Pregenerated sensors for GZF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027439Ensembl transcript IDs: ENSMUST00000028928.8, ENSMUST00000131292.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCCCTTTAAGGCCCTCTTAAAATTAATGCTTAAGGGTCACAGGTaGCACAGGGTCCACATACCCATCCATGGCCCTGCAACCATGTAT | + |
|
Preference number: 1 (lower is better) Translates to: SPFKALLKLMLKGHR*HRVHIPIHGPATMY Trigger: ATACATGGTTGCAGGGCCATGGATGGGTATGTGGACCCTGTGCCACCTGTGACCCTTAAGCATTAATTTTAAGAGGGCCTTAAAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR TCA 90 bp | ACAGAATGTTCAAGTGTGAAAGAGACGTGCAAGGTCATGGAAGTCTaGAGAAACCTGCAAGGCCAGTCTTGCCTACATTTTTGCACAGAC | + |
|
Preference number: 1 (lower is better) Translates to: TECSSVKETCKVMEV*RNLQGQSCLHFCTD Trigger: GTCTGTGCAAAAATGTAGGCAAGACTGGCCTTGCAGGTTTCTTCAGACTTCCATGACCTTGCACGTCTCTTTCACACTTGAACATTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR GCA 90 bp | CCATGGCCCTGCAACCATGTATCAGGGATAGCAAGTACCATAAAATaGATTTTTCATAGGAAATTTGTTGAACAATTACTAAATTCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: PWPCNHVSGIASTIK*IFHRKFVEQLLNSA Trigger: TGCTGAATTTAGTAATTGTTCAACAAATTTCCTATGAAAAATGCATTTTATGGTACTTGCTATCCCTGATACATGGTTGCAGGGCCATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTGCCCCTGGCATCACCTaGAATACAGCAATTACACAG | + |
|
Preference number: 2 (lower is better) Translates to: SHTSVERQLSAGFFGRTAAPGIT*NTAITQ Trigger: CTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGC...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTAAGTCTGAAGAAACCTaGAAGGCCAGTCTTGCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SHTSVERQLSAGFFGRTAKSEET*KASLAY Trigger: GTAGGCAAGACTGGCCTTGCAGGTTTCTTCAGACTT...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTAGCACTTTCCCAAGCTaGGTCAATGCTGTGTACTCT | + |
|
Preference number: 2 (lower is better) Translates to: SHTSVERQLSAGFFGRTASTFPS*VNAVYS Trigger: AGAGTACACAGCATTGACCCAGCTTGGGAAAGTGCT...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCACAGAATGTTCAAGTGTaGAAGAGACGTGCAAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSQNVQV*KRRARS Trigger: TGACCTTGCACGTCTCTTTCACACTTGAACATTCTG...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTCTAAAGGGACCAGAGTaGAGTAAACACACATGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SHTSVERQLSAGFFGRTALKGPE*SKHTWK Trigger: CTTCCATGTGTGTTTACTTCACTCTGGTCCCTTTAG...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCAGTCATTGAGAGCCACTaGTCTAGAGTCTTGCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSVIESH*SRVLHS Trigger: AGAATGCAAGACTCTAGAGCAGTGGCTCTCAATGAC...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCCTTTTCCTCAGCCCCTaGCATCACCTGGAATACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFLFLSP*HHLEYS Trigger: GCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAG...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCAAGGTCATGGAAGTCTaGAGAAACCTGCAAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFKVMEV*RNLQGQ Trigger: CTGGCCTTGCAGGTTTCTTCAGACTTCCATGACCTT...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR GCA 90 bp | GATTTGCCAGGCTCACTCATCATGCTGTTTGTGAAAATGTACCTAGCTAAATGCCTGCAAGGCCAGTCTTaGCTACATTTTTGCACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: DLPGSLIMLFVKMYLAKCLQGQS*LHFCTD Trigger: GTCTGTGCAAAAATGTAGGCAAGACTGGCCTTGCAG...GCATTTAGCTAGGTACATTTTCACAAACAGCATGATGAGTGAGCCTGGCAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTCTGATGAAATGTAGCTaGGATCATGCAGATCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SHTSVERQLSAGFFGRTALMKCS*DHADQN Trigger: ATTCTGATCTGCATGATCTCAGCTACATTTCATCAG...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCAAATCAAGCATTAGTGTaGTTGACATGTACGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSNQALV*LTCTAT Trigger: TGTAGCCGTACATGTCAATCACACTAATGCTTGATT...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCAGACGTGCAAGGTCATaGAAGTCTGAAGAAACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFRRARS*KSEETC Trigger: GCAGGTTTCTTCAGACTTCCATGACCTTGCACGTCT...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGTCAGCTAAAAATAAGTaGCCCCAGTTCTACTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: HTSVERQLSAGFFGRTALSAKNK*PQFYFN Trigger: GTTAAAGTAGAACTGGGGCCACTTATTTTTAGCTGA...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR CCA 72 bp | GGGTCACAGGTGGCACAGGGTCCACATACCCATCCATaGCCCTGCAACCATGTATCAGGGATAGCAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: GSQVAQGPHTHP*PCNHVSGIAST Trigger: GGTACTTGCTATCCCTGATACATGGTTGCAGGGCCATGGATGGGTATGTGGACCCTGTGCCACCTGTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR GCA 72 bp | CAGGTGGCACAGGGTCCACATACCCATCCATGGCCCTaGAACCATGTATCAGGGATAGCAAGTACCATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QVAQGPHTHPWP*NHVSGIASTIK Trigger: TTTTATGGTACTTGCTATCCCTGATACATGGTTGCAGGGCCATGGATGGGTATGTGGACCCTGTGCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR CCA 72 bp | AAGGCCCTCTTAAAATTAATGCTTAAGGGTCACAGGTaGCACAGGGTCCACATACCCATCCATGGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KALLKLMLKGHR*HRVHIPIHGPA Trigger: TGCAGGGCCATGGATGGGTATGTGGACCCTGTGCCACCTGTGACCCTTAAGCATTAATTTTAAGAGGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR CCA 72 bp | TGCACAGACAACTTTTCCTCAGCCCCTGGCATCACCTaGAATACAGCAATTACACAGACTGCTTGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: CTDNFSSAPGIT*NTAITQTAWHT Trigger: TGTGTGCCAAGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTGTCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR GCA 72 bp | AAGAGACGTGCAAGGTCATGGAAGTCTGAAGAAACCTaGAAGGCCAGTCTTGCCTACATTTTTGCACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KRRARSWKSEET*KASLAYIFAQT Trigger: TGTCTGTGCAAAAATGTAGGCAAGACTGGCCTTGCAGGTTTCTTCAGACTTCCATGACCTTGCACGTCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTCCTCTGAAAGGGTCATaGAGAGCCACTGCTCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCCGDSQPYSYFHCYFITPLKGS*RATALE Trigger: CTCTAGAGCAGTGGCTCTCAATGACCCTTTCAGAGG...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCAGTCTTGCCTACATTTTaGCACAGACAACTTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSVLPTF*HRQLFL Trigger: GAGGAAAAGTTGTCTGTGCAAAAATGTAGGCAAGAC...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTTGCCAGGCTCACTCATCATGCTGTTTGTGAAAATGTACCTAGCTAAATGCACAGCTCATCCCAAATaGGATGTTATGACAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLPGSLIMLFVKMYLAKCTAHPK*DVMTDS Trigger: GGAGTCTGTCATAACATCCAATTTGGGATGAGCTGT...GCATTTAGCTAGGTACATTTTCACAAACAGCATGATGAGTGAGCCTGGCAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR TCA 72 bp | CAGTGGTTTAGACGTCAAGAGAATCAAGCATTAGTGTaGTTGACATGTACGGCTACACCAGGGTTAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QWFRRQENQALV*LTCTATPGLNE Trigger: CTCATTTAACCCTGGTGTAGCCGTACATGTCAATCACACTAATGCTTGATTCTCTTGACGTCTAAACCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR TCA 72 bp | TGCCAGGTCATAACCGAATGTGAAATAATTCAGCCCTaGACTTTCAAGAGCAAGTGGGAAACATTACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CQVITECEIIQP*TFKSKWETLPA Trigger: TGCTGGTAATGTTTCCCACTTGCTCTTGAAAGTTCAGGGCTGAATTATTTCACATTCGGTTATGACCTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCAAGCCAAAGGAACATTaGAAACAACATCCCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFKPKEH*KQHPWF Trigger: GAACCAGGGATGTTGTTTCAAATGTTCCTTTGGCTT...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR CCA 72 bp | ATGAGAAAGCCAAAGGAACATTTGAAACAACATCCCTaGTTCCTTATGATCCGCTTGTTAAGGCATAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MRKPKEHLKQHP*FLMIRLLRHRS Trigger: ACTTCTATGCCTTAACAAGCGGATCATAAGGAACCAGGGATGTTGTTTCAAATGTTCCTTTGGCTTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTAAGGCCTTTGCCACACTaGCCACAGCGGTGCCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVRPLPH*PQRCRS Trigger: CGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCT...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTATCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVSLLCT*RWWLFR Trigger: CCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGA...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTACTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVLCTWR*WLFRLQ Trigger: CTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAG...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTATGCAGGCATGGAAACTaGCTGTGGGGTGAGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVCRHGN*LWGELT Trigger: GGTGAGCTCACCCCACAGGCAGTTTCCATGCCTGCA...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTACTGGCCTCCACCTCCTaGGACTCAGAGAAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVLASTS*DSEKFC Trigger: GCAGAATTTCTCTGAGTCTCAGGAGGTGGAGGCCAG...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTCCTGGGGGCCACTGCTaGCCTCCACCTCCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSAPGITWNTAITQTAPGGHC*PPPPET Trigger: AGTCTCAGGAGGTGGAGGCCAGCAGTGGCCCCCAGG...AGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCAGGAAGTGGCGCTCGCTaGTGTGCACGTGGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSGSGAR*CARGAG Trigger: ACCAGCGCCACGTGCACAGCAGCGAGCGCCACTTCC...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCGCCGCAGAGCAGTCTTaGAGCTCAGGCCTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLFLSPWHHLEYSNYTDCAAEQS*SSGLCH Trigger: GTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGC...GCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTGTCGCCTGTGTGTGTaGGCTCGTGCAGCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHTSVERQLSAGFFGRTACRLCV*ARAAAE Trigger: CTCTGCGGCTGCACGAGCGCACACACACAGGCGACA...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTAGCCCAGTCTCTCTATTaGGTAGTCGGAGGAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVAQSLY*VVGGIY Trigger: GTAGATTCCTCCGACTACCCAATAGAGAGACTGGGC...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTTGCACGTGGCGCTGGTaGCTCTTCAGGTTGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTCTWRW*LFRLQR Trigger: CCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCA...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCAGTGTGTGTGCGCTCGTaGAGCCGCAGAGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSVCVRS*SRRAVL Trigger: CAAGACTGCTCTGCGGCTGCACGAGCGCACACACAC...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTACAGAAGGTTGAGTGGTaGAGATTTGGATTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVQKVEW*RFGFQQ Trigger: TTGCTGGAATCCAAATCTTCACCACTCAACCTTCTG...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGGTGTGGATGCGATGGTaGCGCTGGAGGGCATTTACC | + |
|
Preference number: 4 (lower is better) Translates to: HTSVERQLSAGFFGRTALVWMRW*RWRAFT Trigger: GGTAAATGCCCTCCAGCGCCACCATCGCATCCACAC...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTCTGGGCTTTGGTCCTaGGGACACTTGTCATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLFLSPWHHLEYSNYTDCSGLWS*GHLSFS Trigger: AGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGA...GCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTATTCATCATTCTTGGGTaGGCCATCTACAATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVFIILG*AIYNDK Trigger: CTTGTCATTGTAGATGGCTCACCCAAGAATGATGAA...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTTGGCACAAGCTCATGCATCTCATaGAGAAGGTTGAGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPLASPGIQQLHRLLGTSSCIS*RRLSGE Trigger: TTCACCACTCAACCTTCTGCATGAGATGCATGAGCT...TGTGCCAAGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTGGTGGCTCTTCAGGTTaGAGCGGTTGGCAAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTSVERQLSAGFFGRTAGGSSG*SGWQRS Trigger: AGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACC...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCGCCAGCACTGCTTTATaGGCCATGAAGTCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLFLSPWHHLEYSNYTDCASTAL*AMKSSW Trigger: CCATGAAGACTTCATGGCCCATAAAGCAGTGCTGGC...GCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTTGGAGGGCATTTACCTaGGTGAACTGCTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NFSSAPGITWNTAITQTAWRAFT*VNCFPH Trigger: GTGTGGGAAGCAGTTCACCCAGGTAAATGCCCTCCA...AGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTTGGCACAATCTGCTTCTTTAGCTaGAAGCATGTTTCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPLASPGIQQLHRLLGTICFFS*KHVSDR Trigger: CCTGTCTGAAACATGCTTGCAGCTAAAGAAGCAGAT...TGTGCCAAGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGCTGGTGAGAGCCCATTaGCCAGTCTCTCTATTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTSVERQLSAGFFGRTALLVRAH*PVSLLG Trigger: ACCCAATAGAGAGACTGGGCAATGGGCTCTCACCAG...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGTCCCCCTCCACTTTCTaGAGGCTTTCCTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSVERQLSAGFFGRTALSPSTF*RLSSSS Trigger: AGAACTGGAGGAAAGCCTGCAGAAAGTGGAGGGGGA...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTGGCCGCTCTCCCGTGTaGACTTTAATATGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHTSVERQLSAGFFGRTAGRSPV*TLICWY Trigger: GTACCAGCATATTAAAGTCCACACGGGAGAGCGGCC...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTCTGCTTTATGGGCCATaGAGTCTTCATGGACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTLLYGP*SLHGHP Trigger: AGGGTGTCCATGAAGACTTCATGGCCCATAAAGCAG...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCATCAGCATGTGGTTCTaGGTGAATCTTGCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QLFLSPWHHLEYSNYTDCISMWF*VNLAPH Trigger: ATGTGGTGCAAGATTCACTCAGAACCACATGCTGAT...GCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTAGAAGGCGGAGCTCATaGATCTCATGCAGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTRRRSS*ISCRRL Trigger: CAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCT...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCACACTTGTCATTCTCTaGGGCTTCCTCAGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLFLSPWHHLEYSNYTDCTLVIL*GFLSTF Trigger: AAAAGTGCTGAGGAAGCCGCAGAGAATGACAAGTGT...GCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCATTTCACACGGGAAGTaGCGCTCGCTGCTGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFISHGK*RSLLCT Trigger: CGTGCACAGCAGCGAGCGCCACTTCCCGTGTGAAAT...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCATGCGATGGTGGCGCTaGAGGGCATTTACCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFMRWWR*RAFTWV Trigger: CACCCAGGTAAATGCCCTCCAGCGCCACCATCGCAT...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGCACATGTCTCACACATaGAAGGCCTTTCACCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTSVERQLSAGFFGRTALHMSHT*KAFHLC Trigger: ACACAGGTGAAAGGCCTTTCATGTGTGAGACATGTG...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTGTGAGCCATCTACAATaGCAAGGAAAGACTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTVSHLQ*QGKTST Trigger: CGTGGAAGTCTTTCCTTGTCATTGTAGATGGCTCAC...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTTGGCACACTTCCAGTAAGTTGTTaGAATGGCTATTTTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPLASPGIQQLHRLLGTLPVSC*NGYFHQ Trigger: TTGGTGAAAATAGCCATTTCAACAACTTACTGGAAG...TGTGCCAAGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTAGCCAGCCTCCCACTTaGTCTTCTGATTTTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTSQPPT*SSDFRE Trigger: TTCCCTAAAATCAGAAGAGCAAGTGGGAGGCTGGCT...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGTGCACCTGCAGCACATaGCGTTTCACATCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTSVERQLSAGFFGRTALCTCST*RFTSFL Trigger: CAAGAAAGATGTGAAACGGCATGTGCTGCAGGTGCA...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCCCACCCTCATGCACCTaGAGCACATGCCGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFPPSCT*STCRFT Trigger: TGTGAAACGGCATGTGCTGCAGGTGCATGAGGGTGG...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTTACCTGGGTGAACTaGTTCCCACACTGGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SHTSVERQLSAGFFGRTAFTWVN*FPHWSQ Trigger: TTGTGACCAGTGTGGGAAGCAGTTCACCCAGGTAAA...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTTTCCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCAAAAGTCCGTCCACATaGATTGCACATGTATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLFLSPWHHLEYSNYTDCKSPST*IAHVWL Trigger: AAGCCATACATGTGCAATGCATGTGGACGGACTTTT...GCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGGAAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTGTGGCCACACCATGGTaGTACTTGATATGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHTSVERQLSAGFFGRTAVATPW*YLICFR Trigger: CCTGAAACATATCAAGTACCACCATGGTGTGGCCAC...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCTCAGGTTGCAGCGGTTaGCAAAGGTCTGGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFSGCSG*QRSGHK Trigger: CTTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGA...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR CAA 72 bp | GGTCATGGAAGTCTGAAGAAACCTGCAAGGCCAGTCTaGCCTACATTTTTGCACAGACAACTTTTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHGSLKKPARPV*PTFLHRQLFLS Trigger: GCTGAGGAAAAGTTGTCTGTGCAAAAATGTAGGCAAGACTGGCCTTGCAGGTTTCTTCAGACTTCCATGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTCCTTGTCACAGACTGTaGACTGGAAGTTACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHTSVERQLSAGFFGRTAPCHRL*TGSYSS Trigger: AGAAGAGTAACTTCCAGTGCACAGTCTGTGACAAGG...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCAGTGTGGACTTTAATATaGTGGTACAGGGAATTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSVWTLI*WYRELR Trigger: GCGCAATTCCCTGTACCAGCATATTAAAGTCCACAC...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCCTGGTACACTTGCTTTaGAGCTGGGGGTCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFLVHLL*SWGSHS Trigger: TGAGTGTGACCCCCAGCTCCAAAGCAAGTGTACCAG...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTTCTCATGCAGAAGGTTaGGTGGTGAAGATTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTSHAEG*VVKIWI Trigger: AATCCAAATCTTCACCACTCAACCTTCTGCATGAGA...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTTGCATTCTTCTAGAGGTGAATTTGTAGCAGTTACTAGTTTGTGTCATCAAGGAGGGAAGGTGTaGAGGCATGGAAACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVLHSSRGEFVAVTSLCHQGGKV*RHGNCL Trigger: CAGGCAGTTTCCATGCCTGCACACCTTCCCTCCTTG...ATGACACAAACTAGTAACTGCTACAAATTCACCTCTAGAAGAATGCAAGACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGCATCTTTCTTGCGTTTaGACTTCTTGGCACACATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTSVERQLSAGFFGRTALHLSCV*TSWHTF Trigger: AAATGTGTGCCAAGAAGTTCAAACGCAAGAAAGATG...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTGCAGGCACATTGCCTTaGACTTCCAGTAAGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCCGDSQPYSYFHCYFITAGTLP*TSSKLL Trigger: CAACAACTTACTGGAAGTCCAAGGCAATGTGCCTGC...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCCTTCTACCCGCACTTTaGCAGTATAGACAAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFLLPAL*QYRQTP Trigger: TGGAGTTTGTCTATACTGCCAAAGTGCGGGTAGAAG...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTTGCATTCTTCTAGAGGTGAATTTGTAGCAGTTACTAGTTTGTGTCATTCCTCAGCACTTTTCTaGTGTTCTCGGAGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVLHSSRGEFVAVTSLCHSSALF*CSRSLL Trigger: AAGAAGGCTCCGAGAACAGCAGAAAAGTGCTGAGGA...ATGACACAAACTAGTAACTGCTACAAATTCACCTCTAGAAGAATGCAAGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTGGTTGTTCTGTCTTATaGCCTTCATCATTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCCGDSQPYSYFHCYFITGCSVL*PSSFLG Trigger: ACCCAAGAATGATGAAGGGCATAAGACAGAACAACC...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCTTGCATTCTTCTAGAGGTGAATTTGTAGCAGTTACTAGTTTGTGTCATGCATGTGGTTCTGAGTaGATCTTGCACCACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVLHSSRGEFVAVTSLCHACGSE*ILHHIH Trigger: ATGAATGTGGTGCAAGATTCACTCAGAACCACATGC...ATGACACAAACTAGTAACTGCTACAAATTCACCTCTAGAAGAATGCAAGACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR GCA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCGACTCAGAGAAATTCTaGAATTCCAAAAGGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFDSEKF*NSKRTD Trigger: GTCTGTCCTTTTGGAATTGCAGAATTTCTCTGAGTC...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR TCA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTGTGTGGATTCTGTTATaGTGCTTTAAGTACTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCCGDSQPYSYFHCYFITVWILL*CFKYSL Trigger: TAAGGAGTACTTAAAGCATCATAACAGAATCCACAC...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| 3UTR CAA 72 bp | ATTACTAAATTCAGCATGAGAAAGCCAAAGGAACATTaGAAACAACATCCCTGGTTCCTTATGATCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITKFSMRKPKEH*KQHPWFLMIRL Trigger: CAAGCGGATCATAAGGAACCAGGGATGTTGTTTCAAATGTTCCTTTGGCTTTCTCATGCTGAATTTAGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTATCGATCTGAAAGTTTaGGTGATGCATATTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCCGDSQPYSYFHCYFITIDLKV*VMHIHH Trigger: ATGATGAATATGCATCACCCAAACTTTCAGATCGAT...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | GTGTGCGCTCGTGCAGCCGCAGAGCAGTCTTGGAGCTCAGGCCTTTaGCACACTGGCCACAGCGGTGCCGCTCGCCACCACCCTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCARAAAEQSWSSGL*HTGHSGAARHHPHA Trigger: TGCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGCTGCACGAGCGCACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | TCGTGCAGCCGCAGAGCAGTCTTGGAGCTCAGGCCTTTGCCACACTaGCCACAGCGGTGCCGCTCGCCACCACCCTCATGCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSRRAVLELRPLPH*PQRCRSPPPSCTCS Trigger: GCTGCAGGTGCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGCTGCACGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | AGAGCAGTCTTGGAGCTCAGGCCTTTGCCACACTGGCCACAGCGGTaGCGCTCGCCACCACCCTCATGCACCTGCAGCACATGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAVLELRPLPHWPQR*RSPPPSCTCSTCRF Trigger: GAAACGGCATGTGCTGCAGGTGCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | CACATTTCACACGGGAAGTGGCGCTCGCTGCTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAGCGGTTGGCAAAGGTCTGGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HISHGKWRSLLCTWR*WLFRLQRLAKVWPQ Trigger: TTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCACTTCCCGTGTGAAATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | TTGGCACACATTTCACACGGGAAGTGGCGCTCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTGGCAAAGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAHISHGKWRSLLCT*RWWLFRLQRLAKVW Trigger: CCAGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCACTTCCCGTGTGAAATGTGTGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | ACGTGGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTGGCAAAGGTCTaGCCACAAGTGTCACATCGGTACACCACTTCGGTGGCCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: TWRWWLFRLQRLAKV*PQVSHRYTTSVATP Trigger: TGGTGTGGCCACCGAAGTGGTGTACCGATGTGACACTTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | CCTTTGCCACACTGGCCACAGCGGTGCCGCTCGCCACCACCCTCATaGACCTGCAGCACATGCCGTTTCACATCTTTCTTGCGTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPHWPQRCRSPPPS*TCSTCRFTSFLRLN Trigger: GTTCAAACGCAAGAAAGATGTGAAACGGCATGTGCTGCAGGTGCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | CCACACTGGCCACAGCGGTGCCGCTCGCCACCACCCTCATGCACCTaGAGCACATGCCGTTTCACATCTTTCTTGCGTTTGAACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHWPQRCRSPPPSCT*STCRFTSFLRLNFL Trigger: CAAGAAGTTCAAACGCAAGAAAGATGTGAAACGGCATGTGCTGCAGGTGCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | AAGGGCACTGATGGAAGTGGTAAGCAGAGCGTCCTGAGACACCACTaGTTTGCAAGCAGCGCCTGTAGAGCTGTTCTCCTGCACGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGTDGSGKQSVLRHH*FASSACRAVLLHGR Trigger: CCTGCCGTGCAGGAGAACAGCTCTACAGGCGCTGCTTGCAAAGCAGTGGTGTCTCAGGACGCTCTGCTTACCACTTCCATCAGTGCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTAAGCCGCAGAGCAGTCTaGGAGCTCAGGCCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVSRRAV*ELRPLP Trigger: TGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGCT...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | GTGAGCTCACCAAGGGCACTGATGGAAGTGGTAAGCAGAGCGTCCTaGGACACCACTGCTTTGCAAGCAGCGCCTGTAGAGCTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSPRALMEVVSRAS*DTTALQAAPVELFS Trigger: GGAGAACAGCTCTACAGGCGCTGCTTGCAAAGCAGTGGTGTCTCAGGACGCTCTGCTTACCACTTCCATCAGTGCCCTTGGTGAGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTATGGTGGCTCTTCAGGTaGCAGCGGTTGGCAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVWWLFR*QRLAKV Trigger: GACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCA...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | CCACAGCGGTGCCGCTCGCCACCACCCTCATGCACCTGCAGCACATaGCGTTTCACATCTTTCTTGCGTTTGAACTTCTTGGCACACATT | + |
|
Preference number: 5 (lower is better) Translates to: PQRCRSPPPSCTCST*RFTSFLRLNFLAHI Trigger: AATGTGTGCCAAGAAGTTCAAACGCAAGAAAGATGTGAAACGGCATGTGCTGCAGGTGCATGAGGGTGGTGGCGAGCGGCACCGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | CACTTGCTTTGGAGCTGGGGGTCACACTCACCTGGGGGCCACTGCTaGCCTCCACCTCCTGAGACTCAGAGAAATTCTGCAATTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLLWSWGSHSPGGHC*PPPPETQRNSAIPK Trigger: TTTTGGAATTGCAGAATTTCTCTGAGTCTCAGGAGGTGGAGGCCAGCAGTGGCCCCCAGGTGAGTGTGACCCCCAGCTCCAAAGCAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | GCAGCTGGCTCAGTCTCCATCCTCTCATTGTCTGGGCTTTGGTCCTaGGGACACTTGTCATTCTCTGCGGCTTCCTCAGCACTTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAGSVSILSLSGLWS*GHLSFSAASSALFC Trigger: GCAGAAAAGTGCTGAGGAAGCCGCAGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGACAATGAGAGGATGGAGACTGAGCCAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | TCACTCCATATTGGTCAAGGAGGGAAGGTGTGCAGGCATGGAAACTaGCTGTGGGGTGAGCTCACCAAGGGCACTGATGGAAGTGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLHIGQGGKVCRHGN*LWGELTKGTDGSGK Trigger: CTTACCACTTCCATCAGTGCCCTTGGTGAGCTCACCCCACAGGCAGTTTCCATGCCTGCACACCTTCCCTCCTTGACCAATATGGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | AGCCTCACTTTTGGCAGCTGGCTCAGTCTCCATCCTCTCATTGTCTaGGCTTTGGTCCTGAGGACACTTGTCATTCTCTGCGGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTFGSWLSLHPLIV*ALVLRTLVILCGFL Trigger: GAGGAAGCCGCAGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGACAATGAGAGGATGGAGACTGAGCCAGCTGCCAAAAGTGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | TTCCTCCAGTTCTACACTAGCAGGGCAAGCCTCACTTTTGGCAGCTaGCTCAGTCTCCATCCTCTCATTGTCTGGGCTTTGGTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLQFYTSRASLTFGS*LSLHPLIVWALVLR Trigger: CCTCAGGACCAAAGCCCAGACAATGAGAGGATGGAGACTGAGCCAGCTGCCAAAAGTGAGGCTTGCCCTGCTAGTGTAGAACTGGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTTGGCACATTCAGGTTGCAGCGGTaGGCAAAGGTCTGGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PQPLASPGIQQLHRLLGTFRLQR*AKVWPQ Trigger: TTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGAA...TGTGCCAAGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGCCCCTGGCATCACCTGGAATACAGCAATTACACAGACTGCTTGGCACACTCATTGTCTGGGCTTaGGTCCTGAGGACACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PQPLASPGIQQLHRLLGTLIVWA*VLRTLV Trigger: GACAAGTGTCCTCAGGACCAAAGCCCAGACAATGAG...TGTGCCAAGCAGTCTGTGTAATTGCTGTATTCCAGGTGATGCCAGGGGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTTTGGAGCTCAGGCCTTaGCCACACTGGCCACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTLELRP*PHWPQR Trigger: CCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAA...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | CCTCTCATTGTCTGGGCTTTGGTCCTGAGGACACTTGTCATTCTCTaGGGCTTCCTCAGCACTTTTCTGCTGTTCTCGGAGCCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLIVWALVLRTLVIL*GFLSTFLLFSEPSC Trigger: ACAAGAAGGCTCCGAGAACAGCAGAAAAGTGCTGAGGAAGCCGCAGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGACAATGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCAAGGGTTCTCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCACCTCCCCTGGTACACTaGCTTTGGAGCTGGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRVLSLPNAGTLLYSSSPPLVH*LWSWGS Trigger: TGACCCCCAGCTCCAAAGCAAGTGTACCAGGGGAGG...TGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGAGAACCCTTGAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTGGGCAAGCCTCACTTTaGGCAGCTGGCTCAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTGQASL*AAGSVS Trigger: GGAGACTGAGCCAGCTGCCAAAAGTGAGGCTTGCCC...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTATGCCCTTCATCATTCTaGGGTGAGCCATCTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVCPSSF*GEPSTM Trigger: CATTGTAGATGGCTCACCCAAGAATGATGAAGGGCA...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | TCATGGACACCCTGGTTCTCTATGCTAACAGTGACATCACACAAGTaGCCCAGAAGGCGGAGCTCATGCATCTCATGCAGAAGGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SWTPWFSMLTVTSHK*PRRRSSCISCRRLS Trigger: ACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGGCCACTTGTGTGATGTCACTGTTAGCATAGAGAACCAGGGTGTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CCA 90 bp | CCACAAGTGTCACATCGGTACACCACTTCGGTGGCCACACCATGGTaGTACTTGATATGTTTCAGGAAACTCTTCTCGTACAGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQVSHRYTTSVATPW*YLICFRKLFSYRKA Trigger: GGCCTTCCTGTACGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACCGATGTGACACTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | TGTCACATCGGTACACCACTTCGGTGGCCACACCATGGTGGTACTTaGTATGTTTCAGGAAACTCTTCTCGTACAGGAAGGCCTTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CHIGTPLRWPHHGGT*YVSGNSSRTGRPCH Trigger: GTGACAAGGCCTTCCTGTACGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACCGATGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | CGCTCTCCCGTGTGGACTTTAATATGCTGGTACAGGGAATTGCGCTaGGCAAAGGTCCGCAAGCACACTTCACATTTAAAGGGCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSPVWTLICWYRELR*AKVRKHTSHLKGFD Trigger: ATCGAAGCCCTTTAAATGTGAAGTGTGCTTGCGGACCTTTGCTCAGCGCAATTCCCTGTACCAGCATATTAAAGTCCACACGGGAGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | GTGACATCACACAAGTGGCCCAGAAGGCGGAGCTCATGCATCTCATaGAGAAGGTTGAGTGGTGAAGATTTGGATTCCAGCAAAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTSHKWPRRRSSCIS*RRLSGEDLDSSKTV Trigger: CACAGTTTTGCTGGAATCCAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGGCCACTTGTGTGATGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS GCA 90 bp | ATGCTAACAGTGACATCACACAAGTGGCCCAGAAGGCGGAGCTCATaGATCTCATGCAGAAGGTTGAGTGGTGAAGATTTGGATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MLTVTSHKWPRRRSS*ISCRRLSGEDLDSS Trigger: GCTGGAATCCAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGGCCACTTGTGTGATGTCACTGTTAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CCA 90 bp | CCACTTCGAGCATCTGCTGCACACGGTCTTCTTCTACCCGCACTTTaGCAGTATAGACAAACTCCAGAAACGAAGCAAAGTCAACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLRASAAHGLLLPAL*QYRQTPETKQSQQP Trigger: AGGCTGTTGACTTTGCTTCGTTTCTGGAGTTTGTCTATACTGCCAAAGTGCGGGTAGAAGAAGACCGTGTGCAGCAGATGCTCGAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CCA 90 bp | TGGCCACAAGTGTCACATCGGTACACCACTTCGGTGGCCACACCATaGTGGTACTTGATATGTTTCAGGAAACTCTTCTCGTACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WPQVSHRYTTSVATP*WYLICFRKLFSYRK Trigger: CTTCCTGTACGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACCGATGTGACACTTGTGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGACCAGGAGACCACGAACAGCACTTTCCCAAGCTGGGTCAATGCTGTGTATTGAGTGGTGAAGATTaGGATTCCAGCAAAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARPGDHEQHFPKLGQCCVLSGED*DSSKTV Trigger: CACAGTTTTGCTGGAATCCAAATCTTCACCACTCAA...TACACAGCATTGACCCAGCTTGGGAAAGTGCTGTTCGTGGTCTCCTGGTCTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGTCGTACAGGAAGGCCTaGTCACAGACTGTGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HTSVERQLSAGFFGRTALSYRKA*SQTVHW Trigger: CCAGTGCACAGTCTGTGACAAGGCCTTCCTGTACGA...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTGCACGGCAGGCACATaGCCTTGGACTTCCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHTSVERQLSAGFFGRTACTAGT*PWTSSK Trigger: CTTACTGGAAGTCCAAGGCAATGTGCCTGCCGTGCA...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | CTTCTTGTCCAGTTTCTCCTTACACTTCTTGGATGGTGTTTCTGGTaGGAGCCCATTGCCCAGTCTCTCTATTGGGTAGTCGGAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LLVQFLLTLLGWCFW*EPIAQSLYWVVGGI Trigger: GATTCCTCCGACTACCCAATAGAGAGACTGGGCAATGGGCTCTCACCAGAAACACCATCCAAGAAGTGTAAGGAGAAACTGGACAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | CACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTTTGGATGGCTGTGAGAACTaGGCATCACACTTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: HTSVERQLSAGFFGRTALDGCEN*ASHLVQ Trigger: CTGTACCAAGTGTGATGCCAAGTTCTCACAGCCATC...CAAAGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | ACAAGGAAAGACTTCCACGGCGTATTCTTATCATGTATTGAGGTATaGCTCCGGAGAGTAGACTTGTCAGTAAAAGTCCGTCCACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRKDFHGVFLSCIEV*LRRVDLSVKVRPHA Trigger: TGCATGTGGACGGACTTTTACTGACAAGTCTACTCTCCGGAGGCATACCTCAATACATGATAAGAATACGCCGTGGAAGTCTTTCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | TACAATGACAAGGAAAGACTTCCACGGCGTATTCTTATCATGTATTaGGGTATGCCTCCGGAGAGTAGACTTGTCAGTAAAAGTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YNDKERLPRRILIMY*GMPPESRLVSKSPS Trigger: GGACGGACTTTTACTGACAAGTCTACTCTCCGGAGGCATACCTCAATACATGATAAGAATACGCCGTGGAAGTCTTTCCTTGTCATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | TTCATCATCGGGTTGTTCTGTCTTATGCCCTTCATCATTCTTGGGTaGGCCATCTACAATGACAAGGAAAGACTTCCACGGCGTATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FIIGLFCLMPFIILG*AIYNDKERLPRRIL Trigger: AAGAATACGCCGTGGAAGTCTTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATAAGACAGAACAACCCGATGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 90 bp | GTTCTGTCTTATGCCCTTCATCATTCTTGGGTGAGCCATCTACAATaGCAAGGAAAGACTTCCACGGCGTATTCTTATCATGTATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSYALHHSWVSHLQ*QGKTSTAYSYHVLR Trigger: CCTCAATACATGATAAGAATACGCCGTGGAAGTCTTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATAAGACAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCTTGCGTTTGAACTTCTaGGCACACATTTCACACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFLRLNF*AHISHG Trigger: CCCGTGTGAAATGTGTGCCAAGAAGTTCAAACGCAA...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 90 bp | GAAAGTTTGGGTGATGCATATTCATCATCGGGTTGTTCTGTCTTATaGCCTTCATCATTCTTGGGTGAGCCATCTACAATGACAAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ESLGDAYSSSGCSVL*PSSFLGEPSTMTRK Trigger: TTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATAAGACAGAACAACCCGATGATGAATATGCATCACCCAAACTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 90 bp | TGCACGGCAGGCACATTGCCTTGGACTTCCAGTAAGTTGTTGAAATaGCTATTTTCACCAAAAGATAGTAATCGATCTGAAAGTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CTAGTLPWTSSKLLK*LFSPKDSNRSESLG Trigger: ACCCAAACTTTCAGATCGATTACTATCTTTTGGTGAAAATAGCCATTTCAACAACTTACTGGAAGTCCAAGGCAATGTGCCTGCCGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTGCCACATCTTTCTTCTaGTCCAGTTTCTCCTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SCCGDSQPYSYFHCYFITATSFF*SSFSLH Trigger: GTGTAAGGAGAAACTGGACAAGAAGAAAGATGTGGC...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTCCTAATGCTGGGACCCTTTTATACAGTTCCTCATGTTGTGGTGACTCTTGTATATTTCTTTTaGGGGATTTCCACAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: SAFLMLGPFYTVPHVVVTLVYFF*GISTNT Trigger: GGTGTTTGTGGAAATCCCCAAAAAGAAATATACAAG...AGTCACCACAACATGAGGAACTGTATAAAAGGGTCCCAGCATTAGGAAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | GATTTGCCAGGCTCACTCATCATGCTGTTTGTGAAAATGTACCTAGCTAAATGCATATTCATCATCGGGTaGTTCTGTCTTATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLPGSLIMLFVKMYLAKCIFIIG*FCLMPF Trigger: GAAGGGCATAAGACAGAACAACCCGATGATGAATAT...GCATTTAGCTAGGTACATTTTCACAAACAGCATGATGAGTGAGCCTGGCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACACTTCTGTAGAGAGACAACTGTCTGCTGGATTCTTTGGTAGGACAGCTACTTCCAGTAAGTTGTaGAAATGGCTATTTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SHTSVERQLSAGFFGRTATSSKL*KWLFSP Trigger: TGGTGAAAATAGCCATTTCAACAACTTACTGGAAGT...AGCTGTCCTACCAAAGAATCCAGCAGACAGTTGTCTCTCTACAGAAGTGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCATGTTGTGGTGACTCCCAGCCATACAGTTATTTCCATTGCTACTTCATAACTATCTCATGCAGAAGGTaGAGTGGTGAAGATTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCCGDSQPYSYFHCYFITISCRR*SGEDLD Trigger: ATCCAAATCTTCACCACTCAACCTTCTGCATGAGAT...AGTTATGAAGTAGCAATGGAAATAACTGTATGGCTGGGAGTCACCACAACATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCTTAGAAGCAAAACTCTaGCCACATGTCTCACACATG | + |
|
Preference number: 5 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFLEAKL*PHVSHM Trigger: CATGTGTGAGACATGTGGCAAGAGTTTTGCTTCTAA...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS-3UTR CAA 90 bp | TCTATCTTCACCCTGAACATTAGGAGTCATTCCCTTAGAAACCAGAGTGTTTTCACATCTTTCTTGCGTTaGAACTTCTTGGCACACATT | + |
|
Preference number: 5 (lower is better) Translates to: SIFTLNIRSHSLRNQSVFTSFLR*NFLAHI Trigger: AATGTGTGCCAAGAAGTTCAAACGCAAGAAAGATGT...GAAAACACTCTGGTTTCTAAGGGAATGACTCCTAATGTTCAGGGTGAAGATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | CGTGCAGCCGCAGAGCAGTCTTGGAGCTCAGGCCTTTaGCACACTGGCCACAGCGGTGCCGCTCGCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAAAEQSWSSGL*HTGHSGAARHH Trigger: GTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGCTGCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | TGTGTGCGCTCGTGCAGCCGCAGAGCAGTCTTGGAGCTCAGGCCTTaGCCACACTGGCCACAGCGGTGCCGCTCGCCACCACCCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: CVRSCSRRAVLELRP*PHWPQRCRSPPPSC Trigger: GCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGCTGCACGAGCGCACACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | CGCAGAGCAGTCTTGGAGCTCAGGCCTTTGCCACACTaGCCACAGCGGTGCCGCTCGCCACCACCCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: RRAVLELRPLPH*PQRCRSPPPSC Trigger: GCATGAGGGTGGTGGCGAGCGGCACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | CACGGGAAGTGGCGCTCGCTGCTGTGCACGTGGCGCTaGTGGCTCTTCAGGTTGCAGCGGTTGGCAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HGKWRSLLCTWR*WLFRLQRLAKV Trigger: GACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCACTTCCCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | CTGTGTGTGTGCGCTCGTGCAGCCGCAGAGCAGTCTTaGAGCTCAGGCCTTTGCCACACTGGCCACAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LCVCARAAAEQS*SSGLCHTGHSG Trigger: ACCGCTGTGGCCAGTGTGGCAAAGGCCTGAGCTCCAAGACTGCTCTGCGGCTGCACGAGCGCACACACACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | ATTTCACACGGGAAGTGGCGCTCGCTGCTGTGCACGTaGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISHGKWRSLLCT*RWWLFRLQRLA Trigger: TGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCACAGCAGCGAGCGCCACTTCCCGTGTGAAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | TGGAGCTGGGGGTCACACTCACCTGGGGGCCACTGCTaGCCTCCACCTCCTGAGACTCAGAGAAATTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSWGSHSPGGHC*PPPPETQRNSA Trigger: TGCAGAATTTCTCTGAGTCTCAGGAGGTGGAGGCCAGCAGTGGCCCCCAGGTGAGTGTGACCCCCAGCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | GCACGTGGCGCTGGTGGCTCTTCAGGTTGCAGCGGTTaGCAAAGGTCTGGCCACAAGTGTCACATCGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: ARGAGGSSGCSG*QRSGHKCHIGT Trigger: TGTACCGATGTGACACTTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | TGCACGTGGCGCTGGTGGCTCTTCAGGTTGCAGCGGTaGGCAAAGGTCTGGCCACAAGTGTCACATCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CTWRWWLFRLQR*AKVWPQVSHRY Trigger: GTACCGATGTGACACTTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCAGCGCCACGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | CAAGGAGGGAAGGTGTGCAGGCATGGAAACTGCCTGTaGGGTGAGCTCACCAAGGGCACTGATGGAAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGGKVCRHGNCL*GELTKGTDGSG Trigger: ACCACTTCCATCAGTGCCCTTGGTGAGCTCACCCCACAGGCAGTTTCCATGCCTGCACACCTTCCCTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | GGATGCGATGGTGGCGCTGGAGGGCATTTACCTGGGTaGACTGCTTCCCACACTGGTCACAACAATAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCDGGAGGHLPG*TASHTGHNNKA Trigger: GGCCTTATTGTTGTGACCAGTGTGGGAAGCAGTTCACCCAGGTAAATGCCCTCCAGCGCCACCATCGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | ATTGGTCAAGGAGGGAAGGTGTGCAGGCATGGAAACTaGCTGTGGGGTGAGCTCACCAAGGGCACTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: IGQGGKVCRHGN*LWGELTKGTDG Trigger: TCCATCAGTGCCCTTGGTGAGCTCACCCCACAGGCAGTTTCCATGCCTGCACACCTTCCCTCCTTGACCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | TGGTGGCTCTTCAGGTTGCAGCGGTTGGCAAAGGTCTaGCCACAAGTGTCACATCGGTACACCACTTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WWLFRLQRLAKV*PQVSHRYTTSV Trigger: CACCGAAGTGGTGTACCGATGTGACACTTGTGGCCAGACCTTTGCCAACCGCTGCAACCTGAAGAGCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | TGCAGGCTTTCCTCCAGTTCTACACTAGCAGGGCAAGCCTCACTTTaGGCAGCTGGCTCAGTCTCCATCCTCTCATTGTCTGGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRLSSSSTLAGQASL*AAGSVSILSLSGLW Trigger: CCAAAGCCCAGACAATGAGAGGATGGAGACTGAGCCAGCTGCCAAAAGTGAGGCTTGCCCTGCTAGTGTAGAACTGGAGGAAAGCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | GTCTGGGCTTTGGTCCTGAGGACACTTGTCATTCTCTaGGGCTTCCTCAGCACTTTTCTGCTGTTCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VWALVLRTLVIL*GFLSTFLLFSE Trigger: CTCCGAGAACAGCAGAAAAGTGCTGAGGAAGCCGCAGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | TGCCGCTCGCCACCACCCTCATGCACCTGCAGCACATaGCGTTTCACATCTTTCTTGCGTTTGAACTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CRSPPPSCTCST*RFTSFLRLNFL Trigger: CAAGAAGTTCAAACGCAAGAAAGATGTGAAACGGCATGTGCTGCAGGTGCATGAGGGTGGTGGCGAGCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | ACTTTTGGCAGCTGGCTCAGTCTCCATCCTCTCATTGTCTGGGCTTaGGTCCTGAGGACACTTGTCATTCTCTGCGGCTTCCTCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: TFGSWLSLHPLIVWA*VLRTLVILCGFLST Trigger: AGTGCTGAGGAAGCCGCAGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGACAATGAGAGGATGGAGACTGAGCCAGCTGCCAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | ACCTGCAGCACATGCCGTTTCACATCTTTCTTGCGTTTGAACTTCTaGGCACACATTTCACACGGGAAGTGGCGCTCGCTGCTGTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: TCSTCRFTSFLRLNF*AHISHGKWRSLLCT Trigger: CGTGCACAGCAGCGAGCGCCACTTCCCGTGTGAAATGTGTGCCAAGAAGTTCAAACGCAAGAAAGATGTGAAACGGCATGTGCTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | TCAGTCTCCATCCTCTCATTGTCTGGGCTTTGGTCCTaGGGACACTTGTCATTCTCTGCGGCTTCCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVSILSLSGLWS*GHLSFSAASSA Trigger: TGCTGAGGAAGCCGCAGAGAATGACAAGTGTCCTCAGGACCAAAGCCCAGACAATGAGAGGATGGAGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | CACAAGTGGCCCAGAAGGCGGAGCTCATGCATCTCATaGAGAAGGTTGAGTGGTGAAGATTTGGATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HKWPRRRSSCIS*RRLSGEDLDSS Trigger: GCTGGAATCCAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGGCCACTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CCA 72 bp | TTCTACACTAGCAGGGCAAGCCTCACTTTTGGCAGCTaGCTCAGTCTCCATCCTCTCATTGTCTGGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FYTSRASLTFGS*LSLHPLIVWAL Trigger: CAAAGCCCAGACAATGAGAGGATGGAGACTGAGCCAGCTGCCAAAAGTGAGGCTTGCCCTGCTAGTGTAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | CACAAGTGGCCCAGAAGGCGGAGCTCATGCATCTCATGCAGAAGGTaGAGTGGTGAAGATTTGGATTCCAGCAAAACTGTGCCACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HKWPRRRSSCISCRR*SGEDLDSSKTVPLS Trigger: GGAAAGTGGCACAGTTTTGCTGGAATCCAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGGCCACTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CAA 90 bp | TCTTGGATGGTGTTTCTGGTGAGAGCCCATTGCCCAGTCTCTCTATaGGGTAGTCGGAGGAATCTACAAGGCCATTGGAGTGAGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SWMVFLVRAHCPVSL*GSRRNLQGHWSEHP Trigger: AGGATGCTCACTCCAATGGCCTTGTAGATTCCTCCGACTACCCAATAGAGAGACTGGGCAATGGGCTCTCACCAGAAACACCATCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | GTGACATCACACAAGTGGCCCAGAAGGCGGAGCTCATaGATCTCATGCAGAAGGTTGAGTGGTGAAGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: VTSHKWPRRRSS*ISCRRLSGEDL Trigger: CAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGGCCACTTGTGTGATGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CAA 72 bp | GTGTTTCTGGTGAGAGCCCATTGCCCAGTCTCTCTATaGGGTAGTCGGAGGAATCTACAAGGCCATTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VFLVRAHCPVSL*GSRRNLQGHWS Trigger: ACTCCAATGGCCTTGTAGATTCCTCCGACTACCCAATAGAGAGACTGGGCAATGGGCTCTCACCAGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | GTGTCACATCGGTACACCACTTCGGTGGCCACACCATGGTGGTACTaGATATGTTTCAGGAAACTCTTCTCGTACAGGAAGGCCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSHRYTTSVATPWWY*ICFRKLFSYRKALS Trigger: TGACAAGGCCTTCCTGTACGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACCGATGTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | GGTACACCACTTCGGTGGCCACACCATGGTGGTACTTaGTATGTTTCAGGAAACTCTTCTCGTACAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTPLRWPHHGGT*YVSGNSSRTGR Trigger: CCTTCCTGTACGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | AAACACTTTAGCTTCTCAGCCACTTCGAGCATCTGCTaGACACGGTCTTCTTCTACCCGCACTTTGGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: KHFSFSATSSIC*TRSSSTRTLAV Trigger: TACTGCCAAAGTGCGGGTAGAAGAAGACCGTGTGCAGCAGATGCTCGAAGTGGCTGAGAAGCTAAAGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CCA 72 bp | GTGTCACATCGGTACACCACTTCGGTGGCCACACCATaGTGGTACTTGATATGTTTCAGGAAACTCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSHRYTTSVATP*WYLICFRKLFS Trigger: CGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACCGATGTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | CCCAGAAGGCGGAGCTCATGCATCTCATGCAGAAGGTaGAGTGGTGAAGATTTGGATTCCAGCAAAACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRRRSSCISCRR*SGEDLDSSKTV Trigger: CACAGTTTTGCTGGAATCCAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGCCTTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CAA 72 bp | CGGTACACCACTTCGGTGGCCACACCATGGTGGTACTaGATATGTTTCAGGAAACTCTTCTCGTACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RYTTSVATPWWY*ICFRKLFSYRK Trigger: CTTCCTGTACGAGAAGAGTTTCCTGAAACATATCAAGTACCACCATGGTGTGGCCACCGAAGTGGTGTACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | ACATGCCGTTTCACATCTTTCTTGCGTTTGAACTTCTaGGCACACATTTCACACGGGAAGTGGCGCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TCRFTSFLRLNF*AHISHGKWRSL Trigger: CAGCGAGCGCCACTTCCCGTGTGAAATGTGTGCCAAGAAGTTCAAACGCAAGAAAGATGTGAAACGGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | GCGGAGCTCATGCATCTCATGCAGAAGGTTGAGTGGTaGAGATTTGGATTCCAGCAAAACTGTGCCACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AELMHLMQKVEW*RFGFQQNCATF Trigger: GAAAGTGGCACAGTTTTGCTGGAATCCAAATCTTCACCACTCAACCTTCTGCATGAGATGCATGAGCTCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS TCA 72 bp | CAGTTTCTCCTTACACTTCTTGGATGGTGTTTCTGGTaGGAGCCCATTGCCCAGTCTCTCTATTGGGTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QFLLTLLGWCFW*EPIAQSLYWVV Trigger: GACTACCCAATAGAGAGACTGGGCAATGGGCTCTCACCAGAAACACCATCCAAGAAGTGTAAGGAGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | GCATCTGCTGCACACGGTCTTCTTCTACCCGCACTTTaGCAGTATAGACAAACTCCAGAAACGAAGCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASAAHGLLLPAL*QYRQTPETKQS Trigger: ACTTTGCTTCGTTTCTGGAGTTTGTCTATACTGCCAAAGTGCGGGTAGAAGAAGACCGTGTGCAGCAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CAA 72 bp | TCATGCACCTGCAGCACATGCCGTTTCACATCTTTCTaGCGTTTGAACTTCTTGGCACACATTTCACACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCTCSTCRFTSF*RLNFLAHISHG Trigger: CCCGTGTGAAATGTGTGCCAAGAAGTTCAAACGCAAGAAAGATGTGAAACGGCATGTGCTGCAGGTGCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | GGCTTAGCCACATCTTTCTTCTTGTCCAGTTTCTCCTTACACTTCTaGGATGGTGTTTCTGGTGAGAGCCCATTGCCCAGTCTCTCTATT | + |
|
Preference number: 6 (lower is better) Translates to: GLATSFFLSSFSLHF*DGVSGESPLPSLSI Trigger: AATAGAGAGACTGGGCAATGGGCTCTCACCAGAAACACCATCCAAGAAGTGTAAGGAGAAACTGGACAAGAAGAAAGATGTGGCTAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | GGGTTGTTCTGTCTTATGCCCTTCATCATTCTTGGGTaGGCCATCTACAATGACAAGGAAAGACTTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GLFCLMPFIILG*AIYNDKERLPR Trigger: CCGTGGAAGTCTTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATAAGACAGAACAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CCA 72 bp | ACTGCTTTATGGGCCATGAAGTCTTCATGGACACCCTaGTTCTCTATGCTAACAGTGACATCACACAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TALWAMKSSWTP*FSMLTVTSHKW Trigger: CCACTTGTGTGATGTCACTGTTAGCATAGAGAACCAGGGTGTCCATGAAGACTTCATGGCCCATAAAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028928.8 ENSMUST00000131292.2 |
||
| CDS CAA 90 bp | GCATATTCATCATCGGGTTGTTCTGTCTTATGCCCTTCATCATTCTaGGGTGAGCCATCTACAATGACAAGGAAAGACTTCCACGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AYSSSGCSVLCPSSF*GEPSTMTRKDFHGV Trigger: TACGCCGTGGAAGTCTTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATAAGACAGAACAACCCGATGATGAATATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | GTGTGGACTTTAATATGCTGGTACAGGGAATTGCGCTaGGCAAAGGTCCGCAAGCACACTTCACATTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VWTLICWYRELR*AKVRKHTSHLK Trigger: CTTTAAATGTGAAGTGTGCTTGCGGACCTTTGCTCAGCGCAATTCCCTGTACCAGCATATTAAAGTCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | GACTTCCACGGCGTATTCTTATCATGTATTGAGGTATaGCTCCGGAGAGTAGACTTGTCAGTAAAAGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: DFHGVFLSCIEV*LRRVDLSVKVR Trigger: ACGGACTTTTACTGACAAGTCTACTCTCCGGAGGCATACCTCAATACATGATAAGAATACGCCGTGGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | ACATCTTTCTTCTTGTCCAGTTTCTCCTTACACTTCTaGGATGGTGTTTCTGGTGAGAGCCCATTGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSFFLSSFSLHF*DGVSGESPLPS Trigger: ACTGGGCAATGGGCTCTCACCAGAAACACCATCCAAGAAGTGTAAGGAGAAACTGGACAAGAAGAAAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS GCA 72 bp | CACTTGTCATTCTCTGCGGCTTCCTCAGCACTTTTCTaGTGTTCTCGGAGCCTTCTTGTATATTTCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HLSFSAASSALF*CSRSLLVYFFL Trigger: CAAAAAGAAATATACAAGAAGGCTCCGAGAACAGCAGAAAAGTGCTGAGGAAGCCGCAGAGAATGACAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | ATATGTTTCAGGAAACTCTTCTCGTACAGGAAGGCCTaGTCACAGACTGTGCACTGGAAGTTACTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ICFRKLFSYRKA*SQTVHWKLLFF Trigger: GAAGAAGAGTAACTTCCAGTGCACAGTCTGTGACAAGGCCTTCCTGTACGAGAAGAGTTTCCTGAAACATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | TCATCGGGTTGTTCTGTCTTATGCCCTTCATCATTCTaGGGTGAGCCATCTACAATGACAAGGAAAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCSVLCPSSF*GEPSTMTRKDF Trigger: GAAGTCTTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATAAGACAGAACAACCCGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | CTGTTCTCCTGCACGGCAGGCACATTGCCTTGGACTTCCAGTAAGTaGTTGAAATGGCTATTTTCACCAAAAGATAGTAATCGATCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LFSCTAGTLPWTSSK*LKWLFSPKDSNRSE Trigger: TTCAGATCGATTACTATCTTTTGGTGAAAATAGCCATTTCAACAACTTACTGGAAGTCCAAGGCAATGTGCCTGCCGTGCAGGAGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | AAGGAAAGACTTCCACGGCGTATTCTTATCATGTATTaGGGTATGCCTCCGGAGAGTAGACTTGTCAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KERLPRRILIMY*GMPPESRLVSK Trigger: TTTACTGACAAGTCTACTCTCCGGAGGCATACCTCAATACATGATAAGAATACGCCGTGGAAGTCTTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | TATGCCCTTCATCATTCTTGGGTGAGCCATCTACAATaGCAAGGAAAGACTTCCACGGCGTATTCTTATCAT | + |
|
Preference number: 6 (lower is better) Translates to: YALHHSWVSHLQ*QGKTSTAYSYH Trigger: ATGATAAGAATACGCCGTGGAAGTCTTTCCTTGTCATTGTAGATGGCTCACCCAAGAATGATGAAGGGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 90 bp | TTCTCCTGCACGGCAGGCACATTGCCTTGGACTTCCAGTAAGTTGTaGAAATGGCTATTTTCACCAAAAGATAGTAATCGATCTGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSCTAGTLPWTSSKL*KWLFSPKDSNRSES Trigger: ACTTTCAGATCGATTACTATCTTTTGGTGAAAATAGCCATTTCAACAACTTACTGGAAGTCCAAGGCAATGTGCCTGCCGTGCAGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS TCA 72 bp | GGCACCTTTTATGATAAATCAGCATGTGGTTCTGAGTaGATCTTGCACCACATTCATCACAGACAAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTFYDKSACGSE*ILHHIHHRQKV Trigger: GACCTTTTGTCTGTGATGAATGTGGTGCAAGATTCACTCAGAACCACATGCTGATTTATCATAAAAGGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | TGCACGGCAGGCACATTGCCTTGGACTTCCAGTAAGTaGTTGAAATGGCTATTTTCACCAAAAGATAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: CTAGTLPWTSSK*LKWLFSPKDSN Trigger: ATTACTATCTTTTGGTGAAAATAGCCATTTCAACAACTTACTGGAAGTCCAAGGCAATGTGCCTGCCGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||
| CDS CAA 72 bp | CTATTTTCACCAAAAGATAGTAATCGATCTGAAAGTTaGGGTGATGCATATTCATCATCGGGTTGTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LFSPKDSNRSES*GDAYSSSGCSV Trigger: GACAGAACAACCCGATGATGAATATGCATCACCCAAACTTTCAGATCGATTACTATCTTTTGGTGAAAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028928.8 |
||