Pregenerated sensors for GZMM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054206Ensembl transcript IDs: ENSMUST00000020549.4
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCTGGGACACTCCTGCAGGGCCCTaGCCCGGGGCCCACCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LVPSQPPLSRMVSQMIWDTPAGP*PGAHPG Trigger: ACCAGGGTGGGCCCCGGGCCAGGGCCCTGCAGGAGT...GTCCCAGATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR GCA 90 bp | TCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGCCCAGCCAGCTGTGCTaGACCAGGTACCTTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: SEAHLVPSQPPLSRMVSQPSQLC*TRYLLP Trigger: CGGCAGAAGGTACCTGGTGCAGCACAGCTGGCTGGG...CTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR GCA 90 bp | TATCAGGATTTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTCATCCACCTGGCCTTTaGCACACACCAGGGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: YQDLLVLRGTPSPFPAPAHPPGL*HTPGAL Trigger: GAGGGCCCCTGGTGTGTGGCAAAGGCCAGGTGGATG...AGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAAATCCTGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CCA 90 bp | TTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGGCTCAGACAGGCAGTaGGCAGCTGTCAATACCCAC | + |
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Preference number: 4 (lower is better) Translates to: LVLRGTPSPFPAPAIKNGGSDRQ*AAVNTH Trigger: GTGGGTATTGACAGCTGCCCACTGCCTGTCTGAGCC...ACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR GCA 90 bp | TTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATCTCCAGAGTCACCCTTaGAGGGGGCTTGGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLRGTPSPFPAPAIKNLQSHP*RGLGSC Trigger: GCAAGAGCCAAGCCCCCTGCAAGGGTGACTCTGGAG...ATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CCA 90 bp | CTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGTGAGGCCAGGATCTTaGAGATCATGGAGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGTPSPFPAPAIKNGVPVRPGS*RSWRLC Trigger: GCACAACCTCCATGATCTCCAAGATCCTGGCCTCAC...TGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGAGCAGTGGCCACAGGTaGCTTGAAGATGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHLVPSQPPLSRMVSQSSGHR*LEDVCA Trigger: TGCACAGACATCTTCAAGCCACCTGTGGCCACTGCT...CTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR TCA 90 bp | GGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATGCAGAGCTAGTGGTTTaGCATTCTTGCTGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTPSPFPAPAIKNGVPDDAELVV*HSCWAA Trigger: TGCAGCCCAGCAAGAATGTCAAACCACTAGCTCTGC...ATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR TCA 90 bp | GCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCGACCAAAGATTGGGGTaGCCAGCGACCAATGACCTT | + |
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Preference number: 4 (lower is better) Translates to: AHLVPSQPPLSRMVSQMIDQRLG*PATNDL Trigger: AAGGTCATTGGTCGCTGGTCACCCCAATCTTTGGTC...GATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR GCA 90 bp | CCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCTGGGAAGGGGGCTTGGCTCTTaGTCCCAGCCTTTAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: PSPFPAPAIKNGVPDDLGRGLGS*SQPLSI Trigger: TATGCTTAAAGGCTGGGAGCAAGAGCCAAGCCCCCT...TCCCAGATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CCA 90 bp | CTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCACACACACATGGGACTTaGCTTTCTGTAGAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGTPSPFPAPAIKNGVPHTHGT*LSVERP Trigger: TGGCCTCTCTACAGAAAGCCAAGTCCCATGTGTGTG...TGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CCA 90 bp | TTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATAGGATCCCATCCACCTaGCCTTTGCCACACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVLRGTPSPFPAPAIKNRIPST*PLPHTR Trigger: CCTGGTGTGTGGCAAAGGCCAGGTGGATGGGATCCT...ATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR TCA 90 bp | ACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCTGTGCAGGTTTTGGAGCTaGAAGACAGGATCCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSPFPAPAIKNGVPDDLCRFWS*KTGSHP Trigger: TGGATGGGATCCTGTCTTTCAGCTCCAAAACCTGCA...CAGATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR GCA 90 bp | ACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCTGAAATCTGTTGCCTGCTaGCCACAGTGTTTTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TPSPFPAPAIKNGVPDDLKSVAC*PQCFQG Trigger: GCCCTGAAAACACTGTGGGCAGCAGGCAACAGATTT...CAGATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR GCA 90 bp | TTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATAGATCATGGAGGTTGTaGAGGCCAAGCACCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLRGTPSPFPAPAIKNRSWRL*RPSTSF Trigger: GAAGCTGGTGCTTGGCCTGCACAACCTCCATGATCT...ATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CCA 90 bp | CCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCTGGGACTGTTGTTACACATTTaGGTATCCAGCACACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPFPAPAIKNGVPDDLGLLLHI*VSSTRR Trigger: TCTGCGTGTGCTGGATACCCAAATGTGTAACAACAG...TCCCAGATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS GCA 90 bp | CTGTTGTTACACATTTGGGTATCCAGCACACGCAGATCCAACTCCTaGAGGGCCCTGGCCCGGGGCCCACCCTGGTGGGTCATTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLHIWVSSTRRSNS*RALARGPPWWVIPQ Trigger: CTGGGGAATGACCCACCAGGGTGGGCCCCGGGCCAGGGCCCTGCAGGAGTTGGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | CTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAACCCTTGCAGGGGGCTaGGCTCTTGCTCCCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRGTPSPFPAPAIKNGVPTLAGG*ALAPSL Trigger: AAGGCTGGGAGCAAGAGCCAAGCCCCCTGCAAGGGT...TGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | ACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGATCTGCCATCCACCTGGCCTTaGCCACACACCAGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPSPFPAPAIKNGVPDDLPSTWP*PHTRGP Trigger: AGGGCCCCTGGTGTGTGGCAAAGGCCAGGTGGATGG...CAGATCATCTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 90 bp | AGGCCAAGCACCAGCTTCAGGTTCTGTAGCGGCTCAGACAGGCAGTaGGCAGCTGTCAATACCCACTTCCGATGCACAAGGACTCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RPSTSFRFCSGSDRQ*AAVNTHFRCTRTPP Trigger: TGGGGGAGTCCTTGTGCATCGGAAGTGGGTATTGACAGCTGCCCACTGCCTGTCTGAGCCGCTACAGAACCTGAAGCTGGTGCTTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCAGGGGGCTTGGCTCTaGCTCCCAGCCTTTAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLRGTPSPFPAPAIKNGVQGAWL*LPAFKH Trigger: ATGCTTAAAGGCTGGGAGCAAGAGCCAAGCCCCCTG...GACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCACACACATGGGACTaGGCTTTCTGTAGAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLRGTPSPFPAPAIKNGVPHTWD*AFCREA Trigger: GGCCTCTCTACAGAAAGCCAAGTCCCATGTGTGTGG...GACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | TTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATCCTCCAGAGTCACCCTaGCAGGGGGCTTGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLRGTPSPFPAPAIKNPPESP*QGAWLL Trigger: CAAGAGCCAAGCCCCCTGCAAGGGTGACTCTGGAGG...ATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS GCA 90 bp | ACATGGGACTTGGCTTTCTGTAGAGAGGCCATGTATGGGCGGGAGTaGGGGACTGCCTCTCGACCCCCAATGATCTGGGTCTCAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: TWDLAFCREAMYGRE*GTASRPPMIWVSNL Trigger: CAGATTTGAGACCCAGATCATTGGGGGTCGAGAGGCAGTCCCGCACTCCCGCCCATACATGGCCTCTCTACAGAAAGCCAAGTCCCATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 90 bp | CTGTCTATGAGGACACCGTTCCAGAAGCGGCTGTTGTTACACATTTaGGTATCCAGCACACGCAGATCCAACTCCTGCAGGGCCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LSMRTPFQKRLLLHI*VSSTRRSNSCRALA Trigger: GGCCAGGGCCCTGCAGGAGTTGGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTCATAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCGCTGTTGTTACACATTaGGGTATCCAGCACACGCAG | + |
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Preference number: 5 (lower is better) Translates to: VLRGTPSPFPAPAIKNGVAVVTH*GIQHTQ Trigger: CTGCGTGTGCTGGATACCCAAATGTGTAACAACAGC...GACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 90 bp | CTTCCTGATCCAGGAGCTGTAGGGGGCTACAGCAGTGGCCACAGGTaGCTTGAAGATGTCTGTGCAGGTTTTGGAGCTGAAAGACAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LPDPGAVGGYSSGHR*LEDVCAGFGAERQD Trigger: ATCCTGTCTTTCAGCTCCAAAACCTGCACAGACATCTTCAAGCCACCTGTGGCCACTGCTGTAGCCCCCTACAGCTCCTGGATCAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | TTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGAGGCCAGGATCTaGGAGATCATGGAGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: LLVLRGTPSPFPAPAIKNGEARI*EIMEVV Trigger: CACAACCTCCATGATCTCCAAGATCCTGGCCTCACC...ATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | TCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGTTCCAGAAGCGGCTGTaGTTACACATTTGGGTATCC | + |
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Preference number: 5 (lower is better) Translates to: SEAHLVPSQPPLSRMVSQFQKRL*LHIWVS Trigger: GGATACCCAAATGTGTAACAACAGCCGCTTCTGGAA...CTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | TCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATGGTGTCCCAGATGTCTGTGCAGGTTTaGGAGCTGAAAGACAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SEAHLVPSQPPLSRMVSQMSVQV*ELKDRI Trigger: GATCCTGTCTTTCAGCTCCAAAACCTGCACAGACAT...CTGGGACACCATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS-3UTR CAA 90 bp | TTATTGGTCCTCAGAGGCACACCTAGTCCCTTCCCAGCCCCCGCTATCAAGAATTGGGTCTCAAATCTGTaGCCTGCTGCCCACAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LLVLRGTPSPFPAPAIKNWVSNL*PAAHSV Trigger: AACACTGTGGGCAGCAGGCAACAGATTTGAGACCCA...ATTCTTGATAGCGGGGGCTGGGAAGGGACTAGGTGTGCCTCTGAGGACCAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS TCA 90 bp | GGGCTTGGCTCTTGCTCCCAGCCTTTAAGCATAGCATGCTGTCTATaGGGACACCGTTCCAGAAGCGGCTGTTGTTACACATTTGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: GLGSCSQPLSIACCL*GHRSRSGCCYTFGY Trigger: ATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTCATAGACAGCATGCTATGCTTAAAGGCTGGGAGCAAGAGCCAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS GCA 72 bp | GGGGCCCACCCTGGTGGGTCATTCCCCAGCCAGCTGTaGTGCACCAGGTACCTTCTGCCGGCTTGGATCGGG | + |
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Preference number: 6 (lower is better) Translates to: GAHPGGSFPSQL*CTRYLLPAWIG Trigger: CCCGATCCAAGCCGGCAGAAGGTACCTGGTGCAGCACAGCTGGCTGGGGAATGACCCACCAGGGTGGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 72 bp | GGCCCTCCAGAGTCACCCTTGCAGGGGGCTTGGCTCTaGCTCCCAGCCTTTAAGCATAGCATGCTGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: GPPESPLQGAWL*LPAFKHSMLSM Trigger: CATAGACAGCATGCTATGCTTAAAGGCTGGGAGCAAGAGCCAAGCCCCCTGCAAGGGTGACTCTGGAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 90 bp | GTCATTCCCCAGCCAGCTGTGCTGCACCAGGTACCTTCTGCCGGCTaGGATCGGGGCTTTCTTGGCAGAGCTAGTGGTTTGACATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: VIPQPAVLHQVPSAG*DRGFLGRASGLTFL Trigger: CAAGAATGTCAAACCACTAGCTCTGCCAAGAAAGCCCCGATCCAAGCCGGCAGAAGGTACCTGGTGCAGCACAGCTGGCTGGGGAATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 90 bp | GCTGTCTATGAGGACACCGTTCCAGAAGCGGCTGTTGTTACACATTaGGGTATCCAGCACACGCAGATCCAACTCCTGCAGGGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AVYEDTVPEAAVVTH*GIQHTQIQLLQGPG Trigger: GCCAGGGCCCTGCAGGAGTTGGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTCATAGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS GCA 72 bp | AAGGTGAGGCCAGGATCTTGGAGATCATGGAGGTTGTaGAGGCCAAGCACCAGCTTCAGGTTCTGTAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: KVRPGSWRSWRL*RPSTSFRFCSG Trigger: GCCGCTACAGAACCTGAAGCTGGTGCTTGGCCTGCACAACCTCCATGATCTCCAAGATCCTGGCCTCACCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 72 bp | ACCAGCTTCAGGTTCTGTAGCGGCTCAGACAGGCAGTaGGCAGCTGTCAATACCCACTTCCGATGCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: TSFRFCSGSDRQ*AAVNTHFRCTR Trigger: CCTTGTGCATCGGAAGTGGGTATTGACAGCTGCCCACTGCCTGTCTGAGCCGCTACAGAACCTGAAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 72 bp | CCAGGAGCTGTAGGGGGCTACAGCAGTGGCCACAGGTaGCTTGAAGATGTCTGTGCAGGTTTTGGAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PGAVGGYSSGHR*LEDVCAGFGAE Trigger: TTCAGCTCCAAAACCTGCACAGACATCTTCAAGCCACCTGTGGCCACTGCTGTAGCCCCCTACAGCTCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 90 bp | GCTACAGCAGTGGCCACAGGTGGCTTGAAGATGTCTGTGCAGGTTTaGGAGCTGAAAGACAGGATCCCATCCACCTGGCCTTTGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: ATAVATGGLKMSVQV*ELKDRIPSTWPLPH Trigger: GTGTGGCAAAGGCCAGGTGGATGGGATCCTGTCTTTCAGCTCCAAAACCTGCACAGACATCTTCAAGCCACCTGTGGCCACTGCTGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 72 bp | ACCCACTTCCGATGCACAAGGACTCCCCCACACACATaGGACTTGGCTTTCTGTAGAGAGGCCATGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: THFRCTRTPPHT*DLAFCREAMYG Trigger: CCCATACATGGCCTCTCTACAGAAAGCCAAGTCCCATGTGTGTGGGGGAGTCCTTGTGCATCGGAAGTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 72 bp | AATGGCTTCCCGGATGTAGAAGGTGAGGCCAGGATCTaGGAGATCATGGAGGTTGTGCAGGCCAAGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: NGFPDVEGEARI*EIMEVVQAKHQ Trigger: CTGGTGCTTGGCCTGCACAACCTCCATGATCTCCAAGATCCTGGCCTCACCTTCTACATCCGGGAAGCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CCA 72 bp | AGGACACCGTTCCAGAAGCGGCTGTTGTTACACATTTaGGTATCCAGCACACGCAGATCCAACTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RTPFQKRLLLHI*VSSTRRSNSCR Trigger: CCTGCAGGAGTTGGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 72 bp | GAGGACACCGTTCCAGAAGCGGCTGTTGTTACACATTaGGGTATCCAGCACACGCAGATCCAACTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EDTVPEAAVVTH*GIQHTQIQLLQ Trigger: CTGCAGGAGTTGGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS GCA 72 bp | CTTGGCAGAGCTAGTGGTTTGACATTCTTGCTGGGCTaGACTCGTCTATCTAGCTTAAGCAGTGCCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LGRASGLTFLLG*TRLSSLSSARS Trigger: CGACCTGGCACTGCTTAAGCTAGATAGACGAGTGCAGCCCAGCAAGAATGTCAAACCACTAGCTCTGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 90 bp | AAGCATAGCATGCTGTCTATGAGGACACCGTTCCAGAAGCGGCTGTaGTTACACATTTGGGTATCCAGCACACGCAGATCCAACTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KHSMLSMRTPFQKRL*LHIWVSSTRRSNSC Trigger: GCAGGAGTTGGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTCATAGACAGCATGCTATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS CAA 72 bp | ATGCTGTCTATGAGGACACCGTTCCAGAAGCGGCTGTaGTTACACATTTGGGTATCCAGCACACGCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: MLSMRTPFQKRL*LHIWVSSTRRS Trigger: GGATCTGCGTGTGCTGGATACCCAAATGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTCATAGACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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| CDS TCA 72 bp | TCTTGCTCCCAGCCTTTAAGCATAGCATGCTGTCTATaGGGACACCGTTCCAGAAGCGGCTGTTGTTACACA | + |
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Preference number: 6 (lower is better) Translates to: SCSQPLSIACCL*GHRSRSGCCYT Trigger: TGTGTAACAACAGCCGCTTCTGGAACGGTGTCCTCATAGACAGCATGCTATGCTTAAAGGCTGGGAGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020549.4 |
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