Pregenerated sensors for H2-K1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061232Ensembl transcript IDs: ENSMUST00000025181.18, ENSMUST00000087189.7, ENSMUST00000172912.8, ENSMUST00000173075.3, ENSMUST00000235463.2, ENSMUST00000236469.2, ENSMUST00000236740.2, ENSMUST00000238098.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGACAGGGTCCTaGTGTAGAGGGGTGGACTGGGCTCCACAGTTCTTCACATTGAGT | + |
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Preference number: 1 (lower is better) Translates to: GWLWKGRQSSAGTGS*CRGVDWAPQFFTLS Trigger: ACTCAATGTGAAGAACTGTGGAGCCCAGTCCACCCCTCTACACCAGGACCCTGTCCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR CCA 90 bp | GACAGGCTACAGATGTCCCTCAGTGTTTGGCTGAACCAGCAAGGTTaGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGACAGGGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: DRLQMSLSVWLNQQG*LWKGRQSSAGTGSW Trigger: CCAGGACCCTGTCCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAACACTGAGGGACATCTGTAGCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR TCA 90 bp | TCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTAGCATGGAGCTaGCAGGCTACAGATGTCCCTCAGTGTTTGGCTGAACCAGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SQCGSEELQVRVAWS*QATDVPQCLAEPAR Trigger: CCTTGCTGGTTCAGCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGCAACTCCTCACTTCCACACTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR TCA 90 bp | GTTCTTCACATTGAGTCCATAGGCTCACAGGGAACATCAGACACTTaGCTAAAGAGAACTGAGGGCTCTGGATGTCACAGGAGATATGAG | + |
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Preference number: 1 (lower is better) Translates to: VLHIESIGSQGTSDT*LKRTEGSGCHRRYE Trigger: CTCATATCTCCTGTGACATCCAGAGCCCTCAGTTCTCTTTAGTCAAGTGTCTGATGTTCCCTGTGAGCCTATGGACTCAATGTGAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR TCA 90 bp | ATAACAATCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTaGGGAGTTGCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGA | + |
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Preference number: 1 (lower is better) Translates to: ITIKVTFKLLFSVWK*GVAGQGSMELTGYR Trigger: TCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGATTGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCTTGACTAAAGAGAACTaGGGGCTCTGGATGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: AGQGSMELTGYRCPSVFGLTKEN*GLWMSQ Trigger: CTGTGACATCCAGAGCCCTCAGTTCTCTTTAGTCAA...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGGGAACATCAGACACTTaGCTAAAGAGAACTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGGTSDT*LKRTEG Trigger: GCCCTCAGTTCTCTTTAGTCAAGTGTCTGATGTTCC...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGATGTCACAGGAGATATaGGAAGACATTGTCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGMSQEI*EDIVCH Trigger: GTGACAGACAATGTCTTCTCATATCTCCTGTGACAT...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCATGTCACAGGAGATATaGGAAGACATTGTCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: AGQGSMELTGYRCPSVFGMSQEI*EDIVCH Trigger: GTGACAGACAATGTCTTCTCATATCTCCTGTGACAT...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGGGGAAGACAGAGCAGTaGAGGGACAGGGTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GYIQIIILSVEVRSCRSGGKTEQ*RDRVLV Trigger: CACCAGGACCCTGTCCCTGCACTGCTCTGTCTTCCC...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGCCTGGTGTAGAGGGGTaGACTGGGCTCCACAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GYIQIIILSVEVRSCRSGPGVEG*TGLHSS Trigger: AGAACTGTGGAGCCCAGTCCACCCCTCTACACCAGG...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCGCAGGGACAGGGTCCTaGTGTAGAGGGGTGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SRLHSNYYSQCGSEELQVAGTGS*CRGVDW Trigger: CCAGTCCACCCCTCTACACCAGGACCCTGTCCCTGC...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR GCA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTAGGGAAGACAGAGCAGTaGAGGGACAGGGTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LHSNYYSQCGSEELQVRVGKTEQ*RDRVLV Trigger: CACCAGGACCCTGTCCCTGCACTGCTCTGTCTTCCC...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCCCTGGTGTAGAGGGGTaGACTGGGCTCCACAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SRLHSNYYSQCGSEELQVPGVEG*TGLHSS Trigger: AGAACTGTGGAGCCCAGTCCACCCCTCTACACCAGG...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTACCTGGTGTAGAGGGGTaGACTGGGCTCCACAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LHSNYYSQCGSEELQVRVPGVEG*TGLHSS Trigger: AGAACTGTGGAGCCCAGTCCACCCCTCTACACCAGG...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGCTGAACCAGCAAGGTTaGCTGTGGAAGGGAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GYIQIIILSVEVRSCRSGLNQQG*LWKGRQ Trigger: CTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAG...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTTGACTAAAGAGAACTaGGGGCTCTGGATGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: GYIQIIILSVEVRSCRSGLTKEN*GLWMSQ Trigger: CTGTGACATCCAGAGCCCTCAGTTCTCTTTAGTCAA...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCCAGCAAGGTTGGCTGTaGAAGGGAAGACAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SRLHSNYYSQCGSEELQVQQGWL*KGRQSS Trigger: ACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTG...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCATGTCCCTCAGTGTTTaGCTGAACCAGCAAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: SRLHSNYYSQCGSEELQVMSLSV*LNQQGW Trigger: CCAACCTTGCTGGTTCAGCCAAACACTGAGGGACAT...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR CCA 72 bp | TGGAAGGGAAGACAGAGCAGTGCAGGGACAGGGTCCTaGTGTAGAGGGGTGGACTGGGCTCCACAGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: WKGRQSSAGTGS*CRGVDWAPQFF Trigger: GAAGAACTGTGGAGCCCAGTCCACCCCTCTACACCAGGACCCTGTCCCTGCACTGCTCTGTCTTCCCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR TCA 72 bp | GAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCTaGACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: ELTGYRCPSVFG*TSKVGCGREDR Trigger: TCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR CCA 72 bp | CATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTaGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: HGADRLQMSLSV*LNQQGWLWKGR Trigger: TCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGAGATATGAGAAGACATaGTCTGTCACCAAGTCCACT | + |
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Preference number: 3 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGRYEKT*SVTKST Trigger: AGTGGACTTGGTGACAGACAATGTCTTCTCATATCT...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR TCA 72 bp | ATTGAGTCCATAGGCTCACAGGGAACATCAGACACTTaGCTAAAGAGAACTGAGGGCTCTGGATGTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: IESIGSQGTSDT*LKRTEGSGCHR Trigger: CCTGTGACATCCAGAGCCCTCAGTTCTCTTTAGTCAAGTGTCTGATGTTCCCTGTGAGCCTATGGACTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGGCTGAACCAGCAAGGTaGGCTGTGGAAGGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: GYIQIIILSVEVRSCRSGAEPAR*AVEGKT Trigger: TGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGC...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCGCTGAACCAGCAAGGTaGGCTGTGGAAGGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: SRLHSNYYSQCGSEELQVAEPAR*AVEGKT Trigger: TGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGC...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR-3UTR CAA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTAGCTGAACCAGCAAGGTaGGCTGTGGAAGGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: LHSNYYSQCGSEELQVRVAEPAR*AVEGKT Trigger: TGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGC...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| 3UTR TCA 72 bp | AAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTaGGGAGTTGCAGGTCAGGGTAGCATGGAGCTGACA | + |
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Preference number: 3 (lower is better) Translates to: KVTFKLLFSVWK*GVAGQGSMELT Trigger: TGTCAGCTCCATGCTACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCTACTCGGGCCCCTCCTaGTCCATCCACCGCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGYSGPS*SIHRAR Trigger: GCGGGCGCGGTGGATGGAGCAGGAGGGGCCCGAGTA...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCGGCCCTGAGTCTCTCTaGTTCACCAGCCTGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGGPESL*FTSLLP Trigger: TGGGAGCAGGCTGGTGAAGCAGAGAGACTCAGGGCC...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCAGAGGTCTGGGAGCCTaGAGCCAGAGCATAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGRGLGA*SQSIVP Trigger: GGGGACTATGCTCTGGCTCCAGGCTCCCAGACCTCT...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCGACAGATCAGAGGTCTaGGAGCCTGGAGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGDRSEV*EPGARA Trigger: TGCTCTGGCTCCAGGCTCCCAGACCTCTGATCTGTC...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 |
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| CDS-3UTR TCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGCCCAGCACCTCAGGGTaGCTTTATCTTCAGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGPSTSG*LYLQVC Trigger: GCAGACCTGAAGATAAAGTCACCCTGAGGTGCTGGG...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCCCCAGCACCTCAGGGTaGCTTTATCTTCAGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGPSTSG*LYLQVC Trigger: GCAGACCTGAAGATAAAGTCACCCTGAGGTGCTGGG...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCCCACCACAGCTCCAGTaGCTATTGCAGCTCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGPPQLQ*LLQLQG Trigger: TCCTTGGAGCTGCAATAGTCACTGGAGCTGTGGTGG...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGCAACGGTCGCCATGTTaGAGACAGTGGATGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGQRSPC*RQWMEE Trigger: CTCCTCCATCCACTGTCTCCAACATGGCGACCGTTG...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGTCTGCTTCACCAGCCTaGTCCCACTTGTGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGSASPA*SHLCLV Trigger: CACCAAACACAAGTGGGAGCAGGCTGGTGAAGCAGA...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCTCTGCTTCACCAGCCTaGTCCCACTTGTGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGSASPA*SHLCLV Trigger: CACCAAACACAAGTGGGAGCAGGCTGGTGAAGCAGA...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGTCCTCCCCATTCAACTaGCAGGTCAGGGTGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGSSPFN*QVRVMS Trigger: TGACATCACCCTGACCTGGCAGTTGAATGGGGAGGA...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR TCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCCCTCCAGGTAGGCCCTaGGTCTCTCTGCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSPPGRP*VSLLHQ Trigger: CTGGTGAAGCAGAGAGACTCAGGGCCTACCTGGAGG...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR GCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTACTCGGGCCCCTCCTaGTCCATCCACCGCGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GYIQIIILSVEVRSCRSGYSGPS*SIHRAR Trigger: GCGGGCGCGGTGGATGGAGCAGGAGGGGCCCGAGTA...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCTCCACTCGGAAACTCTaGTCATTGCCCTTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGSTRKL*SLPLAF Trigger: GAAAGCCAAGGGCAATGAGCAGAGTTTCCGAGTGGA...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCGGCCCTGAGTCTCTCTaGTTCACCAGCCTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSGPESL*FTSLLP Trigger: TGGGAGCAGGCTGGTGAAGCAGAGAGACTCAGGGCC...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGGACAGATCAGAGGTCTaGGAGCCTGTGTTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGDRSEV*EPVFLL Trigger: AAGGAGAAACACAGGCTCCCAGACCTCTGATCTGTC...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236469.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGCCTCCAGGTAGGCCCTaGGTCTCTCTGCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEGSGCHRRYEKTLSVTKPPGRP*VSLLHQ Trigger: CTGGTGAAGCAGAGAGACTCAGGGCCTACCTGGAGG...CTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCGGAAACTCTGCTCATTaGCCTTGGCTTTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQGSMELTGYRCPSVFGGNSAH*PWLSVS Trigger: AGACACAGAAAGCCAAGGGCAATGAGCAGAGTTTCC...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCAAGAGGTCTGGGAGCCTaGAGCCAGAGCATAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPRGLGA*SQSIVP Trigger: GGGGACTATGCTCTGGCTCCAGGCTCCCAGACCTCT...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCGACAGATCAGAGGTCTaGGAGCCTGGAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSDRSEV*EPGARA Trigger: TGCTCTGGCTCCAGGCTCCCAGACCTCTGATCTGTC...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCCCACCACAGCTCCAGTaGCTATTGCAGCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSPPQLQ*LLQLQG Trigger: TCCTTGGAGCTGCAATAGTCACTGGAGCTGTGGTGG...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236469.2 ENSMUST00000236740.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCCAACGGTCGCCATGTTaGAGACAGTGGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSQRSPC*RQWMEE Trigger: CTCCTCCATCCACTGTCTCCAACATGGCGACCGTTG...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236469.2 ENSMUST00000236740.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCAGACAGATCAGAGGTCTaGGAGCCTGGAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPDRSEV*EPGARA Trigger: TGCTCTGGCTCCAGGCTCCCAGACCTCTGATCTGTC...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGTCACGCTTTACAATCTaGGAGAGACAGATCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGSRFTI*ERQIRG Trigger: ACCTCTGATCTGTCTCTCCCAGATTGTAAAGCGTGA...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172912.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCTCTTCAGGTCTGCTGTaGTGGGTCACATGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSSSGLL*WVTWAF Trigger: AAAGGCCCATGTGACCCATCACAGCAGACCTGAAGA...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236740.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCACCCAGCACCTCAGGGTaGCTTTATCTTCAGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPPSTSG*LYLQVC Trigger: GCAGACCTGAAGATAAAGTCACCCTGAGGTGCTGGG...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236740.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGCCACCACAGCTCCAGTaGCTATTGCAGCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEGSGCHRRYEKTLSVTKPPQLQ*LLQLQG Trigger: TCCTTGGAGCTGCAATAGTCACTGGAGCTGTGGTGG...CTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCTCCTCCCCATTCAACTaGCAGGTCAGGGTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSSSPFN*QVRVMS Trigger: TGACATCACCCTGACCTGGCAGTTGAATGGGGAGGA...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCACAACGGTCGCCATGTTaGAGACAGTGGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPQRSPC*RQWMEE Trigger: CTCCTCCATCCACTGTCTCCAACATGGCGACCGTTG...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGCAACGGTCGCCATGTTaGAGACAGTGGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEGSGCHRRYEKTLSVTKQRSPC*RQWMEE Trigger: CTCCTCCATCCACTGTCTCCAACATGGCGACCGTTG...CTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGCATCACTTTACAATCTaGGAGAGACAGATCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGHHFTI*ERQIRG Trigger: ACCTCTGATCTGTCTCTCCCAGATTGTAAAGTGATG...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025181.18 ENSMUST00000236469.2 |
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| CDS-3UTR TCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCATCTTCAGGTCTGCTGTaGTGGGTCACATGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPSSGLL*WVTWAF Trigger: AAAGGCCCATGTGACCCATCACAGCAGACCTGAAGA...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCATCCTCCCCATTCAACTaGCAGGTCAGGGTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPSSPFN*QVRVMS Trigger: TGACATCACCCTGACCTGGCAGTTGAATGGGGAGGA...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGAGAGGTCTGGGAGCCTaGAGCCAGAGCATAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GYIQIIILSVEVRSCRSGRGLGA*SQSIVP Trigger: GGGGACTATGCTCTGGCTCCAGGCTCCCAGACCTCT...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 |
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| CDS-3UTR TCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGCCACCACAGCTCCAGTaGCTATTGCAGCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYIQIIILSVEVRSCRSGPPQLQ*LLQLQG Trigger: TCCTTGGAGCTGCAATAGTCACTGGAGCTGTGGTGG...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGGGAAACTCTGCTCATTaGCCTTGGCTTTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEGSGCHRRYEKTLSVTKGNSAH*PWLSVS Trigger: AGACACAGAAAGCCAAGGGCAATGAGCAGAGTTTCC...CTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCAGGAAACTCTGCTCATTaGCCTTGGCTTTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RALDVTGDMRRHCLSPSPGNSAH*PWLSVS Trigger: AGACACAGAAAGCCAAGGGCAATGAGCAGAGTTTCC...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR TCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTCTTCAGGTCTGCTGTaGTGGGTCACATGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYIQIIILSVEVRSCRSGSSGLL*WVTWAF Trigger: AAAGGCCCATGTGACCCATCACAGCAGACCTGAAGA...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTCTGCTTCACCAGCCTaGTCCCACTTGTGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYIQIIILSVEVRSCRSGSASPA*SHLCLV Trigger: CACCAAACACAAGTGGGAGCAGGCTGGTGAAGCAGA...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCCATCACTTTACAATCTaGGAGAGACAGATCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSGCHRRYEKTLSVTKSHHFTI*ERQIRG Trigger: ACCTCTGATCTGTCTCTCCCAGATTGTAAAGTGATG...GGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000235463.2 ENSMUST00000236469.2 |
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| CDS-3UTR TCA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCCCACCACAGCTCCAGTaGCTATTGCAGCTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLHSNYYSQCGSEELQVPPQLQ*LLQLQG Trigger: TCCTTGGAGCTGCAATAGTCACTGGAGCTGTGGTGG...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CCA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTACAACGGTCGCCATGTTaGAGACAGTGGATGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSNYYSQCGSEELQVRVQRSPC*RQWMEE Trigger: CTCCTCCATCCACTGTCTCCAACATGGCGACCGTTG...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTATCCTCCCCATTCAACTaGCAGGTCAGGGTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSNYYSQCGSEELQVRVSSPFN*QVRVMS Trigger: TGACATCACCCTGACCTGGCAGTTGAATGGGGAGGA...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR GCA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTATCCACTCGGAAACTCTaGTCATTGCCCTTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHSNYYSQCGSEELQVRVSTRKL*SLPLAF Trigger: GAAAGCCAAGGGCAATGAGCAGAGTTTCCGAGTGGA...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCTCCACTCGGAAACTCTaGTCATTGCCCTTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRLHSNYYSQCGSEELQVSTRKL*SLPLAF Trigger: GAAAGCCAAGGGCAATGAGCAGAGTTTCCGAGTGGA...GACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS TCA 90 bp | ACGGCGGTGACGAAATACCTCAGCGAGTGTGGGCCCGCGCGGGTCTaGGTCGGAGCCAGGGCGGCCGCCAACAGCAGGAGCAGCGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAVTKYLSECGPARV*VGARAAANSRSSVH Trigger: GTGCACGCTGCTCCTGCTGTTGGCGGCCGCCCTGGCTCCGACTCAGACCCGCGCGGGCCCACACTCGCTGAGGTATTTCGTCACCGCCGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 ENSMUST00000238098.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGGCTGAACCAGCAAGGTTGGCTGTGGAAGGGAAGACAGAGCAGTGCAGGGTGCTCCCACTTGTGTTaGGTGATCAGCGCCGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VWLNQQGWLWKGRQSSAGCSHLC*VISAAM Trigger: CATGGCGGCGCTGATCACCAAACACAAGTGGGAGCA...CCCTGCACTGCTCTGTCTTCCCTTCCACAGCCAACCTTGCTGGTTCAGCCAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCGCAACGGTCGCCATGTaGGAGACAGTGGATGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGQGSMELTGYRCPSVFGATVAM*ETVDGG Trigger: TCCTCCATCCACTGTCTCCAACATGGCGACCGTTGC...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCAGGGTAGCATGGAGCTGACAGGCTACAGATGTCCCTCAGTGTTTGGCCGGAAACTCTGCTCATaGCCCTTGGCTTTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGQGSMELTGYRCPSVFGRKLCS*PLAFCV Trigger: GACACAGAAAGCCAAGGGCAATGAGCAGAGTTTCCG...GCCAAACACTGAGGGACATCTGTAGCCTGTCAGCTCCATGCTACCCTGACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCACCAGCCTGCTCCCACTaGTGTTTGGTGATCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RALDVTGDMRRHCLSPSPPACSH*CLVISA Trigger: GGCGCTGATCACCAAACACAAGTGGGAGCAGGCTGG...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGCCAGCCTGCTCCCACTaGTGTTTGGTGATCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEGSGCHRRYEKTLSVTKPACSH*CLVISA Trigger: GGCGCTGATCACCAAACACAAGTGGGAGCAGGCTGG...CTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGCTCTGCTCATTGCCCTaGGCTTTCTGTGTCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: TEGSGCHRRYEKTLSVTKLCSLP*AFCVSR Trigger: GCGGGAGACACAGAAAGCCAAGGGCAATGAGCAGAG...CTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCATGCTCCCACTTGTGTTaGGTGATCAGCGCCGCCATG | + |
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Preference number: 5 (lower is better) Translates to: RALDVTGDMRRHCLSPSPCSHLC*VISAAM Trigger: CATGGCGGCGCTGATCACCAAACACAAGTGGGAGCA...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | AGGGCTCTGGATGTCACAGGAGATATGAGAAGACATTGTCTGTCACCAAGTCCAGCAACGGTCGCCATGTaGGAGACAGTGGATGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RALDVTGDMRRHCLSPSPATVAM*ETVDGG Trigger: TCCTCCATCCACTGTCTCCAACATGGCGACCGTTGC...TGGACTTGGTGACAGACAATGTCTTCTCATATCTCCTGTGACATCCAGAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000235463.2 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGCCAGCCTGCTCCCACTaGTGTTTGGTGATCAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: GYIQIIILSVEVRSCRSGPACSH*CLVISA Trigger: GGCGCTGATCACCAAACACAAGTGGGAGCAGGCTGG...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGCTCTGCTCATTGCCCTaGGCTTTCTGTGTCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: GYIQIIILSVEVRSCRSGLCSLP*AFCVSR Trigger: GCGGGAGACACAGAAAGCCAAGGGCAATGAGCAGAG...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTACTCTGCTCATTGCCCTaGGCTTTCTGTGTCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: LHSNYYSQCGSEELQVRVLCSLP*AFCVSR Trigger: GCGGGAGACACAGAAAGCCAAGGGCAATGAGCAGAG...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | GGTTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGCGGAAACTCTGCTCATaGCCCTTGGCTTTCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: GYIQIIILSVEVRSCRSGRKLCS*PLAFCV Trigger: GACACAGAAAGCCAAGGGCAATGAGCAGAGTTTCCG...CCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236740.2 |
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| CDS-3UTR CAA 90 bp | TTACATTCAAATTATTATTCTCAGTGTGGAAGTGAGGAGTTGCAGGTCAGGGTAGCAACGGTCGCCATGTaGGAGACAGTGGATGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LHSNYYSQCGSEELQVRVATVAM*ETVDGG Trigger: TCCTCCATCCACTGTCTCCAACATGGCGACCGTTGC...TACCCTGACCTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000236469.2 ENSMUST00000236740.2 |
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| CDS TCA 72 bp | ACCAGACCCCGGGCGGCTGCGCGGGCCGCGCGGGTCTaGGTCGGAGCCAGGGCGGCCGCCAACAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TRPRAAARAARV*VGARAAANSRS Trigger: GCTCCTGCTGTTGGCGGCCGCCCTGGCTCCGACTCAGACCCGCGCGGCCCGCGCAGCCGCCCGGGGTCTGGT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173075.3 |
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| CDS GCA 72 bp | GTGAGACCCGGACCACCTCACCAGACCCCGGGCGGCTaGGCGGGCCGCGCGGGTCTGAGTCGGAGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VRPGPPHQTPGG*AGRAGLSRSQG Trigger: GCCCTGGCTCCGACTCAGACCCGCGCGGCCCGCGCAGCCGCCCGGGGTCTGGTGAGGTGGTCCGGGTCTCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173075.3 |
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| CDS TCA 72 bp | TGGGTCACATGGGCCTTTGGGGAATCCGCGCGGGTCTaGGTCGGAGCCAGGGCGGCCGCCAACAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: WVTWAFGESARV*VGARAAANSRS Trigger: GCTCCTGCTGTTGGCGGCCGCCCTGGCTCCGACTCAGACCCGCGCGGATTCCCCAAAGGCCCATGTGACCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087189.7 |
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| CDS CCA 72 bp | ATCTTCAGGTCTGCTGTGATGGGTCACATGGGCCTTTaGGGAATCCGCGCGGGTCTGAGTCGGAGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: IFRSAVMGHMGL*GIRAGLSRSQG Trigger: GCCCTGGCTCCGACTCAGACCCGCGCGGATTCCCCAAAGGCCCATGTGACCCATCACAGCAGACCTGAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087189.7 |
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| CDS CAA 72 bp | TATCTTCAGGTCTGCTGTGATGGGTCACATGGGCCTTaGGGGAATCCGCGCGGGTCTGAGTCGGAGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: YLQVCCDGSHGP*GNPRGSESEPG Trigger: CCCTGGCTCCGACTCAGACCCGCGCGGATTCCCCAAAGGCCCATGTGACCCATCACAGCAGACCTGAAGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087189.7 |
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| CDS CCA 72 bp | ATCTTCAGGTCTGCTGTGATGGGTCACATGGGCCTTTaGGGAATCTGTGCGCAGCAGCGTCGCGTTCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: IFRSAVMGHMGL*GICAQQRRVPV Trigger: AACGGGAACGCGACGCTGCTGCGCACAGATTCCCCAAAGGCCCATGTGACCCATCACAGCAGACCTGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000173075.3 ENSMUST00000235463.2 ENSMUST00000236740.2 ENSMUST00000238098.2 |
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| CDS CAA 72 bp | TATCTTCAGGTCTGCTGTGATGGGTCACATGGGCCTTaGGGGAATCTGTGCGCAGCAGCGTCGCGTTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: YLQVCCDGSHGP*GNLCAAASRSR Trigger: ACGGGAACGCGACGCTGCTGCGCACAGATTCCCCAAAGGCCCATGTGACCCATCACAGCAGACCTGAAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025181.18 ENSMUST00000172912.8 ENSMUST00000173075.3 ENSMUST00000235463.2 ENSMUST00000236740.2 ENSMUST00000238098.2 |
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| CDS CCA 72 bp | ATCACTTTACAATCTGGGAGAGACAGATCAGAGGTCTaGGAGCCTGTGTTTCTCCTTCTCATCTTCATCACA | + |
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Preference number: 6 (lower is better) Translates to: ITLQSGRDRSEV*EPVFLLLIFIT Trigger: TGTGATGAAGATGAGAAGGAGAAACACAGGCTCCCAGACCTCTGATCTGTCTCTCCCAGATTGTAAAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236469.2 |
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