Pregenerated sensors for H2-M10.2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023083

Ensembl transcript IDs: ENSMUST00000023845.7

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CGCAGGACTTGTGCTGTCTCCTTCTCCCAATATTCAGGTGGCTCCTaGTCCATCCATGCAGCCCGAGGTTGCATCCTTGCAGTCGGTTCT	+
Preference number: 5 (lower is better) Translates to: RRTCAVSFSQYSGGS*SIHAARGCILAVGS Trigger: AGAACCGACTGCAAGGATGCAACCTCGGGCTGCATGGATGGAGCAGGAGCCACCTGAATATTGGGAGAAGGAGACAGCACAAGTCCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 90 bp	TTCAGGTGGCTCCTGCTCCATCCATGCAGCCCGAGGTTGCATCCTTaGAGTCGGTTCTTTGCTGTCAAATCCCTGATACTGTATGGAGTC	+
Preference number: 5 (lower is better) Translates to: FRWLLLHPCSPRLHP*SRFFAVKSLILYGV Trigger: GACTCCATACAGTATCAGGGATTTGACAGCAAAGAACCGACTGCAAGGATGCAACCTCGGGCTGCATGGATGGAGCAGGAGCCACCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS CCA 90 bp	ATCACAGTATTGAAAGTCTGCAGCCAGTGTGAGCCTGCACAATACTaGGTCAGGTCCAAGGCCACCAAGAGGAGGAGGAAGTTGCAGGGT	+
Preference number: 5 (lower is better) Translates to: ITVLKVCSQCEPAQY*VRSKATKRRRKLQG Trigger: ACCCTGCAACTTCCTCCTCCTCTTGGTGGCCTTGGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGACTTTCAATACTGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS TCA 90 bp	CGTGCCATGCTTCAAAATCACAGTATTGAAAGTCTGCAGCCAGTGTaGGCCTGCACAATACTGGGTCAGGTCCAAGGCCACCAAGAGGAG	+
Preference number: 5 (lower is better) Translates to: RAMLQNHSIESLQPV*ACTILGQVQGHQEE Trigger: CTCCTCTTGGTGGCCTTGGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGACTTTCAATACTGTGATTTTGAAGCATGGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 90 bp	GCTCCATCCATGCAGCCCGAGGTTGCATCCTTGCAGTCGGTTCTTTaGTGTCAAATCCCTGATACTGTATGGAGTCTACATAGCCGACCT	+
Preference number: 5 (lower is better) Translates to: APSMQPEVASLQSVL*CQIPDTVWSLHSRP Trigger: AGGTCGGCTATGTAGACTCCATACAGTATCAGGGATTTGACAGCAAAGAACCGACTGCAAGGATGCAACCTCGGGCTGCATGGATGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	TCAGGTGGCTCCTGCTCCATCCATGCAGCCCGAGGTTaGATCCTTGCAGTCGGTTCTTTGCTGTCAAATCCC	+
Preference number: 6 (lower is better) Translates to: SGGSCSIHAARG*ILAVGSLLSNP Trigger: GGGATTTGACAGCAAAGAACCGACTGCAAGGATGCAACCTCGGGCTGCATGGATGGAGCAGGAGCCACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	GCCTACATTCACCAAGTCTGTCTTCAGGAACCCAGCTaGCTCTCCCTGTGCTGTCCAGGAACTCAGGTCCTC	+
Preference number: 6 (lower is better) Translates to: AYIHQVCLQEPS*LSLCCPGTQVL Trigger: GAGGACCTGAGTTCCTGGACAGCACAGGGAGAGGCAGCTGGGTTCCTGAAGACAGACTTGGTGAATGTAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	TGTGCTGTCTCCTTCTCCCAATATTCAGGTGGCTCCTaGTCCATCCATGCAGCCCGAGGTTGCATCCTTGCA	+
Preference number: 6 (lower is better) Translates to: CAVSFSQYSGGS*SIHAARGCILA Trigger: TGCAAGGATGCAACCTCGGGCTGCATGGATGGAGCAGGAGCCACCTGAATATTGGGAGAAGGAGACAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS CCA 72 bp	TTGAAAGTCTGCAGCCAGTGTGAGCCTGCACAATACTaGGTCAGGTCCAAGGCCACCAAGAGGAGGAGGAAG	+
Preference number: 6 (lower is better) Translates to: LKVCSQCEPAQY*VRSKATKRRRK Trigger: CTTCCTCCTCCTCTTGGTGGCCTTGGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGACTTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS CAA 72 bp	TTCAGGTGGCTCCTGCTCCATCCATGCAGCCCGAGGTaGCATCCTTGCAGTCGGTTCTTTGCTGTCAAATCC	+
Preference number: 6 (lower is better) Translates to: FRWLLLHPCSPR*HPCSRFFAVKS Trigger: GGATTTGACAGCAAAGAACCGACTGCAAGGATGCAACCTCGGGCTGCATGGATGGAGCAGGAGCCACCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS CAA 90 bp	TGGATGATCCGGGGCTCCAACGTGCCATGCTTCAAAATCACAGTATaGAAAGTCTGCAGCCAGTGTGAGCCTGCACAATACTGGGTCAGG	+
Preference number: 6 (lower is better) Translates to: WMIRGSNVPCFKITV*KVCSQCEPAQYWVR Trigger: CCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGACTTTCAATACTGTGATTTTGAAGCATGGCACGTTGGAGCCCCGGATCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS CAA 90 bp	ATTCAGGTGGCTCCTGCTCCATCCATGCAGCCCGAGGTTGCATCCTaGCAGTCGGTTCTTTGCTGTCAAATCCCTGATACTGTATGGAGT	+
Preference number: 6 (lower is better) Translates to: IQVAPAPSMQPEVAS*QSVLCCQIPDTVWS Trigger: ACTCCATACAGTATCAGGGATTTGACAGCAAAGAACCGACTGCAAGGATGCAACCTCGGGCTGCATGGATGGAGCAGGAGCCACCTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	AGAGACCGCCGAGGAAGCTCCCATCATTATCCACATTaGAGCCAAACACTTCCTGCAGGGTGTGATATTCCT	+
Preference number: 6 (lower is better) Translates to: RDRRGSSHHYPH*SQTLPAGCDIP Trigger: AGGAATATCACACCCTGCAGGAAGTGTTTGGCTGCAATGTGGATAATGATGGGAGCTTCCTCGGCGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS TCA 72 bp	CTTCAAAATCACAGTATTGAAAGTCTGCAGCCAGTGTaGGCCTGCACAATACTGGGTCAGGTCCAAGGCCAC	+
Preference number: 6 (lower is better) Translates to: LQNHSIESLQPV*ACTILGQVQGH Trigger: GTGGCCTTGGACCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGACTTTCAATACTGTGATTTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	AACGTGCCATGCTTCAAAATCACAGTATTGAAAGTCTaGAGCCAGTGTGAGCCTGCACAATACTGGGTCAGG	+
Preference number: 6 (lower is better) Translates to: NVPCFKITVLKV*SQCEPAQYWVR Trigger: CCTGACCCAGTATTGTGCAGGCTCACACTGGCTGCAGACTTTCAATACTGTGATTTTGAAGCATGGCACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	ATGCAGCCCGAGGTTGCATCCTTGCAGTCGGTTCTTTaGTGTCAAATCCCTGATACTGTATGGAGTCTACAT	+
Preference number: 6 (lower is better) Translates to: MQPEVASLQSVL*CQIPDTVWSLH Trigger: ATGTAGACTCCATACAGTATCAGGGATTTGACAGCAAAGAACCGACTGCAAGGATGCAACCTCGGGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS GCA 72 bp	TACCAGGAAAGTTCCAAGAACCAGGCCGATGAGAATTaGTATGATGGGGATGGTTTGTGGAGGCTCCCATTT	+
Preference number: 6 (lower is better) Translates to: YQESSKNQADEN*YDGDGLWRLPF Trigger: AAATGGGAGCCTCCACAAACCATCCCCATCATAGCAATTCTCATCGGCCTGGTTCTTGGAACTTTCCTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023845.7
CDS TCA 72 bp	GATCATCATGTACCTAAGAAGTCTTTCGTTTGTCAGTaGCAAGCGCAGGACTTGTGCTGTCTCCTTCTCCCA	+
Preference number: 6 (lower is better) Translates to: DHHVPKKSFVCQ*QAQDLCCLLLP Trigger: TGGGAGAAGGAGACAGCACAAGTCCTGCGCTTGTCACTGACAAACGAAAGACTTCTTAGGTACATGATGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023845.7