Pregenerated sensors for H2-M10.6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037130Ensembl transcript IDs: ENSMUST00000041398.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCTaGGCTGAACTCACTTCCTTGTGTTGTCTTTACAGGAGACAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GEDTQVSVEGSHAQV*AELTSLCCLYRRQR Trigger: TCTCTGTCTCCTGTAAAGACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| 3UTR TCA 72 bp | GGTCAGTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTaGACTCACTTCCTTGTGTTGTCTTTACAGGAGACA | + |
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Preference number: 3 (lower is better) Translates to: GQCGGESCSGLG*THFLVLSLQET Trigger: TGTCTCCTGTAAAGACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| 3UTR CCA 72 bp | ACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCTaGGCTGAACTCACTTCCTTGTGTTGTCTTTACAGG | + |
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Preference number: 3 (lower is better) Translates to: TQVSVEGSHAQV*AELTSLCCLYR Trigger: CCTGTAAAGACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACTGACCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| 3UTR-3UTR CAA 90 bp | TCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGGAGAGATGACTGGACTCACTTCCTTGTGTaGTCTTTACAGGAGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: SLMEISQACLSWIRRDDWTHFLV*SLQETE Trigger: CTCTGTCTCCTGTAAAGACAACACAAGGAAGTGAGT...CCAGTCATCTCTCCTGATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| 3UTR-3UTR CAA 90 bp | GAGATGACTGGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCGCTGAACTCACTTCCTaGTGTTGTCTTTACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: EMTGEDTQVSVEGSHAQVAELTS*CCLYRR Trigger: TCTCCTGTAAAGACAACACAAGGAAGTGAGTTCAGC...GACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCCAGTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR TCA 90 bp | TCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGGAGAGATGACTGGCGTATCCGACCTGGATaGACCGGGCCTCCAACATGC | + |
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Preference number: 4 (lower is better) Translates to: SLMEISQACLSWIRRDDWRIRPG*TGPPTC Trigger: GCATGTTGGAGGCCCGGTTCATCCAGGTCGGATACG...CCAGTCATCTCTCCTGATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR TCA 90 bp | GAGATGACTGGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCGCTCCCATTTCAGAGTaGGTGGCCCAGGTAACCCTT | + |
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Preference number: 4 (lower is better) Translates to: EMTGEDTQVSVEGSHAQVAPISE*VAQVTL Trigger: AAGGGTTACCTGGGCCACTCACTCTGAAATGGGAGC...GACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCCAGTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | GTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTCCTGGGTCAGGTCTATTaGCATCAACAGGAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VWRGVMLRSGLNSLPCVVLGQVY*HQQEEE Trigger: CTCCTCCTCCTGTTGATGGCAATAGACCTGACCCAG...GACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | GGAACCAAAGGTCAGTCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCACCTACTTCACCCTCTaGAGTCCAAGAGTTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GTKGQSLMEISQACLSWITYFTL*SPRVQV Trigger: GACCTGAACTCTTGGACTGCAGAGGGTGAAGTAGGT...GATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGACTGACCTTTGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CCA 90 bp | TCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGGAGAGATGACTGGGAGCCTGCACAATACTaGGTCAGGTCTATTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: SLMEISQACLSWIRRDDWEPAQY*VRSIAI Trigger: GATGGCAATAGACCTGACCCAGTATTGTGCAGGCTC...CCAGTCATCTCTCCTGATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTACCGGGCCTCCAACATaGCAGGCTCCAAAATCACAA | + |
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Preference number: 4 (lower is better) Translates to: SVEGSHAQVWAELTSLCCTGPPT*QAPKSQ Trigger: TTGTGATTTTGGAGCCTGGCATGTTGGAGGCCCGGT...ACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | GAGATGACTGGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCCAGGCCGATGAGAATTaGTATGATGGGGATGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: EMTGEDTQVSVEGSHAQVQADEN*YDGDGV Trigger: CACACCATCCCCATCATAGCAATTCTCATCGGCCTG...GACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCCAGTCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | TCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGGAGAGATGACTGGACAATGTTGAAAATCTaGAGCCAGTGTGAGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLMEISQACLSWIRRDDWTMLKI*SQCEPA Trigger: TGCAGGCTCACACTGGCTGCAGATTTTCAACATTGT...CCAGTCATCTCTCCTGATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | GAGATGACTGGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCCATCATTTGCCACGTTaGAGCCATACACTTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: EMTGEDTQVSVEGSHAQVHHLPR*SHTLPA Trigger: TGCAGGAAGTGTATGGCTGCAACGTGGCAAATGATG...GACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCCAGTCATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR TCA 90 bp | AGTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTCATATCCATAGTATGTaGGCCGGTAGTGACCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: SVEGSHAQVWAELTSLCCHIHSM*AGSDLR Trigger: TCGAAGGTCACTACCGGCTCACATACTATGGATATG...ACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR TCA 90 bp | GTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTCGCTCCTGGTATGTCTTaGATTTTTCACCTACTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VWRGVMLRSGLNSLPCVVAPGMS*IFHLLH Trigger: GTGAAGTAGGTGAAAAATTCAAGACATACCAGGAGC...GACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | AGTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTGAAGCTCAGGGCTTTTaGTGTCTCTTTCTCCCAATA | + |
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Preference number: 4 (lower is better) Translates to: SVEGSHAQVWAELTSLCCEAQGF*CLFLPI Trigger: TATTGGGAGAAAGAGACAGCAAAAGCCCTGAGCTTC...ACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CCA 90 bp | AGTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTATCCCTGAAACTGTATaGAGTCTACGTATCCGACCT | + |
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Preference number: 4 (lower is better) Translates to: SVEGSHAQVWAELTSLCCIPETV*SLRIRP Trigger: AGGTCGGATACGTAGACTCCATACAGTTTCAGGGAT...ACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CCA 90 bp | GAGATGACTGGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCTTGCATCCTTGCATTTaGTTCTTTGCTGTCGAATCC | + |
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Preference number: 4 (lower is better) Translates to: EMTGEDTQVSVEGSHAQVLHPCI*FFAVES Trigger: GGATTCGACAGCAAAGAACCAAATGCAAGGATGCAA...GACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCCAGTCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR TCA 90 bp | AATTTACAACTCACTGGAACCAAAGGTCAGTCACTGATGGAGATCTCCCAGGCCCCTTCATGGTTGACATaGCATGTGTATCTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NLQLTGTKGQSLMEISQAPSWLT*HVYLSS Trigger: AGAGCTGAGATACACATGTCATGTCAACCATGAAGG...GGCCTGGGAGATCTCCATCAGTGACTGACCTTTGGTTCCAGTGAGTTGTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR GCA 90 bp | AATTTACAACTCACTGGAACCAAAGGTCAGTCACTGATGGAGATCTCCCAGGCCTCTGTCATGCCTCCTTaGTCCTGGTATGTCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: NLQLTGTKGQSLMEISQASVMPP*SWYVLN Trigger: ATTCAAGACATACCAGGAGCAAGGAGGCATGACAGA...GGCCTGGGAGATCTCCATCAGTGACTGACCTTTGGTTCCAGTGAGTTGTAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR TCA 90 bp | AATTTACAACTCACTGGAACCAAAGGTCAGTCACTGATGGAGATCTCCCAGGCCCCAAAATCACAATGTTaGAAATCTGCAGCCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NLQLTGTKGQSLMEISQAPKSQC*KSAASV Trigger: CACACTGGCTGCAGATTTTCAACATTGTGATTTTGG...GGCCTGGGAGATCTCCATCAGTGACTGACCTTTGGTTCCAGTGAGTTGTAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CAA 90 bp | TCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGGAGAGATGACTGGACTGGGTCAGGTCTATaGCCATCAACAGGAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLMEISQACLSWIRRDDWTGSGL*PSTGGG Trigger: TCCTCCTCCTGTTGATGGCAATAGACCTGACCCAGT...CCAGTCATCTCTCCTGATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS TCA 90 bp | GCCCGAGGTTGCATCCTTGCATTTGGTTCTTTGCTGTCGAATCCCTaGAACTGTATGGAGTCTACGTATCCGACCTGGATGAACCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: ARGCILAFGSLLSNP*NCMESTYPTWMNRA Trigger: GGCCCGGTTCATCCAGGTCGGATACGTAGACTCCATACAGTTTCAGGGATTCGACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS GCA 90 bp | CACAGTTCCCACCACCAAAGCTCCAAGAACCAGGCCGATGAGAATTaGTATGATGGGGATGGTGTGTGGAGGCTCCCATTTCAGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: HSSHHQSSKNQADEN*YDGDGVWRLPFQSE Trigger: CTCACTCTGAAATGGGAGCCTCCACACACCATCCCCATCATAGCAATTCTCATCGGCCTGGTTCTTGGAGCTTTGGTGGTGGGAACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CAA 90 bp | GAGATGACTGGAGAAGACACACAGGTCAGTGTGGAGGGGAGTCATGCTCAGGTCCCCGAGGTTGCATCCTaGCATTTGGTTCTTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: EMTGEDTQVSVEGSHAQVPEVAS*HLVLCC Trigger: ACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGG...GACCTGAGCATGACTCCCCTCCACACTGACCTGTGTGTCTTCTCCAGTCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CAA 90 bp | GGAACCAAAGGTCAGTCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGAAGCTCAGGGCTTTaGCTGTCTCTTTCTCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: GTKGQSLMEISQACLSWIRSSGL*LSLSPN Trigger: ATTGGGAGAAAGAGACAGCAAAAGCCCTGAGCTTCT...GATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGACTGACCTTTGGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS GCA 90 bp | CGGGCCTCCAACATGCCAGGCTCCAAAATCACAATGTTGAAAATCTaGAGCCAGTGTGAGCCTGCACAATACTGGGTCAGGTCTATTGCC | + |
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Preference number: 5 (lower is better) Translates to: RASNMPGSKITMLKI*SQCEPAQYWVRSIA Trigger: GGCAATAGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGATTTTCAACATTGTGATTTTGGAGCCTGGCATGTTGGAGGCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS GCA 90 bp | CTCAGGGCTTTTGCTGTCTCTTTCTCCCAATATTCAGGTGGCTCCTaGTTCATCCAAGCAGCCCGAGGTTGCATCCTTGCATTTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LRAFAVSFSQYSGGS*FIQAARGCILAFGS Trigger: AGAACCAAATGCAAGGATGCAACCTCGGGCTGCTTGGATGAAGCAGGAGCCACCTGAATATTGGGAGAAAGAGACAGCAAAAGCCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CCA 90 bp | TGGCTCCTGCTTCATCCAAGCAGCCCGAGGTTGCATCCTTGCATTTaGTTCTTTGCTGTCGAATCCCTGAAACTGTATGGAGTCTACGTA | + |
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Preference number: 5 (lower is better) Translates to: WLLLHPSSPRLHPCI*FFAVESLKLYGVYV Trigger: TACGTAGACTCCATACAGTTTCAGGGATTCGACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGGCTGCTTGGATGAAGCAGGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CAA 90 bp | TCACTGATGGAGATCTCCCAGGCCTGCCTCTCCTGGATCAGGAGAGATGACTGGTCCAAAATCACAATGTaGAAAATCTGCAGCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SLMEISQACLSWIRRDDWSKITM*KICSQC Trigger: ACACTGGCTGCAGATTTTCAACATTGTGATTTTGGA...CCAGTCATCTCTCCTGATCCAGGAGAGGCAGGCCTGGGAGATCTCCATCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CAA 90 bp | AGTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTGTTGCATCCTTGCATTaGGTTCTTTGCTGTCGAATC | + |
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Preference number: 5 (lower is better) Translates to: SVEGSHAQVWAELTSLCCVASLH*VLCCRI Trigger: GATTCGACAGCAAAGAACCAAATGCAAGGATGCAAC...ACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS TCA 90 bp | CATGCCAGGCTCCAAAATCACAATGTTGAAAATCTGCAGCCAGTGTaGGCCTGCACAATACTGGGTCAGGTCTATTGCCATCAACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: HARLQNHNVENLQPV*ACTILGQVYCHQQE Trigger: CTCCTGTTGATGGCAATAGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGATTTTCAACATTGTGATTTTGGAGCCTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS-3UTR CAA 90 bp | GTGTGGAGGGGAGTCATGCTCAGGTCTGGGCTGAACTCACTTCCTTGTGTTGTCTGCTCCTGGTATGTCTaGAATTTTTCACCTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: VWRGVMLRSGLNSLPCVVCSWYV*NFSPTS Trigger: TGAAGTAGGTGAAAAATTCAAGACATACCAGGAGCA...GACAACACAAGGAAGTGAGTTCAGCCCAGACCTGAGCATGACTCCCCTCCACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS GCA 72 bp | GAGCCGGTAGTGACCTTCGAGGAAGCTCCCATCATTTaGCACGTTGCAGCCATACACTTCCTGCAGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EPVVTFEEAPII*HVAAIHFLQGV Trigger: CACACCCTGCAGGAAGTGTATGGCTGCAACGTGGCAAATGATGGGAGCTTCCTCGAAGGTCACTACCGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS GCA 72 bp | CACCACCAAAGCTCCAAGAACCAGGCCGATGAGAATTaGTATGATGGGGATGGTGTGTGGAGGCTCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: HHQSSKNQADEN*YDGDGVWRLPF Trigger: AAATGGGAGCCTCCACACACCATCCCCATCATAGCAATTCTCATCGGCCTGGTTCTTGGAGCTTTGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CAA 72 bp | TTCAGGTGGCTCCTGCTTCATCCAAGCAGCCCGAGGTaGCATCCTTGCATTTGGTTCTTTGCTGTCGAATCC | + |
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Preference number: 6 (lower is better) Translates to: FRWLLLHPSSPR*HPCIWFFAVES Trigger: GGATTCGACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGGCTGCTTGGATGAAGCAGGAGCCACCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CAA 90 bp | TGGATGAACCGGGCCTCCAACATGCCAGGCTCCAAAATCACAATGTaGAAAATCTGCAGCCAGTGTGAGCCTGCACAATACTGGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: WMNRASNMPGSKITM*KICSQCEPAQYWVR Trigger: CCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGATTTTCAACATTGTGATTTTGGAGCCTGGCATGTTGGAGGCCCGGTTCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CAA 90 bp | CTCCCAATATTCAGGTGGCTCCTGCTTCATCCAAGCAGCCCGAGGTaGCATCCTTGCATTTGGTTCTTTGCTGTCGAATCCCTGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: LPIFRWLLLHPSSPR*HPCIWFFAVESLKL Trigger: CAGTTTCAGGGATTCGACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGGCTGCTTGGATGAAGCAGGAGCCACCTGAATATTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CCA 72 bp | TTGAAAATCTGCAGCCAGTGTGAGCCTGCACAATACTaGGTCAGGTCTATTGCCATCAACAGGAGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LKICSQCEPAQY*VRSIAINRRRR Trigger: CCTCCTCCTCCTGTTGATGGCAATAGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGATTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CAA 72 bp | CGGGCCTCCAACATGCCAGGCTCCAAAATCACAATGTaGAAAATCTGCAGCCAGTGTGAGCCTGCACAATAC | + |
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Preference number: 6 (lower is better) Translates to: RASNMPGSKITM*KICSQCEPAQY Trigger: GTATTGTGCAGGCTCACACTGGCTGCAGATTTTCAACATTGTGATTTTGGAGCCTGGCATGTTGGAGGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS TCA 72 bp | GGGCCTCCAACATGCCAGGCTCCAAAATCACAATGTTaGAAATCTGCAGCCAGTGTGAGCCTGCACAATACT | + |
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Preference number: 6 (lower is better) Translates to: GPPTCQAPKSQC*KSAASVSLHNT Trigger: AGTATTGTGCAGGCTCACACTGGCTGCAGATTTTCAACATTGTGATTTTGGAGCCTGGCATGTTGGAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS GCA 72 bp | AAGCAGCCCGAGGTTGCATCCTTGCATTTGGTTCTTTaGTGTCGAATCCCTGAAACTGTATGGAGTCTACGT | + |
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Preference number: 6 (lower is better) Translates to: KQPEVASLHLVL*CRIPETVWSLR Trigger: ACGTAGACTCCATACAGTTTCAGGGATTCGACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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| CDS CCA 72 bp | CTTCATCCAAGCAGCCCGAGGTTGCATCCTTGCATTTaGTTCTTTGCTGTCGAATCCCTGAAACTGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: LHPSSPRLHPCI*FFAVESLKLYG Trigger: TCCATACAGTTTCAGGGATTCGACAGCAAAGAACCAAATGCAAGGATGCAACCTCGGGCTGCTTGGATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041398.5 |
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