Pregenerated sensors for GZMG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040284Ensembl transcript IDs: ENSMUST00000015578.5
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTTATTTATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTaGTTCTTGCCTGAGGTCGGACAGGCTGGTCAGGCACGGGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: EVIYCEFSFFAAQSM*FLPEVGQAGQARVV Trigger: AACCACCCGTGCCTGACCAGCCTGTCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAATAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| 3UTR CCA 72 bp | TATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTaGTTCTTGCCTGAGGTCGGACAGGCTGGTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: YCEFSFFAAQSM*FLPEVGQAGQA Trigger: TGCCTGACCAGCCTGTCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGACTGTGGCTTCACCTCATaGCCGCCGATGATCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPSPCGSCLRSDCGFTS*PPMISS Trigger: AGAGGAGATCATCGGCGGCCATGAGGTGAAGCCACA...GTCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGAACTGCACACATCCCCTaGCTTCACCCTGGCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAQSMWFLPEVGTAHIP*LHPGIG Trigger: CCCAATGCCAGGGTGAAGCCAGGGGATGTGTGCAGT...TCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR TCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGCCTCGTCCTCCTGGATaGTCAGTTGAGCCTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPSPCGSCLRSPRPPG*SVEPLA Trigger: TGCGAGAGGCTCAACTGATCATCCAGGAGGACGAGG...CGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCCTGGATGATCAGTTaGGCCTCTCGCAGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FIVNFHSLLPSPCGSCLRSWMIS*ASRRRA Trigger: TGCCCGCCTGCGAGAGGCTCAACTGATCATCCAGGA...CCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR TCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGACAGTGTGACTGTCATTaGCCTGTTTCTGCAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAQSMWFLPEVGQCDCH*PVSAVS Trigger: GCTCACTGCAGAAACAGGTCAATGACAGTCACACTG...TCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR GCA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGGCCGATGATCTCCTCTaGTCCAGCTCTGAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FIVNFHSLLPSPCGSCLRADDLL*SSSERQ Trigger: CTGCCTCTCAGAGCTGGAGCAGAGGAGATCATCGGC...CCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR GCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGTCGCAGGCGGGCAGATaGTTTAGTGGCATTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPSPCGSCLRSSQAGR*FSGIDG Trigger: TCCATCAATGCCACTAAAGCATCTGCCCGCCTGCGA...CGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR TCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGAGCACAAAATCATCTTaGACCAAGAAGCCTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPSPCGSCLRSSTKSS*TKKPPQ Trigger: CTGCGGAGGCTTCTTGGTTCAAGATGATTTTGTGCT...CGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGGACCTGTTTCTGCAGTaGGCAGCCGTCAGCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: FIVNFHSLLPSPCGSCLRDLFLQ*AAVSTK Trigger: TTTTGTGCTGACGGCTGCTCACTGCAGAAACAGGTC...CCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGACTATTAAAAGCTGGATaGGGAATGGCTTTTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAQSMWFLPEVGLLKAG*GMAFAT Trigger: TGTGGCAAAAGCCATTCCCCATCCAGCTTTTAATAG...TCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| 3UTR CAA 72 bp | GCACTCTGGAGGTTATTTATTGTGAATTTTCATTCTTaGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: ALWRLFIVNFHS*LPSPCGSCLRS Trigger: CGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAATAACCTCCAGAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS GCA 90 bp | CTCGTCCTCCTGGATGATCAGTTGAGCCTCTCGCAGGCGGGCAGATaGTTTAGTGGCATTGATGGATGTTTTCCCCCAGCCAGCCACACT | + |
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Preference number: 5 (lower is better) Translates to: LVLLDDQLSLSQAGR*FSGIDGCFPPASHT Trigger: AGTGTGGCTGGCTGGGGGAAAACATCCATCAATGCCACTAAAGCATCTGCCCGCCTGCGAGAGGCTCAACTGATCATCCAGGAGGACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CAA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGATCCTTAGCCTTGATGTaGTGGGCCCCCAGTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: CEFSFFAAQSMWFLPEVGSLALM*WAPSVT Trigger: AGTCACACTGGGGGCCCACAACATCAAGGCTAAGGA...TCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CAA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGGGCTTCACCCTGGCATaGGGTCTGGGCAACTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FIVNFHSLLPSPCGSCLRGFTLA*GLGNLR Trigger: CCTCAAGTTGCCCAGACCCAATGCCAGGGTGAAGCC...CCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CAA 90 bp | GTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGACGATGCTTTAGTGGCATaGATGGATGTTTTCCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VNFHSLLPSPCGSCLRSDDALVA*MDVFPQ Trigger: CTGGGGGAAAACATCCATCAATGCCACTAAAGCATC...GTCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CAA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTCGGACAGCACAAAATCATCTaGAACCAAGAAGCCTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: CEFSFFAAQSMWFLPEVGQHKII*NQEASA Trigger: TGCGGAGGCTTCTTGGTTCAAGATGATTTTGTGCTG...TCCGACCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS-3UTR CAA 90 bp | TTTATTGTGAATTTTCATTCTTTGCTGCCCAGTCCATGTGGTTCTTGCCTGAGGTTGGGTCTGGGCAACTaGAGGGGCCTCACAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: FIVNFHSLLPSPCGSCLRLGLGN*RGLTAL Trigger: TAAAGCTGTGAGGCCCCTCAAGTTGCCCAGACCCAA...CCTCAGGCAAGAACCACATGGACTGGGCAGCAAAGAATGAAAATTCACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS CCA 90 bp | TGTGCTTATCCACGGCAGGAAGTGCACAACCTTAGTGAAGACTCCTaGAGTGATTGTCCTGTTTATTCCATAGGATACAACTCCATAAGC | + |
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Preference number: 5 (lower is better) Translates to: CAYPRQEVHNLSEDS*SDCPVYSIGYNSIS Trigger: GCTTATGGAGTTGTATCCTATGGAATAAACAGGACAATCACTCCAGGAGTCTTCACTAAGGTTGTGCACTTCCTGCCGTGGATAAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS CCA 90 bp | AATAACATAATGTCATTGGTGCCATGCTTTCTATTAAAAGCTGGATaGGGAATGGCTTTTGCCACAGGGATGATCTGCTGTGTCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: NNIMSLVPCFLLKAG*GMAFATGMICCVSS Trigger: GGAGGAGACACAGCAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGCTTTTAATAGAAAGCATGGCACCAATGACATTATGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS GCA 72 bp | CTGGATGATCAGTTGAGCCTCTCGCAGGCGGGCAGATaGTTTAGTGGCATTGATGGATGTTTTCCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LDDQLSLSQAGR*FSGIDGCFPPA Trigger: GGCTGGGGGAAAACATCCATCAATGCCACTAAAGCATCTGCCCGCCTGCGAGAGGCTCAACTGATCATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS CCA 72 bp | ATGATCTGCTGTGTCTCCTCCTTAGCCTTGATGTTGTaGGCCCCCAGTGTGACTGTCATTGACCTGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: MICCVSSLALML*APSVTVIDLFL Trigger: CAGAAACAGGTCAATGACAGTCACACTGGGGGCCCACAACATCAAGGCTAAGGAGGAGACACAGCAGATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS GCA 72 bp | AGCAGCTTCATGTTTGTGCTTATCCACGGCAGGAAGTaGACAACCTTAGTGAAGACTCCTGGAGTGATTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSFMFVLIHGRK*TTLVKTPGVIV Trigger: GACAATCACTCCAGGAGTCTTCACTAAGGTTGTGCACTTCCTGCCGTGGATAAGCACAAACATGAAGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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| CDS CAA 72 bp | CTGGGCAACTTGAGGGGCCTCACAGCTTTAGTTCTCTaGGCCTTACTCTCCAGTTTTAATAACATAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGNLRGLTALVL*ALLSSFNNIMS Trigger: TGACATTATGTTATTAAAACTGGAGAGTAAGGCCAAGAGAACTAAAGCTGTGAGGCCCCTCAAGTTGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015578.5 |
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