Pregenerated sensors for GZME (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022156Ensembl transcript IDs: ENSMUST00000089549.8
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTTATTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTaGTTCTTGCCTGAGGTCGGACAGGCTGGTCAGGCACGGGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: EVIYCEFSFFAAHST*FLPEVGQAGQARVV Trigger: AACCACCCGTGCCTGACCAGCCTGTCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAATAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| 3UTR CCA 72 bp | TATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTaGTTCTTGCCTGAGGTCGGACAGGCTGGTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: YCEFSFFAAHST*FLPEVGQAGQA Trigger: TGCCTGACCAGCCTGTCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGTCCTGGATGACCAGTTaGGCCTCTCGCAGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPTPRGSCLRSSWMTS*ASRRRA Trigger: TGCCCGCCTGCGAGAGGCTCAACTGGTCATCCAGGA...CGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR GCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGACGCCGATGATCTCCTCTaGTCCAGCTCCAAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPTPRGSCLRSDADDLL*SSSKRQ Trigger: CTGCCTCTTGGAGCTGGAGCAGAGGAGATCATCGGC...GTCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CCA 90 bp | TATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGTAGGGGCGGGAGTGTaGCTTCACCACATGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: YCEFSFFAAHSTWFLPEVVGAGV*LHHMAA Trigger: GGCGGCCATGTGGTGAAGCCACACTCCCGCCCCTAC...GACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGACGTCCTGTTCCTGCAGTaGGCAGCAGTCAGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPTPRGSCLRSDVLFLQ*AAVSTK Trigger: CTTTGTGCTGACTGCTGCTCACTGCAGGAACAGGAC...GTCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CCA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGACTGTGGCTTCACCACATaGCCGCCGATGATCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VNFHSLLPTPRGSCLRSDCGFTT*PPMISS Trigger: AGAGGAGATCATCGGCGGCCATGTGGTGAAGCCACA...GTCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR GCA 90 bp | TATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCCCCAGCCAGCCACACTaGACACATCCCCTGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YCEFSFFAAHSTWFLPEVPSQPH*THPLAS Trigger: TGAAGCCAGGGGATGTGTGCAGTGTGGCTGGCTGGG...GACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGTGTGGGCCCCCAGTGTaGCTGTCATTGTCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IYCEFSFFAAHSTWFLPECGPPV*LSLSCS Trigger: GGAACAGGACAATGACAGTCACACTGGGGGCCCACA...CTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGCCTCATCCTCCTGGATaGCCAGTTGAGCCTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: IYCEFSFFAAHSTWFLPEPHPPG*PVEPLA Trigger: TGCGAGAGGCTCAACTGGTCATCCAGGAGGATGAGG...CTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGCAGCTTCATGTTCCTaGTTATCCACGGCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPTPRGSCLRSAASCS*LSTAGS Trigger: ACTTCCTGCCGTGGATAAGCAGGAACATGAAGCTGC...CGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | ATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGAGCACAAAGTCATCTTaGACCAAGAAGCCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: IVNFHSLLPTPRGSCLRSSTKSS*TKKPPQ Trigger: CTGTGGAGGCTTCTTGGTTCAAGATGACTTTGTGCT...CGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGACCCCAGAGTCACCCTTaGAAGGAGTCTTTATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAHSTWFLPEVGPQSHP*KESLFS Trigger: AGAAAATAAAGACTCCTTTCAAGGGTGACTCTGGGG...TCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR GCA 90 bp | TATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCTCATTGTCCTGTTCCTaGAGTGAGCAGCAGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YCEFSFFAAHSTWFLPEVSLSCS*SEQQSA Trigger: TGCTGACTGCTGCTCACTGCAGGAACAGGACAATGA...GACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CCA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGAAGTGGCATTATAATCTaGATGGGGAATGGCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CEFSFFAAHSTWFLPEVGSGIII*MGNGFC Trigger: GCAAAAGCCATTCCCCATCCAGATTATAATGCCACT...TCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGCTTAGTGAAGACTCCTaGAGAGATTGTCCTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: IYCEFSFFAAHSTWFLPELSEDS*RDCPVF Trigger: AAAAACAGGACAATCTCTTCAGGAGTCTTCACTAAG...CTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CAA 90 bp | GTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGACTTGGGTCTGGGCAACTaGAGGGGTCTCACAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: VNFHSLLPTPRGSCLRSDLGLGN*RGLTAL Trigger: TAAAGCTGTGAGACCCCTCAAGTTGCCCAGACCCAA...GTCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CAA 90 bp | TGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCGGACCCCCAGAGTCACCCTaGAAAGGAGTCTTTATTTTC | + |
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Preference number: 5 (lower is better) Translates to: CEFSFFAAHSTWFLPEVGPPESP*KGVFIF Trigger: GAAAATAAAGACTCCTTTCAAGGGTGACTCTGGGGG...TCCGACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS GCA 90 bp | ACTGAAGAAGGCAGTGGCATTATAATCTGGATGGGGAATGGCTTTTaGCACAGGGATGATCTGCTGTGTCTCCTCCTTAGCCTTGATGTT | + |
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Preference number: 5 (lower is better) Translates to: TEEGSGIIIWMGNGF*HRDDLLCLLLSLDV Trigger: AACATCAAGGCTAAGGAGGAGACACAGCAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGATTATAATGCCACTGCCTTCTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CAA 90 bp | TATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGGTCTGTCGGAAACGTTTTTaGCATTCCTCATCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: YCEFSFFAAHSTWFLPEVCRKRF*HSSSSW Trigger: CCAGGAGGATGAGGAATGCAAAAAACGTTTCCGACA...GACCTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTGTGAATTTTCATTCTTTGCTGCCCACTCCACGTGGTTCTTGCCTGAGAGATTGTCCTGTTTTTaGCATAGGCTAAAAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: IYCEFSFFAAHSTWFLPERLSCF*HRLKVH Trigger: ATGGACTTTTAGCCTATGCAAAAAACAGGACAATCT...CTCAGGCAAGAACCACGTGGAGTGGGCAGCAAAGAATGAAAATTCACAATAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS GCA 72 bp | TCTGGATGGGGAATGGCTTTTGCCACAGGGATGATCTaGTGTGTCTCCTCCTTAGCCTTGATGTTGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SGWGMAFATGMI*CVSSLALMLWA Trigger: GGCCCACAACATCAAGGCTAAGGAGGAGACACAGCAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS CCA 72 bp | ATGATCTGCTGTGTCTCCTCCTTAGCCTTGATGTTGTaGGCCCCCAGTGTGACTGTCATTGTCCTGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: MICCVSSLALML*APSVTVIVLFL Trigger: CAGGAACAGGACAATGACAGTCACACTGGGGGCCCACAACATCAAGGCTAAGGAGGAGACACAGCAGATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS GCA 72 bp | GGCAGTGGCATTATAATCTGGATGGGGAATGGCTTTTaGCACAGGGATGATCTGCTGTGTCTCCTCCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: GSGIIIWMGNGF*HRDDLLCLLLS Trigger: GCTAAGGAGGAGACACAGCAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGATTATAATGCCACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS CAA 90 bp | GCATTGGGTCTGGGCAACTTGAGGGGTCTCACAGCTTTAGTTCTCTaGGCCTTACTCTCCAGCTTTAACAGCATGATGTCACTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALGLGNLRGLTALVL*ALLSSFNSMMSLKK Trigger: CTTCTTCAGTGACATCATGCTGTTAAAGCTGGAGAGTAAGGCCAAGAGAACTAAAGCTGTGAGACCCCTCAAGTTGCCCAGACCCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS CAA 72 bp | CTGGGCAACTTGAGGGGTCTCACAGCTTTAGTTCTCTaGGCCTTACTCTCCAGCTTTAACAGCATGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGNLRGLTALVL*ALLSSFNSMMS Trigger: TGACATCATGCTGTTAAAGCTGGAGAGTAAGGCCAAGAGAACTAAAGCTGTGAGACCCCTCAAGTTGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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| CDS CCA 72 bp | CATGATGTCACTGAAGAAGGCAGTGGCATTATAATCTaGATGGGGAATGGCTTTTGCCACAGGGATGATCTG | + |
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Preference number: 6 (lower is better) Translates to: HDVTEEGSGIII*MGNGFCHRDDL Trigger: CAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGATTATAATGCCACTGCCTTCTTCAGTGACATCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089549.8 |
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