Pregenerated sensors for H2-OB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041538Ensembl transcript IDs: ENSMUST00000095342.11, ENSMUST00000167280.8, ENSMUST00000236838.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAGGCAACAACATCTCAGCGTGGGAACCCTTCACCTTGGAGGCTaGGCCTTCTCAACAGCTTTAATCCTATCAGAAAGAAAAGATGAC | + |
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Preference number: 1 (lower is better) Translates to: CRQQHLSVGTLHLGG*AFSTALILSERKDD Trigger: GTCATCTTTTCTTTCTGATAGGATTAAAGCTGTTGAGAAGGCTCAGCCTCCAAGGTGAAGGGTTCCCACGCTGAGATGTTGTTGCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR GCA 90 bp | TCTGGGAGACAAGAAAGACCATGGATTCTTGTATACATAAGTGTATaGTTGGCTGTATCTAATCACCCCACGTGGATAGTGTGTGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: SGRQERPWILVYISV*LAVSNHPTWIVCAV Trigger: CACAGCACACACTATCCACGTGGGGTGATTAGATACAGCCAAGCATACACTTATGTATACAAGAATCCATGGTCTTTCTTGTCTCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR CCA 90 bp | ATAAGGATTTTTAAGGTGACTGTATGGAAGACTAGAAGCTGTGGTTaGAAGATAGAAATCTTGGGGCTCCACAGTCACAGGGTTAGGATT | + |
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Preference number: 1 (lower is better) Translates to: IRIFKVTVWKTRSCG*KIEILGLHSHRVRI Trigger: AATCCTAACCCTGTGACTGTGGAGCCCCAAGATTTCTATCTTCCAACCACAGCTTCTAGTCTTCCATACAGTCACCTTAAAAATCCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR TCA 90 bp | AGGCTGAGCCTTCTCAACAGCTTTAATCCTATCAGAAAGAAAAGATaGCGTAAAACATCTGAAAGTCTGGGAGACAAGAAAGACCATGGA | + |
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Preference number: 1 (lower is better) Translates to: RLSLLNSFNPIRKKR*RKTSESLGDKKDHG Trigger: TCCATGGTCTTTCTTGTCTCCCAGACTTTCAGATGTTTTACGTCATCTTTTCTTTCTGATAGGATTAAAGCTGTTGAGAAGGCTCAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR GCA 90 bp | CTTGAACAAGTCATTGATTTATACTTCACTGCGGTTGCCTGTGACTaGTTTATTTTTACAATAAGGATTTTTAAGGTGACTGTATGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LEQVIDLYFTAVACD*FIFTIRIFKVTVWK Trigger: CTTCCATACAGTCACCTTAAAAATCCTTATTGTAAAAATAAAGCAGTCACAGGCAACCGCAGTGAAGTATAAATCAATGACTTGTTCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR CAA 90 bp | GGAAGGTCCATGACCACATCTCACAGACTGAAGAGCCAGCATCCTTaGCCAACCCGAATCCTCAGCCCTGTCACACTTCTTCAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GRSMTTSHRLKSQHP*PTRILSPVTLLQAL Trigger: CAGAGCCTGAAGAAGTGTGACAGGGCTGAGGATTCGGGTTGGCAAAGGATGCTGGCTCTTCAGTCTGTGAGATGTGGTCATGGACCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCAGTCACTCAAAATGGAGACAGAAATaGAGCCCTGGACAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: KQMLPVRKRKAVSHRSHSKWRQK*SPGQLW Trigger: CCACAGCTGTCCAGGGCTTCATTTCTGTCTCCATTT...TGAGTGACTGCGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| 3UTR CAA 90 bp | GTGACTGTATGGAAGACTAGAAGCTGTGGTTGGAAGATAGAAATCTaGGGGCTCCACAGTCACAGGGTTAGGATTGGGCCAAAGCAACTT | + |
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Preference number: 2 (lower is better) Translates to: VTVWKTRSCGWKIEI*GLHSHRVRIGPKQL Trigger: AAGTTGCTTTGGCCCAATCCTAACCCTGTGACTGTGGAGCCCCAAGATTTCTATCTTCCAACCACAGCTTCTAGTCTTCCATACAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAACAATCAGACTAGAGTCTCACCCCAAGTCTGCATCAGATGCTAACTCACCACATCTCACAGACTaGAGAGCCAGCATCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SKTIRLESHPKSASDANSPHLTD*RASILC Trigger: GCAAAGGATGCTGGCTCTTCAGTCTGTGAGATGTGG...TGAGTTAGCATCTGATGCAGACTTGGGGTGAGACTCTAGTCTGATTGTTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAAGGAAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGAATAGCATGCTTCTGTaGCACAGGAGATTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HKKEANATSEKEEGGQPSNSMLL*HRRFPS Trigger: AGAAGGAAATCTCCTGTGTCACAGAAGCATGCTATT...CGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTTCCTTCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| 3UTR CAA 90 bp | GGGAGACAAGAAAGACCATGGATTCTTGTATACATAAGTGTATGCTaGGCTGTATCTAATCACCCCACGTGGATAGTGTGTGCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GRQERPWILVYISVC*AVSNHPTWIVCAVG Trigger: ACCCACAGCACACACTATCCACGTGGGGTGATTAGATACAGCCAAGCATACACTTATGTATACAAGAATCCATGGTCTTTCTTGTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR CAA 90 bp | GAATGCATTGCTCCACTAAGGTCACTATTAAGTGAAATTAGTGCTTaGTTTCAGAATCCTGCAGCACTGGACACAACGGTAGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: ECIAPLRSLLSEISA*FQNPAALDTTVAPC Trigger: GCAGGGTGCTACCGTTGTGTCCAGTGCTGCAGGATTCTGAAACAAAGCACTAATTTCACTTAATAGTGACCTTAGTGGAGCAATGCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGAGGGAAACTCCATGTTCTTCAAGAATGTGCTCCTAAGGGCAGATGGAGAATGGGGGTGGATTTaGTCAAAACACATAATACTC | + |
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Preference number: 2 (lower is better) Translates to: EAEGNSMFFKNVLLRADGEWGWI*SKHIIL Trigger: GAGTATTATGTGTTTTGATCAAATCCACCCCCATTC...TCCATCTGCCCTTAGGAGCACATTCTTGAAGAACATGGAGTTTCCCTCTGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCAGTCACTCAGATTTTCAAATTAATTaGGAGAAGAACGGGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: KQMLPVRKRKAVSHRSHSDFQIN*EKNGMV Trigger: GACCATCCCGTTCTTCTCTCAATTAATTTGAAAATC...TGAGTGACTGCGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAACGCGGTTGCCTGTGACTaGTTTATTTTTACAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: RRYTVTPEKVMASSRLQNAVACD*FIFTIR Trigger: CCTTATTGTAAAAATAAAGCAGTCACAGGCAACCGC...GTTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAACAATCAGACTAGAGTCTCACCCCAAGTCTGCATCAGATGCTAACTCAGCTGTGGGTGTTTATTaGCTGAGGCACATAAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SKTIRLESHPKSASDANSAVGVY*LRHIRN Trigger: ATTCCTTATGTGCCTCAGCCAATAAACACCCACAGC...TGAGTTAGCATCTGATGCAGACTTGGGGTGAGACTCTAGTCTGATTGTTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTAGAACGCTTCTAAATGTCCAAGATCAAGCATTCCACACTCCCAGCATGAGACTCACTTTAAGATaGCAACAGTTTTACCACCAT | + |
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Preference number: 2 (lower is better) Translates to: SVRTLLNVQDQAFHTPSMRLTLR*QQFYHH Trigger: ATGGTGGTAAAACTGTTGGCATCTTAAAGTGAGTCT...CATGCTGGGAGTGTGGAATGCTTGATCTTGGACATTTAGAAGCGTTCTAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| 3UTR-3UTR TCA 90 bp | CATACAGCAGAAACACTCCCAACTGTCAACTTATTAAAAAGATGTTACTCAGGTCCACTGTTTGTGTTTTaGCCTGAGCAAGTGATGACA | + |
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Preference number: 2 (lower is better) Translates to: HTAETLPTVNLLKRCYSGPLFVF*PEQVMT Trigger: TGTCATCACTTGCTCAGGTCAAAACACAAACAGTGG...ACCTGAGTAACATCTTTTTAATAAGTTGACAGTTGGGAGTGTTTCTGCTGTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR GCA 90 bp | ACACTCCCAACTGTCAACTTATTAAAAAGATGTTACTCAGGTGTCAAGACTTTGTTTGTTTCAGAATCCTaGAGCACTGGACACAACGGT | + |
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Preference number: 2 (lower is better) Translates to: TLPTVNLLKRCYSGVKTLFVSES*STGHNG Trigger: ACCGTTGTGTCCAGTGCTGCAGGATTCTGAAACAAA...CAAAGTCTTGACACCTGAGTAACATCTTTTTAATAAGTTGACAGTTGGGAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| 3UTR-3UTR TCA 90 bp | ACATACAGCAGAAACACTCCCAACTGTCAACTTATTAAAAAGATGTTACTCAGGCACTGCGGTTGCCTGTaGCTGCTTTATTTTTACAAT | + |
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Preference number: 2 (lower is better) Translates to: TYSRNTPNCQLIKKMLLRHCGCL*LLYFYN Trigger: ATTGTAAAAATAAAGCAGTCACAGGCAACCGCAGTG...CCTGAGTAACATCTTTTTAATAAGTTGACAGTTGGGAGTGTTTCTGCTGTATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGACCATTCAAGACAAAATAGTATCCCTTCAGACAATGAAAATACACCAGAAACATCTGAAAGTCTaGGAGACAAGAAAGACCATG | + |
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Preference number: 2 (lower is better) Translates to: VETIQDKIVSLQTMKIHQKHLKV*ETRKTM Trigger: CATGGTCTTTCTTGTCTCCCAGACTTTCAGATGTTT...CTGGTGTATTTTCATTGTCTGAAGGGATACTATTTTGTCTTGAATGGTCTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR CCA 72 bp | CACCCCACGTGGATAGTGTGTGCTGTGGGTGTTTATTaGCTGAGGCACATAAGGAATTCCACAGAGACCACC | + |
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Preference number: 3 (lower is better) Translates to: HPTWIVCAVGVY*LRHIRNSTETT Trigger: GGTGGTCTCTGTGGAATTCCTTATGTGCCTCAGCCAATAAACACCCACAGCACACACTATCCACGTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR CCA 72 bp | GATGGCACCATGTATGTAGGCAACAACATCTCAGCGTaGGAACCCTTCACCTTGGAGGCTGAGCCTTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: DGTMYVGNNISA*EPFTLEAEPSQ Trigger: TTGAGAAGGCTCAGCCTCCAAGGTGAAGGGTTCCCACGCTGAGATGTTGTTGCCTACATACATGGTGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| 3UTR CCA 72 bp | GCAGCCAGTGTGTCAGATGGCACCACGTGTATCAGATaGCACCATGTATGTAGGCAACAACATCTCAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: AASVSDGTTCIR*HHVCRQQHLSV Trigger: CACGCTGAGATGTTGTTGCCTACATACATGGTGCCATCTGATACACGTGGTGCCATCTGACACACTGGCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCATTCCACACTCCCAGCATGGGTAGGTGGGATTTGTGAAGTGTCAACCTTAGTCACAGGGTTAGGATaGGGCCAAAGCAACTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: KHSTLPAWVGGICEVSTLVTGLG*GQSNLG Trigger: ACCCAAGTTGCTTTGGCCCAATCCTAACCCTGTGAC...TAAGGTTGACACTTCACAAATCCCACCTACCCATGCTGGGAGTGTGGAATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGGCACATAAGGAATTCCACAGAGACCACCACTGTTTGTGTTTTGACCTGTGGAAGATAGAAATCTaGGGGCTCCACAGTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: AEAHKEFHRDHHCLCFDLWKIEI*GLHSHR Trigger: CCTGTGACTGTGGAGCCCCAAGATTTCTATCTTCCA...CAGGTCAAAACACAAACAGTGGTGGTCTCTGTGGAATTCCTTATGTGCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAAGGAAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGGGAGGTGCAGGAATATaGAGATATGGCTACAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: HKKEANATSEKEEGGQPSGGAGI*RYGYSS Trigger: GCTACTGTAGCCATATCTCAATATTCCTGCACCTCC...CGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTTCCTTCTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| 3UTR CCA 72 bp | ATAAGTGTATGCTTGGCTGTATCTAATCACCCCACGTaGATAGTGTGTGCTGTGGGTGTTTATTGGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: ISVCLAVSNHPT*IVCAVGVYWLR Trigger: CCTCAGCCAATAAACACCCACAGCACACACTATCCACGTGGGGTGATTAGATACAGCCAAGCATACACTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCATTCCACACTCCCAGCATGGGTAGGTGGGATTTGTGAAGTGTCAACCTTAGCCTTGAACAAGTCATaGATTTATACTTCACTGCGG | + |
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Preference number: 3 (lower is better) Translates to: KHSTLPAWVGGICEVSTLALNKS*IYTSLR Trigger: CCGCAGTGAAGTATAAATCAATGACTTGTTCAAGGC...TAAGGTTGACACTTCACAAATCCCACCTACCCATGCTGGGAGTGTGGAATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR TCA 72 bp | AATTCCACAGAGACCACCACTGTTTGTGTTTTGACCTaGGCAAGTGATGACACGGGTTTTGCCTTGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: NSTETTTVCVLT*ASDDTGFALNK Trigger: CTTGTTCAAGGCAAAACCCGTGTCATCACTTGCTCAGGTCAAAACACAAACAGTGGTGGTCTCTGTGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR TCA 72 bp | TCAGACACCAGGTGGCTAAGATGGGTTACAACACTTTaGTGCCAACAACTAAACAGGAAATGGAGACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SDTRWLRWVTTL*CQQLNRKWRQK Trigger: TTTCTGTCTCCATTTCCTGTTTAGTTGTTGGCATCAAAGTGTTGTAACCCATCTTAGCCACCTGGTGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| 3UTR GCA 72 bp | CAAGAAAGACCATGGATTCTTGTATACATAAGTGTATaGTTGGCTGTATCTAATCACCCCACGTGGATAGTG | + |
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Preference number: 3 (lower is better) Translates to: QERPWILVYISV*LAVSNHPTWIV Trigger: CACTATCCACGTGGGGTGATTAGATACAGCCAAGCATACACTTATGTATACAAGAATCCATGGTCTTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR GCA 72 bp | GTCATTGATTTATACTTCACTGCGGTTGCCTGTGACTaGTTTATTTTTACAATAAGGATTTTTAAGGTGACT | + |
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Preference number: 3 (lower is better) Translates to: VIDLYFTAVACD*FIFTIRIFKVT Trigger: AGTCACCTTAAAAATCCTTATTGTAAAAATAAAGCAGTCACAGGCAACCGCAGTGAAGTATAAATCAATGAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR TCA 90 bp | TCTTGGGGCTCCACAGTCACAGGGTTAGGATTGGGCCAAAGCAACTTGGGTGTGCAAGGCCAGTGGACATaGCCCCAGACCTCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SWGSTVTGLGLGQSNLGVQGQWT*PQTSPP Trigger: AGGAGGAGAGGTCTGGGGTCATGTCCACTGGCCTTG...CACACCCAAGTTGCTTTGGCCCAATCCTAACCCTGTGACTGTGGAGCCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR GCA 90 bp | GACAGAAACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGTGTTCACAGCAGCTCTaGTCGTCTCCAGGAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: DRNRDRARETETERGRCRCSQQL*SSPGDP Trigger: TGGATCTCCTGGAGACGAGCAGAGCTGCTGTGAACA...CCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGTTTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGAATATTGAGCAGGTTGTGCTGCTaGAGCAACGGGGTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TETEPERRRQREGGAGILSRLCC*SNGVLS Trigger: AGAGAGGACCCCGTTGCTGCAGCAGCACAACCTGCT...CAATATTCCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR TCA 90 bp | CATAAGAAGGAAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCAAGGCCAGTGGACATaGCCCCAGACCTCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HKKEANATSEKEEGGQPSQGQWT*PQTSPP Trigger: AGGAGGAGAGGTCTGGGGTCATGTCCACTGGCCTTG...CGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTTCCTTCTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | GACAGAAACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGCCCAGCTTGTACTTCTaGCTGCAGACCATGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: DRNRDRARETETERGRCRPSLYF*LQTMFT Trigger: TGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGG...CCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGTTTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGGGAAACTCCATGTTCTTCAAGAATGTGCTCCTAAGGGCAGATGGACCTCAGAGCAGCAGGTTGTaGTGCTGCAGCAACGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AEGNSMFFKNVLLRADGPQSSRL*CCSNGV Trigger: GACCCCGTTGCTGCAGCAGCACAACCTGCTGCTCTG...AGGTCCATCTGCCCTTAGGAGCACATTCTTGAAGAACATGGAGTTTCCCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR GCA 90 bp | GATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGGCTACCAGAGCAGCAGGTTGTaGTGCTGCAGCAACGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: DFLLRQQDLYEFQDSQGYQSSRL*CCSNGV Trigger: GACCCCGTTGCTGCAGCAGCACAACCTGCTGCTCTG...GTAGCCCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGAATATTGCAACGGGGTCCTCTCTaGATACACTGTCACCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TETEPERRRQREGGAGILQRGPL*IHCHLW Trigger: CCAGAGGTGACAGTGTATCCAGAGAGGACCCCGTTG...CAATATTCCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCAGACTCCAAAACAATCAGACTAGAGTCTCACCCCAAGTCTGCATCAGACAAGGCCAGTGGACATaGCCCCAGACCTCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SSRLQNNQTRVSPQVCIRQGQWT*PQTSPP Trigger: AGGAGGAGAGGTCTGGGGTCATGTCCACTGGCCTTG...TCTGATGCAGACTTGGGGTGAGACTCTAGTCTGATTGTTTTGGAGTCTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGAATATTGTCCTCATTGCCAGGCTaGGTCTCCACAGATGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TETEPERRRQREGGAGILSSLPG*VSTDAF Trigger: GAAAGCATCTGTGGAGACTCAGCCTGGCAATGAGGA...CAATATTCCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGGAGGAGTTGACGGCTGAGGCAGAGGGAAACTCCATGTTCTTCAAGAATCTCTTGAGGCCTCATTaGCAGGCTGAGTCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AEEELTAEAEGNSMFFKNLLRPH*QAESPQ Trigger: CTGTGGAGACTCAGCCTGGCAATGAGGCCTCAAGAG...ATTCTTGAAGAACATGGAGTTTCCCTCTGCCTCAGCCGTCAACTCCTCCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR CCA 90 bp | CCACGTGTATCAGATGGCACCATGTATGTAGGCAACAACATCTCAGCGTGGGAAAGGCGTTTGTTCCACTaGTCAGCATCAGGTTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: PRVSDGTMYVGNNISAWERRLFH*SASGSP Trigger: GGGGGAACCTGATGCTGACCAGTGGAACAAACGCCT...TTCCCACGCTGAGATGTTGTTGCCTACATACATGGTGCCATCTGATACACGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR CCA 90 bp | GACAGAAACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGGATGTCACCAAGCTCTaGGATCATTTCCAGCATTAC | + |
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Preference number: 4 (lower is better) Translates to: DRNRDRARETETERGRCRDVTKL*DHFQHY Trigger: GTAATGCTGGAAATGATCCCAGAGCTTGGTGACATC...CCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGTTTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAGCCTCATTGCCAGGCTaGGTCTCCACAGATGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRYTVTPEKVMASSRLQASLPG*VSTDAF Trigger: GAAAGCATCTGTGGAGACTCAGCCTGGCAATGAGGC...TTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | CACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAACAATCAGACGCCTCATTGCCAGGCTaGGTCTCCACAGATGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HCNSRKGHGLLQTPKQSDASLPG*VSTDAF Trigger: GAAAGCATCTGTGGAGACTCAGCCTGGCAATGAGGC...GTCTGATTGTTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | AACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAATGGAGACTCTCTCTTaGGGCCTCATTGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKEIHCNSRKGHGLLQTPMETLS*GLIARL Trigger: CAGCCTGGCAATGAGGCCTCAAGAGAGAGTCTCCAT...TGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR GCA 90 bp | ACACAAAGGGTAAAAGAGTGTGTCAGATGGCAGCCAGTGTGTCAGATGGCACCATGTTCACAGCAGCTCTaGTCGTCTCCAGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQRVKECVRWQPVCQMAPCSQQL*SSPGDP Trigger: TGGATCTCCTGGAGACGAGCAGAGCTGCTGTGAACA...TGGTGCCATCTGACACACTGGCTGCCATCTGACACACTCTTTTACCCTTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR GCA 90 bp | GGTTGGAAGATAGAAATCTTGGGGCTCCACAGTCACAGGGTTAGGATTGGGCCACCCAAGCAGGAACACTaGAGCTCCACTCAGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GWKIEILGLHSHRVRIGPPKQEH*SSTQYL Trigger: AAGATACTGAGTGGAGCTGCAGTGTTCCTGCTTGGG...TGGCCCAATCCTAACCCTGTGACTGTGGAGCCCCAAGATTTCTATCTTCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| 3UTR CAA 72 bp | ATGACCACATCTCACAGACTGAAGAGCCAGCATCCTTaGCCAACCCGAATCCTCAGCCCTGTCACACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MTTSHRLKSQHP*PTRILSPVTLL Trigger: AAGAAGTGTGACAGGGCTGAGGATTCGGGTTGGCAAAGGATGCTGGCTCTTCAGTCTGTGAGATGTGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
||
| 3UTR CAA 72 bp | GGGATTTGTGAAGTGTCAACCTTAGCTGAGGAGGAGTaGACGGCTGAGGCAGAGGGAAACTCCATGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GICEVSTLAEEE*TAEAEGNSMFF Trigger: GAAGAACATGGAGTTTCCCTCTGCCTCAGCCGTCAACTCCTCCTCAGCTAAGGTTGACACTTCACAAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR TCA 90 bp | CCACGTGTATCAGATGGCACCATGTATGTAGGCAACAACATCTCAGCGTGGGAACAGTCCGCCTTTGCCTaGATCACAAAATTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVSDGTMYVGNNISAWEQSAFA*ITKFSG Trigger: CCCAGAGAATTTTGTGATTCAGGCAAAGGCGGACTG...TTCCCACGCTGAGATGTTGTTGCCTACATACATGGTGCCATCTGATACACGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGAAGGAAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCAGTCCGCCTTTGCCTaGATCACAAAATTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HKKEANATSEKEEGGQPSQSAFA*ITKFSG Trigger: CCCAGAGAATTTTGTGATTCAGGCAAAGGCGGACTG...CGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTTCCTTCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
||
| CDS-3UTR GCA 90 bp | CCACGTGTATCAGATGGCACCATGTATGTAGGCAACAACATCTCAGCGTGGGAAGCTTGTACTTCTGCCTaGAGACCATGTTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRVSDGTMYVGNNISAWEACTSA*RPCSQQ Trigger: CTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGC...TTCCCACGCTGAGATGTTGTTGCCTACATACATGGTGCCATCTGATACACGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR GCA 90 bp | CATAAGAAGGAAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCCCAAGCAGGAACACTaGAGCTCCACTCAGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKKEANATSEKEEGGQPSPKQEH*SSTQYL Trigger: AAGATACTGAGTGGAGCTGCAGTGTTCCTGCTTGGG...CGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTTCCTTCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCCTCCAGACTCCAAAACAATCAGACTAGAGTCTCACCCCAAGTCTGCACTGAGTCTCCACAGATaGTTTCTGAGCCTTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WPPPDSKTIRLESHPKSALSLHR*FLSLEM Trigger: CATCTCAAGGCTCAGAAAGCATCTGTGGAGACTCAG...TGCAGACTTGGGGTGAGACTCTAGTCTGATTGTTTTGGAGTCTGGAGGAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGTATGTAGGCAACAACATCTCAGCGTGGGAACCCTTCACCTTGGAGGCTCTGAGTCTCCACAGATaGTTTCTGAGCCTTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TMYVGNNISAWEPFTLEALSLHR*FLSLEM Trigger: CATCTCAAGGCTCAGAAAGCATCTGTGGAGACTCAG...AGCCTCCAAGGTGAAGGGTTCCCACGCTGAGATGTTGTTGCCTACATACATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAAACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGAATCACAAAATTCTCTaGGGAGTCTCTGCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DRNRDRARETETERGRCRNHKIL*GVSAFN Trigger: ATTGAAGGCAGAGACTCCCCAGAGAATTTTGTGATT...CCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGTTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CCA 90 bp | AAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAAAGGCGTTTGTTCCACTaGTCAGCATCAGGTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEIHCNSRKGHGLLQTPKRRLFH*SASGSP Trigger: GGGGGAACCTGATGCTGACCAGTGGAACAAACGCCT...TTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAACAATCAGCAACGGGGTCCTCTCTaGATACACTGTCACCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVTPEKVMASSRLQNNQQRGPL*IHCHLW Trigger: CCAGAGGTGACAGTGTATCCAGAGAGGACCCCGTTG...CTGATTGTTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR TCA 90 bp | TCCTCCAGACTCCAAAACAATCAGACTAGAGTCTCACCCCAAGTCTGCATCAGACAGTCCGCCTTTGCCTaGATCACAAAATTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLQNNQTRVSPQVCIRQSAFA*ITKFSG Trigger: CCCAGAGAATTTTGTGATTCAGGCAAAGGCGGACTG...TCTGATGCAGACTTGGGGTGAGACTCTAGTCTGATTGTTTTGGAGTCTGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCAGTCACTCATCCACAGATGCTTTCTaGGCCTTGAGATGGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: KQMLPVRKRKAVSHRSHSSTDAF*ALRWIT Trigger: TGTTATCCATCTCAAGGCTCAGAAAGCATCTGTGGA...TGAGTGACTGCGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCACATAAGGAATTCCACAGAGACCACCACTGTTTGTGTTTTGACCTGGCTTGTACTTCTGCCTaGAGACCATGTTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEAHKEFHRDHHCLCFDLACTSA*RPCSQQ Trigger: CTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGC...CAGGTCAAAACACAAACAGTGGTGGTCTCTGTGGAATTCCTTATGTGCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
||
| CDS-3UTR GCA 90 bp | GGTTTTGCCTTGAACAAGTCATTGATTTATACTTCACTGCGGTTGCCTGTGACTAGCAGGTTGTGCTGCTaGAGCAACGGGGTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFALNKSLIYTSLRLPVTSRLCC*SNGVLS Trigger: AGAGAGGACCCCGTTGCTGCAGCAGCACAACCTGCT...AGTCACAGGCAACCGCAGTGAAGTATAAATCAATGACTTGTTCAAGGCAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR GCA 90 bp | GATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGGCTACCTGAGTCTCCACAGATaGTTTCTGAGCCTTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DFLLRQQDLYEFQDSQGYLSLHR*FLSLEM Trigger: CATCTCAAGGCTCAGAAAGCATCTGTGGAGACTCAG...GTAGCCCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | GACAGAAACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGTTGTGGTCATTTCTATaGCAAAGATCATCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DRNRDRARETETERGRCRLWSFL*QRSSSP Trigger: TGGTGAAGATGATCTTTGGCATAGAAATGACCACAA...CCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGTTTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CCA 90 bp | ACACAAAGGGTAAAAGAGTGTGTCAGATGGCAGCCAGTGTGTCAGATGGCACCAATACACTGTCACCTCTaGAGGCACATTTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQRVKECVRWQPVCQMAPIHCHL*RHISLH Trigger: GTGGAGAGAAATGTGCCTCCAGAGGTGACAGTGTAT...TGGTGCCATCTGACACACTGGCTGCCATCTGACACACTCTTTTACCCTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR CCA 90 bp | CATAAGAAGGAAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGATACACTGTCACCTCTaGAGGCACATTTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKKEANATSEKEEGGQPSIHCHL*RHISLH Trigger: GTGGAGAGAAATGTGCCTCCAGAGGTGACAGTGTAT...CGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTTCCTTCTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAGGGAAACTCCATGTTCTTCAAGAATGTGCTCCTAAGGGCAGATGGAAACCTGACCAGCAAGTaGACCTTTTCTGTACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EAEGNSMFFKNVLLRADGNLTSK*TFSVPL Trigger: CAATGGTACAGAAAAGGTTCACTTGCTGGTCAGGTT...TCCATCTGCCCTTAGGAGCACATTCTTGAAGAACATGGAGTTTCCCTCTGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | GATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGGCTACAACCTGACCAGCAAGTaGACCTTTTCTGTACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DFLLRQQDLYEFQDSQGYNLTSK*TFSVPL Trigger: CAATGGTACAGAAAAGGTTCACTTGCTGGTCAGGTT...GTAGCCCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR TCA 90 bp | GGTTTTGCCTTGAACAAGTCATTGATTTATACTTCACTGCGGTTGCCTGTGACTATGGAGACTCTCTCTTaGGGCCTCATTGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFALNKSLIYTSLRLPVTMETLS*GLIARL Trigger: CAGCCTGGCAATGAGGCCTCAAGAGAGAGTCTCCAT...AGTCACAGGCAACCGCAGTGAAGTATAAATCAATGACTTGTTCAAGGCAAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR TCA 90 bp | CAGGAGATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGAAGCATCTTGCAGATTaGCTGACTGGTGAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEISFLDSRISMSSRTARKHLAD*LTGEYF Trigger: GAAGTACTCACCAGTCAGTCAATCTGCAAGATGCTT...CCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAATCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR GCA 90 bp | TACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAACAATCAGCCCAGCTTGTACTTCTaGCTGCAGACCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YTVTPEKVMASSRLQNNQPSLYF*LQTMFT Trigger: TGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGG...CTGATTGTTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR GCA 90 bp | AAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAACCCAAGCAGGAACACTaGAGCTCCACTCAGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEIHCNSRKGHGLLQTPKPKQEH*SSTQYL Trigger: AAGATACTGAGTGGAGCTGCAGTGTTCCTGCTTGGG...TTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR CCA 90 bp | CCACGTGTATCAGATGGCACCATGTATGTAGGCAACAACATCTCAGCGTGGGAAAGCATTACTGTTGTCTaGAAGGTCCAGTCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSDGTMYVGNNISAWESITVV*KVQSPF Trigger: GAATGGAGACTGGACCTTCCAGACAACAGTAATGCT...TTCCCACGCTGAGATGTTGTTGCCTACATACATGGTGCCATCTGATACACGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGAGCATTACTGTTGTCTaGAAGGTCCAGTCTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QEISFLDSRISMSSRTARSITVV*KVQSPF Trigger: GAATGGAGACTGGACCTTCCAGACAACAGTAATGCT...CCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAATCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CCA 90 bp | ACACAAAGGGTAAAAGAGTGTGTCAGATGGCAGCCAGTGTGTCAGATGGCACCAGATGTCACCAAGCTCTaGGATCATTTCCAGCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: TQRVKECVRWQPVCQMAPDVTKL*DHFQHY Trigger: GTAATGCTGGAAATGATCCCAGAGCTTGGTGACATC...TGGTGCCATCTGACACACTGGCTGCCATCTGACACACTCTTTTACCCTTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | CAGGAGATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGTCTGTGGTTGTAGATTaGCCTTTCCAGAAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEISFLDSRISMSSRTARSVVVD*PFQKHL Trigger: AAGATGCTTCTGGAAAGGTCAATCTACAACCACAGA...CCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAATCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CCA 90 bp | ATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGGCTACGCTGGTGAGTACTTCATaGTTGTGGTCATTTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISFLDSRISMSSRTARATLVSTS*LWSFLC Trigger: GCATAGAAATGACCACAACCATGAAGTACTCACCAG...CGTAGCCCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAAATTTCTGTACCATTGGTaGAGTAACAGTCCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEIHCNSRKGHGLLQTPKFLYHW*SNSPPL Trigger: CAAAGGCGGACTGTTACTTCACCAATGGTACAGAAA...TTTTGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR GCA 90 bp | CATCATGAAAGGAAAAACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCTGTTCACAGCAGCTCTaGTCGTCTCCAGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHERKNKEIHCNSRKGHGCSQQL*SSPGDP Trigger: TGGATCTCCTGGAGACGAGCAGAGCTGCTGTGAACA...GCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGTTTTTCCTTTCATGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR GCA 90 bp | GCCAACAGTTTTACCACCATTAGCTTTGAACTTCTACTGCAGCTAACATTGAGCCCCAGCTTGTACTTCTaGCTGCAGACCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ANSFTTISFELLLQLTLSPSLYF*LQTMFT Trigger: TGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGG...GCTCAATGTTAGCTGCAGTAGAAGTTCAAAGCTAATGGTGGTAAAACTGTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAAACAATCAGACTAGAGTCTCACCCCAAGTCTGCATCAGATGCTAACTCAAACCTGACCAGCAAGTaGACCTTTTCTGTACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKTIRLESHPKSASDANSNLTSK*TFSVPL Trigger: CAATGGTACAGAAAAGGTTCACTTGCTGGTCAGGTT...TGAGTTAGCATCTGATGCAGACTTGGGGTGAGACTCTAGTCTGATTGTTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR GCA 90 bp | CATACAGCAGAAACACTCCCAACTGTCAACTTATTAAAAAGATGTTACTCAGGTCTCTTGAGGCCTCATTaGCAGGCTGAGTCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HTAETLPTVNLLKRCYSGLLRPH*QAESPQ Trigger: CTGTGGAGACTCAGCCTGGCAATGAGGCCTCAAGAG...ACCTGAGTAACATCTTTTTAATAAGTTGACAGTTGGGAGTGTTTCTGCTGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR CCA 90 bp | AACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCCTCCTCCAGACTCCAAATCACAAAATTCTCTaGGGAGTCTCTGCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKEIHCNSRKGHGLLQTPNHKIL*GVSAFN Trigger: ATTGAAGGCAGAGACTCCCCAGAGAATTTTGTGATT...TGGAGTCTGGAGGAGGCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTAGAACGCTTCTAAATGTCCAAGATCAAGCATTCCACACTCCCAGCATGGATGTCACCAAGCTCTaGGATCATTTCCAGCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRTLLNVQDQAFHTPSMDVTKL*DHFQHY Trigger: GTAATGCTGGAAATGATCCCAGAGCTTGGTGACATC...CATGCTGGGAGTGTGGAATGCTTGATCTTGGACATTTAGAAGCGTTCTAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGTGATGACACGGGTTTTGCCTTGAACAAGTCATTGATTTATACTTCACTGTTTCTGTACCATTGGTaGAGTAACAGTCCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASDDTGFALNKSLIYTSLFLYHW*SNSPPL Trigger: CAAAGGCGGACTGTTACTTCACCAATGGTACAGAAA...CAGTGAAGTATAAATCAATGACTTGTTCAAGGCAAAACCCGTGTCATCACTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
||
| CDS-3UTR CCA 90 bp | CATCATGAAAGGAAAAACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCAGCATTACTGTTGTCTaGAAGGTCCAGTCTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: HHERKNKEIHCNSRKGHGSITVV*KVQSPF Trigger: GAATGGAGACTGGACCTTCCAGACAACAGTAATGCT...GCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGTTTTTCCTTTCATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | ACACTCCCAACTGTCAACTTATTAAAAAGATGTTACTCAGGTGTCAAGACTTTGTCCACAGATGCTTTCTaGGCCTTGAGATGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: TLPTVNLLKRCYSGVKTLSTDAF*ALRWIT Trigger: TGTTATCCATCTCAAGGCTCAGAAAGCATCTGTGGA...CAAAGTCTTGACACCTGAGTAACATCTTTTTAATAAGTTGACAGTTGGGAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR CCA 90 bp | CATCATGAAAGGAAAAACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCAATCACAAAATTCTCTaGGGAGTCTCTGCCTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: HHERKNKEIHCNSRKGHGNHKIL*GVSAFN Trigger: ATTGAAGGCAGAGACTCCCCAGAGAATTTTGTGATT...GCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGTTTTTCCTTTCATGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR TCA 90 bp | AGTGAATGCATTGCTCCACTAAGGTCACTATTAAGTGAAATTAGTGCTTTGTTTTCCACAGATGCTTTCTaGGCCTTGAGATGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: SECIAPLRSLLSEISALFSTDAF*ALRWIT Trigger: TGTTATCCATCTCAAGGCTCAGAAAGCATCTGTGGA...AAACAAAGCACTAATTTCACTTAATAGTGACCTTAGTGGAGCAATGCATTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS GCA 90 bp | GGCACATTTCTCTCCACAGTGAAGGGGGCCCCCAGCTTGTACTTCTaGCTGCAGACCATGTTCACAGCAGCTCTGCTCGTCTCCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GTFLSTVKGAPSLYF*LQTMFTAALLVSRR Trigger: TCTCCTGGAGACGAGCAGAGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000236838.2 |
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| CDS GCA 90 bp | CCCCCAGCTTGTACTTCTGCCTGCAGACCATGTTCACAGCAGCTCTaGTCGTCTCCAGGAGATCCAGGCGTTTGTTCCACTGGTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PPACTSACRPCSQQL*SSPGDPGVCSTGQH Trigger: ATGCTGACCAGTGGAACAAACGCCTGGATCTCCTGGAGACGAGCAGAGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS GCA 90 bp | AAGCCATTTCTCTCCACAGTGAAGGGGGCCCCCAGCTTGTACTTCTaGCTGCAGACCATGTTCACAGCAGCTCTGCTCGTCTCCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: KPFLSTVKGAPSLYF*LQTMFTAALLVSRR Trigger: TCTCCTGGAGACGAGCAGAGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167280.8 |
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| CDS-3UTR CAA 90 bp | AAGCAAATGCTACCAGTGAGAAAGAGGAAGGCGGTCAGCCATCGCAGTCACTCAGAGCAGAGCAGCAGGTaGTGCTGCTGCAGCAACGGG | + |
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Preference number: 5 (lower is better) Translates to: KQMLPVRKRKAVSHRSHSEQSSR*CCCSNG Trigger: CCCGTTGCTGCAGCAGCACAACCTGCTGCTCTGCTC...TGAGTGACTGCGATGGCTGACCGCCTTCCTCTTTCTCACTGGTAGCATTTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS TCA 90 bp | TCTCTGGATACACTGTCACCTCTGGAGGCACATTTCTCTCCACAGTaGAGGGGGCCCCCAGCTTGTACTTCTGCCTGCAGACCATGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLDTLSPLEAHFSPQ*RGPPACTSACRPCS Trigger: TGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGTGCCTCCAGAGGTGACAGTGTATCCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000236838.2 |
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| CDS-3UTR CAA 90 bp | CACAACGGTAGCACCCTGCAGGCTAGACTCACTTTAAGATGCCAACAGTTTTACGAGCAGAGCAGCAGGTaGTGCTGCTGCAGCAACGGG | + |
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Preference number: 5 (lower is better) Translates to: HNGSTLQARLTLRCQQFYEQSSR*CCCSNG Trigger: CCCGTTGCTGCAGCAGCACAACCTGCTGCTCTGCTC...GTAAAACTGTTGGCATCTTAAAGTGAGTCTAGCCTGCAGGGTGCTACCGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095342.11 |
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| CDS-3UTR CAA 90 bp | ACAGAGACAGAGCCAGAGAGACGGAGACAGAGAGAGGGAGGTGCAGGAATATTGAAATACTCCTCCAGGTaGAAGATGAACCTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: TETEPERRRQREGGAGILKYSSR*KMNLTS Trigger: GCTGGTCAGGTTCATCTTCAACCTGGAGGAGTATTT...CAATATTCCTGCACCTCCCTCTCTCTGTCTCCGTCTCTCTGGCTCTGTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS GCA 90 bp | TTCACCATCTTTAGTCTCCTCATTGCCAGGCTGAGTCTCCACAGATaGTTTCTGAGCCTTGAGATGGATAACAACCCCCACCAGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: FTIFSLLIARLSLHR*FLSLEMDNNPHQED Trigger: GTCTTCCTGGTGGGGGTTGTTATCCATCTCAAGGCTCAGAAAGCATCTGTGGAGACTCAGCCTGGCAATGAGGAGACTAAAGATGGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CAA 90 bp | GAGGCAGAGGGAAACTCCATGTTCTTCAAGAATGTGCTCCTAAGGGCAGATGGAAAATACTCCTCCAGGTaGAAGATGAACCTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: EAEGNSMFFKNVLLRADGKYSSR*KMNLTS Trigger: GCTGGTCAGGTTCATCTTCAACCTGGAGGAGTATTT...TCCATCTGCCCTTAGGAGCACATTCTTGAAGAACATGGAGTTTCCCTCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTCTTAGACAGCAGGATCTCTATGAGTTCCAGGACAGCCAGGGCTACGGTCTGTGGTTGTAGATaGACCTTTCCAGAAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: ISFLDSRISMSSRTARATVCGCR*TFPEAS Trigger: AGATGCTTCTGGAAAGGTCAATCTACAACCACAGAC...CGTAGCCCTGGCTGTCCTGGAACTCATAGAGATCCTGCTGTCTAAGAAGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS-3UTR CAA 90 bp | CATCATGAAAGGAAAAACAAGGAGATACACTGTAACTCCAGAAAAGGTCATGGCAAATACTCCTCCAGGTaGAAGATGAACCTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: HHERKNKEIHCNSRKGHGKYSSR*KMNLTS Trigger: GCTGGTCAGGTTCATCTTCAACCTGGAGGAGTATTT...GCCATGACCTTTTCTGGAGTTACAGTGTATCTCCTTGTTTTTCCTTTCATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS TCA 90 bp | TGTAGATTGACCTTTCCAGAAGCATCTTGCAGATTGACTGACTGGTaGGTACTTCATGGTTGTGGTCATTTCTATGCCAAAGATCATCTT | + |
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Preference number: 5 (lower is better) Translates to: CRLTFPEASCRLTDW*VLHGCGHFYAKDHL Trigger: AAGATGATCTTTGGCATAGAAATGACCACAACCATGAAGTACTCACCAGTCAGTCAATCTGCAAGATGCTTCTGGAAAGGTCAATCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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| CDS GCA 72 bp | CTCTCCACAGTGAAGGGGGCCCCCAGCTTGTACTTCTaGCTGCAGACCATGTTCACAGCAGCTCTGCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: LSTVKGAPSLYF*LQTMFTAALLV Trigger: GACGAGCAGAGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS CAA 72 bp | ACAGCAGCTCTGCTCGTCTCCAGGAGATCCAGGCGTTaGTTCCACTGGTCAGCATCAGGTTCCCCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: TAALLVSRRSRR*FHWSASGSPSS Trigger: GGAGCTGGGGGAACCTGATGCTGACCAGTGGAACAAACGCCTGGATCTCCTGGAGACGAGCAGAGCTGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS CAA 90 bp | ACCATGTTCACAGCAGCTCTGCTCGTCTCCAGGAGATCCAGGCGTTaGTTCCACTGGTCAGCATCAGGTTCCCCCAGCTCCGTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TMFTAALLVSRRSRR*FHWSASGSPSSVRA Trigger: GGCTCTGACGGAGCTGGGGGAACCTGATGCTGACCAGTGGAACAAACGCCTGGATCTCCTGGAGACGAGCAGAGCTGCTGTGAACATGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS CAA 90 bp | ACCTCTGGAGGCACATTTCTCTCCACAGTGAAGGGGGCCCCCAGCTaGTACTTCTGCCTGCAGACCATGTTCACAGCAGCTCTGCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: TSGGTFLSTVKGAPS*YFCLQTMFTAALLV Trigger: GACGAGCAGAGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGTGCCTCCAGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000236838.2 |
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| CDS TCA 72 bp | ACACTGTCACCTCTGGAGGCACATTTCTCTCCACAGTaGAGGGGGCCCCCAGCTTGTACTTCTGCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TLSPLEAHFSPQ*RGPPACTSACR Trigger: TCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGTGCCTCCAGAGGTGACAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000236838.2 |
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| CDS CAA 72 bp | GGCACATTTCTCTCCACAGTGAAGGGGGCCCCCAGCTaGTACTTCTGCCTGCAGACCATGTTCACAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GTFLSTVKGAPS*YFCLQTMFTAA Trigger: AGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000236838.2 |
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| CDS CAA 72 bp | AAGCCATTTCTCTCCACAGTGAAGGGGGCCCCCAGCTaGTACTTCTGCCTGCAGACCATGTTCACAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KPFLSTVKGAPS*YFCLQTMFTAA Trigger: AGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACAAGCTGGGGGCCCCCTTCACTGTGGAGAGAAATGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167280.8 |
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| CDS GCA 72 bp | TGTACTTCTGCCTGCAGACCATGTTCACAGCAGCTCTaGTCGTCTCCAGGAGATCCAGGCGTTTGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: CTSACRPCSQQL*SSPGDPGVCST Trigger: AGTGGAACAAACGCCTGGATCTCCTGGAGACGAGCAGAGCTGCTGTGAACATGGTCTGCAGGCAGAAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS GCA 72 bp | AGGGTTGAGAATGGAGACTCTCTCTTGAGGCCTCATTaGCAGGCTGAGTCTCCACAGATGCTTTCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RVENGDSLLRPH*QAESPQMLSEP Trigger: AGGCTCAGAAAGCATCTGTGGAGACTCAGCCTGGCAATGAGGCCTCAAGAGAGAGTCTCCATTCTCAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 |
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| CDS GCA 72 bp | CCCCACCAGGAAGACAATCAGCCCAAGCAGGAACACTaGAGCTCCACTCAGTATCTTTTTCCAGGAATATTC | + |
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Preference number: 6 (lower is better) Translates to: PHQEDNQPKQEH*SSTQYLFPGIF Trigger: GAATATTCCTGGAAAAAGATACTGAGTGGAGCTGCAGTGTTCCTGCTTGGGCTGATTGTCTTCCTGGTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS TCA 72 bp | GCTCCACTCAGTATCTTTTTCCAGGAATATTCAGACTaGGCCATCCATGCCACAGAAACAGGTCTCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APLSIFFQEYSD*AIHATETGLRR Trigger: CCTCCTGAGACCTGTTTCTGTGGCATGGATGGCTCAGTCTGAATATTCCTGGAAAAAGATACTGAGTGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095342.11 ENSMUST00000167280.8 ENSMUST00000236838.2 |
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| CDS TCA 72 bp | ACCTTTCCAGAAGCATCTTGCAGATTGACTGACTGGTaGGTACTTCATGGTTGTGGTCATTTCTATGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TFPEASCRLTDW*VLHGCGHFYAK Trigger: TTTGGCATAGAAATGACCACAACCATGAAGTACTCACCAGTCAGTCAATCTGCAAGATGCTTCTGGAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236838.2 |
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