Pregenerated sensors for GYG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019528Ensembl transcript IDs: ENSMUST00000118015.9, ENSMUST00000178328.8, ENSMUST00000184552.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTTCTACATTGCAGGTCTTGTGAAGGATGCAACAAGTGAAGATTaGAAAATGTCACACCTTGTTTTGAAGATGGAGAGTCAAGTTATG | + |
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Preference number: 1 (lower is better) Translates to: QFYIAGLVKDATSED*KMSHLVLKMESQVM Trigger: CATAACTTGACTCTCCATCTTCAAAACAAGGTGTGACATTTTCCAATCTTCACTTGTTGCATCCTTCACAAGACCTGCAATGTAGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCAACGTGCCTAAGACATaGGTGTGTCCACAGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SAVLIKATLVWKATSLTGNVPKT*VCPQEN Trigger: ATTTTCCTGTGGACACACCCATGTCTTAGGCACGTT...GCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAAGTTATGCACCACTTaGGAGAGCCATCTTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDKLCTT*ESHLSS Trigger: GCTACTAAGATGGCTCTCTCAAGTGGTGCATAACTT...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAACGTGCCTAAGACATaGGTGTGTCCACAGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDNVPKT*VCPQEN Trigger: ATTTTCCTGTGGACACACCCATGTCTTAGGCACGTT...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR TCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGAAGTTATGCACCACTTaGGAGAGCCATCTTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: LIKATLVWKATSLTGFEQKLCTT*ESHLSS Trigger: GCTACTAAGATGGCTCTCTCAAGTGGTGCATAACTT...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR TCA 90 bp | TCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTGTCACACCTTGTTTTaGAGATGGAGAGTCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: SAVLIKATLVWKATSLTGCHTLF*RWRVKL Trigger: TAACTTGACTCTCCATCTTCAAAACAAGGTGTGACA...GCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACGAAGGATGCAACAAGTaGAGATTGGAAAATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: KATLVWKATSLTGFEQFYEGCNK*RLENVT Trigger: TGTGACATTTTCCAATCTTCACTTGTTGCATCCTTC...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR GCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTCGACCTAATAACATTTaGCCAGTTCTCACCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLRPNNI*PVLTCC Trigger: ACAACAGGTGAGAACTGGGCAAATGTTATTAGGTCG...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR TCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGTCACACCTTGTTTTaGAGATGGAGAGTCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLCHTLF*RWRVKL Trigger: TAACTTGACTCTCCATCTTCAAAACAAGGTGTGACA...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCACGACCTAATAACATTTaGCCAGTTCTCACCTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLVWKATSLTGFEQFYIARPNNI*PVLTCC Trigger: ACAACAGGTGAGAACTGGGCAAATGTTATTAGGTCG...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACGCAACAAGTGAAGATTaGAAAATGTCACACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: KATLVWKATSLTGFEQFYATSED*KMSHLV Trigger: AACAAGGTGTGACATTTTCCAATCTTCACTTGTTGC...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR CAA 90 bp | GTGAAGGATGCAACAAGTGAAGATTGGAAAATGTCACACCTTGTTTaGAAGATGGAGAGTCAAGTTATGCACCACTTGAGAGAGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: VKDATSEDWKMSHLV*KMESQVMHHLREPS Trigger: AGATGGCTCTCTCAAGTGGTGCATAACTTGACTCTCCATCTTCAAAACAAGGTGTGACATTTTCCAATCTTCACTTGTTGCATCCTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR CCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTGCAACAAGTGAAGATTaGAAAATGTCACACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLATSED*KMSHLV Trigger: AACAAGGTGTGACATTTTCCAATCTTCACTTGTTGC...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCAGCAACAAGTGAAGATTaGAAAATGTCACACCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: TLVWKATSLTGFEQFYIAATSED*KMSHLV Trigger: AACAAGGTGTGACATTTTCCAATCTTCACTTGTTGC...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR TCA 72 bp | CATCAGAGAGCACACTGCAATTTTCAAGTAGACAACTaGGAAAGAACAAGTCTGCATGCTGCCTTCACGGTG | + |
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Preference number: 3 (lower is better) Translates to: HQRAHCNFQVDN*ERTSLHAAFTV Trigger: CACCGTGAAGGCAGCATGCAGACTTGTTCTTTCTCAGTTGTCTACTTGAAAATTGCAGTGTGCTCTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 |
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| 3UTR-3UTR CAA 90 bp | TCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCATGTCACACCTTGTTTaGAAGATGGAGAGTCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SAVLIKATLVWKATSLTGMSHLV*KMESQV Trigger: AACTTGACTCTCCATCTTCAAAACAAGGTGTGACAT...GCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR-3UTR CAA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTATGTCACACCTTGTTTaGAAGATGGAGAGTCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLMSHLV*KMESQV Trigger: AACTTGACTCTCCATCTTCAAAACAAGGTGTGACAT...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR CCA 72 bp | ATTGCAGGTCTTGTGAAGGATGCAACAAGTGAAGATTaGAAAATGTCACACCTTGTTTTGAAGATGGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: IAGLVKDATSED*KMSHLVLKMES Trigger: ACTCTCCATCTTCAAAACAAGGTGTGACATTTTCCAATCTTCACTTGTTGCATCCTTCACAAGACCTGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| 3UTR TCA 72 bp | GTTCTACATTGCAGGTCTTGTGAAGGATGCAACAAGTaGAGATTGGAAAATGTCACACCTTGTTTTGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: VLHCRSCEGCNK*RLENVTPCFED Trigger: ATCTTCAAAACAAGGTGTGACATTTTCCAATCTTCACTTGTTGCATCCTTCACAAGACCTGCAATGTAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACCATAGTGTGGCCGGGTaGGTCGGAGGAGCCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYHSVAG*VGGAGR Trigger: GCGCCCGGCTCCTCCGACCCACCCGGCCACACTATG...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118015.9 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATAGCGGCCGTCACGTaGCCGCGCAGGCTCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYIAAVT*PRRLKP Trigger: GGGCTTGAGCCTGCGCGGCCACGTGACGGCCGCTAT...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118015.9 |
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| CDS-3UTR CCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGCATAGTGTGGCCGGGTaGGTCGGAGGAGCCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQHSVAG*VGGAGR Trigger: GCGCCCGGCTCCTCCGACCCACCCGGCCACACTATG...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118015.9 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTGGACATAGAAGGTTGTaGTGCAGCTGGGGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLGHRRL*CSWGLP Trigger: GGGGAGGCCCCAGCTGCACCACAACCTTCTATGTCC...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR GCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACCATAGAAGGTTGTGGTaGAGCTGGGGCCTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYHRRLW*SWGLPK Trigger: TTTGGGGAGGCCCCAGCTGCACCACAACCTTCTATG...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGGGACATAGAAGGTTGTaGTGCAGCTGGGGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQGHRRL*CSWGLP Trigger: GGGGAGGCCCCAGCTGCACCACAACCTTCTATGTCC...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR GCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTCATAGAAGGTTGTGGTaGAGCTGGGGCCTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLHRRLW*SWGLPK Trigger: TTTGGGGAGGCCCCAGCTGCACCACAACCTTCTATG...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACGGACCAGCGCACCTTTaGCATAGGCATCGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDGPAHL*HRHRLW Trigger: CCACAAACGATGCCTATGCCAAAGGTGCGCTGGTCC...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTGGACCAGCGCACCTTTaGCATAGGCATCGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLGPAHL*HRHRLW Trigger: CCACAAACGATGCCTATGCCAAAGGTGCGCTGGTCC...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCCAGGTTCAGAAACTCTaGGTGACTCACGGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SAVLIKATLVWKATSLTGQVQKL*VTHGWV Trigger: GACCCAACCGTGAGTCACCCAGAGTTTCTGAACCTG...GCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACCCTGGGAGTCACAGTTaGCACTTTTTGTTTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYPGSHS*HFLFGG Trigger: ACCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGG...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | ACTTCACATACTATGTATGGAAACGTGCCTAAGACATGGGTGTGTCCACAGGAAGTAAGACGTTGGTGGTaGAGGTGTCCCACCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: TSHTMYGNVPKTWVCPQEVRRWW*RCPTTG Trigger: ACCTGTGGTGGGACACCTTCACCACCAACGTCTTAC...TTCCTGTGGACACACCCATGTCTTAGGCACGTTTCCATACATAGTATGTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGGTAAGACGTTGGTGGTaGAGGTGTCCCACCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQVRRWW*RCPTTG Trigger: ACCTGTGGTGGGACACCTTCACCACCAACGTCTTAC...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR GCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCACATAGAAGGTTGTGGTaGAGCTGGGGCCTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TLVWKATSLTGFEQFYIAHRRLW*SWGLPK Trigger: TTTGGGGAGGCCCCAGCTGCACCACAACCTTCTATG...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGGGACCAGCGCACCTTTaGCATAGGCATCGTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQGPAHL*HRHRLW Trigger: CCACAAACGATGCCTATGCCAAAGGTGCGCTGGTCC...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTCTCACGGTTGGGTCCTaGGAGTCACAGTTGACACTT | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLLTVGS*ESQLTL Trigger: AAGTGTCAACTGTGACTCCCAGGACCCAACCGTGAG...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTCCTGGGAGTCACAGTTaGCACTTTTTGTTTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLPGSHS*HFLFGG Trigger: ACCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGG...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCAAGGAGCTGGCATCTTTaGCAAGGCCATGGTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: TLVWKATSLTGFEQFYIARSWHL*QGHGVG Trigger: TCCAACACCATGGCCTTGTCAAAGATGCCAGCTCCT...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | ACTTCACATACTATGTATGGAAACGTGCCTAAGACATGGGTGTGTCCACAGGAAAGGAGCTGGCATCTTTaGCAAGGCCATGGTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: TSHTMYGNVPKTWVCPQERSWHL*QGHGVG Trigger: TCCAACACCATGGCCTTGTCAAAGATGCCAGCTCCT...TTCCTGTGGACACACCCATGTCTTAGGCACGTTTCCATACATAGTATGTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACCATAGGCATCGTTTGTaGTCAGCGTCACAAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYHRHRL*SASQKP Trigger: AGGCTTTTGTGACGCTGACCACAAACGATGCCTATG...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACGTATTCAGTAGGCCCTaGTCCCCACCATCAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYVFSRP*SPPSKL Trigger: TAGTTTTGATGGTGGGGACCAGGGCCTACTGAATAC...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCACTCACGGTTGGGTCCTaGGAGTCACAGTTGACACTT | + |
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Preference number: 4 (lower is better) Translates to: TLVWKATSLTGFEQFYIALTVGS*ESQLTL Trigger: AAGTGTCAACTGTGACTCCCAGGACCCAACCGTGAG...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGCTCACGGTTGGGTCCTaGGAGTCACAGTTGACACTT | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQLTVGS*ESQLTL Trigger: AAGTGTCAACTGTGACTCCCAGGACCCAACCGTGAG...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | ACTTCACATACTATGTATGGAAACGTGCCTAAGACATGGGTGTGTCCACAGGAACAGGTTCAGAAACTCTaGGTGACTCACGGTTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TSHTMYGNVPKTWVCPQEQVQKL*VTHGWV Trigger: GACCCAACCGTGAGTCACCCAGAGTTTCTGAACCTG...TTCCTGTGGACACACCCATGTCTTAGGCACGTTTCCATACATAGTATGTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGCCTGGGAGTCACAGTTaGCACTTTTTGTTTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQPGSHS*HFLFGG Trigger: ACCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGG...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACCATAGGCATCGTTTGTaGTCAGCGTCACAAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDHRHRL*SASQKP Trigger: AGGCTTTTGTGACGCTGACCACAAACGATGCCTATG...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTGTATTCAGTAGGCCCTaGTCCCCACCATCAAAACTA | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLVFSRP*SPPSKL Trigger: TAGTTTTGATGGTGGGGACCAGGGCCTACTGAATAC...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACTTCCTTCCTTTCTTCTaGGGACATAGAAGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDFLPFF*GHRRLW Trigger: CCACAACCTTCTATGTCCTCAGAAGAAAGGAAGGAA...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR GCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACGTTATCAAAAGAATCTaGTCCCATGTAATCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYVIKRI*SHVIGL Trigger: CAGGCCGATTACATGGGAGCAGATTCTTTTGATAAC...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATAAGTGTAATTCCATaGCTTGGTTCGTCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KATLVWKATSLTGFEQFYISVIP*LGSSQE Trigger: TTCCTGGGACGAACCAAGCCATGGAATTACACTTAT...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCATTCCTTCCTTTCTTCTaGGGACATAGAAGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TLVWKATSLTGFEQFYIAFLPFF*GHRRLW Trigger: CCACAACCTTCTATGTCCTCAGAAGAAAGGAAGGAA...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR TCA 90 bp | ACTTCACATACTATGTATGGAAACGTGCCTAAGACATGGGTGTGTCCACAGGAATTCCTTCCTTTCTTCTaGGGACATAGAAGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TSHTMYGNVPKTWVCPQEFLPFF*GHRRLW Trigger: CCACAACCTTCTATGTCCTCAGAAGAAAGGAAGGAA...TTCCTGTGGACACACCCATGTCTTAGGCACGTTTCCATACATAGTATGTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTGTAAGTGACCAGCAGTaGAGTTTAGTCAATGTGATG | + |
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Preference number: 4 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLVSDQQ*SLVNVM Trigger: CATCACATTGACTAAACTCCACTGCTGGTCACTTAC...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR GCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGGTTATCAAAAGAATCTaGTCCCATGTAATCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQVIKRI*SHVIGL Trigger: CAGGCCGATTACATGGGAGCAGATTCTTTTGATAAC...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGGTAAGTGACCAGCAGTaGAGTTTAGTCAATGTGATG | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQVSDQQ*SLVNVM Trigger: CATCACATTGACTAAACTCCACTGCTGGTCACTTAC...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCAGTAAGTGACCAGCAGTaGAGTTTAGTCAATGTGATG | + |
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Preference number: 4 (lower is better) Translates to: TLVWKATSLTGFEQFYIAVSDQQ*SLVNVM Trigger: CATCACATTGACTAAACTCCACTGCTGGTCACTTAC...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CCA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGATAAGTGTAATTCCATaGCTTGGTTCGTCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LIKATLVWKATSLTGFEQISVIP*LGSSQE Trigger: TTCCTGGGACGAACCAAGCCATGGAATTACACTTAT...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | TTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGAGCAGGGGTAAGACGTaGGTGGTGAAGGTGTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LIKATLVWKATSLTGFEQSRGKT*VVKVSH Trigger: GTGGGACACCTTCACCACCAACGTCTTACCCCTGCT...CTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCAAGCAGGGGTAAGACGTaGGTGGTGAAGGTGTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TLVWKATSLTGFEQFYIASRGKT*VVKVSH Trigger: GTGGGACACCTTCACCACCAACGTCTTACCCCTGCT...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | TCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTGGCATAGGCATCGTTaGTGGTCAGCGTCACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SAVLIKATLVWKATSLTGWHRHR*WSASQK Trigger: CTTTTGTGACGCTGACCACAAACGATGCCTATGCCA...GCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | AAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACTCCTGGGAGTCACAGTaGACACTTTTTGTTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: KATLVWKATSLTGFEQFYSWESQ*TLFVWG Trigger: CCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGGA...GTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACTGGCATAGGCATCGTTaGTGGTCAGCGTCACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDWHRHR*WSASQK Trigger: CTTTTGTGACGCTGACCACAAACGATGCCTATGCCA...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTCCTGGGAGTCACAGTaGACACTTTTTGTTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLSWESQ*TLFVWG Trigger: CCCCCAAACAAAAAGTGTCAACTGTGACTCCCAGGA...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | ACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTTGAGCAGTTCTACATTGCATGGCATAGGCATCGTTaGTGGTCAGCGTCACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: TLVWKATSLTGFEQFYIAWHRHR*WSASQK Trigger: CTTTTGTGACGCTGACCACAAACGATGCCTATGCCA...TGCAATGTAGAACTGCTCAAAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | TCACTCCGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGAAGTGCACAACTTaGGCATTTTTACCAAACGCT | + |
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Preference number: 5 (lower is better) Translates to: SLRSVNKGHFSLEGYFSDRKCTT*AFLPNA Trigger: AGCGTTTGGTAAAAATGCCAAAGTTGTGCACTTCCT...GTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCGGAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS-3UTR CAA 90 bp | CGCAGTGTTAATAAAGGCCACTTTAGTCTGGAAGGCTACTTCTCTGACAGGCTTAGGAAGTGCACAACTTaGGCATTTTTACCAAACGCT | + |
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Preference number: 5 (lower is better) Translates to: RSVNKGHFSLEGYFSDRLRKCTT*AFLPNA Trigger: AGCGTTTGGTAAAAATGCCAAAGTTGTGCACTTCCT...AAGCCTGTCAGAGAAGTAGCCTTCCAGACTAAAGTGGCCTTTATTAACACTGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS CCA 72 bp | GGTGGTGAAGGTGTCCCACCACAGGTTCAGAAACTCTaGGTGACTCACGGTTGGGTCCTGGGAGTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: GGEGVPPQVQKL*VTHGWVLGVTV Trigger: AACTGTGACTCCCAGGACCCAACCGTGAGTCACCCAGAGTTTCTGAACCTGTGGTGGGACACCTTCACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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| CDS TCA 72 bp | AGACATGTTCCATCATTAGATAGGAGCTGGCATCTTTaGCAAGGCCATGGTGTTGGAGCAGGGGTAAGACGT | + |
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Preference number: 6 (lower is better) Translates to: RHVPSLDRSWHL*QGHGVGAGVRR Trigger: ACGTCTTACCCCTGCTCCAACACCATGGCCTTGTCAAAGATGCCAGCTCCTATCTAATGATGGAACATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 |
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| CDS TCA 72 bp | AGTCTGAAAGCATCATTAGATAGGAGCTGGCATCTTTaGCAAGGCCATGGTGTTGGAGCAGGGGTAAGACGT | + |
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Preference number: 6 (lower is better) Translates to: SLKASLDRSWHL*QGHGVGAGVRR Trigger: ACGTCTTACCCCTGCTCCAACACCATGGCCTTGTCAAAGATGCCAGCTCCTATCTAATGATGCTTTCAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184552.2 |
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| CDS CAA 72 bp | TTCCATGGCTTGGTTCGTCCCAGGAAGTGCACAACTTaGGCATTTTTACCAAACGCTTTAAATGCCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FHGLVRPRKCTT*AFLPNALNAGR Trigger: CCTCCCGGCATTTAAAGCGTTTGGTAAAAATGCCAAAGTTGTGCACTTCCTGGGACGAACCAAGCCATGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118015.9 ENSMUST00000178328.8 ENSMUST00000184552.2 |
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