Pregenerated sensors for H1F0 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096210Ensembl transcript IDs: ENSMUST00000180086.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAGGGATCCAAACTCTGTCCTCTTTAATAAAGTCAGAATAGAATaGGCAAAGGGTTGCAGATGGAATCAAGTGAGGAAATGTATTTAC | + |
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Preference number: 1 (lower is better) Translates to: MRDPNSVLFNKVRIE*AKGCRWNQVRKCIY Trigger: GTAAATACATTTCCTCACTTGATTCCATCTGCAACCCTTTGCCCATTCTATTCTGACTTTATTAAAGAGGACAGAGTTTGGATCCCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAATTTTCCCTCCCTCCTTaGCCAGCTAGGTGGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VDLKRHQAKPHLTQEREEFSLPP*PARWGV Trigger: GACACCCCACCTAGCTGGCCAAGGAGGGAGGGAAAA...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR TCA 90 bp | GGTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGACCCCATCAAAGGTTTTaGAAAGCTCACGAGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: GRPEAAPSKATSYTGKGRPHQRF*KAHEGQ Trigger: TTGTCCCTCGTGAGCTTTTCAAAACCTTTGATGGGG...TCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTAGCCAGAACTTTGCCGAATGGGCAAAGGGTTaGAGATGGAATCAAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SWKTNLSSWVPSPSQNFAEWAKG*RWNQVR Trigger: CCTCACTTGATTCCATCTGCAACCCTTTGCCCATTC...GGCAAAGTTCTGGCTAGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR CCA 90 bp | TTTAACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTACAAACCTTAGTTCCTaGGTCCCCTCACCTAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FNQRLLKKTPPSQWLDPGTNLSS*VPSPSQ Trigger: CTGGCTAGGTGAGGGGACCCAGGAACTAAGGTTTGT...ACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCCCTCACCTAGCCAGAACTTTGCCAGTTCCTTCATAGTAAACAAACCACCGAAAGTCAGAATAGAATaGGCAAAGGGTTGCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: VPSPSQNFASSFIVNKPPKVRIE*AKGCRW Trigger: CCATCTGCAACCCTTTGCCCATTCTATTCTGACTTT...CGGTGGTTTGTTTACTATGAAGGAACTGGCAAAGTTCTGGCTAGGTGAGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR CCA 90 bp | GGTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAAGTCTAAGAAAGTCTTaGAAGACAAACCTTAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: GRPEAAPSKATSYTGKGRSLRKS*KTNLSS Trigger: GGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACT...TCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR TCA 90 bp | AAGTACGTCTCCATCATTACAAAGATGAGGTCTGTTTGCTGTCCTTGCACAATAGCAGATGGAATCAAGTaGGGAAATGTATTTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: KYVSIITKMRSVCCPCTIADGIK*GNVFTE Trigger: TTCTGTAAATACATTTCCTCACTTGATTCCATCTGC...TATTGTGCAAGGACAGCAAACAGACCTCATCTTTGTAATGATGGAGACGTACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR-3UTR CAA 90 bp | GGTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAGGCACACTGAGGCACTaGGCTGATTACCCACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GRPEAAPSKATSYTGKGRGTLRH*ADYPPL Trigger: GAGGGGTGGGTAATCAGCCAAGTGCCTCAGTGTGCC...TCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR TCA 72 bp | AACCCAAGTTTCCATAGGCACACTGAGGCACTTGGCTaGTTACCCACCCCTCCCCCTAAGTCCACTCGCATT | + |
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Preference number: 3 (lower is better) Translates to: NPSFHRHTEALG*LPTPPPKSTRI Trigger: AATGCGAGTGGACTTAGGGGGAGGGGTGGGTAATCAGCCAAGTGCCTCAGTGTGCCTATGGAAACTTGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR GCA 72 bp | TATGGCTTCTCTAACCAGCTGTCACTTGGACCCCTTTaGCCCTTTAGACAATGGGGAGGCACTAGGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: YGFSNQLSLGPL*PFRQWGGTRAE Trigger: TTCTGCCCTAGTGCCTCCCCATTGTCTAAAGGGGCAAAGGGGTCCAAGTGACAGCTGGTTAGAGAAGCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR TCA 72 bp | AAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTTGTaGGAAGCTATGGCTTCTCTAACCAGCTGTCACTTG | + |
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Preference number: 3 (lower is better) Translates to: KDPSFPMARSWL*EAMASLTSCHL Trigger: CAAGTGACAGCTGGTTAGAGAAGCCATAGCTTCTCACAACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR CCA 72 bp | AGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTaGGTCCCCTCACCTAGCCAGAACTTTGCCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SLRKSWKTNLSS*VPSPSQNFASS Trigger: GGAACTGGCAAAGTTCTGGCTAGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR CCA 72 bp | AAAAGCTCACGAGGGACAAGCAGTCTAAGAAAGTCTTaGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCT | + |
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Preference number: 3 (lower is better) Translates to: KSSRGTSSLRKS*KTNLSSWVPSP Trigger: AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCTTGTCCCTCGTGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR CCA 72 bp | AACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATaGCTAGATCCTGGTTGTGAGAAGCTATGGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: NQRLLKKTPPSQ*LDPGCEKLWLL Trigger: GAGAAGCCATAGCTTCTCACAACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | TCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTAGCCAGAACTTTGCCAAGCCTTGGCCCGTTTaGGCTTCGCCGCCGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SWKTNLSSWVPSPSQNFAKPWPV*ASPPGR Trigger: CCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTT...GGCAAAGTTCTGGCTAGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR TCA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTCGCCCTTGGCCAGCCTaGAGGACCCCGAGGCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPRPWPA*RTPRRP Trigger: TGGGCGCCTCGGGGTCCTTCAGGCTGGCCAAGGGCG...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAAAAAGCAACCAGGTCTCCAACTTACCACCGTTGGTAGGGCAGCCCCAGTGGCTTTCTTGGGCGTaGCAGCCGGCTTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KRKSNQVSNLPPLVGQPQWLSWA*QPASSW Trigger: CCAAGAAGAAGCCGGCTGCCACGCCCAAGAAAGCCA...CTGGGGCTGCCCTACCAACGGTGGTAAGTTGGAGACCTGGTTGCTTTTTCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAAAAAGCAACCAGGTCTCCAACTTACCACCGTTGGTAGGGCAGCCCCAGTCTTGCTTGGGGCTTTaGAGGCAGCCTTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRKSNQVSNLPPLVGQPQSCLGL*RQPSWA Trigger: AGCCCAAGAAGGCTGCCTCCAAAGCCCCAAGCAAGA...CTGGGGCTGCCCTACCAACGGTGGTAAGTTGGAGACCTGGTTGCTTTTTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | TCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTAGCCAGAACTTTGCCCAGCCTTCTTGGGCTTaGCTGCCTTCTTTGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SWKTNLSSWVPSPSQNFAQPSWA*LPSLEW Trigger: CCACTCCAAAGAAGGCAGCCAAGCCCAAGAAGGCTG...GGCAAAGTTCTGGCTAGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAAAAAGCAACCAGGTCTCCAACTTACCACCGTTGGTAGGGCAGCCCCAGTGGGCTTCACGGTTTTaGCCTTCTTGGGTTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KRKSNQVSNLPPLVGQPQWASRF*PSWVWR Trigger: CCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCA...CTGGGGCTGCCCTACCAACGGTGGTAAGTTGGAGACCTGGTTGCTTTTTCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR GCA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAAGGCACGGTTCTTCTCTaGCTGGATAGCAGCCACGAT | + |
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Preference number: 4 (lower is better) Translates to: VDLKRHQAKPHLTQEREEGTVLL*LDSSHD Trigger: ATCGTGGCTGCTATCCAGGCAGAGAAGAACCGTGCC...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR GCA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAACTTCTTGGGCTTGGCTaGCTTCTTTGGAGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VDLKRHQAKPHLTQEREELLGLG*LLWSGH Trigger: GTGGCCACTCCAAAGAAGGCAGCCAAGCCCAAGAAG...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTGGTCCGTGGACTTCTTaGAAGCCTTGGCCCGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPGPWTS*KPWPVW Trigger: CCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACC...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | TTTAACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTTACTTTTGGATGGACTaGCGCGAGGAGCCGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: FNQRLLKKTPPSQWLDPGYFWMD*REEPAR Trigger: CCGTGCCGGCTCCTCGCGCCAGTCCATCCAAAAGTA...ACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR TCA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAACCCCTTTGGTTTGCTTaGGAACACCGGTGGTCACTA | + |
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Preference number: 4 (lower is better) Translates to: VDLKRHQAKPHLTQEREEPLWFA*EHRWSL Trigger: TAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGG...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR GCA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTCCCACCCCTTTGGTTTaGTTGAGAACACCGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPPTPLV*LRTPVV Trigger: GACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGG...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTACTTGGGGTGGTCCGTaGACTTCTTGGAAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPTWGGP*TSWKPW Trigger: CCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGT...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | GGTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGACTTGGCTGCCTTCTTTaGAGTGGCCACTTTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: GRPEAAPSKATSYTGKGRLGCLL*SGHFLD Trigger: GTCAAGAAAGTGGCCACTCCAAAGAAGGCAGCCAAG...TCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR TCA 90 bp | GGTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAGAGTGGCCACTTTCTTaGCTTCCTTCTTGGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GRPEAAPSKATSYTGKGREWPLS*LPSWSS Trigger: AGAAGACCAAGAAGGAAGTCAAGAAAGTGGCCACTC...TCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | GTCCCCTCACCTAGCCAGAACTTTGCCAGTTCCTTCATAGTAAACAAACCACCGTCATGTCTGAATACTTaGGGTGGTCCGTGGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VPSPSQNFASSFIVNKPPSCLNT*GGPWTS Trigger: AGAAGTCCACGGACCACCCCAAGTATTCAGACATGA...CGGTGGTTTGTTTACTATGAAGGAACTGGCAAAGTTCTGGCTAGGTGAGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | TTTAACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTCGGTTCTTCTCTGCCTaGATAGCAGCCACGATCATG | + |
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Preference number: 4 (lower is better) Translates to: FNQRLLKKTPPSQWLDPGRFFSA*IAATIM Trigger: CATGATCGTGGCTGCTATCCAGGCAGAGAAGAACCG...ACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | TTTAACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTATGGACAACTTGATCTaGGAGTCGGCGTTCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: FNQRLLKKTPPSQWLDPGMDNLI*ESAFSP Trigger: GGGTGAGAACGCCGACTCCCAGATCAAGTTGTCCAT...ACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR TCA 90 bp | AGCCAGAACTTTGCCAGTTCCTTCATAGTAAACAAACCACCGACTGAAACACACAGCCACGATCATGTCTaGATACTTGGGGTGGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SQNFASSFIVNKPPTETHSHDHV*ILGVVR Trigger: ACGGACCACCCCAAGTATTCAGACATGATCGTGGCT...GTGTGTTTCAGTCGGTGGTTTGTTTACTATGAAGGAACTGGCAAAGTTCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR TCA 90 bp | GGTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGACCTTGTAGTGGCTCTTaGTATACTTTTGGATGGACT | + |
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Preference number: 4 (lower is better) Translates to: GRPEAAPSKATSYTGKGRPCSGS*YTFGWT Trigger: AGTCCATCCAAAAGTATATCAAGAGCCACTACAAGG...TCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTTCTGAATACTTGGGGTaGTCCGTGGACTTCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPSEYLG*SVDFLE Trigger: TTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGA...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | CACATCTTACACAGGAAAGGGAAGAAAGGAAACGTACAAAGTCCTGCTAGGACGTTTGGGTTTCTTGCTTaGGGCTTTGGAGGCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HILHRKGKKGNVQSPARTFGFLA*GFGGSL Trigger: AAGGCTGCCTCCAAAGCCCCAAGCAAGAAACCCAAA...CGTCCTAGCAGGACTTTGTACGTTTCCTTTCTTCCCTTTCCTGTGTAAGATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | TTGCAGATGGAATCAAGTGAGGAAATGTATTTACAGAAAACAGGAGGGAGGAAGCAACCTTGGGCTTTTTaGCTTTCTTGGGCGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQMESSEEMYLQKTGGRKQPWAF*LSWAWQ Trigger: CTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTG...CTTCCTCCCTCCTGTTTTCTGTAAATACATTTCCTCACTTGATTCCATCTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CCA 90 bp | AAGTACGTCTCCATCATTACAAAGATGAGGTCTGTTTGCTGTCCTTGCACAATACTCTTGATATACTTTTaGATGGACTGGCGCGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KYVSIITKMRSVCCPCTILLIYF*MDWREE Trigger: CTCCTCGCGCCAGTCCATCCAAAAGTATATCAAGAG...TATTGTGCAAGGACAGCAAACAGACCTCATCTTTGTAATGATGGAGACGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| 3UTR CAA 72 bp | AAAGTACGTCTCCATCATTACAAAGATGAGGTCTGTTaGCTGTCCTTGCACAATAGGTTAAGGAAAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KVRLHHYKDEVC*LSLHNRLRKKE Trigger: CTCCTTTTTCCTTAACCTATTGTGCAAGGACAGCAAACAGACCTCATCTTTGTAATGATGGAGACGTACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CCA 90 bp | CAGCCACGATCATGTCTGAATACTTGGGGTGGTCCGTGGACTTCTTaGAAGCCTTGGCCCGTTTGGGCTTCGCCGCCGGGGCGGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QPRSCLNTWGGPWTS*KPWPVWASPPGRRW Trigger: CCACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CCA 90 bp | TCATGTCTGAATACTTGGGGTGGTCCGTGGACTTCTTGGAAGCCTTaGCCCGTTTGGGCTTCGCCGCCGGGGCGGAGGTGGAGTTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: SCLNTWGGPWTSWKP*PVWASPPGRRWSSR Trigger: CCGAGAACTCCACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS GCA 90 bp | CCCTTGGCCAGCCTGAAGGACCCCGAGGCGCCCACCCCTTTGGTTTaGTTGAGAACACCGGTGGTCACTAGGCGCTTGATGGACAACTTG | + |
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Preference number: 5 (lower is better) Translates to: PLASLKDPEAPTPLV*LRTPVVTRRLMDNL Trigger: CAAGTTGTCCATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGCGCCTCGGGGTCCTTCAGGCTGGCCAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS TCA 90 bp | GCCGGCACGGTTCTTCTCTGCCTGGATAGCAGCCACGATCATGTCTaGATACTTGGGGTGGTCCGTGGACTTCTTGGAAGCCTTGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: AGTVLLCLDSSHDHV*ILGVVRGLLGSLGP Trigger: CGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGCTATCCAGGCAGAGAAGAACCGTGCCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CCA 90 bp | TTCTCTGCCTGGATAGCAGCCACGATCATGTCTGAATACTTGGGGTaGTCCGTGGACTTCTTGGAAGCCTTGGCCCGTTTGGGCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: FSAWIAATIMSEYLG*SVDFLEALARLGFA Trigger: GGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGCTATCCAGGCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CAA 90 bp | TTGCAGATGGAATCAAGTGAGGAAATGTATTTACAGAAAACAGGAGGGAGGAAGGAAGCCTTGGCCCGTTaGGGCTTCGCCGCCGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LQMESSEEMYLQKTGGRKEALAR*GFAAGA Trigger: CGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTC...CTTCCTCCCTCCTGTTTTCTGTAAATACATTTCCTCACTTGATTCCATCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAAAAAGCAACCAGGTCTCCAACTTACCACCGTTGGTAGGGCAGCCCCAGCGCTTGATGGACAACTaGATCTGGGAGTCGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRKSNQVSNLPPLVGQPQRLMDN*IWESAF Trigger: GAACGCCGACTCCCAGATCAAGTTGTCCATCAAGCG...CTGGGGCTGCCCTACCAACGGTGGTAAGTTGGAGACCTGGTTGCTTTTTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAAGCAGCCGGCTTCTTCTaGGCCTTCTTGACAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VDLKRHQAKPHLTQEREEAAGFF*AFLTGV Trigger: CACCCCTGTCAAGAAGGCCAAGAAGAAGCCGGCTGC...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS GCA 90 bp | GGGTTTCTTGCTTGGGGCTTTGGAGGCAGCCTTCTTGGGCTTGGCTaGCTTCTTTGGAGTGGCCACTTTCTTGACTTCCTTCTTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GFLAWGFGGSLLGLG*LLWSGHFLDFLLGL Trigger: AAGACCAAGAAGGAAGTCAAGAAAGTGGCCACTCCAAAGAAGGCAGCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAAGCAAGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AGCCAGAACTTTGCCAGTTCCTTCATAGTAAACAAACCACCGACTGAAACACACTTGGGCTCATCGCCCTaGGCCAGCCTGAAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQNFASSFIVNKPPTETHLGSSP*ASLKDP Trigger: GGGGTCCTTCAGGCTGGCCAAGGGCGATGAGCCCAA...GTGTGTTTCAGTCGGTGGTTTGTTTACTATGAAGGAACTGGCAAAGTTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTGCCCACCCCTTTGGTTaGCTTGAGAACACCGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPAHPFG*LENTGG Trigger: ACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGC...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAAAAGCAACCAGGTCTCCAACTTACCACCGTTGGTAGGGCAGCCCCAGGGAGTGGCCACTTTCTaGACTTCCTTCTTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRKSNQVSNLPPLVGQPQGVATF*TSFLVF Trigger: GAAGACCAAGAAGGAAGTCAAGAAAGTGGCCACTCC...CTGGGGCTGCCCTACCAACGGTGGTAAGTTGGAGACCTGGTTGCTTTTTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTTTCTTGCTTGGGGCTTaGGAGGCAGCCTTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPFLLGA*EAAFLG Trigger: GCCCAAGAAGGCTGCCTCCAAAGCCCCAAGCAAGAA...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTCCCCTCACCTAGCCAGAACTTTGCCAGTTCCTTCATAGTAAACAAACCACCGGTGGCTTTGGGTTTCTaGCTTGGGGCTTTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPSPSQNFASSFIVNKPPVALGF*LGALEA Trigger: TGCCTCCAAAGCCCCAAGCAAGAAACCCAAAGCCAC...CGGTGGTTTGTTTACTATGAAGGAACTGGCAAAGTTCTGGCTAGGTGAGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | CACATCTTACACAGGAAAGGGAAGAAAGGAAACGTACAAAGTCCTGCTAGGACGGGCTTTTTGGCTTTCTaGGGCGTGGCAGCCGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HILHRKGKKGNVQSPARTGFLAF*GVAAGF Trigger: GAAGCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCC...CGTCCTAGCAGGACTTTGTACGTTTCCTTTCTTCCCTTTCCTGTGTAAGATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAATTCTTCTTGGCCTTCTaGACAGGGGTGGCTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VDLKRHQAKPHLTQEREEFFLAF*TGVALG Trigger: ACCCAAAGCCACCCCTGTCAAGAAGGCCAAGAAGAA...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTCCCCTCACCTAGCCAGAACTTTGCCAGTTCCTTCATAGTAAACAAACCACCGACAACCTTGGGCTTTTaGGCTTTCTTGGGCGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPSPSQNFASSFIVNKPPTTLGF*AFLGVA Trigger: TGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGT...CGGTGGTTTGTTTACTATGAAGGAACTGGCAAAGTTCTGGCTAGGTGAGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CCA 90 bp | TTTGGGCTTCACGGTTTTGGCCTTCTTGGGTTTGGAGGCCTTGACTaGTTTGACTTTGACAACCTTGGGCTTTTTGGCTTTCTTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FGLHGFGLLGFGGLD*FDFDNLGLFGFLGR Trigger: ACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAAATCATGTCTGAATACTaGGGGTGGTCCGTGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VDLKRHQAKPHLTQEREEIMSEY*GWSVDF Trigger: GAAGTCCACGGACCACCCCAAGTATTCAGACATGAT...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTGTGGTCACTAGGCGCTaGATGGACAACTTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPVVTRR*MDNLIW Trigger: CCAGATCAAGTTGTCCATCAAGCGCCTAGTGACCAC...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTCTTTGGGTTTCTTGCTaGGGGCTTTGGAGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FNQRLLKKTPPSQWLDPGLWVSC*GLWRQP Trigger: AGGCTGCCTCCAAAGCCCCAAGCAAGAAACCCAAAG...ACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTGAGGCCTTGACTGGTTaGACTTTGACAACCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPEALTG*TLTTLG Trigger: GCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTC...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AAGTACGTCTCCATCATTACAAAGATGAGGTCTGTTTGCTGTCCTTGCACAATAGACTTCTTGGAAGCCTaGGCCCGTTTGGGCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KYVSIITKMRSVCCPCTIDFLEA*ARLGFA Trigger: GGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTC...TATTGTGCAAGGACAGCAAACAGACCTCATCTTTGTAATGATGGAGACGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCTAAGAAAGTCTTGGAAGACAAACCTTAGTTCCTGGGTCCCCTCACCTGCTCTTGATATACTTTaGGATGGACTGGCGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLRKSWKTNLSSWVPSPALDIL*DGLARG Trigger: TCCTCGCGCCAGTCCATCCAAAAGTATATCAAGAGC...AGGTGAGGGGACCCAGGAACTAAGGTTTGTCTTCCAAGACTTTCTTAGACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACCAGAGACTACTGAAAAAGACCCCTCCTTCCCAATGGCTAGATCCTGGTACCCCTTTGGTTTGCTaGAGAACACCGGTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FNQRLLKKTPPSQWLDPGTPLVC*RTPVVT Trigger: AGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGT...ACCAGGATCTAGCCATTGGGAAGGAGGGGTCTTTTTCAGTAGTCTCTGGTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAAAAGCAACCAGGTCTCCAACTTACCACCGTTGGTAGGGCAGCCCCAGTTGACTGGTTTGACTTaGACAACCTTGGGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRKSNQVSNLPPLVGQPQLTGLT*TTLGFL Trigger: CAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAA...CTGGGGCTGCCCTACCAACGGTGGTAAGTTGGAGACCTGGTTGCTTTTTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | TTGCAGATGGAATCAAGTGAGGAAATGTATTTACAGAAAACAGGAGGGAGGAAGTGGTCCGTGGACTTCTaGGAAGCCTTGGCCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQMESSEEMYLQKTGGRKWSVDF*EALARL Trigger: CAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCA...CTTCCTCCCTCCTGTTTTCTGTAAATACATTTCCTCACTTGATTCCATCTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAATTCTTGACTTCCTTCTaGGTCTTCTTGAAAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VDLKRHQAKPHLTQEREEFLTSF*VFLKAT Trigger: GGTGGCTTTCAAGAAGACCAAGAAGGAAGTCAAGAA...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | TTGCAGATGGAATCAAGTGAGGAAATGTATTTACAGAAAACAGGAGGGAGGAAGTTGACAGGGGTGGCTTaGGGTTTCTTGCTTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQMESSEEMYLQKTGGRKLTGVA*GFLLGA Trigger: AGCCCCAAGCAAGAAACCCAAAGCCACCCCTGTCAA...CTTCCTCCCTCCTGTTTTCTGTAAATACATTTCCTCACTTGATTCCATCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | GTAGACCTGAAGCGGCACCAAGCAAAGCCACATCTTACACAGGAAAGGGAAGAATTGACTTTGACAACCTaGGGCTTTTTGGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VDLKRHQAKPHLTQEREELTLTT*GFLAFL Trigger: CAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAA...TTCTTCCCTTTCCTGTGTAAGATGTGGCTTTGCTTGGTGCCGCTTCAGGTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | TTGCAGATGGAATCAAGTGAGGAAATGTATTTACAGAAAACAGGAGGGAGGAAGCTCTTGGCACTCGACTaGGCTTTGGGCTTCACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQMESSEEMYLQKTGGRKLLALD*ALGFTV Trigger: AACCGTGAAGCCCAAAGCCAAGTCGAGTGCCAAGAG...CTTCCTCCCTCCTGTTTTCTGTAAATACATTTCCTCACTTGATTCCATCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS-3UTR CAA 90 bp | AAGTACGTCTCCATCATTACAAAGATGAGGTCTGTTTGCTGTCCTTGCACAATATCCTTCTTGGTCTTCTaGAAAGCCACCGACCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KYVSIITKMRSVCCPCTISFLVF*KATDLL Trigger: CAAAAGGTCGGTGGCTTTCAAGAAGACCAAGAAGGA...TATTGTGCAAGGACAGCAAACAGACCTCATCTTTGTAATGATGGAGACGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CCA 72 bp | GGTGGTCCGTGGACTTCTTGGAAGCCTTGGCCCGTTTaGGCTTCGCCGCCGGGGCGGAGGTGGAGTTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GGPWTSWKPWPV*ASPPGRRWSSR Trigger: CCGAGAACTCCACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | GGGTGGTCCGTGGACTTCTTGGAAGCCTTGGCCCGTTaGGGCTTCGCCGCCGGGGCGGAGGTGGAGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GWSVDFLEALAR*GFAAGAEVEFS Trigger: CGAGAACTCCACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CCA 72 bp | AATACTTGGGGTGGTCCGTGGACTTCTTGGAAGCCTTaGCCCGTTTGGGCTTCGCCGCCGGGGCGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: NTWGGPWTSWKP*PVWASPPGRRW Trigger: CCACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | GAATACTTGGGGTGGTCCGTGGACTTCTTGGAAGCCTaGGCCCGTTTGGGCTTCGCCGCCGGGGCGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EYLGWSVDFLEA*ARLGFAAGAEV Trigger: CACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | TTGGCCAGCCTGAAGGACCCCGAGGCGCCCACCCCTTaGGTTTGCTTGAGAACACCGGTGGTCACTAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LASLKDPEAPTP*VCLRTPVVTRR Trigger: GCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGCGCCTCGGGGTCCTTCAGGCTGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | GCAGCCACGATCATGTCTGAATACTTGGGGTGGTCCGTGGACTTCTaGGAAGCCTTGGCCCGTTTGGGCTTCGCCGCCGGGGCGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AATIMSEYLGWSVDF*EALARLGFAAGAEV Trigger: CACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | TCATCGCCCTTGGCCAGCCTGAAGGACCCCGAGGCGCCCACCCCTTaGGTTTGCTTGAGAACACCGGTGGTCACTAGGCGCTTGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSPLASLKDPEAPTP*VCLRTPVVTRRLMD Trigger: GTCCATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGCGCCTCGGGGTCCTTCAGGCTGGCCAAGGGCGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | ATCATGTCTGAATACTTGGGGTGGTCCGTGGACTTCTTGGAAGCCTaGGCCCGTTTGGGCTTCGCCGCCGGGGCGGAGGTGGAGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: IMSEYLGWSVDFLEA*ARLGFAAGAEVEFS Trigger: CGAGAACTCCACCTCCGCCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS GCA 72 bp | AGCCTGAAGGACCCCGAGGCGCCCACCCCTTTGGTTTaGTTGAGAACACCGGTGGTCACTAGGCGCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLKDPEAPTPLV*LRTPVVTRRLM Trigger: CATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGCGCCTCGGGGTCCTTCAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CCA 72 bp | TCATGTCTGAATACTTGGGGTGGTCCGTGGACTTCTTaGAAGCCTTGGCCCGTTTGGGCTTCGCCGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCLNTWGGPWTS*KPWPVWASPPG Trigger: CCCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | CTGAAGGACCCCGAGGCGCCCACCCCTTTGGTTTGCTaGAGAACACCGGTGGTCACTAGGCGCTTGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LKDPEAPTPLVC*RTPVVTRRLMD Trigger: GTCCATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGCGCCTCGGGGTCCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | GGCGTGGCAGCCGGCTTCTTCTTGGCCTTCTTGACAGGGGTGGCTTaGGGTTTCTTGCTTGGGGCTTTGGAGGCAGCCTTCTTGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVAAGFFLAFLTGVA*GFLLGALEAAFLGL Trigger: CAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAAGCAAGAAACCCAAAGCCACCCCTGTCAAGAAGGCCAAGAAGAAGCCGGCTGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | ATCATGTCTGAATACTTGGGGTGGTCCGTGGACTTCTaGGAAGCCTTGGCCCGTTTGGGCTTCGCCGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: IMSEYLGWSVDF*EALARLGFAAG Trigger: CCCGGCGGCGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | TTGGCCAGCCTGAAGGACCCCGAGGCGCCCACCCCTTTGGTTTGCTaGAGAACACCGGTGGTCACTAGGCGCTTGATGGACAACTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LASLKDPEAPTPLVC*RTPVVTRRLMDNLI Trigger: GATCAAGTTGTCCATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGGCGCCTCGGGGTCCTTCAGGCTGGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS TCA 72 bp | GGGAGTCGGCGTTCTCACCCACCTTGTAGTGGCTCTTaGTATACTTTTGGATGGACTGGCGCGAGGAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRRSHPPCSGS*YTFGWTGARSR Trigger: CCGGCTCCTCGCGCCAGTCCATCCAAAAGTATATCAAGAGCCACTACAAGGTGGGTGAGAACGCCGACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | CGGTTCTTCTCTGCCTGGATAGCAGCCACGATCATGTCTGAATACTaGGGGTGGTCCGTGGACTTCTTGGAAGCCTTGGCCCGTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFFSAWIAATIMSEY*GWSVDFLEALARLG Trigger: GCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGCTATCCAGGCAGAGAAGAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | CCCACCCCTTTGGTTTGCTTGAGAACACCGGTGGTCACTAGGCGCTaGATGGACAACTTGATCTGGGAGTCGGCGTTCTCACCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PTPLVCLRTPVVTRR*MDNLIWESAFSPTL Trigger: CAAGGTGGGTGAGAACGCCGACTCCCAGATCAAGTTGTCCATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAAAGGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 90 bp | GGGGTGGCTTTGGGTTTCTTGCTTGGGGCTTTGGAGGCAGCCTTCTaGGGCTTGGCTGCCTTCTTTGGAGTGGCCACTTTCTTGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVALGFLLGALEAAF*GLAAFFGVATFLTS Trigger: GGAAGTCAAGAAAGTGGCCACTCCAAAGAAGGCAGCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAAGCAAGAAACCCAAAGCCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CCA 72 bp | CAGCCACGATCATGTCTGAATACTTGGGGTGGTCCGTaGACTTCTTGGAAGCCTTGGCCCGTTTGGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: QPRSCLNTWGGP*TSWKPWPVWAS Trigger: CGAAGCCCAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CCA 72 bp | TCTTCTTGCTGGCCCTCTTGGCACTCGACTTGGCTTTaGGCTTCACGGTTTTGGCCTTCTTGGGTTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCWPSWHSTWL*ASRFWPSWVWR Trigger: CCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAAGCCAAGTCGAGTGCCAAGAGGGCCAGCAAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | TCTGCCTGGATAGCAGCCACGATCATGTCTGAATACTaGGGGTGGTCCGTGGACTTCTTGGAAGCCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAWIAATIMSEY*GWSVDFLEALA Trigger: GGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGCTATCCAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
||
| CDS CAA 72 bp | GGTTTGGAGGCCTTGACTGGTTTGACTTTGACAACCTaGGGCTTTTTGGCTTTCTTGGGCGTGGCAGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLEALTGLTLTT*GFLAFLGVAAG Trigger: GCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | GCCTTCTTTGGAGTGGCCACTTTCTTGACTTCCTTCTTGGTCTTCTaGAAAGCCACCGACCTTTTGGGCTCATCGCCCTTGGCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: AFFGVATFLTSFLVF*KATDLLGSSPLASL Trigger: CAGGCTGGCCAAGGGCGATGAGCCCAAAAGGTCGGTGGCTTTCAAGAAGACCAAGAAGGAAGTCAAGAAAGTGGCCACTCCAAAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | GCCTTGACTGGTTTGACTTTGACAACCTTGGGCTTTTTGGCTTTCTaGGGCGTGGCAGCCGGCTTCTTCTTGGCCTTCTTGACAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: ALTGLTLTTLGFLAF*GVAAGFFLAFLTGV Trigger: CACCCCTGTCAAGAAGGCCAAGAAGAAGCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | ACGGTTTTGGCCTTCTTGGGTTTGGAGGCCTTGACTGGTTTGACTTaGACAACCTTGGGCTTTTTGGCTTTCTTGGGCGTGGCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: TVLAFLGLEALTGLT*TTLGFLAFLGVAAG Trigger: GCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CCA 72 bp | TGGATAGCAGCCACGATCATGTCTGAATACTTGGGGTaGTCCGTGGACTTCTTGGAAGCCTTGGCCCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: WIAATIMSEYLG*SVDFLEALARL Trigger: CAAACGGGCCAAGGCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGCTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | GTTCTCACCCACCTTGTAGTGGCTCTTGATATACTTTaGGATGGACTGGCGCGAGGAGCCGGCACGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLTHLVVALDIL*DGLARGAGTVL Trigger: AAGAACCGTGCCGGCTCCTCGCGCCAGTCCATCCAAAAGTATATCAAGAGCCACTACAAGGTGGGTGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | CTCTTGGCACTCGACTTGGCTTTGGGCTTCACGGTTTaGGCCTTCTTGGGTTTGGAGGCCTTGACTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLALDLALGFTV*AFLGLEALTGL Trigger: CAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAAGCCAAGTCGAGTGCCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | TTCTTCTTGCTGGCCCTCTTGGCACTCGACTTGGCTTaGGGCTTCACGGTTTTGGCCTTCTTGGGTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FFLLALLALDLA*GFTVLAFLGLE Trigger: CTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAAGCCAAGTCGAGTGCCAAGAGGGCCAGCAAGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | GGCTTGGCTGCCTTCTTTGGAGTGGCCACTTTCTTGACTTCCTTCTaGGTCTTCTTGAAAGCCACCGACCTTTTGGGCTCATCGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLAAFFGVATFLTSF*VFLKATDLLGSSPL Trigger: CAAGGGCGATGAGCCCAAAAGGTCGGTGGCTTTCAAGAAGACCAAGAAGGAAGTCAAGAAAGTGGCCACTCCAAAGAAGGCAGCCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | GGTTTGGAGGCCTTGACTGGTTTGACTTTGACAACCTTGGGCTTTTaGGCTTTCTTGGGCGTGGCAGCCGGCTTCTTCTTGGCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLEALTGLTLTTLGF*AFLGVAAGFFLAFL Trigger: CAAGAAGGCCAAGAAGAAGCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | GCCTTCTTGGGTTTGGAGGCCTTGACTGGTTTGACTTTGACAACCTaGGGCTTTTTGGCTTTCTTGGGCGTGGCAGCCGGCTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AFLGLEALTGLTLTT*GFLAFLGVAAGFFL Trigger: CAAGAAGAAGCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | TTGCTGGCCCTCTTGGCACTCGACTTGGCTTTGGGCTTCACGGTTTaGGCCTTCTTGGGTTTGGAGGCCTTGACTGGTTTGACTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: LLALLALDLALGFTV*AFLGLEALTGLTLT Trigger: TGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAAGCCAAGTCGAGTGCCAAGAGGGCCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS TCA 72 bp | GTTCTTCTCTGCCTGGATAGCAGCCACGATCATGTCTaGATACTTGGGGTGGTCCGTGGACTTCTTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VLLCLDSSHDHV*ILGVVRGLLGS Trigger: GCTTCCAAGAAGTCCACGGACCACCCCAAGTATTCAGACATGATCGTGGCTGCTATCCAGGCAGAGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | TTGGTTTGCTTGAGAACACCGGTGGTCACTAGGCGCTaGATGGACAACTTGATCTGGGAGTCGGCGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVCLRTPVVTRR*MDNLIWESAFS Trigger: TGAGAACGCCGACTCCCAGATCAAGTTGTCCATCAAGCGCCTAGTGACCACCGGTGTTCTCAAGCAAACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | GGTTTGACTTTGACAACCTTGGGCTTTTTGGCTTTCTaGGGCGTGGCAGCCGGCTTCTTCTTGGCCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLTLTTLGFLAF*GVAAGFFLAFL Trigger: CAAGAAGGCCAAGAAGAAGCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | GCCTTGACTGGTTTGACTTTGACAACCTTGGGCTTTTaGGCTTTCTTGGGCGTGGCAGCCGGCTTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALTGLTLTTLGF*AFLGVAAGFFL Trigger: CAAGAAGAAGCCGGCTGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | GGCTTCACGGTTTTGGCCTTCTTGGGTTTGGAGGCCTTGACTGGTTaGACTTTGACAACCTTGGGCTTTTTGGCTTTCTTGGGCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GFTVLAFLGLEALTG*TLTTLGFLAFLGVA Trigger: TGCCACGCCCAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | CTCGACTTGGCTTTGGGCTTCACGGTTTTGGCCTTCTaGGGTTTGGAGGCCTTGACTGGTTTGACTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: LDLALGFTVLAF*GLEALTGLTLT Trigger: TGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAAGCCAAGTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | GGCTTCACGGTTTTGGCCTTCTTGGGTTTGGAGGCCTaGACTGGTTTGACTTTGACAACCTTGGGCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GFTVLAFLGLEA*TGLTLTTLGFL Trigger: CAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 90 bp | TTGGCTTTGGGCTTCACGGTTTTGGCCTTCTTGGGTTTGGAGGCCTaGACTGGTTTGACTTTGACAACCTTGGGCTTTTTGGCTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LALGFTVLAFLGLEA*TGLTLTTLGFLAFL Trigger: CAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTGAAGCCCAAAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CCA 72 bp | CACGGTTTTGGCCTTCTTGGGTTTGGAGGCCTTGACTaGTTTGACTTTGACAACCTTGGGCTTTTTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HGFGLLGFGGLD*FDFDNLGLFGF Trigger: AAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAACCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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| CDS CAA 72 bp | GTTTTGGCCTTCTTGGGTTTGGAGGCCTTGACTGGTTaGACTTTGACAACCTTGGGCTTTTTGGCTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: VLAFLGLEALTG*TLTTLGFLAFL Trigger: CAAGAAAGCCAAAAAGCCCAAGGTTGTCAAAGTCAAACCAGTCAAGGCCTCCAAACCCAAGAAGGCCAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180086.3 |
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