Pregenerated sensors for GZMA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023132Ensembl transcript IDs: ENSMUST00000023897.7, ENSMUST00000224282.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACAAATCTCCCCCATCCTaGTACTCGGCATCTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KLILFVIRHRSDRDGVKDKSPPS*YSASGS Trigger: GGAACCAGATGCCGAGTAGCAGGATGGGGGAGATTT...GTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR GCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATCACATAGCAGAGGGCTaGCAGAATCCCCATTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHHIAEG*QNPHCR Trigger: CCTGCAATGGGGATTCTGGCAGCCCTCTGCTATGTG...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR GCA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATAAAATCTCCCCCATCCTaGTACTCGGCATCTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LILFVIRHRSDRDGVKDIKSPPS*YSASGS Trigger: GGAACCAGATGCCGAGTAGCAGGATGGGGGAGATTT...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATTTTCCCACGTTACAGTaGGCAGCAGTCAACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHFPTLQ*AAVNTQ Trigger: CTGGGTGTTGACTGCTGCCCACTGTAACGTGGGAAA...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CCA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATATTTCCCACGTTACAGTaGGCAGCAGTCAACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LILFVIRHRSDRDGVKDIFPTLQ*AAVNTQ Trigger: CTGGGTGTTGACTGCTGCCCACTGTAACGTGGGAAA...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATAGTTCTGGCTCCTTATTaGTTGAGTGAGCCCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LILFVIRHRSDRDGVKDIVLAPY*LSEPQE Trigger: TTCTTGGGGCTCACTCAATCAATAAGGAGCCAGAAC...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | AAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACCCCTTTTTAGGTAGGTaGAGGATAGCCACATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KLILFVIRHRSDRDGVKDPFLGR*RIATFL Trigger: CAGAAATGTGGCTATCCTTCACCTACCTAAAAAGGG...GTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATAGTTTCAGAGGGAGCTaGCTTATTGCCAAATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHSFRGS*LIAKSP Trigger: GGGAGATTTGGCAATAAGTCAGCTCCCTCTGAAACT...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAAGTTTCAGAGGGAGCTaGCTTATTGCCAAATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FKLILFVIRHRSDRDGVKSFRGS*LIAKSP Trigger: GGGAGATTTGGCAATAAGTCAGCTCCCTCTGAAACT...TTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATTCGGCATCTGGTTCCTaGTTTCACATCATCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHSASGS*FHIISL Trigger: AAGGGAGATGATGTGAAACCAGGAACCAGATGCCGA...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAATCGGCATCTGGTTCCTaGTTTCACATCATCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: FKLILFVIRHRSDRDGVKSASGS*FHIISL Trigger: AAGGGAGATGATGTGAAACCAGGAACCAGATGCCGA...TTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CCA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACTGCTACTCGGCATCTaGTTCCTGGTTTCACATCAT | + |
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Preference number: 4 (lower is better) Translates to: LILFVIRHRSDRDGVKDILLLGI*FLVSHH Trigger: ATGATGTGAAACCAGGAACCAGATGCCGAGTAGCAG...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAACCCTTTTTAGGTAGGTaGAGGATAGCCACATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FKLILFVIRHRSDRDGVKPFLGR*RIATFL Trigger: CAGAAATGTGGCTATCCTTCACCTACCTAAAAAGGG...TTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATTCTTGGAAGACAGGTTaGTCTCCCAACTCAAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHSWKTG*SPNSRV Trigger: TACTCTTGAGTTGGGAGATCAACCTGTCTTCCAAGA...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | TTCAAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAATCTTCTTTATCCAATTaGGGTGTTTATCTGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FKLILFVIRHRSDRDGVKSSLSN*GVYLRG Trigger: TCCTCTCAGATAAACACCTCAATTGGATAAAGAAGA...TTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR TCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATTCTTCTTTATCCAATTaGGGTGTTTATCTGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHSSLSN*GVYLRG Trigger: TCCTCTCAGATAAACACCTCAATTGGATAAAGAAGA...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR GCA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATAGCATGGATAGGGAAATaGTTTCTTAACAGTCAATAT | + |
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Preference number: 4 (lower is better) Translates to: LILFVIRHRSDRDGVKDIAWIGK*FLNSQY Trigger: ATATTGACTGTTAAGAAAGCATTTCCCTATCCATGC...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR GCA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATGCATGGATAGGGAAATaGTTTCTTAACAGTCAATAT | + |
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Preference number: 4 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHAWIGK*FLNSQY Trigger: ATATTGACTGTTAAGAAAGCATTTCCCTATCCATGC...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS TCA 90 bp | GTCTATGACAGTGATGTTGACTTCTCTCAGAGTTTCAGAGGGAGCTaGCTTATTGCCAAATCTCCCCCATCCTGCTACTCGGCATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: VYDSDVDFSQSFRGS*LIAKSPPSCYSASG Trigger: ACCAGATGCCGAGTAGCAGGATGGGGGAGATTTGGCAATAAGTCAGCTCCCTCTGAAACTCTGAGAGAAGTCAACATCACTGTCATAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS TCA 90 bp | CACAGAACCCTTCATAATCTTCTTTATCCAATTGAGGTGTTTATCTaGGAGGAAAGTATAGACACCAGGCCATCGGCGATCTCCACACTT | + |
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Preference number: 5 (lower is better) Translates to: HRTLHNLLYPIEVFI*EESIDTRPSAISTL Trigger: AAGTGTGGAGATCGCCGATGGCCTGGTGTCTATACTTTCCTCTCAGATAAACACCTCAATTGGATAAAGAAGATTATGAAGGGTTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATGAGGGAGCTGACTTATaGCCAAATCTCCCCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHEGADL*PNLPHP Trigger: AGGATGGGGGAGATTTGGCAATAAGTCAGCTCCCTC...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATAGAGGGAGCTGACTTATaGCCAAATCTCCCCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LILFVIRHRSDRDGVKDIEGADL*PNLPHP Trigger: AGGATGGGGGAGATTTGGCAATAAGTCAGCTCCCTC...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATTCACAGCCTCCTCTCTaGGAAGACAGGTTGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHSQPPL*EDRLIS Trigger: GGAGATCAACCTGTCTTCCAAGAGAGGAGGCTGTGA...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224282.2 |
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| CDS TCA 90 bp | ATGGTATTTGAACTAAGTTTAAGTAGAGCCATATACGGTCTTGAGTaGGGAACAACCGTGTCTCCTCCAATGATTCTTTCACAGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: MVFELSLSRAIYGLE*GTTVSPPMILSQPP Trigger: AGGAGGCTGTGAAAGAATCATTGGAGGAGACACGGTTGTTCCTCACTCAAGACCGTATATGGCTCTACTTAAACTTAGTTCAAATACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS TCA 90 bp | TTCTTAACAGTCAATATCTGTTGTTCTGGCTCCTTATTGATTGAGTaGGCCCCAAGAATGAACTTAGATCTCTTTCCCACGTTACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: FLTVNICCSGSLLIE*APRMNLDLFPTLQW Trigger: CCACTGTAACGTGGGAAAGAGATCTAAGTTCATTCTTGGGGCTCACTCAATCAATAAGGAGCCAGAACAACAGATATTGACTGTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAACTCTTGGAAGACAGGTaGATCTCCCAACTCAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: FKLILFVIRHRSDRDGVKLLEDR*ISQLKS Trigger: ACTCTTGAGTTGGGAGATCAACCTGTCTTCCAAGAG...TTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | TTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATATCTATGACAGTGATGTaGACTTCTCTCAGAGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LILFVIRHRSDRDGVKDISMTVM*TSLRVS Trigger: TGAAACTCTGAGAGAAGTCAACATCACTGTCATAGA...TATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | ATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAGACATACATATCTTCTTTATCCAATaGAGGTGTTTATCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ILFVIRHRSDRDGVKDIHIFFIQ*RCLSER Trigger: CCTCTCAGATAAACACCTCAATTGGATAAAGAAGAT...ATGTATGTCTTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGTTGATTTTATTTGTGATCAGACACAGAAGTGACAGGGATGGAGTGAAAATCTTCTTTATCCAATaGAGGTGTTTATCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FKLILFVIRHRSDRDGVKIFFIQ*RCLSER Trigger: CCTCTCAGATAAACACCTCAATTGGATAAAGAAGAT...TTTCACTCCATCCCTGTCACTTCTGTGTCTGATCACAAATAAAATCAACTTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS CAA 90 bp | ACAGTGATGTTGACTTCTCTCAGAGTTTCAGAGGGAGCTGACTTATaGCCAAATCTCCCCCATCCTGCTACTCGGCATCTGGTTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TVMLTSLRVSEGADL*PNLPHPATRHLVPG Trigger: ACCAGGAACCAGATGCCGAGTAGCAGGATGGGGGAGATTTGGCAATAAGTCAGCTCCCTCTGAAACTCTGAGAGAAGTCAACATCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS CAA 72 bp | TTGACTTCTCTCAGAGTTTCAGAGGGAGCTGACTTATaGCCAAATCTCCCCCATCCTGCTACTCGGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LTSLRVSEGADL*PNLPHPATRHL Trigger: CAGATGCCGAGTAGCAGGATGGGGGAGATTTGGCAATAAGTCAGCTCCCTCTGAAACTCTGAGAGAAGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS TCA 72 bp | AGTGATGTTGACTTCTCTCAGAGTTTCAGAGGGAGCTaGCTTATTGCCAAATCTCCCCCATCCTGCTACTCG | + |
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Preference number: 6 (lower is better) Translates to: SDVDFSQSFRGS*LIAKSPPSCYS Trigger: CGAGTAGCAGGATGGGGGAGATTTGGCAATAAGTCAGCTCCCTCTGAAACTCTGAGAGAAGTCAACATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS CAA 90 bp | GGAACAACCGTGTCTCCTCCAATGATTCTTTCACAGCCTCCTCTCTaGGAAGACAGGTTGATCTCCCAACTCAAGAGTATTTCATTCATT | + |
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Preference number: 6 (lower is better) Translates to: GTTVSPPMILSQPPL*EDRLISQLKSISFI Trigger: AATGAATGAAATACTCTTGAGTTGGGAGATCAACCTGTCTTCCAAGAGAGGAGGCTGTGAAAGAATCATTGGAGGAGACACGGTTGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224282.2 |
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| CDS TCA 72 bp | GTCAATATCTGTTGTTCTGGCTCCTTATTGATTGAGTaGGCCCCAAGAATGAACTTAGATCTCTTTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: VNICCSGSLLIE*APRMNLDLFPT Trigger: CGTGGGAAAGAGATCTAAGTTCATTCTTGGGGCTCACTCAATCAATAAGGAGCCAGAACAACAGATATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS TCA 72 bp | GAACTAAGTTTAAGTAGAGCCATATACGGTCTTGAGTaGGGAACAACCGTGTCTCCTCCAATGATTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ELSLSRAIYGLE*GTTVSPPMILS Trigger: TGAAAGAATCATTGGAGGAGACACGGTTGTTCCTCACTCAAGACCGTATATGGCTCTACTTAAACTTAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS TCA 72 bp | CTTCATAATCTTCTTTATCCAATTGAGGTGTTTATCTaGGAGGAAAGTATAGACACCAGGCCATCGGCGATC | + |
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Preference number: 6 (lower is better) Translates to: LHNLLYPIEVFI*EESIDTRPSAI Trigger: GATCGCCGATGGCCTGGTGTCTATACTTTCCTCTCAGATAAACACCTCAATTGGATAAAGAAGATTATGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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| CDS CAA 72 bp | TCATCATTGCAGATTTTTCTGTCTATGACAGTGATGTaGACTTCTCTCAGAGTTTCAGAGGGAGCTGACTTA | + |
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Preference number: 6 (lower is better) Translates to: SSLQIFLSMTVM*TSLRVSEGADL Trigger: TAAGTCAGCTCCCTCTGAAACTCTGAGAGAAGTCAACATCACTGTCATAGACAGAAAAATCTGCAATGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023897.7 ENSMUST00000224282.2 |
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