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Pregenerated sensors for GZMC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079186

Ensembl transcript IDs: ENSMUST00000015585.4

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TATCCACGATACAAAACTCAAAACTCTTGTGAAGACTTGTGGAGCTaGTCCATCAGTTTGCCCGTAGGAGACGATGCCTGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: YPRYKTQNSCEDLWS*SISLPVGDDACSCS
Trigger: AGAGCAGCTGCAGGCATCGTCTCCTACGGGCAAACTGATGGATCAGCTCCACAAGTCTTCACAAGAGTTTTGAGTTTTGTATCGTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS TCA 90 bp AAGCGGGCCTCCAGAATCCTCCTCAAAGGAAGCTCCCTTGATCTTTaGGTCTCCCACACATATCTCATTAGCTCTGTTGTAAGAACTTTG +
Preference number: 5 (lower is better)
Translates to: KRASRILLKGSSLDL*VSHTYLISSVVRTL
Trigger: CAAAGTTCTTACAACAGAGCTAATGAGATATGTGTGGGAGACTCAAAGATCAAGGGAGCTTCCTTTGAGGAGGATTCTGGAGGCCCGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS GCA 90 bp ATTAGAACGGTCATCAGGATTATAGTCTGGATGGGGAATGGCTTTTaGCACAGGGATGATCTGCTGTGTCTCCTCCTTAGCCTTGATGTT +
Preference number: 5 (lower is better)
Translates to: IRTVIRIIVWMGNGF*HRDDLLCLLLSLDV
Trigger: AACATCAAGGCTAAGGAGGAGACACAGCAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGACTATAATCCTGATGACCGTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS GCA 72 bp GTGGAGCTGATCCATCAGTTTGCCCGTAGGAGACGATaGCTGCAGCTGCTCTTTTACACACAAGCGGGCCTC +
Preference number: 6 (lower is better)
Translates to: VELIHQFARRRR*LQLLFYTQAGL
Trigger: GAGGCCCGCTTGTGTGTAAAAGAGCAGCTGCAGGCATCGTCTCCTACGGGCAAACTGATGGATCAGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS CCA 72 bp TACCTTTCCCCAACCAGCCACATAGCACTCATCCCCTaGCTTCACATGAGCATTGCGCCTGGGCAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: YLSPTSHIALIP*LHMSIAPGQVE
Trigger: CTCAACCTGCCCAGGCGCAATGCTCATGTGAAGCCAGGGGATGAGTGCTATGTGGCTGGTTGGGGAAAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS TCA 72 bp GCCCCCAGTGTGACTGTCATTGAGCTTCCTTTGCAGTaGGCAGCTGTTAGCACGAATTTGTCTCGAACCAGG +
Preference number: 6 (lower is better)
Translates to: APSVTVIELPLQ*AAVSTNLSRTR
Trigger: CCTGGTTCGAGACAAATTCGTGCTAACAGCTGCTCACTGCAAAGGAAGCTCAATGACAGTCACACTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS CAA 90 bp GCATTGCGCCTGGGCAGGTTGAGGGGCCTCACAGCTCTAGTCCTCTaGGCATTTCTCACCAGCTTTAATAGCATGATGTCATTAGAACGG +
Preference number: 6 (lower is better)
Translates to: ALRLGRLRGLTALVL*AFLTSFNSMMSLER
Trigger: CCGTTCTAATGACATCATGCTATTAAAGCTGGTGAGAAATGCCAAGAGGACTAGAGCTGTGAGGCCCCTCAACCTGCCCAGGCGCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS CAA 72 bp CTGGGCAGGTTGAGGGGCCTCACAGCTCTAGTCCTCTaGGCATTTCTCACCAGCTTTAATAGCATGATGTCA +
Preference number: 6 (lower is better)
Translates to: LGRLRGLTALVL*AFLTSFNSMMS
Trigger: TGACATCATGCTATTAAAGCTGGTGAGAAATGCCAAGAGGACTAGAGCTGTGAGGCCCCTCAACCTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS TCA 72 bp ATGATCTGCTGTGTCTCCTCCTTAGCCTTGATGTTGTaGGCCCCCAGTGTGACTGTCATTGAGCTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: MICCVSSLALML*APSVTVIELPL
Trigger: CAAAGGAAGCTCAATGACAGTCACACTGGGGGCTCACAACATCAAGGCTAAGGAGGAGACACAGCAGATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS GCA 72 bp GTCATCAGGATTATAGTCTGGATGGGGAATGGCTTTTaGCACAGGGATGATCTGCTGTGTCTCCTCCTTAGC +
Preference number: 6 (lower is better)
Translates to: VIRIIVWMGNGF*HRDDLLCLLLS
Trigger: GCTAAGGAGGAGACACAGCAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGACTATAATCCTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS CCA 72 bp CATGATGTCATTAGAACGGTCATCAGGATTATAGTCTaGATGGGGAATGGCTTTTGCCACAGGGATGATCTG +
Preference number: 6 (lower is better)
Translates to: HDVIRTVIRIIV*MGNGFCHRDDL
Trigger: CAGATCATCCCTGTGGCAAAAGCCATTCCCCATCCAGACTATAATCCTGATGACCGTTCTAATGACATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS TCA 72 bp TCCAGAATCCTCCTCAAAGGAAGCTCCCTTGATCTTTaGGTCTCCCACACATATCTCATTAGCTCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: SRILLKGSSLDL*VSHTYLISSVV
Trigger: TACAACAGAGCTAATGAGATATGTGTGGGAGACTCAAAGATCAAGGGAGCTTCCTTTGAGGAGGATTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4
CDS GCA 72 bp CATCTTCTTCCCACCAACTTTCAGAAACTCATAATATaGCATGTAGGGACGGGAATGTGGACTGATCTCATT +
Preference number: 6 (lower is better)
Translates to: HLLPTNFQKLII*HVGTGMWTDLI
Trigger: AATGAGATCAGTCCACATTCCCGTCCCTACATGGCATATTATGAGTTTCTGAAAGTTGGTGGGAAGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015585.4