAGAAGTGTCTGTGAGGCCACCTGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGGAGGATCAGGAGGGTGCCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VTPEVSVRPPGQVWV*PCEAARRIRRVPGT Trigger: GGTGCCTGGCACCCTCCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGGTGGCCTCACAGACACTTCTGGAGTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174101.8 |
||
| CDS CCA 90 bp | GAAGTGTCTGTGAGGCCACCTGGGAAGGAAATGACTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCAGCCAGGAGGATCAGGAGGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVSVRPPGKEMTGQV*VWPCEAARRIRRVP Trigger: TGGCACCCTCCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGTCATTTCCTTCCCAGGTGGCCTCACAGACACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS-3UTR CAA 90 bp | ACGGCAGGCACGGCTGCCCAAAGTGATTCCACTGTTCAGAAGTCAGAACTAGTGATACTCGGGCCCCTCTaGCTCCACCCATGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: TAGTAAQSDSTVQKSELVILGPL*LHPWRT Trigger: AGTGCGCCATGGGTGGAGCAAGAGGGGCCCGAGTAT...CACTAGTTCTGACTTCTGAACAGTGGAATCACTTTGGGCAGCCGTGCCTGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGAAGATCCTTCATCCCAGCTTCCACCCCGAGTGCCTCAGATTCAGCCCCCAGCCTGCTCCCACTaGCTTCTGGTGATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QKEDPSSQLPPRVPQIQPPACSH*LLVISA Trigger: AGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGG...GGGCTGAATCTGAGGCACTCGGGGTGGAAGCTGGGATGAAGGATCTTCCTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCAGGGTCACGTGTGTTTTaGGAGGATCTGTGCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGSESWCAGAGCALQIFPGSRVF*EDLCTP Trigger: AGGAGTGCACAGATCCTCCAAAAACACACGTGACCC...TGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCATTGGGGTCACGTGTGTTTTaGGAGGATCTGTGCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSESWCAGAGCALQIFPLGSRVF*EDLCTP Trigger: AGGAGTGCACAGATCCTCCAAAAACACACGTGACCC...CAATGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATATACTCGGGCCCCTCTaGCTCCACCCATGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RHCMLLHMVVSHHVVAGDILGPL*LHPWRT Trigger: AGTGCGCCATGGGTGGAGCAAGAGGGGCCCGAGTAT...ATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCCCAGTGACCCAGTCCTTTCCAGTTTGCCTCAGCCCCAATCCCAGGCTGGTGTGAGAGCCATTTaGACTCAGGTTGTAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ERPSDPVLSSLPQPQSQAGVRAI*TQVVVV Trigger: GACTACTACAACCTGAGTCAAAATGGCTCTCACACC...AGCCTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTGGGTCACTGGGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102675.10 |
||
| CDS GCA 90 bp | ACCAGCCTGCTCCCACTTGCTTCTGGTGATCTCTGCTGCCGTGTCTaGTGCATTTTGACTCAGGTTGTAGTAGTCCAGCATAGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSLLPLASGDLCCRV*CILTQVVVVQHSLQ Trigger: CTGCAGACTATGCTGGACTACTACAACCTGAGTCAAAATGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS-3UTR CAA 90 bp | TTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGCCCAGTGACCCAGTCCTTTCCAATACTCGGGCCCCTCTaGCTCCACCCATGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: FLSFKGLNRKGPVTQSFPILGPL*LHPWRT Trigger: AGTGCGCCATGGGTGGAGCAAGAGGGGCCCGAGTAT...TGGAAAGGACTGGGTCACTGGGCCTTTCCTATTTAAACCTTTGAACGAGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR CAA 90 bp | GTAGGGTCTGAGTCTTGGTGTGCAGGGGCAGGCTGTGCTCTCCAGATTTTCCCACGTGTCTGCTGCATTTaGACTCAGGTTGTAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGSESWCAGAGCALQIFPRVCCI*TQVVVV Trigger: GACTACTACAACCTGAGTCAAAATGCAGCAGACACG...TGGGAAAATCTGGAGAGCACAGCCTGCCCCTGCACACCAAGACTCAGACCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGCTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTCCAGCCTGCTCCCACTaGCTTCTGGTGATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VAAFQVSRDKREAVLACSPACSH*LLVISA Trigger: AGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGG...ACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAGCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | ACGGCAGGCACGGCTGCCCAAAGTGATTCCACTGTTCAGAAGTCAGAACTAGTGGGGTCACGTGTGTTTTaGGAGGATCTGTGCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TAGTAAQSDSTVQKSELVGSRVF*EDLCTP Trigger: AGGAGTGCACAGATCCTCCAAAAACACACGTGACCC...CACTAGTTCTGACTTCTGAACAGTGGAATCACTTTGGGCAGCCGTGCCTGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCCCAGTGACCCAGTCCTTTCCAGTTTGCCTCAGCCCCAATCCCAGGCTTCTCCGTTTCCACCATaGTTCTTTCTCATCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: ERPSDPVLSSLPQPQSQASPFPP*FFLIHI Trigger: GATGTGGATGAGAAAGAACAATGGTGGAAACGGAGA...AGCCTGGGATTGGGGCTGAGGCAAACTGGAAAGGACTGGGTCACTGGGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS TCA 90 bp | TCCTACGGAGCTCTGTATAACCAGCCTGCTCCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTGCTGCATTTTGACTCAGGTTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYGALYNQPAPTCFW*SLLPCLLHFDSGCS Trigger: ACTACAACCTGAGTCAAAATGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGTTATACAGAGCTCCGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS-3UTR CAA 90 bp | GTCTCCGTTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATATACTCGGGCCCCTCTaGCTCCACCCATGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: VSVSTIVLSHPHHNTSAHILGPL*LHPWRT Trigger: AGTGCGCCATGGGTGGAGCAAGAGGGGCCCGAGTAT...ATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAACGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172663.8 ENSMUST00000173629.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTCTCGTTCAAAGGTTTAAATAGGAAAGGCCCAGTGACCCAGTCCTTTCCACCAGCCTGCTCCCACTaGCTTCTGGTGATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSFKGLNRKGPVTQSFPPACSH*LLVISA Trigger: AGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGG...TGGAAAGGACTGGGTCACTGGGCCTTTCCTATTTAAACCTTTGAACGAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS-3UTR CAA 90 bp | ATCATAACACTTCCGCTCATAAAACCTAAGATGATCATAGCTCCAAGGAGAGCAATACTCGGGCCCCTCTaGCTCCACCCATGGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: IITLPLIKPKMIIAPRRAILGPL*LHPWRT Trigger: AGTGCGCCATGGGTGGAGCAAGAGGGGCCCGAGTAT...TGCTCTCCTTGGAGCTATGATCATCTTAGGTTTTATGAGCGGAAGTGTTATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172663.8 ENSMUST00000173629.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTCAAGTATCCAGAGACAAGAGAGAAGCTGTCCTTGCCTGCAGTAGAAGAACCAGCCTGCTCCCACTaGCTTCTGGTGATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFKYPETREKLSLPAVEEPACSH*LLVISA Trigger: AGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGG...TTCTTCTACTGCAGGCAAGGACAGCTTCTCTCTTGTCTCTGGATACTTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGGGATGGTGTGAGAGCCATTTaGACTCAGGTTGTAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHCMLLHMVVSHHVVAGDGVRAI*TQVVVV Trigger: GACTACTACAACCTGAGTCAAAATGGCTCTCACACC...ATCCCCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGCATTGCATGCTATTACATATGGTTGTGAGCCACCATGTGGTTGCTGGTCTCCGTTTCCACCATaGTTCTTTCTCATCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: KKALHAITYGCEPPCGCWSPFPP*FFLIHI Trigger: GATGTGGATGAGAAAGAACAATGGTGGAAACGGAGA...CCAGCAACCACATGGTGGCTCACAACCATATGTAATAGCATGCAATGCCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000173133.8 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGTCTGCTGCTGTCCACGTTTTCAGATCTTCATTGAGGGCAATGTAATCCCATACATCACCATTTaGACTCAGGTTGTAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CRVCCCPRFQIFIEGNVIPYITI*TQVVVV Trigger: GACTACTACAACCTGAGTCAAAATGGTGATGTATGG...GATTACATTGCCCTCAATGAAGATCTGAAAACGTGGACAGCAGCAGACACGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173629.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCACCATTGTTCTTTCTCATCCACATCATAACACTTCCGCTCATAAAACCTGGTGTGAGAGCCATTTaGACTCAGGTTGTAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPPLFFLIHIITLPLIKPGVRAI*TQVVVV Trigger: GACTACTACAACCTGAGTCAAAATGGCTCTCACACC...AGGTTTTATGAGCGGAAGTGTTATGATGTGGATGAGAAAGAACAATGGTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172663.8 |
||
| CDS-3UTR CAA 90 bp | CAATGTGAAAACATCTCAAAGGCCTTCCTCTCGTTCAAAGGTTTAAATAGGAAATCTCCGTTTCCACCATaGTTCTTTCTCATCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: QCENISKAFLSFKGLNRKSPFPP*FFLIHI Trigger: GATGTGGATGAGAAAGAACAATGGTGGAAACGGAGA...TTTCCTATTTAAACCTTTGAACGAGAGGAAGGCCTTTGAGATGTTTTCACATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 |
||
| CDS CCA 72 bp | TACCTCAGCGAGTGTGAGCCTGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGGAGGATCAGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YLSECEPGQVWV*PCEAARRIRRV Trigger: CACCCTCCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGGCTCACACTCGCTGAGGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025312.13 ENSMUST00000102675.10 ENSMUST00000172663.8 ENSMUST00000173133.8 ENSMUST00000173629.8 |
||
| CDS CCA 72 bp | GAAGTGTCTGTGAGGCCACCTGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGGAGGATCAGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EVSVRPPGQVWV*PCEAARRIRRV Trigger: CACCCTCCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGGTGGCCTCACAGACACTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174101.8 |
||
| CDS CCA 72 bp | CCACCTGGGAAGGAAATGACTGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGGAGGATCAGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPGKEMTGQVWV*PCEAARRIRRV Trigger: CACCCTCCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGTCATTTCCTTCCCAGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095300.3 |
||
| CDS CCA 72 bp | TTATCGTCTCCGTTTCCACCTGGGCAGGTCTGGGTCTaGCCTTGTGAGGCAGCCAGGAGGATCAGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSPFPPGQVWV*PCEAARRIRRV Trigger: CACCCTCCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGGTGGAAACGGAGACGATAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097329.10 |
||
| CDS CCA 72 bp | GCAGTGTTATCGTCTCCGTTTCCACCTGGGCAGGTCTaGGTCTGGCCTTGTGAGGCAGCCAGGAGGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVLSSPFPPGQV*VWPCEAARRIR Trigger: CCTGATCCTCCTGGCTGCCTCACAAGGCCAGACCCAGACCTGCCCAGGTGGAAACGGAGACGATAACACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097329.10 |
||
| CDS TCA 72 bp | GCTCTGTATAACCAGCCTGCTCCCACTTGCTTCTGGTaGTCTCTGCTGCCGTGTCTGCTGCATTTTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALYNQPAPTCFW*SLLPCLLHFDS Trigger: TGAGTCAAAATGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAGCAGGCTGGTTATACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS GCA 72 bp | CTCCCACTTGCTTCTGGTGATCTCTGCTGCCGTGTCTaGTGCATTTTGACTCAGGTTGTAGTAGTCCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPLASGDLCCRV*CILTQVVVVQH Trigger: ATGCTGGACTACTACAACCTGAGTCAAAATGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS CAA 72 bp | GCTTCTGGTGATCTCTGCTGCCGTGTCTGCTGCATTTaGACTCAGGTTGTAGTAGTCCAGCATAGTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASGDLCCRVCCI*TQVVVVQHSLQ Trigger: CTGCAGACTATGCTGGACTACTACAACCTGAGTCAAAATGCAGCAGACACGGCAGCAGAGATCACCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||
| CDS GCA 72 bp | CCACTTGCTTCTGGTGATCTCTGCTGCCGTGTCTGCTaGATTTTGACTCAGGTTGTAGTAGTCCAGCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLASGDLCCRVC*ILTQVVVVQHS Trigger: ACTATGCTGGACTACTACAACCTGAGTCAAAATGCAGCAGACACGGCAGCAGAGATCACCAGAAGCAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025312.13 |
||