RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for H2-M3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000016206

Ensembl transcript IDs: ENSMUST00000038580.7

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGGAGGAGACACAGGTATGGAGAGGAGACTCAGTCCTCAGGGATaGCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGACAC +
Preference number: 1 (lower is better)
Translates to: KGGDTGMERRLSPQG*PGLLTLSHCADRRH
Trigger: GTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCATACCTGTGTCTCCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR TCA 90 bp TGTGCTGACAGGAGACACACCATGAGATGCCAACTTTCTAAATGGTaGAAGAAGCATCAGAACTTAATCACTGTTCCTGCTGGCAGTCTG +
Preference number: 1 (lower is better)
Translates to: CADRRHTMRCQLSKW*KKHQNLITVPAGSL
Trigger: CAGACTGCCAGCAGGAACAGTGATTAAGTTCTGATGCTTCTTTCACCATTTAGAAAGTTGGCATCTCATGGTGTGTCTCCTGTCAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR CAA 90 bp ATGGAGAGGAGACTCAGTCCTCAGGGATGCCCTGGGCTGCTCACTTaGTCACACTGTGCTGACAGGAGACACACCATGAGATGCCAACTT +
Preference number: 2 (lower is better)
Translates to: MERRLSPQGCPGLLT*SHCADRRHTMRCQL
Trigger: AAGTTGGCATCTCATGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR-3UTR CCA 90 bp ACATCCTTATTTTTCAATAGGGAAGAAGCTGCCCATAGAAACCTAAAGTTCCACGAGGAGACACAGGTATaGAGAGGAGACTCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: TSLFFNREEAAHRNLKFHEETQV*RGDSVL
Trigger: GAGGACTGAGTCTCCTCTCCATACCTGTGTCTCCTC...GTGGAACTTTAGGTTTCTATGGGCAGCTTCTTCCCTATTGAAAAATAAGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR GCA 72 bp TGGAGAGGAGACTCAGTCCTCAGGGATGCCCTGGGCTaGTCACTTTGTCACACTGTGCTGACAGGAGACACA +
Preference number: 3 (lower is better)
Translates to: WRGDSVLRDALG*SLCHTVLTGDT
Trigger: TGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR TCA 72 bp TCACTTTGTCACACTGTGCTGACAGGAGACACACCATaGGATGCCAACTTTCTAAATGGTGAAAGAAGCATC +
Preference number: 3 (lower is better)
Translates to: SLCHTVLTGDTP*DANFLNGERSI
Trigger: GATGCTTCTTTCACCATTTAGAAAGTTGGCATCTCATGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR TCA 72 bp AGGAGACACACCATGAGATGCCAACTTTCTAAATGGTaGAAGAAGCATCAGAACTTAATCACTGTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: RRHTMRCQLSKW*KKHQNLITVPA
Trigger: AGCAGGAACAGTGATTAAGTTCTGATGCTTCTTTCACCATTTAGAAAGTTGGCATCTCATGGTGTGTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR TCA 90 bp AGGGATGCCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGACACACCACCCACGGCCCGGCCGTaGCACCGCAGTGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: RDALGCSLCHTVLTGDTPPTARP*HRSVEI
Trigger: TATTTCCACACTGCGGTGTCACGGCCGGGCCGTGGG...TGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR TCA 90 bp AGGGATGCCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGACACACCAATCCACTGCAGGATGTaGGAGCCGCCTTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: RDALGCSLCHTVLTGDTPIHCRM*EPPSLW
Trigger: CCAGAGTGAAGGCGGCTCTCACATCCTGCAGTGGAT...TGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR GCA 90 bp AGTCCTCAGGGATGCCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGAGTGATGGGCCACATGTaGCTTTGGGGGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SPQGCPGLLTLSHCADRRVMGHM*LWGICS
Trigger: CGAGCAGATCCCCCAAAGGCACATGTGGCCCATCAC...TCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CCA 90 bp ATGGAGAGGAGACTCAGTCCTCAGGGATGCCCTGGGCTGCTCACTTTGTCACACGGCCACATGTGCCTTTaGGGGATCTGCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: MERRLSPQGCPGLLTLSHGHMCL*GICSLK
Trigger: CTTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCC...GTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR TCA 90 bp ATGGAGAGGAGACTCAGTCCTCAGGGATGCCCTGGGCTGCTCACTTTGTCACACCGGCTCTTCGTGATCTaGGACACCATGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: MERRLSPQGCPGLLTLSHRLFVI*DTMSTA
Trigger: TGCAGTGGACATGGTGTCTCAGATCACGAAGAGCCG...GTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR TCA 90 bp AGTCCTGGATCCCCCTGTGGTACAGGTGAGAAAAGGAGGAGACACAGGTATGGACCTCCACATAGGCCCTaGAGTACTCTGCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SPGSPCGTGEKRRRHRYGPPHRP*STLLCQ
Trigger: CTGGCACAGCAGAGTACTTCAGGGCCTATGTGGAGG...TCCATACCTGTGTCTCCTCCTTTTCTCACCTGTACCACAGGGGGATCCAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR GCA 90 bp GAAGAAGTCCTGGATCCCCCTGTGGTACAGGTGAGAAAAGGAGGAGACACAGGTGAGACCACCACCATGTaGAGGAGAGCGCGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: EEVLDPPVVQVRKGGDTGETTTM*RRARLL
Trigger: AAGCAACCGCGCTCTCCTGCACATGGTGGTGGTCTC...ACCTGTGTCTCCTCCTTTTCTCACCTGTACCACAGGGGGATCCAGGACTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
3UTR CAA 72 bp AGACTCAGTCCTCAGGGATGCCCTGGGCTGCTCACTTaGTCACACTGTGCTGACAGGAGACACACCATGAGA +
Preference number: 4 (lower is better)
Translates to: RLSPQGCPGLLT*SHCADRRHTMR
Trigger: TCTCATGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CCA 90 bp AGGGATGCCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGACACACCACTCCTTCCAGTACTCTaGTCTTTCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: RDALGCSLCHTVLTGDTPLLPVL*SFLLHP
Trigger: TGGATGGAGAAGGAAAGACCAGAGTACTGGAAGGAG...TGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR GCA 90 bp GAAGAAGTCCTGGATCCCCCTGTGGTACAGGTGAGAAAAGGAGGAGACACAGGTCAGGGTCCGAAGGTTTaGTCTGGCACTTTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: EEVLDPPVVQVRKGGDTGQGPKV*SGTLCN
Trigger: ATTGCACAAAGTGCCAGAGCAAACCTTCGGACCCTG...ACCTGTGTCTCCTCCTTTTCTCACCTGTACCACAGGGGGATCCAGGACTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR GCA 90 bp AGGGATGCCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGACACACCATGCTCTGGCACTTTGTaGAATATTCTTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: RDALGCSLCHTVLTGDTPCSGTL*NILDLE
Trigger: CTCAAGGTCAAGAATATTGCACAAAGTGCCAGAGCA...TGGTGTGTCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR GCA 90 bp AGTCCTGGATCCCCCTGTGGTACAGGTGAGAAAAGGAGGAGACACAGGTATGGATCGGAATTTCCTCAATaGTATCACAGCGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SPGSPCGTGEKRRRHRYGSEFPQ*YHSAET
Trigger: AGTTTCAGCGCTGTGATAGCATTGAGGAAATTCCGA...TCCATACCTGTGTCTCCTCCTTTTCTCACCTGTACCACAGGGGGATCCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CCA 90 bp AGTCCTGGATCCCCCTGTGGTACAGGTGAGAAAAGGAGGAGACACAGGTATGGATCCGAAGGTTTGCTCTaGCACTTTGTGCAATATTCT +
Preference number: 4 (lower is better)
Translates to: SPGSPCGTGEKRRRHRYGSEGLL*HFVQYS
Trigger: AGAATATTGCACAAAGTGCCAGAGCAAACCTTCGGA...TCCATACCTGTGTCTCCTCCTTTTCTCACCTGTACCACAGGGGGATCCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR TCA 90 bp ACATCCTTATTTTTCAATAGGGAAGAAGCTGCCCATAGAAACCTAAAGTTCCACCCTTTGGGTCTCGGGTaGTGGGCCACATGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: TSLFFNREEAAHRNLKFHPLGLG*WATCAF
Trigger: AAAGGCACATGTGGCCCATCACCCGAGACCCAAAGG...GTGGAACTTTAGGTTTCTATGGGCAGCTTCTTCCCTATTGAAAAATAAGGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CCA 90 bp TCCTTATTTTTCAATAGGGAAGAAGCTGCCCATAGAAACCTAAAGTTCCACAAGTTCCGCAGGAATCTGTaGAGCAGCTCCAGGCACTCT +
Preference number: 4 (lower is better)
Translates to: SLFFNREEAAHRNLKFHKFRRNL*SSSRHS
Trigger: AGAGTGCCTGGAGCTGCTCCACAGATTCCTGCGGAA...CTTGTGGAACTTTAGGTTTCTATGGGCAGCTTCTTCCCTATTGAAAAATAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CAA 90 bp ATGGAGAGGAGACTCAGTCCTCAGGGATGCCCTGGGCTGCTCACTTTGTCACACGGGCCACATGTGCCTTaGGGGGATCTGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: MERRLSPQGCPGLLTLSHGPHVP*GDLLAE
Trigger: TTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCCC...GTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CAA 90 bp AGTCCTCAGGGATGCCCTGGGCTGCTCACTTTGTCACACTGTGCTGACAGGAGACCTGCACCCCTCCTCTaGCACACCACAACAATAGTG +
Preference number: 5 (lower is better)
Translates to: SPQGCPGLLTLSHCADRRPAPLL*HTTTIV
Trigger: CACTATTGTTGTGGTGTGCAAGAGGAGGGGTGCAGG...TCTCCTGTCAGCACAGTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS GCA 90 bp CCTCAAGGTAACATCACCTTTGGGTCTCGGGTGATGGGCCACATGTaGCTTTGGGGGATCTGCTCGCTGAAGAATCTCCTTGCCATTCCG +
Preference number: 5 (lower is better)
Translates to: PQGNITFGSRVMGHM*LWGICSLKNLLAIP
Trigger: CGGAATGGCAAGGAGATTCTTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCCCATCACCCGAGACCCAAAGGTGATGTTACCTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CCA 90 bp GGTAACATCACCTTTGGGTCTCGGGTGATGGGCCACATGTGCCTTTaGGGGATCTGCTCGCTGAAGAATCTCCTTGCCATTCCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GNITFGSRVMGHMCL*GICSLKNLLAIPQE
Trigger: TTCCTGCGGAATGGCAAGGAGATTCTTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCCCATCACCCGAGACCCAAAGGTGATGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS GCA 90 bp TCTCCATCCAAGGTGCACGAGGTTCCATCCTCGGAATTTCCTCAATaGTATCACAGCGCTGAAACTGCACGTCGTCAACATAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: SPSKVHEVPSSEFPQ*YHSAETARRQHSPQ
Trigger: CTGTGGGCTATGTTGACGACGTGCAGTTTCAGCGCTGTGATAGCATTGAGGAAATTCCGAGGATGGAACCTCGTGCACCTTGGATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CAA 90 bp ATGGAGAGGAGACTCAGTCCTCAGGGATGCCCTGGGCTGCTCACTTTGTCACACGCAATATTCTTGACCTaGAGTTTCAGCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: MERRLSPQGCPGLLTLSHAIFLT*SFSSFQ
Trigger: CTGGAAGGAGCTGAAACTCAAGGTCAAGAATATTGC...GTGTGACAAAGTGAGCAGCCCAGGGCATCCCTGAGGACTGAGTCTCCTCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS-3UTR CAA 90 bp GAAGAAGTCCTGGATCCCCCTGTGGTACAGGTGAGAAAAGGAGGAGACACAGGTGTTTGCTCTGGCACTTaGTGCAATATTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: EEVLDPPVVQVRKGGDTGVCSGT*CNILDL
Trigger: AAGGTCAAGAATATTGCACAAAGTGCCAGAGCAAAC...ACCTGTGTCTCCTCCTTTTCTCACCTGTACCACAGGGGGATCCAGGACTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS GCA 72 bp GTGCCTTTGGGGGATCTGCTCGCTGAAGAATCTCCTTaGCATTCCGCAGGAATCTGTGGAGCAGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: VPLGDLLAEESP*HSAGICGAAPG
Trigger: GCCTGGAGCTGCTCCACAGATTCCTGCGGAATGGCAAGGAGATTCTTCAGCGAGCAGATCCCCCAAAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CAA 72 bp CACCTTTGGGTCTCGGGTGATGGGCCACATGTGCCTTaGGGGGATCTGCTCGCTGAAGAATCTCCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: HLWVSGDGPHVP*GDLLAEESPCH
Trigger: ATGGCAAGGAGATTCTTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCCCATCACCCGAGACCCAAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CCA 72 bp ACCTTTGGGTCTCGGGTGATGGGCCACATGTGCCTTTaGGGGATCTGCTCGCTGAAGAATCTCCTTGCCATT +
Preference number: 6 (lower is better)
Translates to: TFGSRVMGHMCL*GICSLKNLLAI
Trigger: AATGGCAAGGAGATTCTTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCCCATCACCCGAGACCCAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS GCA 72 bp AACATCACCTTTGGGTCTCGGGTGATGGGCCACATGTaGCTTTGGGGGATCTGCTCGCTGAAGAATCTCCTT +
Preference number: 6 (lower is better)
Translates to: NITFGSRVMGHM*LWGICSLKNLL
Trigger: AAGGAGATTCTTCAGCGAGCAGATCCCCCAAAGGCACATGTGGCCCATCACCCGAGACCCAAAGGTGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS GCA 72 bp GCGGAGCAGGGTCCGAAGGTTTGCTCTGGCACTTTGTaGAATATTCTTGACCTTGAGTTTCAGCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: AEQGPKVCSGTL*NILDLEFQLLP
Trigger: TGGAAGGAGCTGAAACTCAAGGTCAAGAATATTGCACAAAGTGCCAGAGCAAACCTTCGGACCCTGCTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CAA 72 bp GTAGCGGAGCAGGGTCCGAAGGTTTGCTCTGGCACTTaGTGCAATATTCTTGACCTTGAGTTTCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: VAEQGPKVCSGT*CNILDLEFQLL
Trigger: AAGGAGCTGAAACTCAAGGTCAAGAATATTGCACAAAGTGCCAGAGCAAACCTTCGGACCCTGCTCCGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CAA 90 bp AGGGTCCGAAGGTTTGCTCTGGCACTTTGTGCAATATTCTTGACCTaGAGTTTCAGCTCCTTCCAGTACTCTGGTCTTTCCTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: RVRRFALALCAIFLT*SFSSFQYSGLSFSI
Trigger: GATGGAGAAGGAAAGACCAGAGTACTGGAAGGAGCTGAAACTCAAGGTCAAGAATATTGCACAAAGTGCCAGAGCAAACCTTCGGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CAA 72 bp GTCCGAAGGTTTGCTCTGGCACTTTGTGCAATATTCTaGACCTTGAGTTTCAGCTCCTTCCAGTACTCTGGT +
Preference number: 6 (lower is better)
Translates to: VRRFALALCAIF*TLSFSSFQYSG
Trigger: ACCAGAGTACTGGAAGGAGCTGAAACTCAAGGTCAAGAATATTGCACAAAGTGCCAGAGCAAACCTTCGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7
CDS CAA 72 bp AGGTTTGCTCTGGCACTTTGTGCAATATTCTTGACCTaGAGTTTCAGCTCCTTCCAGTACTCTGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: RFALALCAIFLT*SFSSFQYSGLS
Trigger: GGAAAGACCAGAGTACTGGAAGGAGCTGAAACTCAAGGTCAAGAATATTGCACAAAGTGCCAGAGCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038580.7