Pregenerated sensors for GYS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030244Ensembl transcript IDs: ENSMUST00000032371.8, ENSMUST00000126939.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTaGATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTC | + |
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Preference number: 1 (lower is better) Translates to: TNSRFQMSGCKYLLV*IRVWTWGSSFSCGF Trigger: GAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| 3UTR CCA 90 bp | AGTAAGGTGACTCACATTGGTGGCTACAAGTTCCTATCAATGATCTaGATACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGT | + |
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Preference number: 1 (lower is better) Translates to: SKVTHIGGYKFLSMI*IQILDFRCQDVNIC Trigger: ACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGTATCCAGATCATTGATAGGAACTTGTAGCCACCAATGTGAGTCACCTTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| 3UTR CAA 90 bp | CTGGATACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTaGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LDTNSRFQMSGCKYL*VCIRVWTWGSSFSC Trigger: ACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGTATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| 3UTR GCA 72 bp | AGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTaGATCAGGGTGTGGACTTGGGGCAGCTCATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: RFQMSGCKYLLV*IRVWTWGSSFS Trigger: AGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| 3UTR-3UTR CAA 90 bp | AGATTGAAATTTCCAATTAGACAACAAAAGTACCGTTACAGTAAGGTGACTCACGGGCAGCTCATTTTCTaGTGGATTCTGAATCATTTC | + |
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Preference number: 3 (lower is better) Translates to: RLKFPIRQQKYRYSKVTHGQLIF*WILNHF Trigger: GAAATGATTCAGAATCCACAAGAAAATGAGCTGCCC...GTGAGTCACCTTACTGTAACGGTACTTTTGTTGTCTAATTGGAAATTTCAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| 3UTR CCA 72 bp | ACTCACATTGGTGGCTACAAGTTCCTATCAATGATCTaGATACAAATTCTAGATTTCAGATGTCAGGATGTA | + |
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Preference number: 3 (lower is better) Translates to: THIGGYKFLSMI*IQILDFRCQDV Trigger: TACATCCTGACATCTGAAATCTAGAATTTGTATCCAGATCATTGATAGGAACTTGTAGCCACCAATGTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS-3UTR TCA 90 bp | GTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGTCCGCATCACTGCACTaGGGACTGGAGGCCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VGLHQGVDLGQLIFLWILSASLH*GLEAWD Trigger: ATCCCAGGCCTCCAGTCCTCAGTGCAGTGATGCGGA...CAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS-3UTR GCA 90 bp | CAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATCGTCTTCCGCATCACTaGACTGAGGACTGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QDVNICWSASGCGLGAAHRLPHH*TEDWRP Trigger: AGGCCTCCAGTCCTCAGTGCAGTGATGCGGAAGACG...ATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS-3UTR TCA 90 bp | GTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGTTTCTGACACTGTGGTaGACACGTGCGCACAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VGLHQGVDLGQLIFLWILFLTLW*TRAHSA Trigger: TGCACTGTGCGCACGTGTTCACCACAGTGTCAGAAA...CAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | AGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCACGTCTTCCGCATCACTaGACTGAGGACTGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RCQDVNICWSASGCGLGARLPHH*TEDWRP Trigger: AGGCCTCCAGTCCTCAGTGCAGTGATGCGGAAGACG...TGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS-3UTR GCA 90 bp | CAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTCCTCTTCAGCATGTaGTCTGCCTCGATGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QDVNICWSASGCGLGAAHFLFSM*SASMAV Trigger: CACAGCCATCGAGGCAGAGCACATGCTGAAGAGGAA...ATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGGTTTTGGCCTTGGTCTaGATCACAGTACAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGLHQGVDLGQLIFLWILVLALV*ITVQMP Trigger: GGGCATCTGTACTGTGATCCAGACCAAGGCCAAAAC...CAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | CAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATCATGGAATTGGGCAATaGCGTGTTTACCGTCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: QDVNICWSASGCGLGAAHHGIGQ*RVYRLR Trigger: ACGCAGACGGTAAACACGTCATTGCCCAATTCCATG...ATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | GGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGAGCTCATCCGTGCGGTTCCTCTaGATGATCCTTTGCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GLGAAHFLVDSESFRLSSSVRFL*MILCRR Trigger: ACGCCGGCAAAGGATCATTCAGAGGAACCGCACGGA...TGAGCTCAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | GCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGGATGCCCGCTCCATaGAGTAGCGGTGGTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGCGLGAAHFLVDSESFRMPAP*SSGGIS Trigger: AGATATACCACCGCTACTGCATGGAGCGGGCATCCG...AAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGTCAGTGTCAGGTGTCTaGCATGCTGGTAATATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGLHQGVDLGQLIFLWILSVSGV*HAGNIC Trigger: GCAGATATTACCAGCATGCCAGACACCTGACACTGA...CAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | TGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTAGGGACTCCCTTCTATaGGCCATCTTCCAAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: CWSASGCGLGAAHFLVDSRDSLL*AIFQNA Trigger: TGCATTTTGGAAGATGGCTCATAGAAGGGAGTCCCT...AGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | GGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGGTCCAGGTTCCATGCTaGGGAGCTGATGTCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GCGLGAAHFLVDSESFRLVQVPC*GADVKE Trigger: CTCTTTGACATCAGCTCCTCAGCATGGAACCTGGAC...CAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | AGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTCAGCTGTTTCCGCACTaGCTGGCCCTTCAGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RFQMSGCKYLLVCIRVWTQLFPH*LALQGF Trigger: GAAACCCTGAAGGGCCAGGCAGTGCGGAAACAGCTG...AGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | TGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTCTGTCGTTTTGGCCTTaGTCTGGATCACAGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: CWSASGCGLGAAHFLVDSLSFWP*SGSQYR Trigger: TCTGTACTGTGATCCAGACCAAGGCCAAAACGACAG...AGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | AGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCACGAAATCCTGTATCCTaGCCTTGTACATGGCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RCQDVNICWSASGCGLGARNPVS*PCTWRG Trigger: TCCACGCCATGTACAAGGCCAGGATACAGGATTTCG...TGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | GATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTTGCGGTTCCTCTGAATaGTCCTTTGCCGGCGTGACT | + |
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Preference number: 4 (lower is better) Translates to: DFRCQDVNICWSASGCGLCGSSE*SFAGVT Trigger: AGTCACGCCGGCAAAGGATCATTCAGAGGAACCGCA...AAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | AATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGCCAGTCCAGGAGATCTaGGAGCCTCTCCGTGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: NSRFQMSGCKYLLVCIRVPVQEI*EPLRAV Trigger: AACCGCACGGAGAGGCTCTCAGATCTCCTGGACTGG...CACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | CTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGAGGTCATGATGAGGGATaGCAACGCCACAAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDFRCQDVNICWSASGCGGHDEG*QRHKLP Trigger: GGGAAGCTTGTGGCGTTGGCATCCCTCATCATGACC...TCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGGAAGTCAATATTTGCTaGACAGAGATAACGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VGLHQGVDLGQLIFLWILEVNIC*TEITPK Trigger: CTTGGGCGTTATCTCTGTGCAGCAAATATTGACTTC...CAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGTGTCTGGAAAAGCCCTaGTCAGTGTCAGGTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FQMSGCKYLLVCIRVWTWCLEKP*SVSGVW Trigger: CCAGACACCTGACACTGAGCAGGGCTTTTCCAGACA...CCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | AGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCATCATCGATCATATTGTaGGTGGTCACAGGAGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RCQDVNICWSASGCGLGASSIIL*VVTGGK Trigger: TTTGCCTCCTGTGACCACTCACAATATGATCGATGA...TGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | AGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCACACCTTGACTCTGTCTaGACGATTGTTGAAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RCQDVNICWSASGCGLGAHLDSV*TIVEKS Trigger: GGACTTTTCAACAATCGTGCAGACAGAGTCAAGGTG...TGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGTGCCCCCAACTTTGTTaGTCACCTCCCAAGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: GCGLGAAHFLVDSESFRLCPQLC*SPPKKL Trigger: AAGTTTCTTGGGAGGTGACCAACAAAGTTGGGGGCA...CAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCCAAGCAGTGTGGCATaGGTTGTAAATACTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: DVNICWSASGCGLGAAHFPSSVA*VVNTVA Trigger: TGCCACAGTATTTACAACCCATGCCACACTGCTTGG...AAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | CAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTCCTGGCCTTGTACATaGCGTGGAGATTTTGAAATT | + |
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Preference number: 4 (lower is better) Translates to: QDVNICWSASGCGLGAAHSWPCT*RGDFEI Trigger: AATTTCAAAATCTCCACGCCATGTACAAGGCCAGGA...ATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTTGGGCAATAGAGGGCTaGTGGAGGACAGGAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: DFRCQDVNICWSASGCGLWAIEG*WRTGIL Trigger: CAGAATTCCTGTCCTCCACCAGCCCTCTATTGCCCA...AAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | AGATTGAAATTTCCAATTAGACAACAAAAGTACCGTTACAGTAAGGTGACTCACTCCGCATCACTGCACTaGGGACTGGAGGCCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RLKFPIRQQKYRYSKVTHSASLH*GLEAWD Trigger: ATCCCAGGCCTCCAGTCCTCAGTGCAGTGATGCGGA...GTGAGTCACCTTACTGTAACGGTACTTTTGTTGTCTAATTGGAAATTTCAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS-3UTR CCA 90 bp | GGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGAGCTCAGATGTGGGCTCTAGGTaGAATTTGTCTGGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLGAAHFLVDSESFRLSSDVGSR*NLSGKA Trigger: GGCTTTTCCAGACAAATTCCACCTAGAGCCCACATC...TGAGCTCAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGAGCTCACGATCATATTGTGAGTaGTCACAGGAGGCAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: GLGAAHFLVDSESFRLSSRSYCE*SQEAKT Trigger: AGTCTTTGCCTCCTGTGACCACTCACAATATGATCG...TGAGCTCAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | GATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGTTCATAGTACGATaGAAACACCCCAAGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: DFRCQDVNICWSASGCGLGFIVR*KHPKVT Trigger: TGTCACCTTGGGGTGTTTCCATCGTACTATGAACCC...AAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | CAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGGTTGCAAGAATCGTCTaGAGAGCGGAAGCGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QILDFRCQDVNICWSASGVARIV*RAEASV Trigger: GACAGACGCTTCCGCTCTCCAGACGATTCTTGCAAC...CCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| 3UTR CAA 72 bp | AATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTaGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: NSRFQMSGCKYL*VCIRVWTWGSS Trigger: TGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS-3UTR GCA 90 bp | GATACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGCCCAGTCCCAGCCTaGCATTCATGGAATTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DTNSRFQMSGCKYLLVCISPVPA*HSWNWA Trigger: TGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCT...GATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGTAGAAGTCAATATTTaGTGCACAGAGATAACGCCC | + |
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Preference number: 4 (lower is better) Translates to: FQMSGCKYLLVCIRVWTWVEVNI*CTEITP Trigger: GGGCGTTATCTCTGTGCAGCAAATATTGACTTCTAC...CCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | ACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGCAATAGAGGGCTGGTaGAGGACAGGAATTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TNSRFQMSGCKYLLVCIRAIEGW*RTGILG Trigger: ACCCAGAATTCCTGTCCTCCACCAGCCCTCTATTGC...CCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | GATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTATGGCGTGGAGATTTTaGAATTCATGCACTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DFRCQDVNICWSASGCGLMAWRF*NSCTAE Trigger: TTCTGCAGTGCATGAATTTCAAAATCTCCACGCCAT...AAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | CAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGCCATTCATGGAATTaGGCAATGACGTGTTTACCG | + |
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Preference number: 4 (lower is better) Translates to: QILDFRCQDVNICWSASGCHSWN*AMTCLP Trigger: CGGTAAACACGTCATTGCCCAATTCCATGAATGGCA...CCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CCA 90 bp | AGATTGAAATTTCCAATTAGACAACAAAAGTACCGTTACAGTAAGGTGACTCACCCAGCCTGCCATTCATaGAATTGGGCAATGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: RLKFPIRQQKYRYSKVTHPACHS*NWAMTC Trigger: ACACGTCATTGCCCAATTCCATGAATGGCAGGCTGG...GTGAGTCACCTTACTGTAACGGTACTTTTGTTGTCTAATTGGAAATTTCAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | AGATTGAAATTTCCAATTAGACAACAAAAGTACCGTTACAGTAAGGTGACTCACTCAGGGTTTCCACGTTaGAATTGTTTGTCTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RLKFPIRQQKYRYSKVTHSGFPR*NCLSWQ Trigger: CTGCCAAGACAAACAATTTCAACGTGGAAACCCTGA...GTGAGTCACCTTACTGTAACGGTACTTTTGTTGTCTAATTGGAAATTTCAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | GATCTGGATACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCGGTGTAAAATCACCTTaGCTCTGTCTGCACGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLDTNSRFQMSGCKYLLVGVKSP*LCLHDC Trigger: ACAATCGTGCAGACAGAGTCAAGGTGATTTTACACC...GACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGTATCCAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR TCA 90 bp | GATCTGGATACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCAGACTGTCTCTGAGTTaGAAAAATGGCCCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLDTNSRFQMSGCKYLLVRLSLS*KNGPFH Trigger: ATGAAAAGGGCCATTTTTTCAACTCAGAGACAGTCT...GACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGTATCCAGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | TCTCATCCTCATCTTCTTCGTCTTCCGCATCACTGCACTGAGGACTaGAGGCCTGGGATCCTGACGGAGAAGGTGGTACTGAGGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHPHLLRLPHHCTED*RPGILTEKVVLRRA Trigger: GGCCCTCCTCAGTACCACCTTCTCCGTCAGGATCCCAGGCCTCCAGTCCTCAGTGCAGTGATGCGGAAGACGAAGAAGATGAGGATGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS TCA 90 bp | GGCATGCTGGTAATATCTGCCCAGGTATCTCCAGTCCAGGAGATCTaGGAGCCTCTCCGTGCGGTTCCTCTGAATGATCCTTTGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GMLVISAQVSPVQEI*EPLRAVPLNDPLPA Trigger: CGCCGGCAAAGGATCATTCAGAGGAACCGCACGGAGAGGCTCTCAGATCTCCTGGACTGGAGATACCTGGGCAGATATTACCAGCATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 90 bp | ATGGGGAGTTTCCTGGCACGAGAAAGGATCAGCCCAGTCCCAGCCTaGCATTCATGGAATTGGGCAATGACGTGTTTACCGTCTGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGSFLARERISPVPA*HSWNWAMTCLPSAW Trigger: CCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTTCTCGTGCCAGGAAACTCCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | TTCCTGGCACGAGAAAGGATCAGCCCAGTCCCAGCCTGCCATTCATaGAATTGGGCAATGACGTGTTTACCGTCTGCGTGGTCTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLARERISPVPACHS*NWAMTCLPSAWSVT Trigger: GGTGACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTTCTCGTGCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 90 bp | TCATACCTCTCATCCTCATCTTCTTCGTCTTCCGCATCACTGCACTaGGGACTGGAGGCCTGGGATCCTGACGGAGAAGGTGGTACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYLSSSSSSSSASLH*GLEAWDPDGEGGTE Trigger: CTCAGTACCACCTTCTCCGTCAGGATCCCAGGCCTCCAGTCCTCAGTGCAGTGATGCGGAAGACGAAGAAGATGAGGATGAGAGGTATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | GCACGAGAAAGGATCAGCCCAGTCCCAGCCTGCCATTCATGGAATTaGGCAATGACGTGTTTACCGTCTGCGTGGTCTGTCACCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ARERISPVPACHSWN*AMTCLPSAWSVTSF Trigger: AAAGGAGGTGACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTTCTCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 90 bp | ATCGTCTGGAGAGCGGAAGCGTCTGTCCACGATGTAAATACCGTATaGAGTAGGGTCAGCCACATGCTCCTGCACGAAACACCCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: IVWRAEASVHDVNTV*SRVSHMLLHETPKT Trigger: GGTTTTGGGTGTTTCGTGCAGGAGCATGTGGCTGACCCTACTGCATACGGTATTTACATCGTGGACAGACGCTTCCGCTCTCCAGACGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 90 bp | AAAGGATCAGCCCAGTCCCAGCCTGCCATTCATGGAATTGGGCAATaGCGTGTTTACCGTCTGCGTGGTCTGTCACCTCCTTTAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: KGSAQSQPAIHGIGQ*RVYRLRGLSPPLRT Trigger: GGTTCTTAAAGGAGGTGACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | GGATACTTAAAGCCATCCGTCGTTGGTGGTGATGTGGGCTCTAGGTaGAATTTGTCTGGAAAAGCCCTGCTCAGTGTCAGGTGTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYLKPSVVGGDVGSR*NLSGKALLSVRCLA Trigger: TGCCAGACACCTGACACTGAGCAGGGCTTTTCCAGACAAATTCCACCTAGAGCCCACATCACCACCAACGACGGATGGCTTTAAGTATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 90 bp | GGCGTGACTGTTTACAAAACCCGTAGAGGAACTGAGTCAGCTGGTTaGAAGAATCGTCTGGAGAGCGGAAGCGTCTGTCCACGATGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVTVYKTRRGTESAG*KNRLESGSVCPRCK Trigger: TTTACATCGTGGACAGACGCTTCCGCTCTCCAGACGATTCTTGCAACCAGCTGACTCAGTTCCTCTACGGGTTTTGTAAACAGTCACGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | CTAGGTGGAATTTGTCTGGAAAAGCCCTGCTCAGTGTCAGGTGTCTaGCATGCTGGTAATATCTGCCCAGGTATCTCCAGTCCAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGGICLEKPCSVSGV*HAGNICPGISSPGD Trigger: ATCTCCTGGACTGGAGATACCTGGGCAGATATTACCAGCATGCCAGACACCTGACACTGAGCAGGGCTTTTCCAGACAAATTCCACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | ACAAAACCCGTAGAGGAACTGAGTCAGCTGGTTGCAAGAATCGTCTaGAGAGCGGAAGCGTCTGTCCACGATGTAAATACCGTATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TKPVEELSQLVARIV*RAEASVHDVNTVCS Trigger: ACTGCATACGGTATTTACATCGTGGACAGACGCTTCCGCTCTCCAGACGATTCTTGCAACCAGCTGACTCAGTTCCTCTACGGGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | GCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTATGCCCCCAACTTTGTaGGTCACCTCCCAAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ASGCGLGAAHFLVDSESFMPPTL*VTSQET Trigger: AGTTTCTTGGGAGGTGACCAACAAAGTTGGGGGCAT...AAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 90 bp | AATGCACCTGGCAGCCATGTTTATTCATCGCATCCACAGCTTTTCTaGCAGCATCGTTGGTGGGCTCACATTGTTCTACTTGAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NAPGSHVYSSHPQLF*QHRWWAHIVLLESS Trigger: TGAAGACTCAAGTAGAACAATGTGAGCCCACCAACGATGCTGTCAGAAAAGCTGTGGATGCGATGAATAAACATGGCTGCCAGGTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | TCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGGGCTCTAGGTGGAATTaGTCTGGAAAAGCCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRFQMSGCKYLLVCIRVWGSRWN*SGKALL Trigger: GAGCAGGGCTTTTCCAGACAAATTCCACCTAGAGCC...CCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 90 bp | AGTCCAGATGACCATAGAAATGACCTCGAACGAAATCCTGTATCCTaGCCTTGTACATGGCGTGGAGATTTTGAAATTCATGCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPDDHRNDLERNPVS*PCTWRGDFEIHALQ Trigger: CTGCAGTGCATGAATTTCAAAATCTCCACGCCATGTACAAGGCCAGGATACAGGATTTCGTTCGAGGTCATTTCTATGGTCATCTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | GGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGGTTGGTGGGCTCACATaGTTCTACTTGAGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCGLGAAHFLVDSESFRLVGGLT*FYLSLH Trigger: ATGAAGACTCAAGTAGAACAATGTGAGCCCACCAAC...CAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTCTCACATTGTTCTACTaGAGTCTTCATATTATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWSASGCGLGAAHFLVDSLTLFY*SLHIML Trigger: GAGCATAATATGAAGACTCAAGTAGAACAATGTGAG...AGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | GATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTCATTTTTGTAGAAGTCAATATTaGCTGCACAGAGATAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVNICWSASGCGLGAAHFCRSQY*LHRDNA Trigger: GGCGTTATCTCTGTGCAGCAAATATTGACTTCTACA...AAAATGAGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | GGGTGTGGACTTGGGGCAGCTCATTTTCTTGTGGATTCTGAATCATTTCGTTTGTGTCTGCTCCTTTGTTaGAGAATTCATATCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCGLGAAHFLVDSESFRLCLLLC*RIHISQ Trigger: CTGGGAGATATGAATTCTCAAACAAAGGAGCAGACA...CAAACGAAATGATTCAGAATCCACAAGAAAATGAGCTGCCCCAAGTCCACACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | TGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAGCTTTGAAATTGTTTGTCTaGGCAGGCATGATGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CQDVNICWSASGCGLGAALKLFV*AGMMKN Trigger: GTTTTTCATCATGCCTGCCAAGACAAACAATTTCAA...AGCTGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | AGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGTGGACTTGGGGCAAAGATGTCTGCTCCTTaGTTTGAGAATTCATATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCQDVNICWSASGCGLGAKMSAP*FENSYL Trigger: GAGATATGAATTCTCAAACAAAGGAGCAGACATCTT...TGCCCCAAGTCCACACCCTGATGCAGACCAACAGATATTTACATCCTGACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | AGATTGAAATTTCCAATTAGACAACAAAAGTACCGTTACAGTAAGGTGACTCACCTGCCATTCATGGAATaGGGCAATGACGTGTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: RLKFPIRQQKYRYSKVTHLPFME*GNDVFT Trigger: GGTAAACACGTCATTGCCCAATTCCATGAATGGCAG...GTGAGTCACCTTACTGTAACGGTACTTTTGTTGTCTAATTGGAAATTTCAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | GATACAAATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCGGGTGTAAAATCACCTaGACTCTGTCTGCACGATTG | + |
|
Preference number: 5 (lower is better) Translates to: DTNSRFQMSGCKYLLVCIGCKIT*TLSARL Trigger: CAATCGTGCAGACAGAGTCAAGGTGATTTTACACCC...GATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATTTGTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS-3UTR CAA 90 bp | AATTCTAGATTTCAGATGTCAGGATGTAAATATCTGTTGGTCTGCATCAGGGTGGCTTTTTCTTCCCCTTaGGAAAGTGGTTCAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSRFQMSGCKYLLVCIRVAFSSP*ESGSEK Trigger: TTTCTCTGAACCACTTTCCAAAGGGGAAGAAAAAGC...CACCCTGATGCAGACCAACAGATATTTACATCCTGACATCTGAAATCTAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 72 bp | GCCCAGTCCCAGCCTGCCATTCATGGAATTGGGCAATaGCGTGTTTACCGTCTGCGTGGTCTGTCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AQSQPAIHGIGQ*RVYRLRGLSPP Trigger: AGGAGGTGACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 90 bp | GGCACGAGAAAGGATCAGCCCAGTCCCAGCCTGCCATTCATGGAATaGGGCAATGACGTGTTTACCGTCTGCGTGGTCTGTCACCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GTRKDQPSPSLPFME*GNDVFTVCVVCHLL Trigger: AAGGAGGTGACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTTCTCGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 72 bp | TCATCCTCATCTTCTTCGTCTTCCGCATCACTGCACTaGGGACTGGAGGCCTGGGATCCTGACGGAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSASLH*GLEAWDPDGEG Trigger: ACCTTCTCCGTCAGGATCCCAGGCCTCCAGTCCTCAGTGCAGTGATGCGGAAGACGAAGAAGATGAGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032371.8 ENSMUST00000126939.2 |
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| CDS CCA 72 bp | AGGATCAGCCCAGTCCCAGCCTGCCATTCATGGAATTaGGCAATGACGTGTTTACCGTCTGCGTGGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RISPVPACHSWN*AMTCLPSAWSV Trigger: GACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | CGAGAAAGGATCAGCCCAGTCCCAGCCTGCCATTCATaGAATTGGGCAATGACGTGTTTACCGTCTGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RERISPVPACHS*NWAMTCLPSAW Trigger: CCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTTCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 72 bp | CACCCTTCCATCTGTCCAGGTTCCATGCTGAGGAGCTaGTGTCAAAGAGCACCACGTAGGGACTCCCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HPSICPGSMLRS*CQRAPRRDSLL Trigger: TAGAAGGGAGTCCCTACGTGGTGCTCTTTGACATCAGCTCCTCAGCATGGAACCTGGACAGATGGAAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 72 bp | CCAGAAGTCACCCTTCCATCTGTCCAGGTTCCATGCTaGGGAGCTGATGTCAAAGAGCACCACGTAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PEVTLPSVQVPC*GADVKEHHVGT Trigger: AGTCCCTACGTGGTGCTCTTTGACATCAGCTCCTCAGCATGGAACCTGGACAGATGGAAGGGTGACTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 72 bp | TTCCTGGCACGAGAAAGGATCAGCCCAGTCCCAGCCTaGCATTCATGGAATTGGGCAATGACGTGTTTACCG | + |
|
Preference number: 6 (lower is better) Translates to: FLARERISPVPA*HSWNWAMTCLP Trigger: CGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTTTCTCGTGCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | AAGCCATCCGTCGTTGGTGGTGATGTGGGCTCTAGGTaGAATTTGTCTGGAAAAGCCCTGCTCAGTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KPSVVGGDVGSR*NLSGKALLSVR Trigger: CCTGACACTGAGCAGGGCTTTTCCAGACAAATTCCACCTAGAGCCCACATCACCACCAACGACGGATGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 72 bp | AAGGATCAGCCCAGTCCCAGCCTGCCATTCATGGAATaGGGCAATGACGTGTTTACCGTCTGCGTGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KDQPSPSLPFME*GNDVFTVCVVC Trigger: ACAGACCACGCAGACGGTAAACACGTCATTGCCCAATTCCATGAATGGCAGGCTGGGACTGGGCTGATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 72 bp | TCCGTCGTTGGTGGTGATGTGGGCTCTAGGTGGAATTaGTCTGGAAAAGCCCTGCTCAGTGTCAGGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVVGGDVGSRWN*SGKALLSVRCL Trigger: CAGACACCTGACACTGAGCAGGGCTTTTCCAGACAAATTCCACCTAGAGCCCACATCACCACCAACGACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 90 bp | TTAAAGCCATCCGTCGTTGGTGGTGATGTGGGCTCTAGGTGGAATTaGTCTGGAAAAGCCCTGCTCAGTGTCAGGTGTCTGGCATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKPSVVGGDVGSRWN*SGKALLSVRCLACW Trigger: CCAGCATGCCAGACACCTGACACTGAGCAGGGCTTTTCCAGACAAATTCCACCTAGAGCCCACATCACCACCAACGACGGATGGCTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 72 bp | CTCCGTGCGGTTCCTCTGAATGATCCTTTGCCGGCGTaGCTGTTTACAAAACCCGTAGAGGAACTGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRAVPLNDPLPA*LFTKPVEELSQ Trigger: CTGACTCAGTTCCTCTACGGGTTTTGTAAACAGTCACGCCGGCAAAGGATCATTCAGAGGAACCGCACGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 72 bp | AGAGCGGAAGCGTCTGTCCACGATGTAAATACCGTATaGAGTAGGGTCAGCCACATGCTCCTGCACGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RAEASVHDVNTV*SRVSHMLLHET Trigger: TGTTTCGTGCAGGAGCATGTGGCTGACCCTACTGCATACGGTATTTACATCGTGGACAGACGCTTCCGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 72 bp | GTTTACAAAACCCGTAGAGGAACTGAGTCAGCTGGTTaGAAGAATCGTCTGGAGAGCGGAAGCGTCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VYKTRRGTESAG*KNRLESGSVCP Trigger: TGGACAGACGCTTCCGCTCTCCAGACGATTCTTGCAACCAGCTGACTCAGTTCCTCTACGGGTTTTGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
||
| CDS CCA 72 bp | GTAGAGGAACTGAGTCAGCTGGTTGCAAGAATCGTCTaGAGAGCGGAAGCGTCTGTCCACGATGTAAATACC | + |
|
Preference number: 6 (lower is better) Translates to: VEELSQLVARIV*RAEASVHDVNT Trigger: GGTATTTACATCGTGGACAGACGCTTCCGCTCTCCAGACGATTCTTGCAACCAGCTGACTCAGTTCCTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 72 bp | CTGTCGTTTTGGCCTTGGTCTGGATCACAGTACAGATaGCCCCAACTTTGTTGGTCACCTCCCAAGAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: LSFWPWSGSQYR*PQLCWSPPKKL Trigger: AAGTTTCTTGGGAGGTGACCAACAAAGTTGGGGGCATCTGTACTGTGATCCAGACCAAGGCCAAAACGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | ATTTGTCTGGAAAAGCCCTGCTCAGTGTCAGGTGTCTaGCATGCTGGTAATATCTGCCCAGGTATCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ICLEKPCSVSGV*HAGNICPGISS Trigger: ACTGGAGATACCTGGGCAGATATTACCAGCATGCCAGACACCTGACACTGAGCAGGGCTTTTCCAGACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
||
| CDS TCA 72 bp | TCCCCTTTGGAAAGTGGTTCAGAGAAAACGGTGACTTaGTATTTAGCCGATCCCTCTCAGCCTCCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPLESGSEKTVT*YLADPSQPPLP Trigger: AGGAAGAGGAGGCTGAGAGGGATCGGCTAAATATCAAGTCACCGTTTTCTCTGAACCACTTTCCAAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
||
| CDS CAA 72 bp | GCCTTGGTCTGGATCACAGTACAGATGCCCCCAACTTaGTTGGTCACCTCCCAAGAAACTTCAAAAAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALVWITVQMPPT*LVTSQETSKSS Trigger: ACTGCTTTTTGAAGTTTCTTGGGAGGTGACCAACAAAGTTGGGGGCATCTGTACTGTGATCCAGACCAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
||
| CDS CAA 72 bp | TTCCCCTTTGGAAAGTGGTTCAGAGAAAACGGTGACTaGATATTTAGCCGATCCCTCTCAGCCTCCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPFGKWFRENGD*IFSRSLSASSS Trigger: GGAAGAGGAGGCTGAGAGGGATCGGCTAAATATCAAGTCACCGTTTTCTCTGAACCACTTTCCAAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS GCA 72 bp | GTCGAACTTGTCAAGCTGGTTGTAGAAGTCAATATTTaGTGCACAGAGATAACGCCCAAGCAGTGTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: VELVKLVVEVNI*CTEITPKQCGM Trigger: CATGCCACACTGCTTGGGCGTTATCTCTGTGCAGCAAATATTGACTTCTACAACCAGCTTGACAAGTTCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | GGACTCCCTTCTATGAGCCATCTTCCAAAATGCACCTaGCAGCCATGTTTATTCATCGCATCCACAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GLPSMSHLPKCT*QPCLFIASTAF Trigger: AAAAGCTGTGGATGCGATGAATAAACATGGCTGCCAGGTGCATTTTGGAAGATGGCTCATAGAAGGGAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | GGATGGGATCCGTGGAATCATCGATCATATTGTGAGTaGTCACAGGAGGCAAAGACTGTCTCTGAGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: GWDPWNHRSYCE*SQEAKTVSELK Trigger: TTTCAACTCAGAGACAGTCTTTGCCTCCTGTGACCACTCACAATATGATCGATGATTCCACGGATCCCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | GGACAAACTCTTCATAATCCATGGGCAATAGAGGGCTaGTGGAGGACAGGAATTCTGGGTGTAAAATCACCT | + |
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Preference number: 6 (lower is better) Translates to: GQTLHNPWAIEG*WRTGILGVKSP Trigger: AGGTGATTTTACACCCAGAATTCCTGTCCTCCACCAGCCCTCTATTGCCCATGGATTATGAAGAGTTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | TGGTCTGGATCACAGTACAGATGCCCCCAACTTTGTTaGTCACCTCCCAAGAAACTTCAAAAAGCAGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: WSGSQYRCPQLC*SPPKKLQKAVS Trigger: ACTTACTGCTTTTTGAAGTTTCTTGGGAGGTGACCAACAAAGTTGGGGGCATCTGTACTGTGATCCAGACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CCA 72 bp | GACCTCGAACGAAATCCTGTATCCTGGCCTTGTACATaGCGTGGAGATTTTGAAATTCATGCACTGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DLERNPVSWPCT*RGDFEIHALQK Trigger: TTTCTGCAGTGCATGAATTTCAAAATCTCCACGCCATGTACAAGGCCAGGATACAGGATTTCGTTCGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 72 bp | GGGTGTAAAATCACCTTGACTCTGTCTGCACGATTGTaGAAAAGTCCGATTCGTCTAATGGTGCTGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: GCKITLTLSARL*KSPIRLMVLRM Trigger: CATCCTCAGCACCATTAGACGAATCGGACTTTTCAACAATCGTGCAGACAGAGTCAAGGTGATTTTACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 72 bp | TCTGGGTGTAAAATCACCTTGACTCTGTCTGCACGATaGTTGAAAAGTCCGATTCGTCTAATGGTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGCKITLTLSAR*LKSPIRLMVLR Trigger: CCTCAGCACCATTAGACGAATCGGACTTTTCAACAATCGTGCAGACAGAGTCAAGGTGATTTTACACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 90 bp | CATCGCATCCACAGCTTTTCTGACAGCATCGTTGGTGGGCTCACATaGTTCTACTTGAGTCTTCATATTATGCTCAAAGTACGGACCTAT | + |
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Preference number: 6 (lower is better) Translates to: HRIHSFSDSIVGGLT*FYLSLHIMLKVRTY Trigger: ATAGGTCCGTACTTTGAGCATAATATGAAGACTCAAGTAGAACAATGTGAGCCCACCAACGATGCTGTCAGAAAAGCTGTGGATGCGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS TCA 72 bp | CTGACAGCATCGTTGGTGGGCTCACATTGTTCTACTTaGGTCTTCATATTATGCTCAAAGTACGGACCTATC | + |
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Preference number: 6 (lower is better) Translates to: LTASLVGSHCST*VFILCSKYGPI Trigger: GATAGGTCCGTACTTTGAGCATAATATGAAGACTCAAGTAGAACAATGTGAGCCCACCAACGATGCTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 90 bp | CACAGCTTTTCTGACAGCATCGTTGGTGGGCTCACATTGTTCTACTaGAGTCTTCATATTATGCTCAAAGTACGGACCTATCAGGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: HSFSDSIVGGLTLFY*SLHIMLKVRTYQEV Trigger: TACTTCCTGATAGGTCCGTACTTTGAGCATAATATGAAGACTCAAGTAGAACAATGTGAGCCCACCAACGATGCTGTCAGAAAAGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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| CDS CAA 72 bp | TCTGACAGCATCGTTGGTGGGCTCACATTGTTCTACTaGAGTCTTCATATTATGCTCAAAGTACGGACCTAT | + |
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Preference number: 6 (lower is better) Translates to: SDSIVGGLTLFY*SLHIMLKVRTY Trigger: ATAGGTCCGTACTTTGAGCATAATATGAAGACTCAAGTAGAACAATGTGAGCCCACCAACGATGCTGTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032371.8 |
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