Pregenerated sensors for H2-KE6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073422Ensembl transcript IDs: ENSMUST00000045467.14, ENSMUST00000114303.4, ENSMUST00000174399.8, ENSMUST00000236627.2, ENSMUST00000237759.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGGCCAGGCAGTGGTaGGGGAGTGAGCAGAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: EPHTAISFVAWELSVLISRARQW*GSEQSP Trigger: CGGACTCTGCTCACTCCCCCACCACTGCCTGGCCCT...GCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGGGCCAGGCAGTGGTaGGGGAGTGAGCAGAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: PEPHTAISFVAWELSVLIRARQW*GSEQSP Trigger: CGGACTCTGCTCACTCCCCCACCACTGCCTGGCCCT...GATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCATATTCAGCATGCCTaGGCCACACACTGCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: REEDLEFIRVTSTPAFHIHIQHA*ATHCHL Trigger: GAGATGGCAGTGTGTGGCTCAGGCATGCTGAATATG...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTGCAGGGAAGAGGATTTaGAATTTATTAGGGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: REEDLEFIRVTSTPAFHIAGKRI*NLLGSQ Trigger: TTGTGACCCTAATAAATTCCAAATCCTCTTCCCTGC...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| 3UTR CCA 72 bp | ATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTaGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: MPEPHTAISFVA*ELSVLISRRAR Trigger: CCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| 3UTR TCA 72 bp | GTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTaGGCCACACACTGCCATCTCTTTTGTAGCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: VTSTPAFHIQHA*ATHCHLFCSLG Trigger: TCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGGCAGGGAAGAGGATTaGGAATTTATTAGGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: FSMPEPHTAISFVAWELSGREED*EFIRVT Trigger: TGTGACCCTAATAAATTCCAAATCCTCTTCCCTGCC...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | CACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGCCTCCAGCAGGCGTCTaGCTGCGGGGCCCTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: HTAISFVAWELSVLISRRPPAGV*LRGPET Trigger: TGTCTCAGGGCCCCGCAGCCAGACGCCTGCTGGAGG...CCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCCTCCAGCAGGCGTCTaGCTGCGGGGCCCTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: SMPEPHTAISFVAWELSVPPAGV*LRGPET Trigger: TGTCTCAGGGCCCCGCAGCCAGACGCCTGCTGGAGG...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAGTGAGCAGAGTCCGGCTTCCATCAGGCAGTTACATGAAAAGACCTCCTGGGCCGCAGTCTGGGTaGGCCCAATCACTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GGVSRVRLPSGSYMKRPPGPQSG*AQSLLL Trigger: AAGCAGGAGTGATTGGGCTCACCCAGACTGCGGCCC...AGGAGGTCTTTTCATGTAACTGCCTGATGGAAGCCGGACTCTGCTCACTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGCCTGGGCTGCAGCCTaGGTGACTAGGAAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: FSMPEPHTAISFVAWELSAWAAA*VTRKVP Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCCCAGGC...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | GTCCGGCTTCCATCAGGCAGTTACATGAAAAGACCTCCTGAGAGGGGCAGAGGCGGACACAACGACAGATaGCGGGCGAGAAAAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VRLPSGSYMKRPPERGRGGHNDR*RARKAG Trigger: GCCTGCTTTTCTCGCCCGCCATCTGTCGTTGTGTCC...GCCTCTGCCCCTCTCAGGAGGTCTTTTCATGTAACTGCCTGATGGAAGCCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | CACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGTCCCGGGCCGCAGTCTaGGTGAGCCCAATCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: HTAISFVAWELSVLISRRSRAAV*VSPITP Trigger: AGGAGTGATTGGGCTCACCCAGACTGCGGCCCGGGA...CCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCTCCCGGGCCGCAGTCTaGGTGAGCCCAATCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SMPEPHTAISFVAWELSVSRAAV*VSPITP Trigger: AGGAGTGATTGGGCTCACCCAGACTGCGGCCCGGGA...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGTGGGAAACTCATCGCGTGTaGTGCCCGCACAGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: SFVAWELSVLISRRARQWETHRV*CPHRTQ Trigger: TTGTGTCCTGTGCGGGCATCACACGCGATGAGTTTC...CCACTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | GGGGGAGTGAGCAGAGTCCGGCTTCCATCAGGCAGTTACATGAAAAGACCTCCTCGAGAAAAGCAGGCCTaGACTTCCTCCAGCAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GGVSRVRLPSGSYMKRPPREKQA*TSSSRR Trigger: ACGCCTGCTGGAGGAAGTGCAGGCCTGCTTTTCTCG...AGGAGGTCTTTTCATGTAACTGCCTGATGGAAGCCGGACTCTGCTCACTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | GGTGGGGATGTAGGCACCCACTTCTGTCCCTGGTCTAAAGAAGGGATGTCTGCTGAAACTCATCGCGTGTaGTGCCCGCACAGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: GGDVGTHFCPWSKEGMSAETHRV*CPHRTQ Trigger: TTGTGTCCTGTGCGGGCATCACACGCGATGAGTTTC...AGCAGACATCCCTTCTTTAGACCAGGGACAGAAGTGGGTGCCTACATCCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | CACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGTCATGGGCGTTGCAATaGACCCTGGGAGGACCGAGT | + |
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Preference number: 4 (lower is better) Translates to: HTAISFVAWELSVLISRRSWALQ*TLGGPS Trigger: ACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGA...CCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCGAGAAAAGCAGGCCTaGACTTCCTCCAGCAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SMPEPHTAISFVAWELSVREKQA*TSSSRR Trigger: ACGCCTGCTGGAGGAAGTGCAGGCCTGCTTTTCTCG...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | GAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCCTGGGTCATGGGCGTTaGAATGAACCCTGGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EPHTAISFVAWELSVLISLGHGR*NEPWED Trigger: GTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAG...GCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | GAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCGGACACAACGACAGATaGCGGGCGAGAAAAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: EPHTAISFVAWELSVLISGHNDR*RARKAG Trigger: GCCTGCTTTTCTCGCCCGCCATCTGTCGTTGTGTCC...GCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | TGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGGGGCCGCAGTCTGGGTaGGCCCAATCACTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: WNLLGSQAPLPSIFSMPEGPQSG*AQSLLL Trigger: AAGCAGGAGTGATTGGGCTCACCCAGACTGCGGCCC...CTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCTCATGGGCGTTGCAATaGACCCTGGGAGGACCGAGT | + |
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Preference number: 4 (lower is better) Translates to: FSMPEPHTAISFVAWELSSWALQ*TLGGPS Trigger: ACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGA...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | GGCAGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATAAGGCCTCATACCACTaGCTTCCACGGAGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GREEDLEFIRVTSTPAFHKASYH*LPRRPL Trigger: CAGGGGCCTCCGTGGAAGTCAGTGGTATGAGGCCTT...ATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCCTGTCCTCCTCCCCATaGAGGCCTCATACCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: FSMPEPHTAISFVAWELSLSSSP*RPHTTD Trigger: GTCAGTGGTATGAGGCCTTCATGGGGAGGAGGACAG...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCGAATGCAACCACATCTaGCACATCCTCAGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SMPEPHTAISFVAWELSVECNHI*HILRVP Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTTGCATTC...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGAATGCAACCACATCTaGCACATCCTCAGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FSMPEPHTAISFVAWELSECNHI*HILRVP Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTTGCATTC...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | TCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGTGGGTCCTTCACTTTCTCTaGCATTTTCTGGGTCATGGG | + |
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Preference number: 4 (lower is better) Translates to: SFVAWELSVLISRRARQWVLHFL*HFLGHG Trigger: CCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGAC...CCACTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGGGGCCGCAGTCTGGGTaGGCCCAATCACTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMGPQSG*AQSLLL Trigger: AAGCAGGAGTGATTGGGCTCACCCAGACTGCGGCCC...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | AATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGCCATCATGGGCGTTGCAATaGACCCTGGGAGGACCGAGT | + |
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Preference number: 4 (lower is better) Translates to: NLLGSQAPLPSIFSMPEPSWALQ*TLGGPS Trigger: ACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGA...TGGCTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGTGGTTCAGATGCCAAGAATaGAACCACATCTGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: SFVAWELSVLISRRARQWFRCQE*NHICHI Trigger: GATGTGGCAGATGTGGTTGCATTCTTGGCATCTGAA...CCACTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | GTCCGGCTTCCATCAGGCAGTTACATGAAAAGACCTCCTGAGAGGGGCAGAGGCTCCACTGTCTTCAGATaGCAAGAATGCAACCACATC | + |
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Preference number: 4 (lower is better) Translates to: VRLPSGSYMKRPPERGRGSTVFR*QECNHI Trigger: GATGTGGTTGCATTCTTGGCATCTGAAGACAGTGGA...GCCTCTGCCCCTCTCAGGAGGTCTTTTCATGTAACTGCCTGATGGAAGCCGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTTCCCGGGCCGCAGTCTaGGTGAGCCCAATCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: REEDLEFIRVTSTPAFHISRAAV*VSPITP Trigger: AGGAGTGATTGGGCTCACCCAGACTGCGGCCCGGGA...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | ATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGGTCCTTCACTTTCTCTaGCATTTTCTGGGTCATGGG | + |
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Preference number: 4 (lower is better) Translates to: ISFVAWELSVLISRRARQVLHFL*HFLGHG Trigger: CCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGAC...CTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCCAGTCTTCTTCTaGCATGTGGAGCAGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: FSMPEPHTAISFVAWELSVPVFF*HVEQKL Trigger: GAGTTTCTGCTCCACATGTCAGAAGAAGACTGGGAC...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | TGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGGAATGCAACCACATCTaGCACATCCTCAGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: WNLLGSQAPLPSIFSMPEECNHI*HILRVP Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTTGCATTC...CTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATCGTTGCAATGAACCCTaGGAGGACCGAGTTACATCG | + |
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Preference number: 4 (lower is better) Translates to: GREEDLEFIRVTSTPAFHRCNEP*EDRVTS Trigger: CGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACG...ATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCTGGGTCATGGGCGTTaGAATGAACCCTGGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMLGHGR*NEPWED Trigger: GTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAG...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCTTCAGATGCCAAGAATaGAACCACATCTGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: PEPHTAISFVAWELSVLIFRCQE*NHICHI Trigger: GATGTGGCAGATGTGGTTGCATTCTTGGCATCTGAA...GATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | CACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGTCCACTGTCTTCAGATaGCAAGAATGCAACCACATC | + |
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Preference number: 4 (lower is better) Translates to: HTAISFVAWELSVLISRRSTVFR*QECNHI Trigger: GATGTGGTTGCATTCTTGGCATCTGAAGACAGTGGA...CCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | TGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGCGTTGCAATGAACCCTaGGAGGACCGAGTTACATCG | + |
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Preference number: 4 (lower is better) Translates to: WNLLGSQAPLPSIFSMPERCNEP*EDRVTS Trigger: CGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACG...CTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCTTCTCTGGCATTTTCTaGGTCATGGGCGTTGCAATG | + |
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Preference number: 4 (lower is better) Translates to: FSMPEPHTAISFVAWELSFSGIF*VMGVAM Trigger: CATTGCAACGCCCATGACCCAGAAAATGCCAGAGAA...GCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | GGCAGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATTCCACTGTCTTCAGATaGCAAGAATGCAACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GREEDLEFIRVTSTPAFHSTVFR*QECNHI Trigger: GATGTGGTTGCATTCTTGGCATCTGAAGACAGTGGA...ATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCGTTGCAATGAACCCTaGGAGGACCGAGTTACATCG | + |
|
Preference number: 4 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMRCNEP*EDRVTS Trigger: CGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACG...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | TGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGTTCTCTGGCATTTTCTaGGTCATGGGCGTTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: WNLLGSQAPLPSIFSMPEFSGIF*VMGVAM Trigger: CATTGCAACGCCCATGACCCAGAAAATGCCAGAGAA...CTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR TCA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGGTCCCAGTCTTCTTCTaGCATGTGGAGCAGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMVPVFF*HVEQKL Trigger: GAGTTTCTGCTCCACATGTCAGAAGAAGACTGGGAC...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGGTCCTTCACTTTCTCTaGCATTTTCTGGGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMVLHFL*HFLGHG Trigger: CCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGAC...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTTCCCAACGGAATCATTaGAGTTACCTTGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: REEDLEFIRVTSTPAFHISQRNH*SYLVLH Trigger: GTGAAGGACAAGGTAACTGCAATGATTCCGTTGGGA...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTTTCAGATGCCAAGAATaGAACCACATCTGCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: REEDLEFIRVTSTPAFHIFRCQE*NHICHI Trigger: GATGTGGCAGATGTGGTTGCATTCTTGGCATCTGAA...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTTCTTCTTCTGACATGTaGAGCAGAAACTCATCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: REEDLEFIRVTSTPAFHISSSDM*SRNSSR Trigger: ACGCGATGAGTTTCTGCTCCACATGTCAGAAGAAGA...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR CCA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGTTTCTCATTACAACCTaGGTTCTGTTTTCCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMFLITT*VLFSCP Trigger: AGGACAGGAAAACAGAACCCAGGTTGTAATGAGAAA...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237759.2 |
||
| CDS TCA 90 bp | GGTCGCAGGCGGCCACGGCGGCGCCCTCTGCCGCTAGGCGCACGCTaGTCGCACGGCCGATGCCGCTACCCGCACCCTGAGAGGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRRPRRRPLPLGAR*SHGRCRYPHPEREP Trigger: GGGTTCCCTCTCAGGGTGCGGGTAGCGGCATCGGCCGTGCGATCAGCGTGCGCCTAGCGGCAGAGGGCGCCGCCGTGGCCGCCTGCGACC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114303.4 |
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| CDS TCA 90 bp | AAGCAGGCCTGCACTTCCTCCAGCAGGCGTCTGGCTGCGGGGCCCTaGGACACATCCGCTTGGAAGGCAGCGTGCTTGCCGCGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQACTSSSRRLAAGP*DTSAWKAACLPRGA Trigger: GGCGCCGCGCGGCAAGCACGCTGCCTTCCAAGCGGATGTGTCTCAGGGCCCCGCAGCCAGACGCCTGCTGGAGGAAGTGCAGGCCTGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGTGGTGGAAGGCAGCGTGCTaGCCGCGCGGCGCCCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFVAWELSVLISRRARQWWKAAC*PRGAPS Trigger: GGACGGGGCGCCGCGCGGCAAGCACGCTGCCTTCCA...CCACTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCTGGAAGGCAGCGTGCTaGCCGCGCGGCGCCCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMPEPHTAISFVAWELSVWKAAC*PRGAPS Trigger: GGACGGGGCGCCGCGCGGCAAGCACGCTGCCTTCCA...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045467.14 ENSMUST00000237759.2 |
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| CDS CCA 90 bp | CAGAAACTCATCGCGTGTGATGCCCGCACAGGACACAACGACAGATaGCGGGCGAGAAAAGCAGGCCTGCACTTCCTCCAGCAGGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QKLIACDARTGHNDR*RARKAGLHFLQQAS Trigger: AGACGCCTGCTGGAGGAAGTGCAGGCCTGCTTTTCTCGCCCGCCATCTGTCGTTGTGTCCTGTGCGGGCATCACACGCGATGAGTTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS TCA 90 bp | TGTCCCAGTCTTCTTCTGACATGTGGAGCAGAAACTCATCGCGTGTaGTGCCCGCACAGGACACAACGACAGATGGCGGGCGAGAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSLLLTCGAETHRV*CPHRTQRQMAGEKS Trigger: GCTTTTCTCGCCCGCCATCTGTCGTTGTGTCCTGTGCGGGCATCACACGCGATGAGTTTCTGCTCCACATGTCAGAAGAAGACTGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS TCA 90 bp | TACATCGGATTCCATGTCGTCCAAGCTCCCGGGCCGCAGTCTGGGTaGGCCCAATCACTCCTGCTTTGGACGACGCATAATTCGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YIGFHVVQAPGPQSG*AQSLLLWTTHNSFV Trigger: GACAAACGAATTATGCGTCGTCCAAAGCAGGAGTGATTGGGCTCACCCAGACTGCGGCCCGGGAGCTTGGACGACATGGAATCCGATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS GCA 90 bp | ACTGACTTCCACGGAGGCCCCTGTGATGTATCCACTGTCTTCAGATaGCAAGAATGCAACCACATCTGCCACATCCTCAGGGTCCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TDFHGGPCDVSTVFR*QECNHICHILRVPH Trigger: ATGGGGGACCCTGAGGATGTGGCAGATGTGGTTGCATTCTTGGCATCTGAAGACAGTGGATACATCACAGGGGCCTCCGTGGAAGTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CCA 90 bp | CACTTTCTCTGGCATTTTCTGGGTCATGGGCGTTGCAATGAACCCTaGGAGGACCGAGTTACATCGGATTCCATGTCGTCCAAGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HFLWHFLGHGRCNEP*EDRVTSDSMSSKLP Trigger: CGGGAGCTTGGACGACATGGAATCCGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCAGAGAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGTGGACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT | + |
|
Preference number: 5 (lower is better) Translates to: SFVAWELSVLISRRARQWTRKVP*RLTAMT Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...CCACTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCAAGGTGCCCTTGAGGTaGACAGCTATGACTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMPEPHTAISFVAWELSVKVPLR*TAMTLS Trigger: GGACAGAGTCATAGCTGTCAACCTCAAGGGCACCTT...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | GAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT | + |
|
Preference number: 5 (lower is better) Translates to: EPHTAISFVAWELSVLISTRKVP*RLTAMT Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...GCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS TCA 90 bp | TGTCCTTCACTTTCTCTGGCATTTTCTGGGTCATGGGCGTTGCAATaGACCCTGGGAGGACCGAGTTACATCGGATTCCATGTCGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CPSLSLAFSGSWALQ*TLGGPSYIGFHVVQ Trigger: TTGGACGACATGGAATCCGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS GCA 90 bp | TACCTTGTCCTTCACTTTCTCTGGCATTTTCTGGGTCATGGGCGTTaGAATGAACCCTGGGAGGACCGAGTTACATCGGATTCCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YLVLHFLWHFLGHGR*NEPWEDRVTSDSMS Trigger: CGACATGGAATCCGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGACAAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CCA 90 bp | GTGTCCCAACGGAATCATTGCAGTTACCTTGTCCTTCACTTTCTCTaGCATTTTCTGGGTCATGGGCGTTGCAATGAACCCTGGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSQRNHCSYLVLHFL*HFLGHGRCNEPWED Trigger: GTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGACAAGGTAACTGCAATGATTCCGTTGGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGCATGCCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCATGATGCTACTAATGTaGATGATGGAGCCACGACCG | + |
|
Preference number: 5 (lower is better) Translates to: SMPEPHTAISFVAWELSVMMLLM*MMEPRP Trigger: CGGTCGTGGCTCCATCATCAACATTAGTAGCATCAT...GACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGGCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | ATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCAGGAGGGCCAGGCAGATCATTGCAGTTACCTaGTCCTTCACTTTCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISFVAWELSVLISRRARQIIAVT*SFTFSG Trigger: GCCAGAGAAAGTGAAGGACAAGGTAACTGCAATGAT...CTGCCTGGCCCTCCTGCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | CCTGAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCGTCCCAACGGAATCATaGCAGTTACCTTGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEPHTAISFVAWELSVLIVPTES*QLPCPS Trigger: TGAAGGACAAGGTAACTGCAATGATTCCGTTGGGAC...GATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | GAGCCACACACTGCCATCTCTTTTGTAGCCTGGGAACTTAGCGTCCTCATCAGCGTCCCAACGGAATCATaGCAGTTACCTTGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EPHTAISFVAWELSVLISVPTES*QLPCPS Trigger: TGAAGGACAAGGTAACTGCAATGATTCCGTTGGGAC...GCTGATGAGGACGCTAAGTTCCCAGGCTACAAAAGAGATGGCAGTGTGTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | TGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGAAGGTGCCCTTGAGGTaGACAGCTATGACTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WNLLGSQAPLPSIFSMPEKVPLR*TAMTLS Trigger: GGACAGAGTCATAGCTGTCAACCTCAAGGGCACCTT...CTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATGATGCTACTAATGTaGATGATGGAGCCACGACCG | + |
|
Preference number: 5 (lower is better) Translates to: GREEDLEFIRVTSTPAFHMMLLM*MMEPRP Trigger: CGGTCGTGGCTCCATCATCAACATTAGTAGCATCAT...ATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTAAGGTGCCCTTGAGGTaGACAGCTATGACTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: REEDLEFIRVTSTPAFHIKVPLR*TAMTLS Trigger: GGACAGAGTCATAGCTGTCAACCTCAAGGGCACCTT...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | TGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGCCTGAGATGATGCTACTAATGTaGATGATGGAGCCACGACCG | + |
|
Preference number: 5 (lower is better) Translates to: WNLLGSQAPLPSIFSMPEMMLLM*MMEPRP Trigger: CGGTCGTGGCTCCATCATCAACATTAGTAGCATCAT...CTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT | + |
|
Preference number: 5 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMTRKVP*RLTAMT Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGAGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTATCATTGCAGTTACCTaGTCCTTCACTTTCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: REEDLEFIRVTSTPAFHIIIAVT*SFTFSG Trigger: GCCAGAGAAAGTGAAGGACAAGGTAACTGCAATGAT...AATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS-3UTR CAA 90 bp | AGGATTTGGAATTTATTAGGGTCACAAGCACCCCTGCCTTCCATATTCAGCATGATCATTGCAGTTACCTaGTCCTTCACTTTCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIWNLLGSQAPLPSIFSMIIAVT*SFTFSG Trigger: GCCAGAGAAAGTGAAGGACAAGGTAACTGCAATGAT...CATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAATAAATTCCAAATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS GCA 72 bp | GCTCCCCGGGCTTCCCAGCAGCCGCACCGTGTCCTGTaGCGCGGCCCCGTCCAGGTCGCAGGCGGCCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: APRASQQPHRVL*RGPVQVAGGHG Trigger: GCCGTGGCCGCCTGCGACCTGGACGGGGCCGCGGCACAGGACACGGTGCGGCTGCTGGGAAGCCCGGGGAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS TCA 72 bp | CGGCCACGGCGGCGCCCTCTGCCGCTAGGCGCACGCTaGTCGCACGGCCGATGCCGCTACCCGCACCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPRRRPLPLGAR*SHGRCRYPHPE Trigger: CTCAGGGTGCGGGTAGCGGCATCGGCCGTGCGATCAGCGTGCGCCTAGCGGCAGAGGGCGCCGCCGTGGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114303.4 |
||
| CDS TCA 72 bp | GCCGATGCCGCTACCCGCACCCTGAGAGGGAACCCCTaGACCTGTGACCAGGGCCAGCGCAGAGCGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ADAATRTLRGNP*TCDQGQRRAEP Trigger: CGGCTCCGCTCTGCGCTGGCCCTGGTCACAGGTTCAGGGGTTCCCTCTCAGGGTGCGGGTAGCGGCATCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114303.4 |
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| CDS TCA 72 bp | CGCTACCCGCACCCTGAGAGGGAACCCCTGAACCTGTaGCCAGGGCCAGCGCAGAGCGGAGCCGGAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RYPHPEREPLNL*PGPAQSGAGAE Trigger: CTCAGCTCCGGCTCCGCTCTGCGCTGGCCCTGGTCACAGGTTCAGGGGTTCCCTCTCAGGGTGCGGGTAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114303.4 |
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| CDS TCA 72 bp | TGCACTTCCTCCAGCAGGCGTCTGGCTGCGGGGCCCTaGGACACATCCGCTTGGAAGGCAGCGTGCTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CTSSSRRLAAGP*DTSAWKAACLP Trigger: CGGCAAGCACGCTGCCTTCCAAGCGGATGTGTCTCAGGGCCCCGCAGCCAGACGCCTGCTGGAGGAAGTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS GCA 72 bp | GACACAACGACAGATGGCGGGCGAGAAAAGCAGGCCTaGACTTCCTCCAGCAGGCGTCTGGCTGCGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: DTTTDGGREKQA*TSSSRRLAAGP Trigger: GGGCCCCGCAGCCAGACGCCTGCTGGAGGAAGTGCAGGCCTGCTTTTCTCGCCCGCCATCTGTCGTTGTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
||
| CDS GCA 72 bp | AAAGCAGGCCTGCACTTCCTCCAGCAGGCGTCTGGCTaGGGGGCCCTGAGACACATCCGCTTGGAAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAGLHFLQQASG*GALRHIRLEGS Trigger: GCTGCCTTCCAAGCGGATGTGTCTCAGGGCCCCGCAGCCAGACGCCTGCTGGAGGAAGTGCAGGCCTGCTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS CCA 72 bp | GAGAAAAGCAGGCCTGCACTTCCTCCAGCAGGCGTCTaGCTGCGGGGCCCTGAGACACATCCGCTTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: EKSRPALPPAGV*LRGPETHPLGR Trigger: CCTTCCAAGCGGATGTGTCTCAGGGCCCCGCAGCCAGACGCCTGCTGGAGGAAGTGCAGGCCTGCTTTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS CCA 72 bp | CGGATTCCATGTCGTCCAAGCTCCCGGGCCGCAGTCTaGGTGAGCCCAATCACTCCTGCTTTGGACGACGCA | + |
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Preference number: 6 (lower is better) Translates to: RIPCRPSSRAAV*VSPITPALDDA Trigger: TGCGTCGTCCAAAGCAGGAGTGATTGGGCTCACCCAGACTGCGGCCCGGGAGCTTGGACGACATGGAATCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CCA 72 bp | ATCGCGTGTGATGCCCGCACAGGACACAACGACAGATaGCGGGCGAGAAAAGCAGGCCTGCACTTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IACDARTGHNDR*RARKAGLHFLQ Trigger: CTGGAGGAAGTGCAGGCCTGCTTTTCTCGCCCGCCATCTGTCGTTGTGTCCTGTGCGGGCATCACACGCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS TCA 72 bp | CGACCGCCACTGGACACTAAAGCCTGGGCTGCAGCCTaGGTGACTAGGAAGGTGCCCTTGAGGTTGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: RPPLDTKAWAAA*VTRKVPLRLTA Trigger: AGCTGTCAACCTCAAGGGCACCTTCCTAGTCACTCAGGCTGCAGCCCAGGCTTTAGTGTCCAGTGGCGGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS TCA 72 bp | TTCCATGTCGTCCAAGCTCCCGGGCCGCAGTCTGGGTaGGCCCAATCACTCCTGCTTTGGACGACGCATAAT | + |
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Preference number: 6 (lower is better) Translates to: FHVVQAPGPQSG*AQSLLLWTTHN Trigger: ATTATGCGTCGTCCAAAGCAGGAGTGATTGGGCTCACCCAGACTGCGGCCCGGGAGCTTGGACGACATGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS TCA 72 bp | CTTCTTCTGACATGTGGAGCAGAAACTCATCGCGTGTaGTGCCCGCACAGGACACAACGACAGATGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLTCGAETHRV*CPHRTQRQMAG Trigger: GCCCGCCATCTGTCGTTGTGTCCTGTGCGGGCATCACACGCGATGAGTTTCTGCTCCACATGTCAGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS GCA 72 bp | CACGGAGGCCCCTGTGATGTATCCACTGTCTTCAGATaGCAAGAATGCAACCACATCTGCCACATCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: HGGPCDVSTVFR*QECNHICHILR Trigger: CCTGAGGATGTGGCAGATGTGGTTGCATTCTTGGCATCTGAAGACAGTGGATACATCACAGGGGCCTCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CCA 72 bp | TGGCATTTTCTGGGTCATGGGCGTTGCAATGAACCCTaGGAGGACCGAGTTACATCGGATTCCATGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: WHFLGHGRCNEP*EDRVTSDSMSS Trigger: GGACGACATGGAATCCGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CCA 72 bp | ACAGCTATGACTCTGTCCCAGTCTTCTTCTGACATGTaGAGCAGAAACTCATCGCGTGTGATGCCCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: TAMTLSQSSSDM*SRNSSRVMPAQ Trigger: CTGTGCGGGCATCACACGCGATGAGTTTCTGCTCCACATGTCAGAAGAAGACTGGGACAGAGTCATAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000237759.2 |
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| CDS CAA 90 bp | TCCTCAGGGTCCCCCATGTGTCCCAACGGAATCATTGCAGTTACCTaGTCCTTCACTTTCTCTGGCATTTTCTGGGTCATGGGCGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSGSPMCPNGIIAVT*SFTFSGIFWVMGVA Trigger: TGCAACGCCCATGACCCAGAAAATGCCAGAGAAAGTGAAGGACAAGGTAACTGCAATGATTCCGTTGGGACACATGGGGGACCCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000045467.14 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS TCA 72 bp | CTTTCTCTGGCATTTTCTGGGTCATGGGCGTTGCAATaGACCCTGGGAGGACCGAGTTACATCGGATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSLAFSGSWALQ*TLGGPSYIGFH Trigger: ATGGAATCCGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCAGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS GCA 72 bp | CTTCACTTTCTCTGGCATTTTCTGGGTCATGGGCGTTaGAATGAACCCTGGGAGGACCGAGTTACATCGGAT | + |
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Preference number: 6 (lower is better) Translates to: LHFLWHFLGHGR*NEPWEDRVTSD Trigger: ATCCGATGTAACTCGGTCCTCCCAGGGTTCATTGCAACGCCCATGACCCAGAAAATGCCAGAGAAAGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CAA 72 bp | TCCCCCATGTGTCCCAACGGAATCATTGCAGTTACCTaGTCCTTCACTTTCTCTGGCATTTTCTGGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: SPMCPNGIIAVT*SFTFSGIFWVM Trigger: CATGACCCAGAAAATGCCAGAGAAAGTGAAGGACAAGGTAACTGCAATGATTCCGTTGGGACACATGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CAA 90 bp | CTGGGTGAGCCCAATCACTCCTGCTTTGGACGACGCATAATTCGTTaGTCCGATATTCCCCACCTTTCCAATGATGCTACTAATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LGEPNHSCFGRRIIR*SDIPHLSNDATNVD Trigger: ATCAACATTAGTAGCATCATTGGAAAGGTGGGGAATATCGGACAAACGAATTATGCGTCGTCCAAAGCAGGAGTGATTGGGCTCACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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| CDS CAA 72 bp | CCCAATCACTCCTGCTTTGGACGACGCATAATTCGTTaGTCCGATATTCCCCACCTTTCCAATGATGCTACT | + |
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Preference number: 6 (lower is better) Translates to: PNHSCFGRRIIR*SDIPHLSNDAT Trigger: AGTAGCATCATTGGAAAGGTGGGGAATATCGGACAAACGAATTATGCGTCGTCCAAAGCAGGAGTGATTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045467.14 ENSMUST00000114303.4 ENSMUST00000174399.8 ENSMUST00000236627.2 ENSMUST00000237759.2 |
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