Pregenerated sensors for H2-Q4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035929Ensembl transcript IDs: ENSMUST00000081435.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTGCAGACCCGGAAGGTTGGCGGTGGAAGGGAACACAGGGCAATaGAGAGACAGGGTCCTGGTGTGTAGGCGAAGGCTGGGCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: HCRPGRLAVEGNTGQ*RDRVLVCRRRLGST Trigger: TGTGGAGCCCAGCCTTCGCCTACACACCAGGACCCTGTCTCTGCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR GCA 90 bp | CACAACACCATCCAACCGACTTTCCAAAGAACCCTTAGTTTCCACTaGAGACCCGGAAGGTTGGCGGTGGAAGGGAACACAGGGCAATGC | + |
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Preference number: 1 (lower is better) Translates to: HNTIQPTFQRTLSFH*RPGRLAVEGNTGQC Trigger: GCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAGTGGAAACTAAGGGTTCTTTGGAAAGTCGGTTGGATGGTGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR TCA 90 bp | CTGGGGCATATAAAGTTTGCTTGTCCAATGGGCCTCTCTTTCCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LGHIKFACPMGLSFQ*WPTRPSFDTYAARV Trigger: GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACAAGCAAACTTTATATGCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR TCA 90 bp | ACATGCTTGTTTTACAGAACATCCTCTCTCCTGTGTCTGCTTCAGTaGAATGTTCCTTCAGGAGTCGGCCTTAGCCTTTCACACCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: TCLFYRTSSLLCLLQ*NVPSGVGLSLSHLY Trigger: ATACAGGTGTGAAAGGCTAAGGCCGACTCCTGAAGGAACATTTCACTGAAGCAGACACAGGAGAGAGGATGTTCTGTAAAACAAGCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCTGTGTCTGCTTCAGTGAAATGTTCCTTCAGGAGTCGGCCTTAGCCTTTCCGGAAGGTTGGCGGTaGAAGGGAACACAGGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LSCVCFSEMFLQESALAFPEGWR*KGTQGN Trigger: ATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGG...AAAGGCTAAGGCCGACTCCTGAAGGAACATTTCACTGAAGCAGACACAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR-3UTR GCA 90 bp | TCATGTGTTTGCCCCAGCACAACACCATCCAACCGACTTTCCAAAGAACCCTTAGGGAACACAGGGCAATaGAGAGACAGGGTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SCVCPSTTPSNRLSKEPLGNTGQ*RDRVLV Trigger: CACCAGGACCCTGTCTCTGCATTGCCCTGTGTTCCC...TAAGGGTTCTTTGGAAAGTCGGTTGGATGGTGTTGTGCTGGGGCAAACACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGTACTGGGGCATATAAAGTTTGCTTGTCCAATGGGCCTCTCTTTCCAGACCCTTAGTTTCCACTaGAGACCCGGAAGGTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: SPVLGHIKFACPMGLSFQTLSFH*RPGRLA Trigger: CGCCAACCTTCCGGGTCTGCAGTGGAAACTAAGGGT...CTGGAAAGAGAGGCCCATTGGACAAGCAAACTTTATATGCCCCAGTACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR CCA 72 bp | TGGAAGGGAACACAGGGCAATGCAGAGACAGGGTCCTaGTGTGTAGGCGAAGGCTGGGCTCCACAATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: WKGTQGNAETGS*CVGEGWAPQFF Trigger: GAAGAATTGTGGAGCCCAGCCTTCGCCTACACACCAGGACCCTGTCTCTGCATTGCCCTGTGTTCCCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR CCA 72 bp | AAAGAACCCTTAGTTTCCACTGCAGACCCGGAAGGTTaGCGGTGGAAGGGAACACAGGGCAATGCAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: KEPLVSTADPEG*RWKGTQGNAET Trigger: TGTCTCTGCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAGTGGAAACTAAGGGTTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR TCA 72 bp | TTTTACAGAACATCCTCTCTCCTGTGTCTGCTTCAGTaGAATGTTCCTTCAGGAGTCGGCCTTAGCCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: FYRTSSLLCLLQ*NVPSGVGLSLS Trigger: TGAAAGGCTAAGGCCGACTCCTGAAGGAACATTTCACTGAAGCAGACACAGGAGAGAGGATGTTCTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR GCA 72 bp | CATGCTTGTTTTACAGAACATCCTCTCTCCTGTGTCTaGTTCAGTGAAATGTTCCTTCAGGAGTCGGCCTTA | + |
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Preference number: 3 (lower is better) Translates to: HACFTEHPLSCV*FSEMFLQESAL Trigger: TAAGGCCGACTCCTGAAGGAACATTTCACTGAAGCAGACACAGGAGAGAGGATGTTCTGTAAAACAAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR GCA 72 bp | CAAAGAATCCTTCATCACGCATCGCATCCTTTCACATaGTTGTTTTACAGAACATCCTCTCTCCTGTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: QRILHHASHPFT*LFYRTSSLLCL Trigger: CAGACACAGGAGAGAGGATGTTCTGTAAAACAAGCATGTGAAAGGATGCGATGCGTGATGAAGGATTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR-3UTR CAA 90 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCATAATTGTCATCCTTTCACATGCTaGTTTTACAGAACATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: YWLVHNVVPPIGLQIHNCHPFTC*FYRTSS Trigger: AGAGGATGTTCTGTAAAACAAGCATGTGAAAGGATG...ACAATTATGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR TCA 90 bp | CTGCAGACCCGGAAGGTTGGCGGTGGAAGGGAACACAGGGCAATGCAGAGACAGCGTAACCGACAGAGATaGACCGGGGCTCCCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LQTRKVGGGREHRAMQRQRNRQR*TGAPQG Trigger: GCCTTGGGGAGCCCCGGTTCATCTCTGTCGGTTACG...CTGTCTCTGCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | GAACCCTTAGTTTCCACTGCAGACCCGGAAGGTTGGCGGTGGAAGGGAACACAGCTGCTCCATCCACGGTaGCCGCGGCTCATATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: EPLVSTADPEGWRWKGTQLLHPR*PRLISR Trigger: CCGAGATATGAGCCGCGGGCACCGTGGATGGAGCAG...CTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAGTGGAAACTAAGGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | GAAGGGAACACAGGGCAATGCAGAGACAGGGTCCTGGTGTGTAGGCGAAGGCTGCCTTTGGAGGATCTGTaGGCAGCAGCGTCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EGNTGQCRDRVLVCRRRLPLEDL*AAASPS Trigger: GGAAGGAGACGCTGCTGCGCACAGATCCTCCAAAGG...CAGCCTTCGCCTACACACCAGGACCCTGTCTCTGCATTGCCCTGTGTTCCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR TCA 90 bp | CTGCAGACCCGGAAGGTTGGCGGTGGAAGGGAACACAGGGCAATGCAGAGACAGCCGTCAGATCTGTGGTaGCATGTCACATGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LQTRKVGGGREHRAMQRQPSDLW*HVTCAF Trigger: AAAGGCACATGTGACATGTCACCACAGATCTGACGG...CTGTCTCTGCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR CAA 72 bp | CAAAGAACCCTTAGTTTCCACTGCAGACCCGGAAGGTaGGCGGTGGAAGGGAACACAGGGCAATGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: QRTLSFHCRPGR*AVEGNTGQCRD Trigger: GTCTCTGCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAGTGGAAACTAAGGGTTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR CCA 90 bp | CTTCACATTGAGCCCATAGGCTCACAGGGAACATCAGGCGCTGTTCTCTGTGTGTGTCACATGTGCCTTTaGAGGATCTGTGCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHIEPIGSQGTSGAVLCVCHMCL*RICAQQ Trigger: CTGCTGCGCACAGATCCTCCAAAGGCACATGTGACA...CACACAGAGAACAGCGCCTGATGTTCCCTGTGAGCCTATGGGCTCAATGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR CCA 90 bp | CACGCATCGCATCCTTTCACATGCTTGTTTTACAGAACATCCTCTCTCCTGTGTATAACTCAGCAAGTGTaGGCCTGGAGGCAGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: HASHPFTCLFYRTSSLLCITQQV*AWRQGA Trigger: CGCGCCCTGCCTCCAGGCCCACACTTGCTGAGTTAT...ACACAGGAGAGAGGATGTTCTGTAAAACAAGCATGTGAAAGGATGCGATGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | GGGTTGCAGATCCATAATTGTGTCTTTAGCAAAGAATCCTTCATCACGCATCGCCAGGGTCTGGGCGACTaGCACCAGCAGAAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GLQIHNCVFSKESFITHRQGLGD*HQQKQH Trigger: ATGCTGCTTCTGCTGGTGGCAGTCGCCCAGACCCTG...GCGATGCGTGATGAAGGATTCTTTGCTAAAGACACAATTATGGATCTGCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | CTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCTTGTCCAATGGGCCTCTCTCCTCCCCATTCAACTaGCAGGTCAGGATGATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LAFPCTGAYKVCLSNGPLSSPFN*QVRMML Trigger: TAACATCATCCTGACCTGGCAGTTGAATGGGGAGGA...GAGAGGCCCATTGGACAAGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR CCA 90 bp | GTCTGCTTCAGTGAAATGTTCCTTCAGGAGTCGGCCTTAGCCTTTCACACCTGTTCTGCTCATTGCCCTTaGCTTTCTGTGTTTCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VCFSEMFLQESALAFHTCSAHCP*LSVFPA Trigger: AGCGGGAAACACAGAAAGCCAAGGGCAATGAGCAGA...ACAGGTGTGAAAGGCTAAGGCCGACTCCTGAAGGAACATTTCACTGAAGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | GTCTGCTTCAGTGAAATGTTCCTTCAGGAGTCGGCCTTAGCCTTTCACACCTGTTTCACTCGGAAAATCTaGTCATTGCCCTTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCFSEMFLQESALAFHTCFTRKI*SLPLAF Trigger: GAAAGCCAAGGGCAATGAGCAGATTTTCCGAGTGAA...ACAGGTGTGAAAGGCTAAGGCCGACTCCTGAAGGAACATTTCACTGAAGCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | GGGTTGCAGATCCATAATTGTGTCTTTAGCAAAGAATCCTTCATCACGCATCGCGTGACATGTCACATGTaGCTTTGGAGGATCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: GLQIHNCVFSKESFITHRVTCHM*LWRICA Trigger: CGCACAGATCCTCCAAAGGCACATGTGACATGTCAC...GCGATGCGTGATGAAGGATTCTTTGCTAAAGACACAATTATGGATCTGCAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTTTTACAGAACATCCTCTCTCCTGTGTCTGCTTCAGTGAAATGTTCCTTCTACGTTCGCCATGTTaGAGACAGTGGATGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ACFTEHPLSCVCFSEMFLLRSPC*RQWMEE Trigger: CTCCTCCATCCACTGTCTCCAACATGGCGAACGTAG...AAGGAACATTTCACTGAAGCAGACACAGGAGAGAGGATGTTCTGTAAAACAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR CAA 72 bp | CCTGTATCCACTTTAAGGAAACACTCCTTCATGTGTTaGCCCCAGCACAACACCATCCAACCGACTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: PVSTLRKHSFMC*PQHNTIQPTFQ Trigger: TTGGAAAGTCGGTTGGATGGTGTTGTGCTGGGGCAAACACATGAAGGAGTGTTTCCTTAAAGTGGATACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | GCTTGTTTTACAGAACATCCTCTCTCCTGTGTCTGCTTCAGTGAAATGTTCCTTAAAAGCCACCACAGCTaGAATGATGGCCAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ACFTEHPLSCVCFSEMFLKSHHS*NDGQAP Trigger: TGGAGCTTGGCCATCATTGCAGCTGTGGTGGCTTTT...AAGGAACATTTCACTGAAGCAGACACAGGAGAGAGGATGTTCTGTAAAACAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR GCA 90 bp | CACGCATCGCATCCTTTCACATGCTTGTTTTACAGAACATCCTCTCTCCTGTGTGGAAAATCTGCTCATTaGCCTTGGCTTTCTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: HASHPFTCLFYRTSSLLCGKSAH*PWLSVF Trigger: AAACACAGAAAGCCAAGGGCAATGAGCAGATTTTCC...ACACAGGAGAGAGGATGTTCTGTAAAACAAGCATGTGAAAGGATGCGATGCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR CAA 72 bp | AGAATCCTTCATCACGCATCGCATCCTTTCACATGCTaGTTTTACAGAACATCCTCTCTCCTGTGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RILHHASHPFTC*FYRTSSLLCLL Trigger: AAGCAGACACAGGAGAGAGGATGTTCTGTAAAACAAGCATGTGAAAGGATGCGATGCGTGATGAAGGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| 3UTR CAA 72 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTaGCAGATCCATAATTGTGTCTTTAGCAAAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: YWLVHNVVPPIG*QIHNCVFSKES Trigger: GGATTCTTTGCTAAAGACACAATTATGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR CAA 90 bp | CTGCAGACCCGGAAGGTTGGCGGTGGAAGGGAACACAGGGCAATGCAGAGACAGATGTCACATGTGCCTTaGGAGGATCTGTGCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LQTRKVGGGREHRAMQRQMSHVP*EDLCAA Trigger: TGCTGCGCACAGATCCTCCAAAGGCACATGTGACAT...CTGTCTCTGCATTGCCCTGTGTTCCCTTCCACCGCCAACCTTCCGGGTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS-3UTR CAA 90 bp | TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCATAATTGTCGGAAAATCTGCTCATaGCCCTTGGCTTTCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: YWLVHNVVPPIGLQIHNCRKICS*PLAFCV Trigger: AACACAGAAAGCCAAGGGCAATGAGCAGATTTTCCG...ACAATTATGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS CAA 90 bp | GATGGCCAAGCTCCAAGGACAACCAGAACAGCTACGTTCGCCATGTaGGAGACAGTGGATGGAGGAGGCTCCCATCTCAGGGTGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: DGQAPRTTRTATFAM*ETVDGGGSHLRVRG Trigger: GCCCCTCACCCTGAGATGGGAGCCTCCTCCATCCACTGTCTCCAACATGGCGAACGTAGCTGTTCTGGTTGTCCTTGGAGCTTGGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS CCA 72 bp | ACCGTCAGATCTGTGGTGACATGTCACATGTGCCTTTaGAGGATCTGTGCGCAGCAGCGTCTCCTTCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: TVRSVVTCHMCL*RICAQQRLLPE Trigger: CTCGGGAAGGAGACGCTGCTGCGCACAGATCCTCCAAAGGCACATGTGACATGTCACCACAGATCTGACGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS CAA 72 bp | CACCGTCAGATCTGTGGTGACATGTCACATGTGCCTTaGGAGGATCTGTGCGCAGCAGCGTCTCCTTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: HRQICGDMSHVP*EDLCAAASPSR Trigger: TCGGGAAGGAGACGCTGCTGCGCACAGATCCTCCAAAGGCACATGTGACATGTCACCACAGATCTGACGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS CAA 72 bp | GCTCCAAGGACAACCAGAACAGCTACGTTCGCCATGTaGGAGACAGTGGATGGAGGAGGCTCCCATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: APRTTRTATFAM*ETVDGGGSHLR Trigger: CCTGAGATGGGAGCCTCCTCCATCCACTGTCTCCAACATGGCGAACGTAGCTGTTCTGGTTGTCCTTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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| CDS GCA 72 bp | GACATCACCGTCAGATCTGTGGTGACATGTCACATGTaGCTTTGGAGGATCTGTGCGCAGCAGCGTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: DITVRSVVTCHM*LWRICAQQRLL Trigger: AAGGAGACGCTGCTGCGCACAGATCCTCCAAAGGCACATGTGACATGTCACCACAGATCTGACGGTGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081435.5 |
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