Pregenerated sensors for GZMN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015443Ensembl transcript IDs: ENSMUST00000015587.9, ENSMUST00000225535.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTTATTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTaGTTCTTGCCTGAGGGCGGACAGGCTGGTAAGGCACGGGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: EVIYCEFSFFAAHST*FLPEGGQAGKARVV Trigger: AACCACCCGTGCCTTACCAGCCTGTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAATAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| 3UTR TCA 90 bp | TGTGCTTATCCACGGCAGGAAGTGCACAACCTTAGTGAAGACTCCTaGAGAGATCTTCTTGGATTTCACATAAGACAAAACTCCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: CAYPRQEVHNLSEDS*RDLLGFHIRQNSMS Trigger: GCTCATGGAGTTTTGTCTTATGTGAAATCCAAGAAGATCTCTTCAGGAGTCTTCACTAAGGTTGTGCACTTCCTGCCGTGGATAAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACGGGTGGTTTAACTCCTGTTAGAGCAGCTTCATGTTTGTGCTTATCCACGGCTGCCCACTCCACGTaGTTCTTGCCTGAGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: GTGGLTPVRAASCLCLSTAAHST*FLPEGG Trigger: TCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGC...CGTGGATAAGCACAAACATGAAGCTGCTCTAACAGGAGTTAAACCACCCGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTAGAGCAGCTTCATGTTTGTGCTTATCCACGGCAGGAAGTGCACAACCTTATTTTCATTCTTTGCTaGCCACTCCACGTGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLEQLHVCAYPRQEVHNLIFILC*PLHVVL Trigger: AAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAAT...AAGGTTGTGCACTTCCTGCCGTGGATAAGCACAAACATGAAGCTGCTCTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| 3UTR GCA 72 bp | AATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTaGCTGAGGGCGGACAGGCTGGTAAGGCACGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: NFHSLLPTPRGS*LRADRLVRHGW Trigger: CCACCCGTGCCTTACCAGCCTGTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| 3UTR CCA 72 bp | TATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTaGTTCTTGCCTGAGGGCGGACAGGCTGGTAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: YCEFSFFAAHST*FLPEGGQAGKA Trigger: TGCCTTACCAGCCTGTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| 3UTR GCA 72 bp | AGCAGCTTCATGTTTGTGCTTATCCACGGCAGGAAGTaGACAACCTTAGTGAAGACTCCTGAAGAGATCTTC | + |
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Preference number: 3 (lower is better) Translates to: SSFMFVLIHGRK*TTLVKTPEEIF Trigger: GAAGATCTCTTCAGGAGTCTTCACTAAGGTTGTGCACTTCCTGCCGTGGATAAGCACAAACATGAAGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR TCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACCTCATGGCCCCCGATaGCCTCCTCTGCTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAHSTWFLPEGGPHGPR*PPLLHL Trigger: GAGATGGAGCAGAGGAGGTCATCGGGGGCCATGAGG...TCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| 3UTR CAA 72 bp | GAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTaGCCTGAGGGCGGACAGGCTGGTAAGGCACGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EFSFFAAHSTWF*PEGGQAGKARV Trigger: CACCCGTGCCTTACCAGCCTGTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGTGGGGCTTGACCTCATaGCCCCCGATGACCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPTPRGSCLRAWGLTS*PPMTSS Trigger: AGAGGAGGTCATCGGGGGCCATGAGGTCAAGCCCCA...CGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR GCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGCCCGATGACCTCCTCTaGTCCATCTCCTACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPTPRGSCLRAPDDLL*SISYWQ Trigger: CTGCCAGTAGGAGATGGAGCAGAGGAGGTCATCGGG...CGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR GCA 90 bp | GGCACGGGTGGTTTAACTCCTGTTAGAGCAGCTTCATGTTTGTGCTTATCCACGCCCGATGACCTCCTCTaGTCCATCTCCTACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GTGGLTPVRAASCLCLSTPDDLL*SISYWQ Trigger: CTGCCAGTAGGAGATGGAGCAGAGGAGGTCATCGGG...CGTGGATAAGCACAAACATGAAGCTGCTCTAACAGGAGTTAAACCACCCGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGCCTCATGGCCCCCGATaGCCTCCTCTGCTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: FIVNFHSLLPTPRGSCLRPHGPR*PPLLHL Trigger: GAGATGGAGCAGAGGAGGTCATCGGGGGCCATGAGG...CCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR TCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACATCCTTCAGTGGTATTaGTGGACGTTTTCCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPTPRGSCLRADILQWY*WTFSPS Trigger: GCTGGGGGAAAACGTCCATCAATACCACTGAAGGAT...GTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR GCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGATCATTGAGCTTCCAATaGAGTGAGCAGCCGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAHSTWFLPEGGSLSFQ*SEQPSA Trigger: TGCTGACGGCTGCTCACTGCATTGGAAGCTCAATGA...TCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTGGGGCTTGACCTCATaGCCCCCGATGACCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FIVNFHSLLPTPRGSCLRWGLTS*PPMTSS Trigger: AGAGGAGGTCATCGGGGGCCATGAGGTCAAGCCCCA...CCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR GCA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGCCCAGCCAGCCACACTaGACACATCCCCTGGATTCA | + |
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Preference number: 4 (lower is better) Translates to: FIVNFHSLLPTPRGSCLRPSQPH*THPLDS Trigger: TGAATCCAGGGGATGTGTGCAGTGTGGCTGGCTGGG...CCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR TCA 90 bp | CTGTTAGAGCAGCTTCATGTTTGTGCTTATCCACGGCAGGAAGTGCACAACCTTATCCTTCAGTGGTATTaGTGGACGTTTTCCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLEQLHVCAYPRQEVHNLILQWY*WTFSPS Trigger: GCTGGGGGAAAACGTCCATCAATACCACTGAAGGAT...AAGGTTGTGCACTTCCTGCCGTGGATAAGCACAAACATGAAGCTGCTCTAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR CCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACCAGAGGATTATAGTCTaGGTGGGGAAGAGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPTPRGSCLRADQRIIV*VGKSFI Trigger: AATAAAGCTCTTCCCCACCCAGACTATAATCCTCTG...GTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACAGCCTCTATTTTGTTTaGGTCTCCAGCACAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPTPRGSCLRADSLYFV*VSSTNL Trigger: GAGATTTGTGCTGGAGACCCAAACAAAATAGAGGCT...GTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| 3UTR CAA 72 bp | GCACTCTGGAGGTTATTTATTGTGAATTTTCATTCTTaGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: ALWRLFIVNFHS*LPTPRGSCLRA Trigger: CGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAATAACCTCCAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015587.9 |
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| CDS-3UTR TCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGCAGCACAAATCTCTGTaGTTTTGGAATAGTGACGGA | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPTPRGSCLRAQHKSL*FWNSDG Trigger: TCCGTCACTATTCCAAAATCACAGAGATTTGTGCTG...CGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR GCA 90 bp | TGGATTTCACATAAGACAAAACTCCATGAGCTTTGTTGTTACACACGAGGGGTCTCATTGAGCTTCCAATaGAGTGAGCAGCCGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WISHKTKLHELCCYTRGVSLSFQ*SEQPSA Trigger: TGCTGACGGCTGCTCACTGCATTGGAAGCTCAATGA...GACCCCTCGTGTGTAACAACAAAGCTCATGGAGTTTTGTCTTATGTGAAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTTGGATTTCACATAAGACAAAACTCCATGAGCTTTGTTGTTACACACGACAGAGGATTATAGTCTaGGTGGGGAAGAGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: SSWISHKTKLHELCCYTRQRIIV*VGKSFI Trigger: AATAAAGCTCTTCCCCACCCAGACTATAATCCTCTG...TCGTGTGTAACAACAAAGCTCATGGAGTTTTGTCTTATGTGAAATCCAAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACGGGCGAGAGTGGGGCTaGACCTCATGGCCCCCGATG | + |
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Preference number: 5 (lower is better) Translates to: VNFHSLLPTPRGSCLRADGREWG*TSWPPM Trigger: CATCGGGGGCCATGAGGTCAAGCCCCACTCTCGCCC...GTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS TCA 90 bp | TCTGCTGAGTCTCCTCCTGTGCACGGAGGTTGTGGGCCCCCAGTGTaGCTGTCATTGAGCTTCCAATGCAGTGAGCAGCCGTCAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: SAESPPVHGGCGPPV*LSLSFQCSEQPSAQ Trigger: TTGTGCTGACGGCTGCTCACTGCATTGGAAGCTCAATGACAGTCACACTGGGGGCCCACAACCTCCGTGCACAGGAGGAGACTCAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGGGCGAGAGTGGGGCTaGACCTCATGGCCCCCGATG | + |
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Preference number: 5 (lower is better) Translates to: FIVNFHSLLPTPRGSCLRGREWG*TSWPPM Trigger: CATCGGGGGCCATGAGGTCAAGCCCCACTCTCGCCC...CCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACGGATTCACCTTGTCTTaGGGCCCAGGCAACTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VNFHSLLPTPRGSCLRADGFTLS*GPGNLR Trigger: CCTCAAGTTGCCTGGGCCCAAAGACAAGGTGAATCC...GTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACCAGCACAAAGTAGTCTaGAACCAGGAAGCCGCCACA | + |
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Preference number: 5 (lower is better) Translates to: VNFHSLLPTPRGSCLRADQHKVV*NQEAAT Trigger: TGTGGCGGCTTCCTGGTTCAAGACTACTTTGTGCTG...GTCCGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | CCTGTTAGAGCAGCTTCATGTTTGTGCTTATCCACGGCAGGAAGTGCACAACCTCAGCACAAAGTAGTCTaGAACCAGGAAGCCGCCACA | + |
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Preference number: 5 (lower is better) Translates to: PVRAASCLCLSTAGSAQPQHKVV*NQEAAT Trigger: TGTGGCGGCTTCCTGGTTCAAGACTACTTTGTGCTG...AGGTTGTGCACTTCCTGCCGTGGATAAGCACAAACATGAAGCTGCTCTAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGACGGAGCCTCTATTTaGTTTGGGTCTCCAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: IVNFHSLLPTPRGSCLRADGASI*FGSPAQ Trigger: TTGTGCTGGAGACCCAAACAAAATAGAGGCTCCGTC...CGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGGCGGATTTTGTCTGTGAATaGCTTGATCCCCACCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: IVNFHSLLPTPRGSCLRADFVCE*LDPHLG Trigger: TCCAAGGTGGGGATCAAGCAATTCACAGACAAAATC...CGCCCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS-3UTR CAA 90 bp | AGATCTTCTTGGATTTCACATAAGACAAAACTCCATGAGCTTTGTTGTTACACAGACGGAGCCTCTATTTaGTTTGGGTCTCCAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: RSSWISHKTKLHELCCYTDGASI*FGSPAQ Trigger: TTGTGCTGGAGACCCAAACAAAATAGAGGCTCCGTC...TGTGTAACAACAAAGCTCATGGAGTTTTGTCTTATGTGAAATCCAAGAAGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS TCA 72 bp | TCTCCTCCTGTGCACGGAGGTTGTGGGCCCCCAGTGTaGCTGTCATTGAGCTTCCAATGCAGTGAGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SPPVHGGCGPPV*LSLSFQCSEQP Trigger: CGGCTGCTCACTGCATTGGAAGCTCAATGACAGTCACACTGGGGGCCCACAACCTCCGTGCACAGGAGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS GCA 72 bp | GTGGGGCTTGACCTCATGGCCCCCGATGACCTCCTCTaGTCCATCTCCTACTGGCAGAAGAAAGATCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGLDLMAPDDLL*SISYWQKKDQE Trigger: CTCCTGATCTTTCTTCTGCCAGTAGGAGATGGAGCAGAGGAGGTCATCGGGGGCCATGAGGTCAAGCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS TCA 72 bp | TGCACGGAGGTTGTGGGCCCCCAGTGTGACTGTCATTaGGCTTCCAATGCAGTGAGCAGCCGTCAGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: CTEVVGPQCDCH*ASNAVSSRQHK Trigger: TTTGTGCTGACGGCTGCTCACTGCATTGGAAGCTCAATGACAGTCACACTGGGGGCCCACAACCTCCGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS TCA 72 bp | CAGCCTCTTCTAAGAGAGCAGATCCTTCAGTGGTATTaGTGGACGTTTTCCCCCAGCCAGCCACACTGCACA | + |
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Preference number: 6 (lower is better) Translates to: QPLLREQILQWY*WTFSPSQPHCT Trigger: TGTGCAGTGTGGCTGGCTGGGGGAAAACGTCCATCAATACCACTGAAGGATCTGCTCTCTTAGAAGAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS CAA 72 bp | TCAGCCTCTTCTAAGAGAGCAGATCCTTCAGTGGTATaGATGGACGTTTTCCCCCAGCCAGCCACACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SASSKRADPSVV*MDVFPQPATLH Trigger: GTGCAGTGTGGCTGGCTGGGGGAAAACGTCCATCAATACCACTGAAGGATCTGCTCTCTTAGAAGAGGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS CAA 72 bp | CCAGGCAACTTGAGGGGCCTCACATCTCTAGTCCCCTaGGCCTTACTCTCCAGCTTTAATAGCATGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: PGNLRGLTSLVP*ALLSSFNSMMS Trigger: TGACATCATGCTATTAAAGCTGGAGAGTAAGGCCAAGGGGACTAGAGATGTGAGGCCCCTCAAGTTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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| CDS CAA 72 bp | AATTGCTTGATCCCCACCTTGGACGGAGCCTCTATTTaGTTTGGGTCTCCAGCACAAATCTCTGTGATTTTG | + |
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Preference number: 6 (lower is better) Translates to: NCLIPTLDGASI*FGSPAQISVIL Trigger: CAAAATCACAGAGATTTGTGCTGGAGACCCAAACAAAATAGAGGCTCCGTCCAAGGTGGGGATCAAGCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225535.2 |
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| CDS CCA 72 bp | CATGATGTCATTGGTGTGATCCAGAGGATTATAGTCTaGGTGGGGAAGAGCTTTATTCACAGGAATAATCTG | + |
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Preference number: 6 (lower is better) Translates to: HDVIGVIQRIIV*VGKSFIHRNNL Trigger: CAGATTATTCCTGTGAATAAAGCTCTTCCCCACCCAGACTATAATCCTCTGGATCACACCAATGACATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015587.9 ENSMUST00000225535.2 |
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