Pregenerated sensors for H1F5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058773

Ensembl transcript IDs: ENSMUST00000080511.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGCCTTAGGCTTAGCGGTCTTAGGCTTGGTAACCTTAGGTTTGGATaGCTTAGACTTCACCGCCTTGGGCTTGGCCGGGCTCTTTGCTGC	+
Preference number: 5 (lower is better) Translates to: SLRLSGLRLGNLRFG*LRLHRLGLGRALCC Trigger: GCAGCAAAGAGCCCGGCCAAGCCCAAGGCGGTGAAGTCTAAGGCATCCAAACCTAAGGTTACCAAGCCTAAGACCGCTAAGCCTAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080511.3
CDS CAA 90 bp	ACAGCCTTCTTGGCCTTGGCAGCCTTAGGCTTAGCGGTCTTAGGCTaGGTAACCTTAGGTTTGGATGCCTTAGACTTCACCGCCTTGGGC	+
Preference number: 6 (lower is better) Translates to: TAFLALAALGLAVLG*VTLGLDALDFTALG Trigger: GCCCAAGGCGGTGAAGTCTAAGGCATCCAAACCTAAGGTTACCAAGCCTAAGACCGCTAAGCCTAAGGCTGCCAAGGCCAAGAAGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080511.3
CDS CAA 72 bp	TTAGGCTTAGCGGTCTTAGGCTTGGTAACCTTAGGTTaGGATGCCTTAGACTTCACCGCCTTGGGCTTGGCC	+
Preference number: 6 (lower is better) Translates to: LGLAVLGLVTLG*DALDFTALGLA Trigger: GGCCAAGCCCAAGGCGGTGAAGTCTAAGGCATCCAAACCTAAGGTTACCAAGCCTAAGACCGCTAAGCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080511.3

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