Pregenerated sensors for H2-DMA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037649Ensembl transcript IDs: ENSMUST00000042121.11, ENSMUST00000236322.2, ENSMUST00000237402.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGCTCTTCTGGATGCAAGTCCAGGGACAGCGGAACCCTCAGCTaGGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: EGSSGCKSRDSGTLS*DTCTLAHTLRDPWD Trigger: GTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTGGACTTGCATCCAGAAGAGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR TCA 90 bp | CACCTGAGCACGGTCTCTGGGAGCAGAGGAAGAAGACAATGCCCATaGTGGTGCCTAGCACACCGAGGCCAAAGGCCACACCACACAGGG | + |
|
Preference number: 1 (lower is better) Translates to: HLSTVSGSRGRRQCP*WCLAHRGQRPHHTG Trigger: CCCTGTGTGGTGTGGCCTTTGGCCTCGGTGTGCTAGGCACCATCATGGGCATTGTCTTCTTCCTCTGCTCCCAGAGACCGTGCTCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR TCA 90 bp | AGAATCCTGGCACACACTGACACGGCACTCTTGTCCCAGGTTCCCTaGCCTTCCCCGGTGACTTACCACCTGAGCACGGTCTCTGGGAGC | + |
|
Preference number: 1 (lower is better) Translates to: RILAHTDTALLSQVP*PSPVTYHLSTVSGS Trigger: GCTCCCAGAGACCGTGCTCAGGTGGTAAGTCACCGGGGAAGGTCAGGGAACCTGGGACAAGAGTGCCGTGTCAGTGTGTGCCAGGATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 90 bp | GTCAAATGCAATGGCAGAGGCATCCCCCTGTCCCTGAGCCCACTCTaGAAAGTCAGGCAGTCGGGGCACTCTGGTGTTCTGGGAGAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: VKCNGRGIPLSLSPL*KVRQSGHSGVLGEV Trigger: GACTTCTCCCAGAACACCAGAGTGCCCCGACTGCCTGACTTTGCAGAGTGGGCTCAGGGACAGGGGGATGCCTCTGCCATTGCATTTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 90 bp | GGTTCCCTGACCTTCCCCGGTGACTTACCACCTGAGCACGGTCTCTaGGAGCAGAGGAAGAAGACAATGCCCATGATGGTGCCTAGCACA | + |
|
Preference number: 1 (lower is better) Translates to: GSLTFPGDLPPEHGL*EQRKKTMPMMVPST Trigger: TGTGCTAGGCACCATCATGGGCATTGTCTTCTTCCTCTGCTCCCAGAGACCGTGCTCAGGTGGTAAGTCACCGGGGAAGGTCAGGGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR TCA 90 bp | ACCAGGAAAGAGTATACAGGCCAAGTGGAGAATCCTGGCACACACTaGCACGGCACTCTTGTCCCAGGTTCCCTGACCTTCCCCGGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: TRKEYTGQVENPGTH*HGTLVPGSLTFPGD Trigger: GTCACCGGGGAAGGTCAGGGAACCTGGGACAAGAGTGCCGTGTCAGTGTGTGCCAGGATTCTCCACTTGGCCTGTATACTCTTTCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 90 bp | GTAGGAAAAGTGAGAGATAGTGTGGAGAGGTTGGCGGGAGTAAGATaGCAGCCCTCCCTCCACCCCCAAATGCCACTCCTTGTCCCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: VGKVRDSVERLAGVR*QPSLHPQMPLLVPD Trigger: GTCAGGGACAAGGAGTGGCATTTGGGGGTGGAGGGAGGGCTGCCATCTTACTCCCGCCAACCTCTCCACACTATCTCTCACTTTTCCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 90 bp | CGGGCTCACTTCCCGCATCAACATCTCGCAGAAGCTTTTGTCAAATaGAATGGCAGAGGCATCCCCCTGTCCCTGAGCCCACTCTGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: RAHFPHQHLAEAFVK*NGRGIPLSLSPLCK Trigger: TTTGCAGAGTGGGCTCAGGGACAGGGGGATGCCTCTGCCATTGCATTTGACAAAAGCTTCTGCGAGATGTTGATGCGGGAAGTGAGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 90 bp | AAGGACCGGACTTCCATGGAAAAGGGCCTCACCCCAATAGGCAATTaGCGTGTAGCGGTCAATCTCGTGTGTCACAGTGCAGGAGTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: KDRTSMEKGLTPIGN*RVAVNLVCHSAGVK Trigger: CTTTACTCCTGCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGGTGAGGCCCTTTTCCATGGAAGTCCGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 90 bp | GAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGGTAGTGGTTAGGTaGAGCCTGGGGCTCCTGATGAAGGCTCTTCTGGATGCAAGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: EVYFLEEGRYKVVVR*SLGLLMKALLDASP Trigger: TGGACTTGCATCCAGAAGAGCCTTCATCAGGAGCCCCAGGCTCCACCTAACCACTACCTTATACCTTCCCTCTTCCAGGAAATAAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR TCA 90 bp | TCTCGTGTGTCACAGTGCAGGAGTAAAGGTCAAAGGGTTCCGGTGTaGAGTTTAAATAAGAGAAAGCCTGGAAGGTCAGCCCATCGACAG | + |
|
Preference number: 1 (lower is better) Translates to: SRVSQCRSKGQRVPV*SLNKRKPGRSAHRQ Trigger: CTGTCGATGGGCTGACCTTCCAGGCTTTCTCTTATTTAAACTTCACACCGGAACCCTTTGACCTTTACTCCTGCACTGTGACACACGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 90 bp | TTCCAAGATCTCCTTGAGAAGAATCAGTCTGAAGAGAGAGCAGAGTaGAGGGAAGTCACCATAAGGAGCCTCTCCCTTCCTCAAGTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: FQDLLEKNQSEERAE*REVTIRSLSLPQVS Trigger: AGACACTTGAGGAAGGGAGAGGCTCCTTATGGTGACTTCCCTGCACTCTGCTCTCTCTTCAGACTGATTCTTCTCAAGGAGATCTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 90 bp | ATAATGAGGAAGAATTGGATCATGGAAGCCCGAAGTTGGCTAGAGTaGAGACTAGACTCAAGGAGACCAAGTAAAATTAGAGGGCCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: IMRKNWIMEARSWLE*RLDSRRPSKIRGPH Trigger: GTGGGGCCCTCTAATTTTACTTGGTCTCCTTGAGTCTAGTCTCCACTCTAGCCAACTTCGGGCTTCCATGATCCAATTCTTCCTCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGCCTGGACATCCCCGCTaGCCTGGCCTGTGCTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QLRHLHAGTHPEGSLGLRPGHPR*PGLCCS Trigger: GGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG...CCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGCTCCGACCTGGACATCCCCGCTaGCCTGGCCTGTGCTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RHLHAGTHPEGSLGLRLRPGHPR*PGLCCS Trigger: GGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG...TCGGAGCCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR GCA 90 bp | AGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGCTCCGATGGGTAGTCACGAGATaGCTGGACATCCCCGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RHLHAGTHPEGSLGLRLRWVVTR*LDIPAG Trigger: GCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCA...TCGGAGCCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGCGCTGGCCTGGCCTGTaGTGTTCCAAGATCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QGQRNPQLRHLHAGTHPERWPGL*CSKISL Trigger: CAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCG...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGACATCCCCGCTGGCCTaGCCTGTGCTGTTCCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QGQRNPQLRHLHAGTHPETSPLA*PVLFQD Trigger: ATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGT...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTACATCCCCGCTGGCCTaGCCTGTGCTGTTCCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PQLRHLHAGTHPEGSLGLTSPLA*PVLFQD Trigger: ATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGT...AAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGCGCTGGCCTGGCCTGTaGTGTTCCAAGATCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SDERPWVVTRCLDIPAGLRWPGL*CSKISL Trigger: CAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCG...CAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTTCCGATGAGAGACCTTaGGTAGTCACGAGATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PQLRHLHAGTHPEGSLGLSDERP*VVTRCL Trigger: CAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA...AAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGTCCGATGAGAGACCTTaGGTAGTCACGAGATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SDERPWVVTRCLDIPAGLSDERP*VVTRCL Trigger: CAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA...CAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCTGGACACTGGGATTTGACCTTCAAGCTTCGGGCTCACTTCCCGCATCAAGCATCCCCCTGTCCCTaGGCCCACTCTGCAAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSGHWDLTFKLRAHFPHQASPCP*AHSAKS Trigger: TGACTTTGCAGAGTGGGCTCAGGGACAGGGGGATGC...TTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTGTTTCTGTGCTCCCAAATAACTGTGTCTGTAACAGGGTCCCCAGCTACAGATGGATGTGGGGCTaGCTCCCTCCACAGGGGCCG | + |
|
Preference number: 2 (lower is better) Translates to: QAVSVLPNNCVCNRVPSYRWMWG*LPPQGP Trigger: CGGCCCCTGTGGAGGGAGCCAGCCCCACATCCATCT...GTAGCTGGGGACCCTGTTACAGACACAGTTATTTGGGAGCACAGAAACAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 90 bp | ACCCCCAAATGCCACTCCTTGTCCCTGACCTCTGGACACTGGGATTaGACCTTCAAGCTTCGGGCTCACTTCCCGCATCAACATCTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: TPKCHSLSLTSGHWD*TFKLRAHFPHQHLA Trigger: TGCGAGATGTTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTCAGGGACAAGGAGTGGCATTTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 90 bp | AAACAGAGCCAGGAGGTAGGAAAAGTGAGAGATAGTGTGGAGAGGTaGGCGGGAGTAAGATGGCAGCCCTCCCTCCACCCCCAAATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KQSQEVGKVRDSVER*AGVRWQPSLHPQMP Trigger: TGGCATTTGGGGGTGGAGGGAGGGCTGCCATCTTACTCCCGCCAACCTCTCCACACTATCTCTCACTTTTCCTACCTCCTGGCTCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 90 bp | CCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTCCAAGATCTCCTaGAGAAGAATCAGTCTGAAGAGAGAGCAGAGTGCAGGGAAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PGHPRWPGLCCSKIS*RRISLKREQSAGKS Trigger: TGACTTCCCTGCACTCTGCTCTCTCTTCAGACTGATTCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGGTCTTCCCGGCAAAAACTGCAGCTAGGACACTGTGTGGATGGACCCCTCTTCGATGCCTTCAGCTaGCTCCTCCCCATCACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: EGSSRQKLQLGHCVDGPLFDAFS*LLPITK Trigger: TTTTGTGATGGGGAGGAGGCAGCTGAAGGCATCGAA...GAGGGGTCCATCCACACAGTGTCCTAGCTGCAGTTTTTGCCGGGAAGACCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 90 bp | GAAGGACCGGACTTCCATGGAAAAGGGCCTCACCCCAATAGGCAATaGCCGTGTAGCGGTCAATCTCGTGTGTCACAGTGCAGGAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: EGPDFHGKGPHPNRQ*PCSGQSRVSQCRSK Trigger: TTTACTCCTGCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGGTGAGGCCCTTTTCCATGGAAGTCCGGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAGCTGTTTCTGTGCTCCCAAATAACTGTGTCTGTAACAGGGTCCCCAGCTGCCACTCCTTGTCCCTaGCCTCTGGACACTGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SKLFLCSQITVSVTGSPAATPCP*PLDTGI Trigger: AATCCCAGTGTCCAGAGGTCAGGGACAAGGAGTGGC...AGCTGGGGACCCTGTTACAGACACAGTTATTTGGGAGCACAGAAACAGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTGTGCTGTTCCAAGATCTCCTTGAGAAGAATCAGTCTGAAGAGAGAGCAGCGCTGGCCTGGCCTGTaGTGTTCCAAGATCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GLCCSKISLRRISLKREQRWPGL*CSKISL Trigger: CAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCG...CTGCTCTCTCTTCAGACTGATTCTTCTCAAGGAGATCTTGGAACAGCACAGGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCCAGCTACCAGGAAAGAGTATACAGGCCAAGTGGAGAATCCTGGCACACATCTCGTGTGTCACAGTaGAGGAGTAAAGGTCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VPSYQERVYRPSGESWHTSRVSQ*RSKGQR Trigger: CCTTTGACCTTTACTCCTGCACTGTGACACACGAGA...TGTGTGCCAGGATTCTCCACTTGGCCTGTATACTCTTTCCTGGTAGCTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCACGCTGACATTAAGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGCGCTGGCACACACCCTaGGGGATCCCTGGGACTTCG | + |
|
Preference number: 2 (lower is better) Translates to: VTLTLRNEVYFLEEGRYKRWHTP*GIPGTS Trigger: CGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCG...CTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCTTAATGTCAGCGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTGTTTCTGTGCTCCCAAATAACTGTGTCTGTAACAGGGTCCCCAGCTACCTTGTCCCTGACCTCTaGACACTGGGATTTGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: QAVSVLPNNCVCNRVPSYLVPDL*TLGFDL Trigger: AAGGTCAAATCCCAGTGTCCAGAGGTCAGGGACAAG...GTAGCTGGGGACCCTGTTACAGACACAGTTATTTGGGAGCACAGAAACAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCCCAGCTACCAGGAAAGAGTATACAGGCCAAGTGGAGAATCCTGGCACACACATGCAGTGGGGTCATaGAGTTCAATAGATTTCGAT | + |
|
Preference number: 2 (lower is better) Translates to: VPSYQERVYRPSGESWHTHAVGS*SSIDFD Trigger: ATCGAAATCTATTGAACTTCATGACCCCACTGCATG...TGTGTGCCAGGATTCTCCACTTGGCCTGTATACTCTTTCCTGGTAGCTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTGTGCTGTTCCAAGATCTCCTTGAGAAGAATCAGTCTGAAGAGAGAGCAGCGAAGTTGGCTAGAGTaGAGACTAGACTCAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLCCSKISLRRISLKREQRSWLE*RLDSRR Trigger: TCTCCTTGAGTCTAGTCTCCACTCTAGCCAACTTCG...CTGCTCTCTCTTCAGACTGATTCTTCTCAAGGAGATCTTGGAACAGCACAGGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGCTGACATTAAGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGGTAACATCCCCGCTGGCCTaGCCTGTGCTGTTCCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLTLRNEVYFLEEGRYKVTSPLA*PVLFQD Trigger: ATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGT...TACCTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCTTAATGTCAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGGTAGTGGTTAGGTGGGAAGCTTTTGTCAAATaGAATGGCAGAGGCATCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RNEVYFLEEGRYKVVVRWEAFVK*NGRGIP Trigger: GGGGATGCCTCTGCCATTGCATTTGACAAAAGCTTC...CCACCTAACCACTACCTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | GACACCTGCACGCTGGCACACACCCTGAGGGATCCCTaGGACTTCGGCTCCGATGAGAGACCTTGGGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DTCTLAHTLRDP*DFGSDERPWVV Trigger: GACTACCCAAGGTCTCTCATCGGAGCCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR GCA 72 bp | TTCGGCTCCGATGAGAGACCTTGGGTAGTCACGAGATaGCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FGSDERPWVVTR*LDIPAGLACAV Trigger: AACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGAGCCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR TCA 72 bp | ACGGTCTCTGGGAGCAGAGGAAGAAGACAATGCCCATaGTGGTGCCTAGCACACCGAGGCCAAAGGCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: TVSGSRGRRQCP*WCLAHRGQRPH Trigger: GTGTGGCCTTTGGCCTCGGTGTGCTAGGCACCATCATGGGCATTGTCTTCTTCCTCTGCTCCCAGAGACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | ACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTaGCCTGGCCTGTGCTGTTCCAAGATCTCCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLGSHEMPGHPR*PGLCCSKISLR Trigger: TCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | GTGAGAGATAGTGTGGAGAGGTTGGCGGGAGTAAGATaGCAGCCCTCCCTCCACCCCCAAATGCCACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRDSVERLAGVR*QPSLHPQMPLL Trigger: AAGGAGTGGCATTTGGGGGTGGAGGGAGGGCTGCCATCTTACTCCCGCCAACCTCTCCACACTATCTCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 72 bp | CACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTaGTGTTCCAAGATCTCCTTGAGAAGAATCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HEMPGHPRWPGL*CSKISLRRISL Trigger: CAGACTGATTCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | GAGCCCACTCTGCAAAGTCAGGCAGTCGGGGCACTCTaGTGTTCTGGGAGAAGTCGAAGGAGAAGAGTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: EPTLQSQAVGAL*CSGRSRRRRVR Trigger: ACGAACTCTTCTCCTTCGACTTCTCCCAGAACACCAGAGTGCCCCGACTGCCTGACTTTGCAGAGTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | CCCAAATGCCACTCCTTGTCCCTGACCTCTGGACACTaGGATTTGACCTTCAAGCTTCGGGCTCACTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PKCHSLSLTSGH*DLTFKLRAHFP Trigger: CGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTCAGGGACAAGGAGTGGCATTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | CTCCACCCCCAAATGCCACTCCTTGTCCCTGACCTCTaGACACTGGGATTTGACCTTCAAGCTTCGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHPQMPLLVPDL*TLGFDLQASGS Trigger: TGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTCAGGGACAAGGAGTGGCATTTGGGGGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CAA 90 bp | CGAGGGACGTGGGTATCCGGGATAATGAGGAAGAATTGGATCATGGAAGCCCGAACCAACGTGTTGGGCTaGCCAAACTCCAGGGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RGTWVSGIMRKNWIMEARTNVLG*PNSRGF Trigger: GAAGCCCCTGGAGTTTGGCAAGCCCAACACGTTGGT...TCGGGCTTCCATGATCCAATTCTTCCTCATTATCCCGGATACCCACGTCCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR TCA 72 bp | GAGTATACAGGCCAAGTGGAGAATCCTGGCACACACTaGCACGGCACTCTTGTCCCAGGTTCCCTGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EYTGQVENPGTH*HGTLVPGSLTF Trigger: GAAGGTCAGGGAACCTGGGACAAGAGTGCCGTGTCAGTGTGTGCCAGGATTCTCCACTTGGCCTGTATACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 72 bp | AAACTGCAGCTAGGACACTGTGTGGATGGACCCCTCTaGCCTGACTTCCTGTCTGTAGCCAGGTTGGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: KLQLGHCVDGPL*PDFLSVARLAS Trigger: AGATGCCAACCTGGCTACAGACAGGAAGTCAGGGCAGAGGGGTCCATCCACACAGTGTCCTAGCTGCAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | GGCCGAGTGAAGCTGCCAGTTCACGGTCAGGGTCGGTaGAAAGAGGTTGCTGATGAAACAGACCAACGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GRVKLPVHGQGR*KEVADETDQRV Trigger: AACACGTTGGTCTGTTTCATCAGCAACCTCTTTCCACCGACCCTGACCGTGAACTGGCAGCTTCACTCGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | GGTCCCCAGCTACCAGGAAAGAGTATACAGGCCAAGTaGAGAATCCTGGCACACACTGACACGGCACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GPQLPGKSIQAK*RILAHTDTALL Trigger: CAAGAGTGCCGTGTCAGTGTGTGCCAGGATTCTCCACTTGGCCTGTATACTCTTTCCTGGTAGCTGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 72 bp | TTCCCGCATCAACATCTCGCAGAAGCTTTTGTCAAATaGAATGGCAGAGGCATCCCCCTGTCCCTGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FPHQHLAEAFVK*NGRGIPLSLSP Trigger: TGGGCTCAGGGACAGGGGGATGCCTCTGCCATTGCATTTGACAAAAGCTTCTGCGAGATGTTGATGCGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | GGGCAGACAAGGAACCAACAGAGAGATGAGGACATTTaGGGGTCCAAGAAGGGTCTTCCCGGCAAAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GQTRNQQRDEDI*GSKKGLPGKNC Trigger: GCAGTTTTTGCCGGGAAGACCCTTCTTGGACCCCCAAATGTCCTCATCTCTCTGTTGGTTCCTTGTCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR GCA 72 bp | ACTTCCATGGAAAAGGGCCTCACCCCAATAGGCAATTaGCGTGTAGCGGTCAATCTCGTGTGTCACAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSMEKGLTPIGN*RVAVNLVCHSA Trigger: TGCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGGTGAGGCCCTTTTCCATGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | TACCAGGAAAGAGTATACAGGCCAAGTGGAGAATCCTaGCACACACTGACACGGCACTCTTGTCCCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: YQERVYRPSGES*HTLTRHSCPRF Trigger: GAACCTGGGACAAGAGTGCCGTGTCAGTGTGTGCCAGGATTCTCCACTTGGCCTGTATACTCTTTCCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCACCCCCAAATGCCACTCCTTGTCCCTGACCTCTGGACACTGGGATTTGACATCTCGCAGAAGCTTTaGTCAAATGCAATGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHPQMPLLVPDLWTLGFDISQKL*SNAMAE Trigger: CTCTGCCATTGCATTTGACAAAAGCTTCTGCGAGAT...GTCAAATCCCAGTGTCCAGAGGTCAGGGACAAGGAGTGGCATTTGGGGGTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR TCA 72 bp | CCGGGCACGGTAATGAGAATGCATGCAGTGGGGTCATaGAGTTCAATAGATTTCGATGCCTTCAGCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGTVMRMHAVGS*SSIDFDAFSCL Trigger: GAGGCAGCTGAAGGCATCGAAATCTATTGAACTTCATGACCCCACTGCATGCATTCTCATTACCGTGCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAACTGTGTCTGTAACAGGGTCCCCAGCTACCAGGAAAGAGTATACAGGCCAAAACAGACCAACGTGTaGGGCTTGCCAAACTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NNCVCNRVPSYQERVYRPKQTNV*GLPNSR Trigger: CCTGGAGTTTGGCAAGCCCAACACGTTGGTCTGTTT...TGGCCTGTATACTCTTTCCTGGTAGCTGGGGACCCTGTTACAGACACAGTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTACCAGGAAAGAGTATACAGGCCAAGTGGAGAATCCTGGCACACACTGACAGATAATGAGGAAGAATaGGATCATGGAAGCCCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SYQERVYRPSGESWHTLTDNEEE*DHGSPK Trigger: CTTCGGGCTTCCATGATCCAATTCTTCCTCATTATC...TGTCAGTGTGTGCCAGGATTCTCCACTTGGCCTGTATACTCTTTCCTGGTAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR TCA 72 bp | TCACAGTGCAGGAGTAAAGGTCAAAGGGTTCCGGTGTaGAGTTTAAATAAGAGAAAGCCTGGAAGGTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQCRSKGQRVPV*SLNKRKPGRSA Trigger: GGCTGACCTTCCAGGCTTTCTCTTATTTAAACTTCACACCGGAACCCTTTGACCTTTACTCCTGCACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CCA 72 bp | ATAATGAGGAAGAATTGGATCATGGAAGCCCGAAGTTaGCTAGAGTGGAGACTAGACTCAAGGAGACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IMRKNWIMEARS*LEWRLDSRRPS Trigger: ACTTGGTCTCCTTGAGTCTAGTCTCCACTCTAGCCAACTTCGGGCTTCCATGATCCAATTCTTCCTCATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGCTCCGACAGCCCATCGACAGCTaGGATGGATGTGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLHAGTHPEGSLGLRLRQPIDS*DGCGAG Trigger: GCCAGCCCCACATCCATCTCAGCTGTCGATGGGCTG...TCGGAGCCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTAGATGGATGTGGGGCTaGCTCCCTCCACAGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ERPWVVTRCLDIPAGLACRWMWG*LPPQGP Trigger: CGGCCCCTGTGGAGGGAGCCAGCCCCACATCCATCT...ACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGACTTCGGCTCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACAGATGGATGTGGGGCTaGCTCCCTCCACAGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PWDFGSDERPWVVTRCLDRWMWG*LPPQGP Trigger: CGGCCCCTGTGGAGGGAGCCAGCCCCACATCCATCT...GTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGAGCCGAAGTCCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTGCATCCCCCTGTCCCTaGGCCCACTCTGCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWVVTRCLDIPAGLACAVASPCP*AHSAKS Trigger: TGACTTTGCAGAGTGGGCTCAGGGACAGGGGGATGC...AACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGCAGTCGGGGCACTCTaGTGTTCTGGGAGAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQRNPQLRHLHAGTHPEAVGAL*CSGRSR Trigger: TCGACTTCTCCCAGAACACCAGAGTGCCCCGACTGC...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTCCAAGATCTCCTTGAGAAGACAGCCCATCGACAGCTaGGATGGATGTGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGHPRWPGLCCSKISLRRQPIDS*DGCGAG Trigger: GCCAGCCCCACATCCATCTCAGCTGTCGATGGGCTG...TCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGCCAACGTGTTGGGCTTaGCAAACTCCAGGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGQRNPQLRHLHAGTHPEPTCWA*QTPGAS Trigger: TGAAGCCCCTGGAGTTTGGCAAGCCCAACACGTTGG...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGCCTGAGCACGGTCTCTaGGAGCAGAGGAAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGQRNPQLRHLHAGTHPEPEHGL*EQRKKT Trigger: TGTCTTCTTCCTCTGCTCCCAGAGACCGTGCTCAGG...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTCCAACGTGTTGGGCTTaGCAAACTCCAGGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERPWVVTRCLDIPAGLACPTCWA*QTPGAS Trigger: TGAAGCCCCTGGAGTTTGGCAAGCCCAACACGTTGG...ACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGAACAGACCAACGTGTTaGGCTTGCCAAACTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQRNPQLRHLHAGTHPENRPTC*ACQTPG Trigger: CCCTGGAGTTTGGCAAGCCCAACACGTTGGTCTGTT...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | AGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGCTCCGAAACAGACCAACGTGTTaGGCTTGCCAAACTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLHAGTHPEGSLGLRLRNRPTC*ACQTPG Trigger: CCCTGGAGTTTGGCAAGCCCAACACGTTGGTCTGTT...TCGGAGCCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTCCTGAGCACGGTCTCTaGGAGCAGAGGAAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ERPWVVTRCLDIPAGLACPEHGL*EQRKKT Trigger: TGTCTTCTTCCTCTGCTCCCAGAGACCGTGCTCAGG...ACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGACTTCGGCTCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACTTGGGAATCCCGTCCTaGCAGAATAGAGTGTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PWDFGSDERPWVVTRCLDLGIPS*QNRVCR Trigger: CCGGCACACTCTATTCTGCCAGGACGGGATTCCCAA...GTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGAGCCGAAGTCCCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTCCAAGATCTCCTTGAGAAGACAGCAGCACAGCTCCTaGCTTCTGCTCATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGHPRWPGLCCSKISLRRQQHSS*LLLMLH Trigger: ATGGAGCATGAGCAGAAGTCAGGAGCTGTGCTGCTG...TCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 ENSMUST00000237402.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGACAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGTCTCGTGTGTCACAGTaGAGGAGTAAAGGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQRNPQLRHLHAGTHPESRVSQ*RSKGQR Trigger: CCTTTGACCTTTACTCCTGCACTGTGACACACGAGA...CTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | CAGCGGAACCCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCTACCCAATAGGCAATTaGCGTGTAGCGGTCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRNPQLRHLHAGTHPEGSYPIGN*RVAVNL Trigger: GAGATTGACCGCTACACGGCAATTGCCTATTGGGTA...GGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGGGTTCCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTGAATGTGTGGTTCTGTaGGTCATCCCAGAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWVVTRCLDIPAGLACAVECVVL*VIPEHW Trigger: CCAGTGTTCTGGGATGACCCACAGAACCACACATTC...AACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTCCAAGATCTCCTTGAGAAGATTGGGAATCCCGTCCTaGCAGAATAGAGTGTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHPRWPGLCCSKISLRRLGIPS*QNRVCR Trigger: CCGGCACACTCTATTCTGCCAGGACGGGATTCCCAA...TCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTCCACAGGCAAACCTCTaGACACTGGGATTTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWVVTRCLDIPAGLACAVPQANL*TLGFDL Trigger: AAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGG...AACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | TCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGCAGTGTGAATACCTCTaGCACAGGCAAACCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDERPWVVTRCLDIPAGLQCEYL*HRQTSG Trigger: TCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACTG...CAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGACTTCGGCTCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACGAATGTGTGGTTCTGTaGGTCATCCCAGAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWDFGSDERPWVVTRCLDECVVL*VIPEHW Trigger: CCAGTGTTCTGGGATGACCCACAGAACCACACATTC...GTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGAGCCGAAGTCCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCATCTTGCCGGGCACGGTAATGAGAATGCATGCAGTGGGGTCATGAAGCAGCAGCACAGCTCCTaGCTTCTGCTCATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLAGHGNENACSGVMKQQHSS*LLLMLH Trigger: ATGGAGCATGAGCAGAAGTCAGGAGCTGTGCTGCTG...CTTCATGACCCCACTGCATGCATTCTCATTACCGTGCCCGGCAAGATGGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| CDS-3UTR GCA 90 bp | TCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGAAGCTTTTGTCAAATaGAATGGCAGAGGCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDERPWVVTRCLDIPAGLEAFVK*NGRGIP Trigger: GGGGATGCCTCTGCCATTGCATTTGACAAAAGCTTC...CAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | TCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGTCTCGTGTGTCACAGTaGAGGAGTAAAGGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDERPWVVTRCLDIPAGLSRVSQ*RSKGQR Trigger: CCTTTGACCTTTACTCCTGCACTGTGACACACGAGA...CAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGACTTCGGCTCCGATGAGAGACCTTGGGTAGTCACGAGATGCCTGGACTACCCAATAGGCAATTaGCGTGTAGCGGTCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWDFGSDERPWVVTRCLDYPIGN*RVAVNL Trigger: GAGATTGACCGCTACACGGCAATTGCCTATTGGGTA...GTCCAGGCATCTCGTGACTACCCAAGGTCTCTCATCGGAGCCGAAGTCCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTCCAAGATCTCCTTGAGAAGACCACAGGCAAACCTCTaGACACTGGGATTTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGHPRWPGLCCSKISLRRPQANL*TLGFDL Trigger: AAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGG...TCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGGATGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| 3UTR CAA 72 bp | TGCCACTCCTTGTCCCTGACCTCTGGACACTGGGATTaGACCTTCAAGCTTCGGGCTCACTTCCCGCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CHSLSLTSGHWD*TFKLRAHFPHQ Trigger: TTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTCAGGGACAAGGAGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 72 bp | CCCCGCTGGCCTGGCCTGTGCTGTTCCAAGATCTCCTaGAGAAGAATCAGTCTGAAGAGAGAGCAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRWPGLCCSKIS*RRISLKREQSA Trigger: TGCACTCTGCTCTCTCTTCAGACTGATTCTTCTCAAGGAGATCTTGGAACAGCACAGGCCAGGCCAGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 72 bp | GACTTCCATGGAAAAGGGCCTCACCCCAATAGGCAATaGCCGTGTAGCGGTCAATCTCGTGTGTCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFHGKGPHPNRQ*PCSGQSRVSQC Trigger: GCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGGTGAGGCCCTTTTCCATGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 72 bp | CCGAGGGACGTGGGTATCCGGGATAATGAGGAAGAATaGGATCATGGAAGCCCGAAGTTGGCTAGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRDVGIRDNEEE*DHGSPKLARVE Trigger: CTCCACTCTAGCCAACTTCGGGCTTCCATGATCCAATTCTTCCTCATTATCCCGGATACCCACGTCCCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 72 bp | GGACCCCTCTGCCCTGACTTCCTGTCTGTAGCCAGGTaGGCATCTGACACTGGCTTCTTGTTAAAACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLCPDFLSVAR*ASDTGFLLKHK Trigger: CTTGTGTTTTAACAAGAAGCCAGTGTCAGATGCCAACCTGGCTACAGACAGGAAGTCAGGGCAGAGGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| 3UTR CAA 72 bp | CTGTCTGTAGCCAGGTTGGCATCTGACACTGGCTTCTaGTTAAAACACAAGCTCATCCCTCCATCTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVARLASDTGF*LKHKLIPPSCR Trigger: CCGGCAAGATGGAGGGATGAGCTTGTGTTTTAACAAGAAGCCAGTGTCAGATGCCAACCTGGCTACAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| CDS-3UTR TCA 90 bp | GTCACGCTGACATTAAGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGGCATCCCCCTGTCCCTaGGCCCACTCTGCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTLTLRNEVYFLEEGRYKASPCP*AHSAKS Trigger: TGACTTTGCAGAGTGGGCTCAGGGACAGGGGGATGC...CTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCTTAATGTCAGCGTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR TCA 90 bp | AGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGGTAGTGGTTAGGTGGCTGGACACTGGGATTTaGCCTTCAAGCTTCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNEVYFLEEGRYKVVVRWLDTGI*PSSFGL Trigger: GAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAG...CCACCTAACCACTACCTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| 3UTR CAA 72 bp | GATAATGAGGAAGAATTGGATCATGGAAGCCCGAAGTaGGCTAGAGTGGAGACTAGACTCAAGGAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DNEEELDHGSPK*ARVETRLKETK Trigger: CTTGGTCTCCTTGAGTCTAGTCTCCACTCTAGCCAACTTCGGGCTTCCATGATCCAATTCTTCCTCATTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237402.2 |
||
| CDS-3UTR TCA 90 bp | GTCACGCTGACATTAAGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGCAGCAGCACAGCTCCTaGCTTCTGCTCATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTLTLRNEVYFLEEGRYKQQHSS*LLLMLH Trigger: ATGGAGCATGAGCAGAAGTCAGGAGCTGTGCTGCTG...CTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCTTAATGTCAGCGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR TCA 90 bp | GTCACGCTGACATTAAGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGCTGGACACTGGGATTTaGCCTTCAAGCTTCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTLTLRNEVYFLEEGRYKLDTGI*PSSFGL Trigger: GAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAG...CTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCTTAATGTCAGCGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR GCA 90 bp | GTCACGCTGACATTAAGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGCAGTGTGAATACCTCTaGCACAGGCAAACCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTLTLRNEVYFLEEGRYKQCEYL*HRQTSG Trigger: TCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACTG...CTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCTTAATGTCAGCGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | AGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGCTCCGAACCAACGTGTTGGGCTaGCCAAACTCCAGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RHLHAGTHPEGSLGLRLRTNVLG*PNSRGF Trigger: GAAGCCCCTGGAGTTTGGCAAGCCCAACACGTTGGT...TCGGAGCCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS GCA 90 bp | CCGGAATGTGTGGTTCTGTGGGTCATCCCAGAACACTGGTGTAGATaGTTCGAGCACCGCCCAGGAGTGGGGCAGCAGCCACAGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PECVVLWVIPEHWCR*FEHRPGVGQQPQKA Trigger: CGCCTTCTGTGGCTGCTGCCCCACTCCTGGGCGGTGCTCGAAGCATCTACACCAGTGTTCTGGGATGACCCACAGAACCACACATTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTACCAACGTGTTGGGCTaGCCAAACTCCAGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PWVVTRCLDIPAGLACAVTNVLG*PNSRGF Trigger: GAAGCCCCTGGAGTTTGGCAAGCCCAACACGTTGGT...AACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTCGGGTCGGTGGAAAGAGGTaGCTGATGAAACAGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QLRHLHAGTHPEGSLGLRVGGKR*LMKQTN Trigger: GTTGGTCTGTTTCATCAGCAACCTCTTTCCACCGAC...CCGAAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CCA 90 bp | CCTGTCCCTGAGCCCACTCTGCAAAGTCAGGCAGTCGGGGCACTCTaGTGTTCTGGGAGAAGTCGAAGGAGAAGAGTTCGTCCTCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PVPEPTLQSQAVGAL*CSGRSRRRRVRPRH Trigger: ATGACGAGGACGAACTCTTCTCCTTCGACTTCTCCCAGAACACCAGAGTGCCCCGACTGCCTGACTTTGCAGAGTGGGCTCAGGGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTGCTGTTGTACCCAATAGGCAATaGCCGTGTAGCGGTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PWVVTRCLDIPAGLACAVVPNRQ*PCSGQS Trigger: AGATTGACCGCTACACGGCAATTGCCTATTGGGTAC...AACAGCACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTGTACCCAATAGGCAATaGCCGTGTAGCGGTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLRHLHAGTHPEGSLGLVPNRQ*PCSGQS Trigger: AGATTGACCGCTACACGGCAATTGCCTATTGGGTAC...AAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCTGAGACACCTGCACGCTGGCACACACCCTGAGGGATCCCTGGGACTTATCTCGCAGAAGCTTTaGTCAAATGCAATGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQLRHLHAGTHPEGSLGLISQKL*SNAMAE Trigger: CTCTGCCATTGCATTTGACAAAAGCTTCTGCGAGAT...AAGTCCCAGGGATCCCTCAGGGTGTGTGCCAGCGTGCAGGTGTCTCAGCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGACCTTGGGTAGTCACGAGATGCCTGGACATCCCCGCTGGCCTGGCCTGTATCTCGCAGAAGCTTTaGTCAAATGCAATGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERPWVVTRCLDIPAGLACISQKL*SNAMAE Trigger: CTCTGCCATTGCATTTGACAAAAGCTTCTGCGAGAT...ACAGGCCAGGCCAGCGGGGATGTCCAGGCATCTCGTGACTACCCAAGGTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS GCA 90 bp | TCCGAGAGCCCTATGTTGGGAATCCCGTCCTGGCAGAATAGAGTGTaGCGGAATGTGTGGTTCTGTGGGTCATCCCAGAACACTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SESPMLGIPSWQNRV*RNVWFCGSSQNTGV Trigger: TACACCAGTGTTCTGGGATGACCCACAGAACCACACATTCCGGCACACTCTATTCTGCCAGGACGGGATTCCCAACATAGGGCTCTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CCA 90 bp | AGGAGAAGAGTTCGTCCTCGTCATAGGTCTCCGAGAGCCCTATGTTaGGAATCCCGTCCTGGCAGAATAGAGTGTGCCGGAATGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRRVRPRHRSPRALC*ESRPGRIECAGMCG Trigger: ACCACACATTCCGGCACACTCTATTCTGCCAGGACGGGATTCCCAACATAGGGCTCTCGGAGACCTATGACGAGGACGAACTCTTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS TCA 90 bp | AGTGTGAATACCTCTGCCACAGGCAAACCTCTGGACACTGGGATTTaGCCTTCAAGCTTCGGGCTCACTTCCCGCATCAACATCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVNTSATGKPLDTGI*PSSFGLTSRINISQ Trigger: CTGCGAGATGTTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS TCA 90 bp | AACAGACCAACGTGTTGGGCTTGCCAAACTCCAGGGGCTTCAGTGTaGATACCTCTGCCACAGGCAAACCTCTGGACACTGGGATTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NRPTCWACQTPGASV*IPLPQANLWTLGFD Trigger: GTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACTGAAGCCCCTGGAGTTTGGCAAGCCCAACACGTTGGTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CCA 90 bp | GGGCTTCAGTGTGAATACCTCTGCCACAGGCAAACCTCTGGACACTaGGATTTGACCTTCAAGCTTCGGGCTCACTTCCCGCATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GLQCEYLCHRQTSGH*DLTFKLRAHFPHQH Trigger: ATGTTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACTGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGAAGTTTATTTCCTGGAAGAGGGAAGGTATAAGGTAGTGGTTAGGTGGAAACAGACCAACGTGTaGGGCTTGCCAAACTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNEVYFLEEGRYKVVVRWKQTNV*GLPNSR Trigger: CCTGGAGTTTGGCAAGCCCAACACGTTGGTCTGTTT...CCACCTAACCACTACCTTATACCTTCCCTCTTCCAGGAAATAAACTTCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS GCA 72 bp | GTGGTTCTGTGGGTCATCCCAGAACACTGGTGTAGATaGTTCGAGCACCGCCCAGGAGTGGGGCAGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VVLWVIPEHWCR*FEHRPGVGQQP Trigger: TGGCTGCTGCCCCACTCCTGGGCGGTGCTCGAAGCATCTACACCAGTGTTCTGGGATGACCCACAGAACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CAA 72 bp | CCGAAGGCAGGGCGTTCTGGGGTACCCAATAGGCAATaGCCGTGTAGCGGTCAATCTCGTGTGTCACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PKAGRSGVPNRQ*PCSGQSRVSQC Trigger: GCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGTACCCCAGAACGCCCTGCCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS GCA 72 bp | CGAAGGCAGGGCGTTCTGGGGTACCCAATAGGCAATTaGCGTGTAGCGGTCAATCTCGTGTGTCACAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRQGVLGYPIGN*RVAVNLVCHSA Trigger: TGCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGTACCCCAGAACGCCCTGCCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS TCA 72 bp | ACCTCTGCCACAGGCAAACCTCTGGACACTGGGATTTaGCCTTCAAGCTTCGGGCTCACTTCCCGCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSATGKPLDTGI*PSSFGLTSRIN Trigger: GTTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGGCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS TCA 72 bp | ACGTGTTGGGCTTGCCAAACTCCAGGGGCTTCAGTGTaGATACCTCTGCCACAGGCAAACCTCTGGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: TCWACQTPGASV*IPLPQANLWTL Trigger: CAGTGTCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACTGAAGCCCCTGGAGTTTGGCAAGCCCAACACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CAA 90 bp | CTAGGAGATCCGAAGGCAGGGCGTTCTGGGGTACCCAATAGGCAATaGCCGTGTAGCGGTCAATCTCGTGTGTCACAGTGCAGGAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGDPKAGRSGVPNRQ*PCSGQSRVSQCRSK Trigger: TTTACTCCTGCACTGTGACACACGAGATTGACCGCTACACGGCAATTGCCTATTGGGTACCCCAGAACGCCCTGCCTTCGGATCTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS GCA 72 bp | CCTATGTTGGGAATCCCGTCCTGGCAGAATAGAGTGTaGCGGAATGTGTGGTTCTGTGGGTCATCCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PMLGIPSWQNRV*RNVWFCGSSQN Trigger: GTTCTGGGATGACCCACAGAACCACACATTCCGGCACACTCTATTCTGCCAGGACGGGATTCCCAACATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CCA 72 bp | TGTGAATACCTCTGCCACAGGCAAACCTCTGGACACTaGGATTTGACCTTCAAGCTTCGGGCTCACTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CEYLCHRQTSGH*DLTFKLRAHFP Trigger: CGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGGCAGAGGTATTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||
| CDS CAA 90 bp | CAGTGTGAATACCTCTGCCACAGGCAAACCTCTGGACACTGGGATTaGACCTTCAAGCTTCGGGCTCACTTCCCGCATCAACATCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QCEYLCHRQTSGHWD*TFKLRAHFPHQHLA Trigger: TGCGAGATGTTGATGCGGGAAGTGAGCCCGAAGCTTGAAGGTCAAATCCCAGTGTCCAGAGGTTTGCCTGTGGCAGAGGTATTCACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042121.11 ENSMUST00000236322.2 |
||