Pregenerated sensors for H1F8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042279Ensembl transcript IDs: ENSMUST00000037831.14, ENSMUST00000161617.7, ENSMUST00000161969.4, ENSMUST00000162084.8, ENSMUST00000205177.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGGCCTGGTGAGGAGGCCTCGACGAACGCCAGTTTCCAGAGCTTaGTTCAACAGGTACTTGAAACGGGTGGTGTCCACTGTCGGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: AGLVRRPRRTPVSRA*FNRYLKRVVSTVGY Trigger: GTACCCGACAGTGGACACCACCCGTTTCAAGTACCTGTTGAAGCAAGCTCTGGAAACTGGCGTTCGTCGAGGCCTCCTCACCAGGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 90 bp | CCATGGGCATTTGCTTCTTGCCTGCTCCCACTGCGTTTGACCTTCTaGCCTCCATTGGCAGTCAGAGGGGCCCCTGCTGCTTTGTCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: PWAFASCLLPLRLTF*PPLAVRGAPAALSC Trigger: ACAAGACAAAGCAGCAGGGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 90 bp | CTTGGTCTTTCTTCAGCAATCCAGATTTCTTGGAGCCTGTCTCCTTaGCACCTGCAGCTCCCCTGCCGGCTTTGGGGGCACAGGCTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: LGLSSAIQISWSLSP*HLQLPCRLWGHRLS Trigger: AGAAAGCCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAAGAAAGACCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR TCA 90 bp | TCTTGCTGGGAGCCTTGGAGGAGGTCTTGGGAAGTAACTCAGGCCTaGGTGTTCTCAGGGGTCTTTGCCTTCCTGACCCTAGGTATGGGT | + |
|
Preference number: 1 (lower is better) Translates to: SCWEPWRRSWEVTQA*VFSGVFAFLTLGMG Trigger: ACCCATACCTAGGGTCAGGAAGGCAAAGACCCCTGAGAACACTCAGGCCTGAGTTACTTCCCAAGACCTCCTCCAAGGCTCCCAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR GCA 90 bp | CTGCCATCTTCCTTTTGGCGAGGGAAGCAACGCTATTCTGGACCTTaGTGGCCAAGGGCTTCGATTTCTCACCTTTGGTTTTCCCATGGG | + |
|
Preference number: 1 (lower is better) Translates to: LPSSFWRGKQRYSGP*WPRASISHLWFSHG Trigger: CCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR GCA 90 bp | TACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTaGCATCTTCCTTTTGGCGAGGGAAGCAACGCTATTCTGGACCTT | + |
|
Preference number: 1 (lower is better) Translates to: YCLSPLNNCHSVGHV*HLPFGEGSNAILDL Trigger: AAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 90 bp | CCATCTTCCTTTTGGCGAGGGAAGCAACGCTATTCTGGACCTTGCTaGCCAAGGGCTTCGATTTCTCACCTTTGGTTTTCCCATGGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: PSSFWRGKQRYSGPC*PRASISHLWFSHGH Trigger: ATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 90 bp | TGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACTTTaGTCTCCTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: WVVLCVLCPGKEWAL*SPVLSQPPEQLSQC Trigger: ACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAGGAGACCAAAGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTGGCACCTGCAGCTCCCCTGCCGGCTTTGGGGGCACAGGCTTTCTTTGTCCCCTTGGCCTTGGAGTaGGCAGGCCTGGTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLAPAAPLPALGAQAFFVPLALE*AGLVRR Trigger: CCTCCTCACCAGGCCTGCTCACTCCAAGGCCAAGGG...GACAAAGAAAGCCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGTTTCGCCTTGGCTTTCTTAGGTGCCATCTCCAGTGTGGCTGCCTTGCAAGGTGGCTACAACTGATGTaGCCTGGCGTGCCTCCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: RFRLGFLRCHLQCGCLARWLQLM*PGVPPG Trigger: CCCGGGAGGCACGCCAGGGCACATCAGTTGTAGCCA...CCTTGCAAGGCAGCCACACTGGAGATGGCACCTAAGAAAGCCAAGGCGAAACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CAA 90 bp | AGCAGGCCTGGTGAGGAGGCCTCGACGAACGCCAGTTTCCAGAGCTaGCTTCAACAGGTACTTGAAACGGGTGGTGTCCACTGTCGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SRPGEEASTNASFQS*LQQVLETGGVHCRV Trigger: TACCCGACAGTGGACACCACCCGTTTCAAGTACCTGTTGAAGCAAGCTCTGGAAACTGGCGTTCGTCGAGGCCTCCTCACCAGGCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGTTTCGCCTTGGCTTTCTTAGGTGCCATCTCCAGTGTGGCTGCCTTGCAAGGCCTCAGCCTTCTTGCTaGGAGCCTTGGAGGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RFRLGFLRCHLQCGCLARPQPSC*EPWRRS Trigger: AGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGG...CCTTGCAAGGCAGCCACACTGGAGATGGCACCTAAGAAAGCCAAGGCGAAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CAA 90 bp | ACTTGGTCTTTCTTCAGCAATCCAGATTTCTTGGAGCCTGTCTCCTaGGCACCTGCAGCTCCCCTGCCGGCTTTGGGGGCACAGGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TWSFFSNPDFLEPVS*APAAPLPALGAQAF Trigger: GAAAGCCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAAGAAAGACCAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CAA 90 bp | ATCGTGGCCTTGCCAACTTGGTCTTTCTTCAGCAATCCAGATTTCTaGGAGCCTGTCTCCTTGGCACCTGCAGCTCCCCTGCCGGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: IVALPTWSFFSNPDF*EPVSLAPAAPLPAL Trigger: CAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACCCTCAGCCTTCTTGCTaGGAGCCTTGGAGGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: DPRYGLYFVSYVLGRSGHPQPSC*EPWRRS Trigger: AGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGG...GTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCAATCCAGATTTCTTGGAGCCTGTCTCCTTGGCACCTGCAGCTCCCCTGTGGGTTCCTTTGGCCTaGTTGGATTCTGCGGCAACT | + |
|
Preference number: 2 (lower is better) Translates to: FSNPDFLEPVSLAPAAPLWVPLA*LDSAAT Trigger: AGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCA...CAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGCCTTTCTGACCTCTTTCGGTTTCGCCTTGGCTTTCTTAGGTGCCATCTCGCTTTGGAACTAGTTTaGAGCTGCCAGTGGCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: GSLSDLFRFRLGFLRCHLALELV*SCQWHP Trigger: AGGGTGCCACTGGCAGCTTCAAACTAGTTCCAAAGC...GAGATGGCACCTAAGAAAGCCAAGGCGAAACCGAAAGAGGTCAGAAAGGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCGACGAACGCCAGTTTCCAGAGCTTGCTTCAACAGGTACTTGAAACGGGTGGGCCTGCTTGGATTCTaGGGCAACTTGGACCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: PRRTPVSRACFNRYLKRVGLLGF*GNLDLL Trigger: TAACAGGTCCAAGTTGCCGCAGAATCCAAGCAGGCC...CACCCGTTTCAAGTACCTGTTGAAGCAAGCTCTGGAAACTGGCGTTCGTCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTCCTCAGCCTTCTTGCTaGGAGCCTTGGAGGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LDNKSFRIAISPALALATPQPSC*EPWRRS Trigger: AGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGG...AGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR CAA 90 bp | TTCTCAGGGGTCTTTGCCTTCCTGACCCTAGGTATGGGTTGTACTTaGTGTCCTATGTCCTGGGAAGGAGTGGGCACTTTGGTCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FSGVFAFLTLGMGCT*CPMSWEGVGTLVSC Trigger: ACAGGAGACCAAAGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTCAGGAAGGCAAAGACCCCTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR CAA 90 bp | GTAAGCCCTCCTCTTCTGCCCTTTCTCCATCGTGGCCTTGCCAACTaGGTCTTTCTTCAGCAATCCAGATTTCTTGGAGCCTGTCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VSPPLLPFLHRGLAN*VFLQQSRFLGACLL Trigger: AAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCACGATGGAGAAAGGGCAGAAGAGGAGGGCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGCCTCAGCCTTCTTGCTaGGAGCCTTGGAGGAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CDSLLDNKSFRIAISPALPQPSC*EPWRRS Trigger: AGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGG...CAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR TCA 72 bp | CAGTGGCACCCTTGGCCTTGGAGTGAGCAGGCCTGGTaGGGAGGCCTCGACGAACGCCAGTTTCCAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QWHPWPWSEQAW*GGLDERQFPEL Trigger: AAGCTCTGGAAACTGGCGTTCGTCGAGGCCTCCTCACCAGGCCTGCTCACTCCAAGGCCAAGGGTGCCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR TCA 72 bp | CATGGGCATTTGCTTCTTGCCTGCTCCCACTGCGTTTaGCCTTCTGGCCTCCATTGGCAGTCAGAGGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HGHLLLACSHCV*PSGLHWQSEGP Trigger: GGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR GCA 72 bp | CAATCCAGATTTCTTGGAGCCTGTCTCCTTGGCACCTaGAGCTCCCCTGCCGGCTTTGGGGGCACAGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QSRFLGACLLGT*SSPAGFGGTGF Trigger: AAAGCCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | CTGTCTCCTTGGCACCTGCAGCTCCCCTGCCGGCTTTaGGGGCACAGGCTTTCTTTGTCTTGGGCTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSPWHLQLPCRL*GHRLSLSWALE Trigger: TTCCAAAGCCCAAGACAAAGAAAGCCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | TCTTCAGCAATCCAGATTTCTTGGAGCCTGTCTCCTTaGCACCTGCAGCTCCCCTGCCGGCTTTGGGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSAIQISWSLSP*HLQLPCRLWGH Trigger: GTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCTAGCCTCAGCCTTCTaGCTGGGAGCCTTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PDPRYGLYFVSYVLGRSGLASAF*LGALEE Trigger: CTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAG...CCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR TCA 72 bp | GTGGGCACTTTGGTCTCCTGTACTGTCTCAGCCCCCTaGACAACTGTCACAGTGTGGGCCATGTCTGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VGTLVSCTVSAP*TTVTVWAMSAI Trigger: GATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAGGAGACCAAAGTGCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR GCA 72 bp | CGTGCCTCCCGGGCCTTCAAAGCCTCTAGCACCATGTaGAGCATTGTTGGGTTCCTTTGGCCTGCTTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: RASRAFKASSTM*SIVGFLWPAWI Trigger: AATCCAAGCAGGCCAAAGGAACCCAACAATGCTGCACATGGTGCTAGAGGCTTTGAAGGCCCGGGAGGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | TGGGTTCCTTTGGCCTGCTTGGATTCTGCGGCAACTTaGACCTGTTACCCCAGGACTCCAGACACAGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WVPLACLDSAAT*TCYPRTPDTEV Trigger: CACCTCTGTGTCTGGAGTCCTGGGGTAACAGGTCCAAGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCTTTCTCCATCGTGGCCTTGCCAACTTGGTCTTTCTTCAGCAATCCAGACTAGCCTCAGCCTTCTaGCTGGGAGCCTTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPFLHRGLANLVFLQQSRLASAF*LGALEE Trigger: CTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAG...TCTGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCACGATGGAGAAAGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR TCA 72 bp | GTACTTGTGTTGGATGTAGACCTTGATGGCTACAACTaGTGTGCCCTGGCGTGCCTCCCGGGCCTTCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLVLDVDLDGYN*CALACLPGLQS Trigger: GCTTTGAAGGCCCGGGAGGCACGCCAGGGCACATCAGTTGTAGCCATCAAGGTCTACATCCAACACAAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR GCA 72 bp | GCAGCATTGTTGGGTTCCTTTGGCCTGCTTGGATTCTaGGGCAACTTGGACCTGTTACCCCAGGACTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AALLGSFGLLGF*GNLDLLPQDSR Trigger: TCTGGAGTCCTGGGGTAACAGGTCCAAGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCAACAATGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR GCA 72 bp | GTGAGGAGGCCTCGACGAACGCCAGTTTCCAGAGCTTaGTTCAACAGGTACTTGAAACGGGTGGTGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: VRRPRRTPVSRA*FNRYLKRVVST Trigger: AGTGGACACCACCCGTTTCAAGTACCTGTTGAAGCAAGCTCTGGAAACTGGCGTTCGTCGAGGCCTCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | CTGTCACAGTGTGGGCCATGTCTGCCATCTTCCTTTTaGCGAGGGAAGCAACGCTATTCTGGACCTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSQCGPCLPSSF*RGKQRYSGPCW Trigger: CCAGCAAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR GCA 72 bp | AGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTaGCATCTTCCTTTTGGCGAGGGAAGCAACGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: SPLNNCHSVGHV*HLPFGEGSNAI Trigger: AATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | GGACCTTGCTGGCCAAGGGCTTCGATTTCTCACCTTTaGTTTTCCCATGGGCATTTGCTTCTTGCCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GPCWPRASISHL*FSHGHLLLACS Trigger: GGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | CTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACTTTaGTCTCCTGTACTGTCTCAGCCCCCTGAACAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LCVLCPGKEWAL*SPVLSQPPEQL Trigger: CAGTTGTTCAGGGGGCTGAGACAGTACAGGAGACCAAAGTGCCCACTCCTTCCCAGGACATAGGACACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR GCA 72 bp | TTCTCACCTTTGGTTTTCCCATGGGCATTTGCTTCTTaGCTGCTCCCACTGCGTTTGACCTTCTGGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSPLVFPWAFAS*LLPLRLTFWPP Trigger: TGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | GCCAAGGGCTTCGATTTCTCACCTTTGGTTTTCCCATaGGCATTTGCTTCTTGCCTGCTCCCACTGCGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AKGFDFSPLVFP*AFASCLLPLRL Trigger: CAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGCCTTTCTGACCTCTTTCGGTTTCGCCTTGGCTTTCTTAGGTGCCATCTCTGCTTCAACAGGTACTaGAAACGGGTGGTGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GSLSDLFRFRLGFLRCHLCFNRY*KRVVST Trigger: AGTGGACACCACCCGTTTCAAGTACCTGTTGAAGCA...GAGATGGCACCTAAGAAAGCCAAGGCGAAACCGAAAGAGGTCAGAAAGGCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR GCA 72 bp | TCCTTTTGGCGAGGGAAGCAACGCTATTCTGGACCTTaGTGGCCAAGGGCTTCGATTTCTCACCTTTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SFWRGKQRYSGP*WPRASISHLWF Trigger: AAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | TTTTGGCGAGGGAAGCAACGCTATTCTGGACCTTGCTaGCCAAGGGCTTCGATTTCTCACCTTTGGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FWRGKQRYSGPC*PRASISHLWFS Trigger: GGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | ACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTaGGAAGGAGTGGGCACTTTGGTCTCCTGTACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLGMGCTLCPMS*EGVGTLVSCTV Trigger: GACAGTACAGGAGACCAAAGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| 3UTR GCA 72 bp | AAGCCCTCCTCTTCTGCCCTTTCTCCATCGTGGCCTTaGCAACTTGGTCTTTCTTCAGCAATCCAGATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KPSSSALSPSWP*QLGLSSAIQIS Trigger: AGAAATCTGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCACGATGGAGAAAGGGCAGAAGAGGAGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CCA 72 bp | CTCTTCTGCCCTTTCTCCATCGTGGCCTTGCCAACTTaGTCTTTCTTCAGCAATCCAGATTTCTTGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFCPFSIVALPT*SFFSNPDFLEP Trigger: AGGCTCCAAGAAATCTGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCACGATGGAGAAAGGGCAGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTCACCTGCAGCTCCCCTaGCGGCTTTGGGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISPALALATSLSLLAGSLHLQLP*RLWGHR Trigger: CCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTG...AAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTTGTCTCCTTGGCACCTaGAGCTCCCCTGCCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALALATSLSLLAGSLGGGCLLGT*SSPAGF Trigger: AAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACA...ACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTTGCTCCCACTGCGTTTaGCCTTCTGGCCTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALALATSLSLLAGSLGGGCSHCV*PSGLHW Trigger: CCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCA...ACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| 3UTR CAA 72 bp | CCTGTCTCCTTGGCACCTGCAGCTCCCCTGCCGGCTTaGGGGGCACAGGCTTTCTTTGTCTTGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSLAPAAPLPA*GAQAFFVLGFG Trigger: TCCAAAGCCCAAGACAAAGAAAGCCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTCTCCTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATCACCTGCAGCTCCCCTaGCGGCTTTGGGGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FGLLYCLSPLNNCHSVGHHLQLP*RLWGHR Trigger: CCTGTGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTG...ATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAGGAGACCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| 3UTR CAA 72 bp | TGCCTGCTCCCACTGCGTTTGACCTTCTGGCCTCCATaGGCAGTCAGAGGGGCCCCTGCTGCTTTGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLPLRLTFWPP*AVRGAPAALSC Trigger: ACAAGACAAAGCAGCAGGGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CAA 72 bp | CCATGGGCATTTGCTTCTTGCCTGCTCCCACTGCGTTaGACCTTCTGGCCTCCATTGGCAGTCAGAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PWAFASCLLPLR*TFWPPLAVRGA Trigger: GGCCCCTCTGACTGCCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACCCCTTGGCCTTGGAGTaGGCAGGCCTGGTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPRYGLYFVSYVLGRSGHPLALE*AGLVRR Trigger: CCTCCTCACCAGGCCTGCTCACTCCAAGGCCAAGGG...GTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | AGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCCAGTGTGGCTGCCTTaGAAGGGTAAGCCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRIAISPALALATSLSLPVWLP*KGKPSS Trigger: AGAGGAGGGCTTACCCTTGCAAGGCAGCCACACTGG...AAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTAGTGTGGGCCATGTCTaGCATCTTCCTTTTGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALALATSLSLLAGSLGGGSVGHV*HLPFGE Trigger: CTCGCCAAAAGGAAGATGGCAGACATGGCCCACACT...ACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| CDS-3UTR TCA 90 bp | ATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTTTAGGGGAGCCTTTCTaGCCTCTTTCGGTTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPALALATSLSLLAGSLLGEPF*PLSVSP Trigger: AGGCGAAACCGAAAGAGGTCAGAAAGGCTCCCCTAA...AAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTACTGTCTCAGCCCCCTaGACAACTGTCACAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LALATSLSLLAGSLGGGLTVSAP*TTVTVW Trigger: CCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGT...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTAAGGAGTGGGCACTTTaGTCTCCTGTACTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALALATSLSLLAGSLGGGKEWAL*SPVLSQ Trigger: CTGAGACAGTACAGGAGACCAAAGTGCCCACTCCTT...ACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| 3UTR CAA 72 bp | TTCTTCAGCAATCCAGATTTCTTGGAGCCTGTCTCCTaGGCACCTGCAGCTCCCCTGCCGGCTTTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFSNPDFLEPVS*APAAPLPALGA Trigger: TGCCCCCAAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAAGAAATCTGGATTGCTGAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTGCTTTGGAACTAGTTTaGAGCTGCCAGTGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALATSLSLLAGSLGGGLALELV*SCQWHP Trigger: AGGGTGCCACTGGCAGCTTCAAACTAGTTCCAAAGC...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTCTTGGCTTTCTTAGGTaGCATCTCCAGTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LALATSLSLLAGSLGGGLLGFLR*HLQCGC Trigger: GCAGCCACACTGGAGATGGCACCTAAGAAAGCCAAG...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTGCCCTTTCTCCATCGTaGCCTTGCCAACTTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LALATSLSLLAGSLGGGLALSPS*PCQLGL Trigger: AAGACCAAGTTGGCAAGGCCACGATGGAGAAAGGGC...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| 3UTR CAA 72 bp | GGTGAGGAGGCCTCGACGAACGCCAGTTTCCAGAGCTaGCTTCAACAGGTACTTGAAACGGGTGGTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEEASTNASFQS*LQQVLETGGVH Trigger: GTGGACACCACCCGTTTCAAGTACCTGTTGAAGCAAGCTCTGGAAACTGGCGTTCGTCGAGGCCTCCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCTGCTCCCACTGCGTTTaGCCTTCTGGCCTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKSFRIAISPALALATSLCSHCV*PSGLHW Trigger: CCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCA...GAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR TCA 90 bp | AACTGTCACAGTGTGGGCCATGTCTGCCATCTTCCTTTTGGCGAGGGAAGCAACTGCTCCCACTGCGTTTaGCCTTCTGGCCTCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NCHSVGHVCHLPFGEGSNCSHCV*PSGLHW Trigger: CCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCA...GTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCTGGCTACAACTGATGTaGCCTGGCGTGCCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSLLDNKSFRIAISPALAWLQLM*PGVPPG Trigger: CCCGGGAGGCACGCCAGGGCACATCAGTTGTAGCCA...GGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCGCTATTCTGGACCTTaGTGGCCAAGGGCTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: KSFRIAISPALALATSLSRYSGP*WPRASI Trigger: AATCGAAGCCCTTGGCCAGCAAGGTCCAGAATAGCG...GCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTAAGGGGATGTGTCCCTaGAGGGAAAAGAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRIAISPALALATSLSLLKGMCP*REKRRK Trigger: CTTCCTCCTCTTTTCCCTCCAGGGACACATCCCCTT...AAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000162084.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCATGTCTGCCATCTTCCTTTTGGCGAGGGAAGCAACGCTATTCTGGACCGGCTACAGAACGAGGTaGTACCTGGCTTGTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WAMSAIFLLAREATLFWTGYRTR*YLACQL Trigger: GAGCTGACAAGCCAGGTACCACCTCGTTCTGTAGCC...GGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CAA 72 bp | TTGGGTTCCTTTGGCCTGCTTGGATTCTGCGGCAACTaGGACCTGTTACCCCAGGACTCCAGACACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSFGLLGFCGN*DLLPQDSRHRG Trigger: ACCTCTGTGTCTGGAGTCCTGGGGTAACAGGTCCAAGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGCCCTTGGCCTTGGAGTaGGCAGGCCTGGTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDSLLDNKSFRIAISPALPLALE*AGLVRR Trigger: CCTCCTCACCAGGCCTGCTCACTCCAAGGCCAAGGG...CAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR TCA 90 bp | CCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTGCCATCTTCCTTTTGGCGAGCTTTGGAACTAGTTTaGAGCTGCCAGTGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPEQLSQCGPCLPSSFWRALELV*SCQWHP Trigger: AGGGTGCCACTGGCAGCTTCAAACTAGTTCCAAAGC...TCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | GACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCTGTCTCCTTGGCACCTaGAGCTCCCCTGCCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSLLDNKSFRIAISPALACLLGT*SSPAGF Trigger: AAAGCCGGCAGGGGAGCTGCAGGTGCCAAGGAGACA...GGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTTCTCCATCGTGGCCTTaGCAACTTGGTCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LALATSLSLLAGSLGGGLSPSWP*QLGLSS Trigger: TGAAGAAAGACCAAGTTGGCAAGGCCACGATGGAGA...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCCTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTTGGCTTTCTTAGGTaGCATCTCCAGTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPVLSQPPEQLSQCGPCLGFLR*HLQCGC Trigger: GCAGCCACACTGGAGATGGCACCTAAGAAAGCCAAG...ACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAGGAGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTGCCATCTTCCTTTTGGCGAAAGGGGATGTGTCCCTaGAGGGAAAAGAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPEQLSQCGPCLPSSFWRKGMCP*REKRRK Trigger: CTTCCTCCTCTTTTCCCTCCAGGGACACATCCCCTT...TCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTGTGGCCTTGCCAACTTaGTCTTTCTTCAGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LALATSLSLLAGSLGGGLVALPT*SFFSNP Trigger: TGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCAC...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| 3UTR CAA 72 bp | ACTGTCACAGTGTGGGCCATGTCTGCCATCTTCCTTTaGGCGAGGGAAGCAACGCTATTCTGGACCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVTVWAMSAIFL*AREATLFWTLL Trigger: CAGCAAGGTCCAGAATAGCGTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| 3UTR CAA 72 bp | CTCAGGGGTCTTTGCCTTCCTGACCCTAGGTATGGGTaGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGLCLPDPRYG*YFVSYVLGRSG Trigger: CCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTCAGGAAGGCAAAGACCCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTTCTCCATCGTGGCCTTaGCAACTTGGTCTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRIAISPALALATSLSLLSPSWP*QLGLSS Trigger: TGAAGAAAGACCAAGTTGGCAAGGCCACGATGGAGA...AAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | CTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTGCCATATTCTGGACCTACCTTaGTGGCCAAGGGCTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LYCLSPLNNCHSVGHVCHILDLP*WPRASI Trigger: AATCGAAGCCCTTGGCCAGCAAGGTAGGTCCAGAAT...ATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTTATTCTGGACCTTGCTaGCCAAGGGCTTCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRIAISPALALATSLSLLYSGPC*PRASIS Trigger: AGAAATCGAAGCCCTTGGCCAGCAAGGTCCAGAATA...AAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| 3UTR CAA 72 bp | TGGACCTTGCTGGCCAAGGGCTTCGATTTCTCACCTTaGGTTTTCCCATGGGCATTTGCTTCTTGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WTLLAKGFDFSP*VFPWAFASCLL Trigger: GAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCGCCTCTAGCACCATGTaGAGCATTGTTGGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKSFRIAISPALALATSLASSTM*SIVGFL Trigger: AAGGAACCCAACAATGCTGCACATGGTGCTAGAGGC...GAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | ACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACTCTTGGCTTTCTTAGGTaGCATCTCCAGTGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGMGCTLCPMSWEGVGTLGFLR*HLQCGC Trigger: GCAGCCACACTGGAGATGGCACCTAAGAAAGCCAAG...AGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACTGCCCTTTCTCCATCGTaGCCTTGCCAACTTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGMGCTLCPMSWEGVGTALSPS*PCQLGL Trigger: AAGACCAAGTTGGCAAGGCCACGATGGAGAAAGGGC...AGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | GACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCTGGGTTCCTTTGGCCTaGTTGGATTCTGCGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: DSLLDNKSFRIAISPALAWVPLA*LDSAAT Trigger: AGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCA...GGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CCA 90 bp | AACTGTCACAGTGTGGGCCATGTCTGCCATCTTCCTTTTGGCGAGGGAAGCAACGTGGCCTTGCCAACTTaGTCTTTCTTCAGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NCHSVGHVCHLPFGEGSNVALPT*SFFSNP Trigger: TGGATTGCTGAAGAAAGACCAAGTTGGCAAGGCCAC...GTTGCTTCCCTCGCCAAAAGGAAGATGGCAGACATGGCCCACACTGTGACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| 3UTR CAA 72 bp | GTCTTTGCCTTCCTGACCCTAGGTATGGGTTGTACTTaGTGTCCTATGTCCTGGGAAGGAGTGGGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFAFLTLGMGCT*CPMSWEGVGTL Trigger: CAAAGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTCAGGAAGGCAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161969.4 ENSMUST00000162084.8 ENSMUST00000205177.2 |
||
| CDS-3UTR GCA 90 bp | CATTGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCCAGTGTGGCTGCCTTaGAAGGGTAAGCCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCDSLLDNKSFRIAISPAPVWLP*KGKPSS Trigger: AGAGGAGGGCTTACCCTTGCAAGGCAGCCACACTGG...GGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | TGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGTGGGTTCCTTTGGCCTaGTTGGATTCTGCGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: CDSLLDNKSFRIAISPALWVPLA*LDSAAT Trigger: AGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCA...CAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR GCA 90 bp | TTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTGCCTCTAGCACCATGTaGAGCATTGTTGGGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKSFRIAISPALALAASSTM*SIVGFL Trigger: AAGGAACCCAACAATGCTGCACATGGTGCTAGAGGC...AGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CCA 90 bp | CATTGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCAAGGGGATGTGTCCCTaGAGGGAAAAGAGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCDSLLDNKSFRIAISPAKGMCP*REKRRK Trigger: CTTCCTCCTCTTTTCCCTCCAGGGACACATCCCCTT...GGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000162084.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCTGTCCTGGGAAGGAGTaGGCACTTTGGTCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HCDSLLDNKSFRIAISPACPGKE*ALWSPV Trigger: TACAGGAGACCAAAGTGCCCACTCCTTCCCAGGACA...GGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| CDS-3UTR GCA 90 bp | CATTGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCGTTCTCAGGGGTCTTTaGCTTCCTGACCCTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HCDSLLDNKSFRIAISPAVLRGL*LPDPRY Trigger: ATACCTAGGGTCAGGAAGGCAAAGACCCCTGAGAAC...GGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTGGAGGAGGTCTTACCTTCTGGCCTCCATaGGCAGTCAGAGGGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LALATSLSLLAGSLGGGLTFWPP*AVRGAP Trigger: AGGGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGT...AAGACCTCCTCCAAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTTTGGAGCCTGTCTCCTaGGCACCTGCAGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRIAISPALALATSLSLLLEPVS*APAAPL Trigger: CAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAA...AAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | CTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTGCCATACCTTCTGGCCTCCATaGGCAGTCAGAGGGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYCLSPLNNCHSVGHVCHTFWPP*AVRGAP Trigger: AGGGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGT...ATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCTTGGAGCCTGTCTCCTaGGCACCTGCAGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NKSFRIAISPALALATSLLEPVS*APAAPL Trigger: CAGGGGAGCTGCAGGTGCCAAGGAGACAGGCTCCAA...GAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGCTGGGAGCCTTTTTTCCCATGGGCATTaGCTTCTTGCCTGCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPALALATSLSLLAGSLFSHGH*LLACSH Trigger: GTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAA...AAGGCTCCCAGCAAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGAT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | AGTAACTCAGGCCTGAGTGTTCTCAGGGGTCTTTGCCTTCCTGACCCTAGGTATACCTTCTGGCCTCCATaGGCAGTCAGAGGGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SNSGLSVLRGLCLPDPRYTFWPP*AVRGAP Trigger: AGGGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGT...ATACCTAGGGTCAGGAAGGCAAAGACCCCTGAGAACACTCAGGCCTGAGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTATGGGCATTTGCTTCTaGCCTGCTCCCACTGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFRIAISPALALATSLSLMGICF*PAPTAF Trigger: AAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCAT...AAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTGGGCACAGGCTTTCTTaGTCTTGGGCTTTGGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: SFRIAISPALALATSLSLGHRLS*SWALEL Trigger: TAGTTCCAAAGCCCAAGACAAAGAAAGCCTGTGCCC...AAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | TTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTGAAGGAGTGGGCACTTaGGTCTCCTGTACTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRIAISPALALATSLSLLEGVGT*VSCTVS Trigger: TGAGACAGTACAGGAGACCAAAGTGCCCACTCCTTC...AAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037831.14 |
||
| CDS-3UTR CAA 90 bp | AAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCTGCTTCAACAGGTACTaGAAACGGGTGGTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KSFRIAISPALALATSLSCFNRY*KRVVST Trigger: AGTGGACACCACCCGTTTCAAGTACCTGTTGAAGCA...GCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | CTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTGCCATTTTTCCCATGGGCATTaGCTTCTTGCCTGCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYCLSPLNNCHSVGHVCHFSHGH*LLACSH Trigger: GTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAA...ATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCAGGCTTTCTTTGTCTaGGGCTTTGGAACTAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFRIAISPALALATSLSLQAFFV*GFGTSL Trigger: CAAACTAGTTCCAAAGCCCAAGACAAAGAAAGCCTG...AAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | GACCCTAGGTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACATGGGCATTTGCTTCTaGCCTGCTCCCACTGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DPRYGLYFVSYVLGRSGHMGICF*PAPTAF Trigger: AAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCAT...GTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATACCTAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS CCA 90 bp | ATTCTGGACCTACCTTGCTGGCCAAGGGCTTCGATTTCTCACCTTTaGTTTTCCCATGGGCATTTGCTTCTTGCCTGCTCCCACTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILDLPCWPRASISHL*FSHGHLLLACSHCV Trigger: AACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTAGGTCCAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | TTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTATGGGCATTTGCTTCTaGCCTGCTCCCACTGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LDNKSFRIAISPALALATMGICF*PAPTAF Trigger: AAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCAT...AGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGAATCGCCATCTCCCCAGCCCTGGCCCTAGCTACTAGCCTCAGCCTTCTTTTCGATTTCTCACCTTaGGTTTTCCCATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FRIAISPALALATSLSLLFDFSP*VFPWAF Trigger: AAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAA...AAGAAGGCTGAGGCTAGTAGCTAGGGCCAGGGCTGGGGAGATGGCGATTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | GTATGGGTTGTACTTTGTGTCCTATGTCCTGGGAAGGAGTGGGCACTTTGGTCTTGCTTCAACAGGTACTaGAAACGGGTGGTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VWVVLCVLCPGKEWALWSCFNRY*KRVVST Trigger: AGTGGACACCACCCGTTTCAAGTACCTGTTGAAGCA...AGACCAAAGTGCCCACTCCTTCCCAGGACATAGGACACAAAGTACAACCCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | CTGTACTGTCTCAGCCCCCTGAACAACTGTCACAGTGTGGGCCATGTCTGCCATTTCGATTTCTCACCTTaGGTTTTCCCATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LYCLSPLNNCHSVGHVCHFDFSP*VFPWAF Trigger: AAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAA...ATGGCAGACATGGCCCACACTGTGACAGTTGTTCAGGGGGCTGAGACAGTACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS-3UTR CAA 90 bp | CATTGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCTTTTCCCATGGGCATTaGCTTCTTGCCTGCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HCDSLLDNKSFRIAISPAFSHGH*LLACSH Trigger: GTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAA...GGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 ENSMUST00000205177.2 |
||
| CDS-3UTR CAA 90 bp | CATTGTGACAGCTTATTAGACAATAAAAGCTTCAGAATCGCCATCTCCCCAGCCCAGGCTTTCTTTGTCTaGGGCTTTGGAACTAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HCDSLLDNKSFRIAISPAQAFFV*GFGTSL Trigger: CAAACTAGTTCCAAAGCCCAAGACAAAGAAAGCCTG...GGCTGGGGAGATGGCGATTCTGAAGCTTTTATTGTCTAATAAGCTGTCACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037831.14 ENSMUST00000161969.4 |
||
| CDS TCA 72 bp | TCCCATGGGCATTTGCTTGCCTGCTCCCACTGCGTTTaGCCTTCTGGCCTCCATTGGCAGTCAGAGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHGHLLACSHCV*PSGLHWQSEGP Trigger: GGGCCCCTCTGACTGCCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGCAAATGCCCATGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161617.7 |
||
| CDS CAA 72 bp | TTCCCATGGGCATTTGCTTGCCTGCTCCCACTGCGTTaGACCTTCTGGCCTCCATTGGCAGTCAGAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPWAFACLLPLR*TFWPPLAVRGA Trigger: GGCCCCTCTGACTGCCAATGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGCAAATGCCCATGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161617.7 |
||
| CDS CAA 90 bp | TATTTCCAGATGAGCCTGGGGCTACAGAACGAGGTGGTACCTGGCTaGTCAGCTCCAGGGAGCCCACATGATCCAGAAGGGGATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: YFQMSLGLQNEVVPG*SAPGSPHDPEGDVS Trigger: GGACACATCCCCTTCTGGATCATGTGGGCTCCCTGGAGCTGACAAGCCAGGTACCACCTCGTTCTGTAGCCCCAGGCTCATCTGGAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162084.8 |
||
| CDS GCA 72 bp | GCAGCATTGTTGGGTTCCTTTGGCCTGCTTGGATTCTaGGGCAACTTGGACCTGGCTTGTCAGCTCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AALLGSFGLLGF*GNLDLACQLQG Trigger: TCCCTGGAGCTGACAAGCCAGGTCCAAGTTGCCGCAGAATCCAAGCAGGCCAAAGGAACCCAACAATGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037831.14 ENSMUST00000161617.7 ENSMUST00000161969.4 |
||
| CDS GCA 72 bp | TCTGGACCTTTGGTTTTCCCATGGGCATTTGCTTCTTaGCTGCTCCCACTGCGTTTGACCTTCTGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGPLVFPWAFAS*LLPLRLTFWPP Trigger: TGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205177.2 |
||
| CDS CCA 72 bp | GCCAAGGGCTTCGATTTCTCACCTTTGGTTTTCCCATaGGCATTTGCTTGCCTGCTCCCACTGCGTTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: AKGFDFSPLVFP*AFACLLPLRLT Trigger: GGTCAAACGCAGTGGGAGCAGGCAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161617.7 |
||
| CDS CAA 72 bp | CGATTTCTCACCTTTGGTTTTCCCATGGGCATTTGCTaGCCTGCTCCCACTGCGTTTGACCTTCTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFLTFGFPMGIC*PAPTAFDLLAS Trigger: GGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161617.7 |
||
| CDS CAA 72 bp | TTCTGGACCTTTGGTTTTCCCATGGGCATTTGCTTCTaGCCTGCTCCCACTGCGTTTGACCTTCTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWTFGFPMGICF*PAPTAFDLLAS Trigger: GGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205177.2 |
||
| CDS GCA 72 bp | GATTTCTCACCTTTGGTTTTCCCATGGGCATTTGCTTaGCTGCTCCCACTGCGTTTGACCTTCTGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DFSPLVFPWAFA*LLPLRLTFWPP Trigger: TGGAGGCCAGAAGGTCAAACGCAGTGGGAGCAGGCAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161617.7 |
||
| CDS CCA 72 bp | CTACCTTGCTGGCCAAGGGCTTCGATTTCTCACCTTTaGTTTTCCCATGGGCATTTGCTTCTTGCCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPCWPRASISHL*FSHGHLLLACS Trigger: GGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS CAA 72 bp | CCTACCTTGCTGGCCAAGGGCTTCGATTTCTCACCTTaGGTTTTCCCATGGGCATTTGCTTCTTGCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PTLLAKGFDFSP*VFPWAFASCLL Trigger: GAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||
| CDS CAA 90 bp | TATTCTGGACCTACCTTGCTGGCCAAGGGCTTCGATTTCTCACCTTaGGTTTTCCCATGGGCATTTGCTTCTTGCCTGCTCCCACTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: YSGPTLLAKGFDFSP*VFPWAFASCLLPLR Trigger: ACGCAGTGGGAGCAGGCAAGAAGCAAATGCCCATGGGAAAACCAAAGGTGAGAAATCGAAGCCCTTGGCCAGCAAGGTAGGTCCAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161969.4 |
||