RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for H1F9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038994

Ensembl transcript IDs: ENSMUST00000038928.7

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGCATCTCTTGGCCCTGTaGTTGGACTTGAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLHLLAL*LDLRAR
Trigger: GCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATG...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR GCA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGTTGGGACCCACAGTGTaGCGGCATCTTGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLLGPTV*RHLGLQ
Trigger: CTGGAGACCAAGATGCCGGCACACTGTGGGTCCCAA...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR TCA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGGCAGGCTTTGGGTACTaGTGTCGGACTCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLAGFGY*CRTQFD
Trigger: GTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGC...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR TCA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGAGCAGGTCACATGCATaGTCATGCCTTTATCGAGTA +
Preference number: 4 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLSRSHA*SCLYRV
Trigger: TACTCGATAAAGGCATGATCATGCATGTGACCTGCT...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CCA 90 bp GAAATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACACTCCTTTGAAAAGCTaGTCATTCTTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EISCVLFPLGGKPGTPPDTPLKS*SFFFLE
Trigger: CTCCAAAAAGAAGAATGACCAGCTTTTCAAAGGAGT...GTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS TCA 90 bp GGCTCTTCTGTCTGTCCTGGCATCTCTTGGCCCTGTGGTTGGACTTaGGGGCCCGCTCCTTGCACAGGCAGAGGGAGCCGGAGGCACCCT +
Preference number: 5 (lower is better)
Translates to: GSSVCPGISWPCGWT*GPAPCTGRGSRRHP
Trigger: AGGGTGCCTCCGGCTCCCTCTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGACAGAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGTTGAGGGCCCGCTCCTaGCACAGGCAGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLLRARS*HRQREP
Trigger: CGGCTCCCTCTGCCTGTGCAAGGAGCGGGCCCTCAA...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGGAGCCGGAGGCACCCTaGCAGCAGGTCACATGCATG +
Preference number: 5 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLEPEAP*QQVTCM
Trigger: CATGCATGTGACCTGCTGCAAGGGTGCCTCCGGCTC...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS TCA 90 bp ATGGTGGGCTTCCGCAGGCTTTGGGTACTGATGTCGGACTCAGTTTaGCTCTCACTCTGGCTTGGGACCCACAGTGTGCCGGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: MVGFRRLWVLMSDSV*LSLWLGTHSVPASW
Trigger: CCAAGATGCCGGCACACTGTGGGTCCCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGCGGAAGCCCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS TCA 90 bp CTTAGTAGCAATTGGCATGGTTCAGACTCACGCTGCCCAGGCTTCTaGGGCTTCTGGCTCTTCTGTCTGTCCTGGCATCTCTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LSSNWHGSDSRCPGF*GFWLFCLSWHLLAL
Trigger: CAGGGCCAAGAGATGCCAGGACAGACAGAAGAGCCAGAAGCCTCAGAAGCCTGGGCAGCGTGAGTCTGAACCATGCCAATTGCTACTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS GCA 90 bp TTGCACAGGCAGAGGGAGCCGGAGGCACCCTTGCAGCAGGTCACATaGATGATCATGCCTTTATCGAGTAGATTCTGGAGCACACGCTTG +
Preference number: 5 (lower is better)
Translates to: LHRQREPEAPLQQVT*MIMPLSSRFWSTRL
Trigger: CAAGCGTGTGCTCCAGAATCTACTCGATAAAGGCATGATCATGCATGTGACCTGCTGCAAGGGTGCCTCCGGCTCCCTCTGCCTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 90 bp GCTTTGGGTACTGATGTCGGACTCAGTTTGACTCTCACTCTGGCTTaGGACCCACAGTGTGCCGGCATCTTGGTCTCCAGCCACCATTTG +
Preference number: 5 (lower is better)
Translates to: ALGTDVGLSLTLTLA*DPQCAGILVSSHHL
Trigger: CAAATGGTGGCTGGAGACCAAGATGCCGGCACACTGTGGGTCCCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp GAAATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGTCCTGGCATCTCTaGGCCCTGTGGTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: EISCVLFPLGGKPGTPPDLSWHL*ALWLDL
Trigger: CAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAG...GTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGGATGTCGGACTCAGTTaGACTCTCACTCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLDVGLS*TLTLAW
Trigger: CCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATC...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGCAATTATGTACCCGCTaGTCAGCCAAAGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLQLCTR*SAKVFR
Trigger: TCTGAAGACTTTGGCTGACAAGCGGGTACATAATTG...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp GAAATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACACCCTACGGACTCCTTaGAAAAGCTGGTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: EISCVLFPLGGKPGTPPDTLRTP*KSWSFF
Trigger: GAAGAATGACCAGCTTTTCAAAGGAGTCCGTAGGGT...GTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS-3UTR CAA 90 bp ATAAGTTGCGTTTTATTCCCACTTGGTGGCAAGCCTGGCACCCCGCCTGACCTGTGGTCATTCTTCTTTTaGGAGCTTAGTAGCAATTGG +
Preference number: 5 (lower is better)
Translates to: ISCVLFPLGGKPGTPPDLWSFFF*ELSSNW
Trigger: CCAATTGCTACTAAGCTCCAAAAAGAAGAATGACCA...CAGGTCAGGCGGGGTGCCAGGCTTGCCACCAAGTGGGAATAAAACGCAACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 90 bp CAATGGCGGTTGCCTTTGGCCACCCTACGGACTCCTTTGAAAAGCTaGTCATTCTTCTTTTTGGAGCTTAGTAGCAATTGGCATGGTTCA +
Preference number: 5 (lower is better)
Translates to: QWRLPLATLRTPLKS*SFFFLELSSNWHGS
Trigger: TGAACCATGCCAATTGCTACTAAGCTCCAAAAAGAAGAATGACCAGCTTTTCAAAGGAGTCCGTAGGGTGGCCAAAGGCAACCGCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 90 bp TTATCGAGTAGATTCTGGAGCACACGCTTGAAGCGCCAGGTGTTATaGGTCATATTGTACCCTGTGATAGACACAGCTTTCTTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: LSSRFWSTRLKRQVL*VILYPVIDTAFFKV
Trigger: TACCTTGAAGAAAGCTGTGTCTATCACAGGGTACAATATGACCCATAACACCTGGCGCTTCAAGCGTGTGCTCCAGAATCTACTCGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS TCA 72 bp GTCTGTCCTGGCATCTCTTGGCCCTGTGGTTGGACTTaGGGGCCCGCTCCTTGCACAGGCAGAGGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: VCPGISWPCGWT*GPAPCTGRGSR
Trigger: CCGGCTCCCTCTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 90 bp TGGCTCTTCTGTCTGTCCTGGCATCTCTTGGCCCTGTGGTTGGACTaGAGGGCCCGCTCCTTGCACAGGCAGAGGGAGCCGGAGGCACCC +
Preference number: 6 (lower is better)
Translates to: WLFCLSWHLLALWLD*RARSLHRQREPEAP
Trigger: GGGTGCCTCCGGCTCCCTCTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGACAGAAGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 72 bp TGTCTGTCCTGGCATCTCTTGGCCCTGTGGTTGGACTaGAGGGCCCGCTCCTTGCACAGGCAGAGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: CLSWHLLALWLD*RARSLHRQREP
Trigger: CGGCTCCCTCTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 90 bp GGCTTCTGGCTCTTCTGTCTGTCCTGGCATCTCTTGGCCCTGTGGTaGGACTTGAGGGCCCGCTCCTTGCACAGGCAGAGGGAGCCGGAG +
Preference number: 6 (lower is better)
Translates to: GFWLFCLSWHLLALW*DLRARSLHRQREPE
Trigger: CTCCGGCTCCCTCTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGACAGAAGAGCCAGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 72 bp TGGCTCTTCTGTCTGTCCTGGCATCTCTTGGCCCTGTaGTTGGACTTGAGGGCCCGCTCCTTGCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: WLFCLSWHLLAL*LDLRARSLHRQ
Trigger: CTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGACAGAAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 72 bp CTCTTCTGTCTGTCCTGGCATCTCTTGGCCCTGTGGTaGGACTTGAGGGCCCGCTCCTTGCACAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LFCLSWHLLALW*DLRARSLHRQR
Trigger: CCTCTGCCTGTGCAAGGAGCGGGCCCTCAAGTCCAACCACAGGGCCAAGAGATGCCAGGACAGACAGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 90 bp CATGGTGGGCTTCCGCAGGCTTTGGGTACTGATGTCGGACTCAGTTaGACTCTCACTCTGGCTTGGGACCCACAGTGTGCCGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: HGGLPQALGTDVGLS*TLTLAWDPQCAGIL
Trigger: CAAGATGCCGGCACACTGTGGGTCCCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGCGGAAGCCCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS GCA 72 bp CAGTTTGACTCTCACTCTGGCTTGGGACCCACAGTGTaGCGGCATCTTGGTCTCCAGCCACCATTTGAGCCA +
Preference number: 6 (lower is better)
Translates to: QFDSHSGLGPTV*RHLGLQPPFEP
Trigger: TGGCTCAAATGGTGGCTGGAGACCAAGATGCCGGCACACTGTGGGTCCCAAGCCAGAGTGAGAGTCAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 72 bp ACTGATGTCGGACTCAGTTTGACTCTCACTCTGGCTTaGGACCCACAGTGTGCCGGCATCTTGGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TDVGLSLTLTLA*DPQCAGILVSS
Trigger: GCTGGAGACCAAGATGCCGGCACACTGTGGGTCCCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 72 bp CTTCCGCAGGCTTTGGGTACTGATGTCGGACTCAGTTaGACTCTCACTCTGGCTTGGGACCCACAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: LPQALGTDVGLS*TLTLAWDPQCA
Trigger: GGCACACTGTGGGTCCCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS TCA 72 bp CATACGACATGGTGGGCTTCCGCAGGCTTTGGGTACTaGTGTCGGACTCAGTTTGACTCTCACTCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: HTTWWASAGFGY*CRTQFDSHSGL
Trigger: CAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGCGGAAGCCCACCATGTCGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 90 bp CAAAGTCTTCAGAATCACATACGACATGGTGGGCTTCCGCAGGCTTaGGGTACTGATGTCGGACTCAGTTTGACTCTCACTCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: QSLQNHIRHGGLPQA*GTDVGLSLTLTLAW
Trigger: CCAAGCCAGAGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGCGGAAGCCCACCATGTCGTATGTGATTCTGAAGACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 72 bp CAGAATCACATACGACATGGTGGGCTTCCGCAGGCTTaGGGTACTGATGTCGGACTCAGTTTGACTCTCACT +
Preference number: 6 (lower is better)
Translates to: QNHIRHGGLPQA*GTDVGLSLTLT
Trigger: AGTGAGAGTCAAACTGAGTCCGACATCAGTACCCAAAGCCTGCGGAAGCCCACCATGTCGTATGTGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 90 bp AGATTCTGGAGCACACGCTTGAAGCGCCAGGTGTTATGGGTCATATaGTACCCTGTGATAGACACAGCTTTCTTCAAGGTAGCAAGGGAC +
Preference number: 6 (lower is better)
Translates to: RFWSTRLKRQVLWVI*YPVIDTAFFKVARD
Trigger: GTCCCTTGCTACCTTGAAGAAAGCTGTGTCTATCACAGGGTACAATATGACCCATAACACCTGGCGCTTCAAGCGTGTGCTCCAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 90 bp TTGGCCACCCTACGGACTCCTTTGAAAAGCTGGTCATTCTTCTTTTaGGAGCTTAGTAGCAATTGGCATGGTTCAGACTCACGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LATLRTPLKSWSFFF*ELSSNWHGSDSRCP
Trigger: TGGGCAGCGTGAGTCTGAACCATGCCAATTGCTACTAAGCTCCAAAAAGAAGAATGACCAGCTTTTCAAAGGAGTCCGTAGGGTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 72 bp AGATTCTGGAGCACACGCTTGAAGCGCCAGGTGTTATaGGTCATATTGTACCCTGTGATAGACACAGCTTTC +
Preference number: 6 (lower is better)
Translates to: RFWSTRLKRQVL*VILYPVIDTAF
Trigger: GAAAGCTGTGTCTATCACAGGGTACAATATGACCCATAACACCTGGCGCTTCAAGCGTGTGCTCCAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 72 bp AGCACACGCTTGAAGCGCCAGGTGTTATGGGTCATATaGTACCCTGTGATAGACACAGCTTTCTTCAAGGTA +
Preference number: 6 (lower is better)
Translates to: STRLKRQVLWVI*YPVIDTAFFKV
Trigger: TACCTTGAAGAAAGCTGTGTCTATCACAGGGTACAATATGACCCATAACACCTGGCGCTTCAAGCGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CCA 72 bp TTGCCTTTGGCCACCCTACGGACTCCTTTGAAAAGCTaGTCATTCTTCTTTTTGGAGCTTAGTAGCAATTGG +
Preference number: 6 (lower is better)
Translates to: LPLATLRTPLKS*SFFFLELSSNW
Trigger: CCAATTGCTACTAAGCTCCAAAAAGAAGAATGACCAGCTTTTCAAAGGAGTCCGTAGGGTGGCCAAAGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7
CDS CAA 72 bp TTCAAGGTAGCAAGGGACACACAATTATGTACCCGCTaGTCAGCCAAAGTCTTCAGAATCACATACGACATG +
Preference number: 6 (lower is better)
Translates to: FKVARDTQLCTR*SAKVFRITYDM
Trigger: CATGTCGTATGTGATTCTGAAGACTTTGGCTGACAAGCGGGTACATAATTGTGTGTCCCTTGCTACCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038928.7