Pregenerated sensors for GXYLT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036197Ensembl transcript IDs: ENSMUST00000049484.13, ENSMUST00000057896.5, ENSMUST00000230063.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCCCGTGTGCGGTAAAACCGGGCTCCATCAACACTGGCATGGCTaGGGAGCTCCACGCGTTCCTCCAGTCACCCCTTCCAGGCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: EPVCGKTGLHQHWHG*GAPRVPPVTPSRPH Trigger: GTGAGGCCTGGAAGGGGTGACTGGAGGAACGCGTGGAGCTCCTCAGCCATGCCAGTGTTGATGGAGCCCGGTTTTACCGCACACGGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CCA 90 bp | CTAACGAGCTACACTGCACACCGTCCACAGGGGCTGCCTTTACGATaGCGTTCTGCCAAGGAACCCTGGCTGCTGCTCCCTCAACCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LTSYTAHRPQGLPLR*RSAKEPWLLLPQPV Trigger: GACAGGTTGAGGGAGCAGCAGCCAGGGTTCCTTGGCAGAACGCCATCGTAAAGGCAGCCCCTGTGGACGGTGTGCAGTGTAGCTCGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR TCA 90 bp | AGATCACGTGCCCCAGGACAGCACATGCTGCCCGCTCAGAGTCCGTaGGGTGTCAAGGCAACACGAGCAAGGAGCACTCTTCCAGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RSRAPGQHMLPAQSP*GVKATRARSTLPEF Trigger: AAACTCTGGAAGAGTGCTCCTTGCTCGTGTTGCCTTGACACCTCACGGACTCTGAGCGGGCAGCATGTGCTGTCCTGGGGCACGTGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CCA 90 bp | TGGATCCCTTGGCACTGGAGTTACAGAGAGCTGTGGACCACCATGTaGGTGCTGGCACCAAGTGCTGGTAATGACTGCGCCACTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: WIPWHWSYRELWTTM*VLAPSAGNDCATLS Trigger: AGACAGAGTGGCGCAGTCATTACCAGCACTTGGTGCCAGCACCCACATGGTGGTCCACAGCTCTCTGTAACTCCAGTGCCAAGGGATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR CCA 90 bp | AGAAGAGTGTGTTGGATCCCTTGGCACTGGAGTTACAGAGAGCTGTaGACCACCATGTGGGTGCTGGCACCAAGTGCTGGTAATGACTGC | + |
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Preference number: 1 (lower is better) Translates to: RRVCWIPWHWSYREL*TTMWVLAPSAGNDC Trigger: GCAGTCATTACCAGCACTTGGTGCCAGCACCCACATGGTGGTCCACAGCTCTCTGTAACTCCAGTGCCAAGGGATCCAACACACTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR CCA 90 bp | CTGTGTCTGGTGTCCACAGAGGTTAGAAGAGTGTGTTGGATCCCTTaGCACTGGAGTTACAGAGAGCTGTGGACCACCATGTGGGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LCLVSTEVRRVCWIP*HWSYRELWTTMWVL Trigger: CAGCACCCACATGGTGGTCCACAGCTCTCTGTAACTCCAGTGCCAAGGGATCCAACACACTCTTCTAACCTCTGTGGACACCAGACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR CCA 90 bp | GTGCACCACCTGTGTCTGGTGTCCACAGAGGTTAGAAGAGTGTGTTaGATCCCTTGGCACTGGAGTTACAGAGAGCTGTGGACCACCATG | + |
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Preference number: 1 (lower is better) Translates to: VHHLCLVSTEVRRVC*IPWHWSYRELWTTM Trigger: CATGGTGGTCCACAGCTCTCTGTAACTCCAGTGCCAAGGGATCCAACACACTCTTCTAACCTCTGTGGACACCAGACACAGGTGGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR CCA 90 bp | TCAGACAACTGCGCTCAGCACAGCAACAGACCCAAGCAAACTGCTTaGCAGAAGGGAACCCTTGCACTGTTCCGGGTTCTCATTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: SDNCAQHSNRPKQTA*QKGTLALFRVLISI Trigger: GATGGAAATGAGAACCCGGAACAGTGCAAGGGTTCCCTTCTGCCAAGCAGTTTGCTTGGGTCTGTTGCTGTGCTGAGCGCAGTTGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR GCA 90 bp | TGTAGCAAGACCCTGACGGGTGACAGACTGACCAGTGAGAGCCGCTaGACGAGGCTCTTACCTCTTCTCATCTTCCATTATTTTCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: CSKTLTGDRLTSESR*TRLLPLLIFHYFLY Trigger: GTACAGAAAATAATGGAAGATGAGAAGAGGTAAGAGCCTCGTGCAGCGGCTCTCACTGGTCAGTCTGTCACCCGTCAGGGTCTTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CCA 90 bp | GCAAAGGCCACATTGGCCTTGCATGTACCTCAGGTTCCCAAGTATTaGGTGACAGGTCACGTGCCACCATGCCCAGTTTTGATCCTTATT | + |
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Preference number: 1 (lower is better) Translates to: AKATLALHVPQVPKY*VTGHVPPCPVLILI Trigger: AATAAGGATCAAAACTGGGCATGGTGGCACGTGACCTGTCACCCAATACTTGGGAACCTGAGGTACATGCAAGGCCAATGTGGCCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR CCA 90 bp | CAAAAGGATCCTGGAAATGCACTTGAGGTAGAAGGGAAGTCTGAATaGACCACTGTTAACCTCACAGGCTTATGTATTTGGTCCGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: QKDPGNALEVEGKSE*TTVNLTGLCIWSVA Trigger: TGCAACGGACCAAATACATAAGCCTGTGAGGTTAACAGTGGTCCATTCAGACTTCCCTTCTACCTCAAGTGCATTTCCAGGATCCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR GCA 90 bp | GACAGCTCAACCATCTTTCTAAAAACATCTCAAAGAGGTTGGCTGTaGTTGTGCTATTTACTACAAGCAACTGAAGAGGGCACTGAGTAT | + |
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Preference number: 1 (lower is better) Translates to: DSSTIFLKTSQRGWL*LCYLLQATEEGTEY Trigger: ATACTCAGTGCCCTCTTCAGTTGCTTGTAGTAAATAGCACAAGCACAGCCAACCTCTTTGAGATGTTTTTAGAAAGATGGTTGAGCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR TCA 90 bp | GTAATAATTTCCATGCTTCCTAAACTAGCTGATATCGGATCCTTCTaGGGAACTCATTTAAAGCAGAATCACCATGTCCCATGCGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: VIISMLPKLADIGSF*GTHLKQNHHVPCVA Trigger: AGCTACGCATGGGACATGGTGATTCTGCTTTAAATGAGTTCCTCAGAAGGATCCGATATCAGCTAGTTTAGGAAGCATGGAAATTATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR TCA 90 bp | ACTTGTAACAGTTCAAATAGAAGTATCCCTACTGAACTACCACAGTaGGACAGTTTACTTTTCAAATGGCATATAGGCTGTTGCGATCTC | + |
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Preference number: 1 (lower is better) Translates to: TCNSSNRSIPTELPQ*DSLLFKWHIGCCDL Trigger: GAGATCGCAACAGCCTATATGCCATTTGAAAAGTAAACTGTCTCACTGTGGTAGTTCAGTAGGGATACTTCTATTTGAACTGTTACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR TCA 90 bp | TGTCTTCTCCCTGGAGCACAAGAGTTCAACTTACTCTTCATGACATaGATATACTGCTCTTTAATTCTTCCAAAGAGAATTATTGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: CLLPGAQEFNLLFMT*IYCSLILPKRIIVE Trigger: CTCCACAATAATTCTCTTTGGAAGAATTAAAGAGCAGTATATTCATGTCATGAAGAGTAAGTTGAACTCTTGTGCTCCAGGGAGAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGAGGAGCTCCACGCGTTCCTCCAGTCACCCCTTCCAGGCCTCACCTCTTCCTAGGTGTAGGAGATaGAGGACAGCTGACTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: WLRSSTRSSSHPFQASPLPRCRR*RTADFG Trigger: GCCAAAGTCAGCTGTCCTGCATCTCCTACACCTAGG...AAGAGGTGAGGCCTGGAAGGGGTGACTGGAGGAACGCGTGGAGCTCCTCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR-3UTR GCA 90 bp | GTACGTGAGATCACGTGCCCCAGGACAGCACATGCTGCCCGCTCAGAGTCCGTGGCCCACACTGTCCAATaGTTTCACTACTGCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: VREITCPRTAHAARSESVAHTVQ*FHYCWN Trigger: ATTCCAGCAGTAGTGAAAGCATTGGACAGTGTGGGC...CACGGACTCTGAGCGGGCAGCATGTGCTGTCCTGGGGCACGTGATCTCACGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | AGCACAGCAACAGACCCAAGCAAACTGCTTGGCAGAAGGGAACCCTaGCACTGTTCCGGGTTCTCATTTCCATCTCTCTGCCCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: STATDPSKLLGRREP*HCSGFSFPSLCPAP Trigger: TGGAGCAGGGCAGAGAGATGGAAATGAGAACCCGGAACAGTGCAAGGGTTCCCTTCTGCCAAGCAGTTTGCTTGGGTCTGTTGCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTGCTGCTCCCTCAACCTGTCTGAGTACTGAGCTAGTTAACAATTCCTCCGTACGTGAGATCACGTaGCCCAGGACAGCACATGCT | + |
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Preference number: 2 (lower is better) Translates to: LAAAPSTCLSTELVNNSSVREIT*PRTAHA Trigger: AGCATGTGCTGTCCTGGGGCACGTGATCTCACGTAC...GGAGGAATTGTTAACTAGCTCAGTACTCAGACAGGTTGAGGGAGCAGCAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | TTCAGACAACTGCGCTCAGCACAGCAACAGACCCAAGCAAACTGCTaGGCAGAAGGGAACCCTTGCACTGTTCCGGGTTCTCATTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: FRQLRSAQQQTQANC*AEGNPCTVPGSHFH Trigger: ATGGAAATGAGAACCCGGAACAGTGCAAGGGTTCCCTTCTGCCAAGCAGTTTGCTTGGGTCTGTTGCTGTGCTGAGCGCAGTTGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTTGGCTGTGCTTGTGCTATTTACTACAAGCAACTGAAGAGGGCACTGAGACCGTCCACAGGGGCTaGCTTTACGATGGCGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RGWLCLCYLLQATEEGTETVHRG*LYDGVL Trigger: CAGAACGCCATCGTAAAGGCAGCCCCTGTGGACGGT...CTCAGTGCCCTCTTCAGTTGCTTGTAGTAAATAGCACAAGCACAGCCAACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR CCA 90 bp | TCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCCCAAAGAGAATTATTGTaGAGACAGAAATGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: STLPGLPYLITSQPSSQPQRELL*RQKCLP Trigger: AGGGAGGCATTTCTGTCTCCACAATAATTCTCTTTG...GGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCCGACTGTCTTCTCCCTaGAGCACAAGAGTTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: RGTLSPSTLPGLPYLITSRLSSP*STRVQL Trigger: AAGTTGAACTCTTGTGCTCCAGGGAGAAGACAGTCG...GCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | TTATTGCTAAACTCACAGCTTGAGTCTCCACCACGTCGAGGTACATaGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLLNSQLESPPRRGT*SPSTLPGLPYLITS Trigger: GCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCGACGTGGTGGAGACTCAAGCTGTGAGTTTAGCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTACTGAGAAAATGGCATCTGAAGGGACTTACTCATATGAATCCCTCTGTCTCTGCCAAGGAACCCTaGCTGCTGCTCCCTCAACCT | + |
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Preference number: 2 (lower is better) Translates to: QLLRKWHLKGLTHMNPSVSAKEP*LLLPQP Trigger: AGGTTGAGGGAGCAGCAGCCAGGGTTCCTTGGCAGA...GACAGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAGTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAAATGTAGCAAGACCCTGACGGGTGACAGACTGACCAGTGAGAGCCGCTGCCAAAGAGAATTATTGTaGAGACAGAAATGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SKCSKTLTGDRLTSESRCQRELL*RQKCLP Trigger: AGGGAGGCATTTCTGTCTCCACAATAATTCTCTTTG...GCAGCGGCTCTCACTGGTCAGTCTGTCACCCGTCAGGGTCTTGCTACATTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR-3UTR GCA 90 bp | TACTTGATTACGAGCCAACCCAGCTCACAGCCCACACTGTCCAATGCTTTCACTTTGTGGAGACAGAAATaGCTCCCTAAATCCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: YLITSQPSSQPTLSNAFTLWRQK*LPKSFS Trigger: GGAAAAGGATTTAGGGAGGCATTTCTGTCTCCACAA...AGTGAAAGCATTGGACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGCATTTTCAAATCCTTTCTTTAAACAGCCTCAGTCAATCACAGTGGAACTGTACTGCCGGGCCCTaGCCACATAAAGCAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LVHFQILSLNSLSQSQWNCTAGP*PHKAST Trigger: AGTGCTTGCTTTATGTGGTCAGGGCCCGGCAGTACA...GTTCCACTGTGATTGACTGAGGCTGTTTAAAGAAAGGATTTGAAAATGCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | TCCCTAAATCCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTaGCTTGTCTCATCCATTTCCTTCGGTCATGAAGAATCACCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SLNPFPVYSFTSPEA*LVSSISFGHEESPF Trigger: GAAAGGTGATTCTTCATGACCGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGATTTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR CCA 90 bp | GGTAATGACTGCGCCACTCTGTCTGACAGTGACGATTCTTTAAGGTTTTTCTTTCGACTGTCTTCTCCCTaGAGCACAAGAGTTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: GNDCATLSDSDDSLRFFFRLSSP*STRVQL Trigger: AAGTTGAACTCTTGTGCTCCAGGGAGAAGACAGTCG...AAAGAAAAACCTTAAAGAATCGTCACTGTCAGACAGAGTGGCGCAGTCATTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR GCA 90 bp | CATCTGAAGGGACTTACTCATATGAATCCCTCTGTCAAAAACCCCACTGCTTCCATGTATTTGGTCCGTTaGATTTTCCACAGTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HLKGLTHMNPSVKNPTASMYLVR*IFHSPF Trigger: AAAAGGACTGTGGAAAATGCAACGGACCAAATACAT...GGAAGCAGTGGGGTTTTTGACAGAGGGATTCATATGAGTAAGTCCCTTCAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTACTGAGAAAATGGCATCTGAAGGGACTTACTCATATGAATCCCTCTGTCCAAAGAGAATTATTGTaGAGACAGAAATGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QLLRKWHLKGLTHMNPSVQRELL*RQKCLP Trigger: AGGGAGGCATTTCTGTCTCCACAATAATTCTCTTTG...GACAGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAGTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGCATTTTCAAATCCTTTCTTTAAACAGCCTCAGTCAATCACAGTGGAACAAATGGGTTAAGGACTaGGGAGGAGCTGGAACCAAA | + |
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Preference number: 2 (lower is better) Translates to: LVHFQILSLNSLSQSQWNKWVKD*GGAGTK Trigger: TTTGGTTCCAGCTCCTCCCCAGTCCTTAACCCATTT...GTTCCACTGTGATTGACTGAGGCTGTTTAAAGAAAGGATTTGAAAATGCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR-3UTR GCA 90 bp | ATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGAGAGGCCCACACTGTCCAATaGTTTCACTACTGCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ILFLHNFPFFMYGLKIREAHTVQ*FHYCWN Trigger: ATTCCAGCAGTAGTGAAAGCATTGGACAGTGTGGGC...CTCTCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | AGGCAACACGAGCAAGGAGCACTCTTCCAGAGTTTAACAAGGCAATaGTCTTCAATGGTGTTCAAAATAAGAAATGCACATTTACCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RQHEQGALFQSLTRQ*SSMVFKIRNAHLPK Trigger: TTTGGGTAAATGTGCATTTCTTATTTTGAACACCATTGAAGACAATTGCCTTGTTAAACTCTGGAAGAGTGCTCCTTGCTCGTGTTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | AGCTCAACCATCTTTCTAAAAACATCTCAAAGAGGTTGGCTGTGCTaGTGCTATTTACTACAAGCAACTGAAGAGGGCACTGAGTATTTT | + |
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Preference number: 2 (lower is better) Translates to: SSTIFLKTSQRGWLC*CYLLQATEEGTEYF Trigger: AAAATACTCAGTGCCCTCTTCAGTTGCTTGTAGTAAATAGCACAAGCACAGCCAACCTCTTTGAGATGTTTTTAGAAAGATGGTTGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR GCA 90 bp | CTTCACAGACCTCCTCTAAAGGACATTAAAATGGAAAATATGTGTTTCCACAGGTTGTGGAGACAGAAATaGCTCCCTAAATCCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LHRPPLKDIKMENMCFHRLWRQK*LPKSFS Trigger: GGAAAAGGATTTAGGGAGGCATTTCTGTCTCCACAA...CCTGTGGAAACACATATTTTCCATTTTAATGTCCTTTAGAGGAGGTCTGTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CAA 90 bp | CAGTGCTCAAGTTTGATAGTAAAATATCTGGTGTTCACAGTATTATaGAGAGACACTCCCTACAAAGCTCCTGACTGTTTGAAACGTAAA | + |
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Preference number: 2 (lower is better) Translates to: QCSSLIVKYLVFTVL*RDTPYKAPDCLKRK Trigger: TTTACGTTTCAAACAGTCAGGAGCTTTGTAGGGAGTGTCTCTCAATAATACTGTGAACACCAGATATTTTACTATCAAACTTGAGCACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
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| 3UTR-3UTR CCA 90 bp | ATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGAGAGACAGGCTTATGTATTTaGTCCGTTGCATTTTCCACA | + |
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Preference number: 2 (lower is better) Translates to: ILFLHNFPFFMYGLKIRETGLCI*SVAFST Trigger: TGTGGAAAATGCAACGGACCAAATACATAAGCCTGT...CTCTCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR GCA 72 bp | GAAACCAGAATGCTCCCAGCCTCGGGGGAGCCCGTGTaGGGTAAAACCGGGCTCCATCAACACTGGCATGGC | + |
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Preference number: 3 (lower is better) Translates to: ETRMLPASGEPV*GKTGLHQHWHG Trigger: GCCATGCCAGTGTTGATGGAGCCCGGTTTTACCGCACACGGGCTCCCCCGAGGCTGGGAGCATTCTGGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR TCA 72 bp | GCCCCAGGACAGCACATGCTGCCCGCTCAGAGTCCGTaGGGTGTCAAGGCAACACGAGCAAGGAGCACTCTT | + |
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Preference number: 3 (lower is better) Translates to: APGQHMLPAQSP*GVKATRARSTL Trigger: AAGAGTGCTCCTTGCTCGTGTTGCCTTGACACCTCACGGACTCTGAGCGGGCAGCATGTGCTGTCCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR GCA 72 bp | ACACCGTCCACAGGGGCTGCCTTTACGATGGCGTTCTaGCAAGGAACCCTGGCTGCTGCTCCCTCAACCTGT | + |
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Preference number: 3 (lower is better) Translates to: TPSTGAAFTMAF*QGTLAAAPSTC Trigger: ACAGGTTGAGGGAGCAGCAGCCAGGGTTCCTTGGCAGAACGCCATCGTAAAGGCAGCCCCTGTGGACGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR GCA 72 bp | TCCAGTCACCCCTTCCAGGCCTCACCTCTTTGGCACTaGAGTCAGCACACCTCCCAAGCCCACAAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SSHPFQASPLWH*SQHTSQAHKEG Trigger: CCCCTCTTTGTGGGCTTGGGAGGTGTGCTGACTGCAGTGCCAAAGAGGTGAGGCCTGGAAGGGGTGACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR CCA 72 bp | TACACTGCACACCGTCCACAGGGGCTGCCTTTACGATaGCGTTCTGCCAAGGAACCCTGGCTGCTGCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: YTAHRPQGLPLR*RSAKEPWLLLP Trigger: AGGGAGCAGCAGCCAGGGTTCCTTGGCAGAACGCCATCGTAAAGGCAGCCCCTGTGGACGGTGTGCAGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| 3UTR TCA 72 bp | GAGCACCTGGTAGGAAGAAACATGAGCCCCAGTACGTaGGATCACGTGCCCCAGGACAGCACATGCTGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: EHLVGRNMSPST*DHVPQDSTCCP Trigger: CGGGCAGCATGTGCTGTCCTGGGGCACGTGATCTCACGTACTGGGGCTCATGTTTCTTCCTACCAGGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR GCA 72 bp | CCCTTGCACTGTTCCGGGTTCTCATTTCCATCTCTCTaGCCTGCTCCAGAGCTCACAGAATCCCTCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLHCSGFSFPSL*PAPELTESLPP Trigger: GGGAGGGAGGGATTCTGTGAGCTCTGGAGCAGGGCAGAGAGATGGAAATGAGAACCCGGAACAGTGCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR CCA 72 bp | TGCGCTCAGCACAGCAACAGACCCAAGCAAACTGCTTaGCAGAAGGGAACCCTTGCACTGTTCCGGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CAQHSNRPKQTA*QKGTLALFRVL Trigger: GAGAACCCGGAACAGTGCAAGGGTTCCCTTCTGCCAAGCAGTTTGCTTGGGTCTGTTGCTGTGCTGAGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCCACACTGTCCTCCTGAGGCGTTGCTaGTCTCATCCATTTCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: PRPSLLDYEPTQLTAHTVLLRRC*SHPFPS Trigger: CGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAG...GACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | CATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTaGTTACGAGCCAACCCAGCTCACAGCCCACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HCLHPPSQAFLT*LRANPAHSPHC Trigger: ACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR GCA 72 bp | ACCCTGACGGGTGACAGACTGACCAGTGAGAGCCGCTaGACGAGGCTCTTACCTCTTCTCATCTTCCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: TLTGDRLTSESR*TRLLPLLIFHY Trigger: ATAATGGAAGATGAGAAGAGGTAAGAGCCTCGTGCAGCGGCTCTCACTGGTCAGTCTGTCACCCGTCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR GCA 72 bp | CATACCATCAACAAATCTACACCGGAGAAACCAGAATaGTCCCAGCCTCGGGGGAGCCCGTGTGCGGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HTINKSTPEKPE*SQPRGSPCAVK Trigger: TTTTACCGCACACGGGCTCCCCCGAGGCTGGGAGCATTCTGGTTTCTCCGGTGTAGATTTGTTGATGGTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACCCAGCTCACAGCCCACACTGTCCAATGCTTTCACTACTGCTGGAATGACCTCCTGAGGCGTTGCTaGTCTCATCCATTTCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: PTQLTAHTVQCFHYCWNDLLRRC*SHPFPS Trigger: CGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAG...GTCATTCCAGCAGTAGTGAAAGCATTGGACAGTGTGGGCTGTGAGCTGGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR CCA 72 bp | GTGTCCACAGAGGTTAGAAGAGTGTGTTGGATCCCTTaGCACTGGAGTTACAGAGAGCTGTGGACCACCATG | + |
|
Preference number: 3 (lower is better) Translates to: VSTEVRRVCWIP*HWSYRELWTTM Trigger: CATGGTGGTCCACAGCTCTCTGTAACTCCAGTGCCAAGGGATCCAACACACTCTTCTAACCTCTGTGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR CCA 72 bp | CTGTGTCTGGTGTCCACAGAGGTTAGAAGAGTGTGTTaGATCCCTTGGCACTGGAGTTACAGAGAGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LCLVSTEVRRVC*IPWHWSYRELW Trigger: CCACAGCTCTCTGTAACTCCAGTGCCAAGGGATCCAACACACTCTTCTAACCTCTGTGGACACCAGACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTGCTGCTCCCTCAACCTGTCTGAGTACTGAGCTAGTTAACAATTCCTCCCTCCTGAGGCGTTGCTaGTCTCATCCATTTCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: LAAAPSTCLSTELVNNSSLLRRC*SHPFPS Trigger: CGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAG...GGAGGAATTGTTAACTAGCTCAGTACTCAGACAGGTTGAGGGAGCAGCAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | TTCGAGGCAGTAATGTCTACACAGCATGGTTCATCATaGCGTCTTCCTGCAGCTTCAGACAACTGCGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FEAVMSTQHGSS*RLPAASDNCAQ Trigger: CTGAGCGCAGTTGTCTGAAGCTGCAGGAAGACGTCATGATGAACCATGCTGTGTAGACATTACTGCCTCGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR CCA 72 bp | GAACACGTGGGGCTGAGTCTTCAGCTACTGAGAAAATaGCATCTGAAGGGACTTACTCATATGAATCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EHVGLSLQLLRK*HLKGLTHMNPS Trigger: AGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAGTAGCTGAAGACTCAGCCCCACGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | CCTAAATCCTTTTCCAGTCTATTCCTTCACATCTCCTaGGGCGTTGCTTGTCTCATCCATTTCCTTCGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PKSFSSLFLHIS*GVACLIHFLRS Trigger: TGACCGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | AGCCCACACTGTCCAATGCTTTCACTACTGCTGGAATaGCACCAAGTAACGTTACAAAATACCAGAGATCCG | + |
|
Preference number: 3 (lower is better) Translates to: SPHCPMLSLLLE*HQVTLQNTRDP Trigger: CGGATCTCTGGTATTTTGTAACGTTACTTGGTGTCATTCCAGCAGTAGTGAAAGCATTGGACAGTGTGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | GTAACAGCAATACAGTTTCTCACGAAACACCTGAGCTaGACCTCCAGAACGGAACAAGGCATCTTCCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: VTAIQFLTKHLS*TSRTEQGIFQY Trigger: GTATTGGAAGATGCCTTGTTCCGTTCTGGAGGTTCAGCTCAGGTGTTTCGTGAGAAACTGTATTGCTGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR CCA 72 bp | CCTGGAAATGCACTTGAGGTAGAAGGGAAGTCTGAATaGACCACTGTTAACCTCACAGGCTTATGTATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGNALEVEGKSE*TTVNLTGLCIW Trigger: CCAAATACATAAGCCTGTGAGGTTAACAGTGGTCCATTCAGACTTCCCTTCTACCTCAAGTGCATTTCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTCAAGGCAACACGAGCAAGGAGCACTCTTCCAGAGTTTAACAAGGCAATTATGCGGGTACATAGATaGTCAATGGTTACATTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GVKATRARSTLPEFNKAIMRVHR*SMVTLV Trigger: AACCAATGTAACCATTGACAATCTATGTACCCGCAT...AATTGCCTTGTTAAACTCTGGAAGAGTGCTCCTTGCTCGTGTTGCCTTGACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR GCA 72 bp | CTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTaGTTGTCTCATCCATTTCCTTCGGTCATGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFQSIPSHLLRR*LSHPFPSVMKN Trigger: ATTCTTCATGACCGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR-3UTR CAA 90 bp | CATCTGAAGGGACTTACTCATATGAATCCCTCTGTCAAAAACCCCACTGCTTCCTTCCAAAGAGAATTATaGTGGAGACAGAAATGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HLKGLTHMNPSVKNPTASFQREL*WRQKCL Trigger: GAGGCATTTCTGTCTCCACAATAATTCTCTTTGGAA...GGAAGCAGTGGGGTTTTTGACAGAGGGATTCATATGAGTAAGTCCCTTCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | TTCTCATCTTCCATTATTTTCTGTACTGCCGGGCCCTaGCCACATAAAGCAAGCACTCTGAATATTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSSSIIFCTAGP*PHKASTLNIEV Trigger: TACCTCAATATTCAGAGTGCTTGCTTTATGTGGTCAGGGCCCGGCAGTACAGAAAATAATGGAAGATGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | TCCATGCTTCCTAAACTAGCTGATATCGGATCCTTCTaGGGAACTCATTTAAAGCAGAATCACCATGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SMLPKLADIGSF*GTHLKQNHHVP Trigger: TGGGACATGGTGATTCTGCTTTAAATGAGTTCCTCAGAAGGATCCGATATCAGCTAGTTTAGGAAGCATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CCA 72 bp | GAATGGACCACTGTTAACCTCACAGGCTTATGTATTTaGTCCGTTGCATTTTCCACAGTCCTTTTAGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: EWTTVNLTGLCI*SVAFSTVLLVL Trigger: CAACACTAAAAGGACTGTGGAAAATGCAACGGACCAAATACATAAGCCTGTGAGGTTAACAGTGGTCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CCA 72 bp | AAAACAACAAACAGACAAACAAACAAATGGCCAGACTaGCCTCTCATTATCATGCTAGGGAAAACCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KTTNRQTNKWPD*PLIIMLGKTSG Trigger: CCCACTGGTTTTCCCTAGCATGATAATGAGAGGCCAGTCTGGCCATTTGTTTGTTTGTCTGTTTGTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR CCA 72 bp | TTACTGCTTTTAGGTTATATATATGTGTTGCCTGTGTaGAGTTATGTGCACCACCTGTGTCTGGTGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LLLLGYIYVLPV*SYVHHLCLVST Trigger: TGTGGACACCAGACACAGGTGGTGCACATAACTCCACACAGGCAACACATATATATAACCTAAAAGCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTACTGAGAAAATGGCATCTGAAGGGACTTACTCATATGAATCCCTCTGTCATGAACACACTTCATTaGTCAACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: QLLRKWHLKGLTHMNPSVMNTLH*STHTHT Trigger: TGTGTGTGTGTGTGTTGACAAATGAAGTGTGTTCAT...GACAGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAGTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR GCA 72 bp | ACCATCTTTCTAAAAACATCTCAAAGAGGTTGGCTGTaGTTGTGCTATTTACTACAAGCAACTGAAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TIFLKTSQRGWL*LCYLLQATEEG Trigger: GCCCTCTTCAGTTGCTTGTAGTAAATAGCACAAGCACAGCCAACCTCTTTGAGATGTTTTTAGAAAGATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR-3UTR CAA 90 bp | CCGATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGAATGAACACACTTCATTaGTCAACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: PILFLHNFPFFMYGLKIRMNTLH*STHTHT Trigger: TGTGTGTGTGTGTGTTGACAAATGAAGTGTGTTCAT...TCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTATCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR TCA 72 bp | CTACACTCCCCGTTACGAGTTCTCAAGATACACAAGTaGCTTAAAAGATATTCACATTATAGCAAACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LHSPLRVLKIHK*LKRYSHYSKPK Trigger: TTTTGGTTTGCTATAATGTGAATATCTTTTAAGTCACTTGTGTATCTTGAGAACTCGTAACGGGGAGTGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| 3UTR TCA 72 bp | ACTACTGTAAAACCAGTCACCTTGGTCTACCTCCATTaGATATTAAAATGCAGTAAGGCGATTATTACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TTVKPVTLVYLH*ILKCSKAIITL Trigger: TAAAGTAATAATCGCCTTACTGCATTTTAATATTCAATGGAGGTAGACCAAGGTGACTGGTTTTACAGTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAGGAGCTCCACGCGTTCCTCCAGTCACCCCTTCCAGGCCTCACCTCTTACACCGCGAGCTGGCTaGAGGCGTACAGCAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLRSSTRSSSHPFQASPLTPRAG*RRTAAS Trigger: GCTCGCTGCTGTACGCCTTCAGCCAGCTCGCGGTGT...AAGAGGTGAGGCCTGGAAGGGGTGACTGGAGGAACGCGTGGAGCTCCTCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | TACACCGGAGAAACCAGAATGCTCCCAGCCTCGGGGGAGCCCGTGTGCGGTAAAGGGCTCCTCGTGTTCTaGTGCCATCGCAGCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YTGETRMLPASGEPVCGKGLLVF*CHRSNL Trigger: CAAATTGCTGCGATGGCACCAGAACACGAGGAGCCC...TTTACCGCACACGGGCTCCCCCGAGGCTGGGAGCATTCTGGTTTCTCCGGTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAGGAGCTCCACGCGTTCCTCCAGTCACCCCTTCCAGGCCTCACCTCTTCTTCATACACAGCTCTaGATGCTGGCTGCTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLRSSTRSSSHPFQASPLLHTQL*MLAACR Trigger: ACGACAAGCAGCCAGCATTCAGAGCTGTGTATGAAG...AAGAGGTGAGGCCTGGAAGGGGTGACTGGAGGAACGCGTGGAGCTCCTCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | CTGCGCTCAGCACAGCAACAGACCCAAGCAAACTGCTaGGCAGAAGGGAACCCTTGCACTGTTCCGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSAQQQTQANC*AEGNPCTVPGS Trigger: AGAACCCGGAACAGTGCAAGGGTTCCCTTCTGCCAAGCAGTTTGCTTGGGTCTGTTGCTGTGCTGAGCGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR GCA 90 bp | GTACGTGAGATCACGTGCCCCAGGACAGCACATGCTGCCCGCTCAGAGTCCGTGCTGCTTCTCGGCAGTTaGTCCCATATATACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VREITCPRTAHAARSESVLLLGS*SHIYSD Trigger: ATCACTGTATATATGGGAGCAACTGCCGAGAAGCAG...CACGGACTCTGAGCGGGCAGCATGTGCTGTCCTGGGGCACGTGATCTCACGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | ACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTaGATTACGAGCCAACCCAGCTCACAGCCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSPSTLPGLPY*ITSQPSSQPTL Trigger: CAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCCACACTGTCCTCCTCGTGTTCTGGTaGCATCGCAGCAATTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRPSLLDYEPTQLTAHTVLLVFW*HRSNLC Trigger: ACACAAATTGCTGCGATGGCACCAGAACACGAGGAG...GACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR GCA 90 bp | TACACCGGAGAAACCAGAATGCTCCCAGCCTCGGGGGAGCCCGTGTGCGGTAAACTGCTTCTCGGCAGTTaGTCCCATATATACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTGETRMLPASGEPVCGKLLLGS*SHIYSD Trigger: ATCACTGTATATATGGGAGCAACTGCCGAGAAGCAG...TTTACCGCACACGGGCTCCCCCGAGGCTGGGAGCATTCTGGTTTCTCCGGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | AACTCACAGCTTGAGTCTCCACCACGTCGAGGTACATaGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSQLESPPRRGT*SPSTLPGLPYL Trigger: CAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCGACGTGGTGGAGACTCAAGCTGTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR GCA 90 bp | ATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCGCAACAACAGCAAGGTaGATTTTCTCATCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHPPRPSLLDYEPTQLTAATTAR*IFSSGL Trigger: AAGGCCCGATGAGAAAATGCACCTTGCTGTTGTTGC...GGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCCACACTGTCGATGTGGACGTGCAGTaGCTTGATGCTGAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRPSLLDYEPTQLTAHTVDVDVQ*LDAENQ Trigger: CTGATTTTCAGCATCAAGCCACTGCACGTCCACATC...GACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCGATGTGGACGTGCAGTaGCTTGATGCTGAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHPPRPSLLDYEPTQLTADVDVQ*LDAENQ Trigger: CTGATTTTCAGCATCAAGCCACTGCACGTCCACATC...GGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGCACTGCAGTCAGCACACCTCCCAAGCCCACAAAGAGGGGAGTCCATGCCAAGCTATCGTGCAGTTaGTCTTCAGCAAAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGTAVSTPPKPTKRGVHAKLSCS*SSAKMW Trigger: CCACATCTTTGCTGAAGACCAACTGCACGATAGCTT...GGCATGGACTCCCCTCTTTGTGGGCTTGGGAGGTGTGCTGACTGCAGTGCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGGGCTCCTCGTGTTCTaGTGCCATCGCAGCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSRYIVSIHPPRPSLLDYGLLVF*CHRSNL Trigger: CAAATTGCTGCGATGGCACCAGAACACGAGGAGCCC...GTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | ACAGACCCAAGCAAACTGCTTGGCAGAAGGGAACCCTaGCACTGTTCCGGGTTCTCATTTCCATCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDPSKLLGRREP*HCSGFSFPSLC Trigger: GCAGAGAGATGGAAATGAGAACCCGGAACAGTGCAAGGGTTCCCTTCTGCCAAGCAGTTTGCTTGGGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCCTCCACGTGCACCTGTCTCCCCACTATCCTTCCATCTTCCTCTCACTTTTCCACAGTATGTGTaGACTGTCTTCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QFPPRAPVSPLSFHLPLTFPQYV*TVFCSS Trigger: GGAGCTGCAGAAGACAGTTCACACATACTGTGGAAA...AGTGAGAGGAAGATGGAAGGATAGTGGGGAGACAGGTGCACGTGGAGGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTCAAGGCAACACGAGCAAGGAGCACTCTTCCAGAGTTTAACAAGGCAATTGGGCTCCTCGTGTTCTaGTGCCATCGCAGCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVKATRARSTLPEFNKAIGLLVF*CHRSNL Trigger: CAAATTGCTGCGATGGCACCAGAACACGAGGAGCCC...AATTGCCTTGTTAAACTCTGGAAGAGTGCTCCTTGCTCGTGTTGCCTTGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAATATCGTAGAGCAGAGATGAAATGTATGCGGGTACATAGATTGTCAATGACACCGCGAGCTGGCTaGAGGCGTACAGCAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKYRRAEMKCMRVHRLSMTPRAG*RRTAAS Trigger: GCTCGCTGCTGTACGCCTTCAGCCAGCTCGCGGTGT...CATTGACAATCTATGTACCCGCATACATTTCATCTCTGCTCTACGATATTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCCACACTGTCGTCCACATACAACAGTaGGTCAACTTCTTTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRPSLLDYEPTQLTAHTVVHIQQ*VNFFQY Trigger: ATACTGAAAGAAGTTGACTCACTGTTGTATGTGGAC...GACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | CGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCATATTTAACAGATCCTaGTCGCCCCACGTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGTLSPSTLPGLPYLITSIFNRS*SPHVMF Trigger: GAACATCACGTGGGGCGATCAGGATCTGTTAAATAT...GCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGAGAGACACCGCGAGCTGGCTaGAGGCGTACAGCAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILFLHNFPFFMYGLKIRETPRAG*RRTAAS Trigger: GCTCGCTGCTGTACGCCTTCAGCCAGCTCGCGGTGT...CTCTCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGCTGCTCCCTCAACCTGTCTGAGTACTGAGCTAGTTAACAATTCCTCCATATTTAACAGATCCTaGTCGCCCCACGTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAAAPSTCLSTELVNNSSIFNRS*SPHVMF Trigger: GAACATCACGTGGGGCGATCAGGATCTGTTAAATAT...GGAGGAATTGTTAACTAGCTCAGTACTCAGACAGGTTGAGGGAGCAGCAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | CGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCACACCTCTGTTTCCATaGAGAATGAAGACTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGTLSPSTLPGLPYLITSTPLFP*RMKTPS Trigger: AGAAGGAGTCTTCATTCTTCATGGAAACAGAGGTGT...GCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAATATCGTAGAGCAGAGATGAAATGTATGCGGGTACATAGATTGTCAATGTCCCACTCCATCCCCTaGACCCACGCAGCGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TKYRRAEMKCMRVHRLSMSHSIP*THAATL Trigger: CAGTGTCGCTGCGTGGGTTCAGGGGATGGAGTGGGA...CATTGACAATCTATGTACCCGCATACATTTCATCTCTGCTCTACGATATTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR GCA 90 bp | TCGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCTGCTTCTCGGCAGTTaGTCCCATATATACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRYIVSIHPPRPSLLDYELLLGS*SHIYSD Trigger: ATCACTGTATATATGGGAGCAACTGCCGAGAAGCAG...CTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | GATCCCGTCTTCCGAATATTCCCAGAGGATACAGGACCATCACAACCGATACTGGATGTGGACGTGCAGTaGCTTGATGCTGAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPVFRIFPEDTGPSQPILDVDVQ*LDAENQ Trigger: CTGATTTTCAGCATCAAGCCACTGCACGTCCACATC...CAGTATCGGTTGTGATGGTCCTGTATCCTCTGGGAATATTCGGAAGACGGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTACTGAGAAAATGGCATCTGAAGGGACTTACTCATATGAATCCCTCTGTCGGCAAGAACAGCCTCTaGGACGCACAGGGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLRKWHLKGLTHMNPSVGKNSL*DAQGLK Trigger: CTTTAAGCCCTGTGCGTCCCAGAGGCTGTTCTTGCC...GACAGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAGTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTAAATCCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTGCTTGTCCTTCATACACAGCTCTaGATGCTGGCTGCTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLNPFPVYSFTSPEALLVLHTQL*MLAACR Trigger: ACGACAAGCAGCCAGCATTCAGAGCTGTGTATGAAG...GACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGATTTAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | TACTTGATTACGAGCCAACCCAGCTCACAGCCCACACTGTCCAATGCTTTCACTAAGCTATCGTGCAGTTaGTCTTCAGCAAAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLITSQPSSQPTLSNAFTKLSCS*SSAKMW Trigger: CCACATCTTTGCTGAAGACCAACTGCACGATAGCTT...AGTGAAAGCATTGGACAGTGTGGGCTGTGAGCTGGGTTGGCTCGTAATCAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | TCGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGGTCCACATACAACAGTaGGTCAACTTCTTTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRYIVSIHPPRPSLLDYEVHIQQ*VNFFQY Trigger: ATACTGAAAGAAGTTGACTCACTGTTGTATGTGGAC...CTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTGCTTGTCTCATCCATTTCCACAGTATGTGTaGACTGTCTTCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILFQSIPSHLLRRCLSHPFPQYV*TVFCSS Trigger: GGAGCTGCAGAAGACAGTTCACACATACTGTGGAAA...TGGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTAAATCCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTGCTTGTCGCAACAACAGCAAGGTaGATTTTCTCATCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLNPFPVYSFTSPEALLVATTAR*IFSSGL Trigger: AAGGCCCGATGAGAAAATGCACCTTGCTGTTGTTGC...GACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGATTTAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTAAATCCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTGCTTGTCTATACCATCCAATTCTaGGCTCCTCGTGTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLNPFPVYSFTSPEALLVYTIQF*APRVLV Trigger: CACCAGAACACGAGGAGCCCAGAATTGGATGGTATA...GACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGATTTAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACAACAAAGAGGCTTTCTaGATTGTGGGAAAACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSRYIVSIHPPRPSLLDYNKEAF*IVGKHD Trigger: ATCGTGTTTTCCCACAATCCAGAAAGCCTCTTTGTT...GTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | GAATTATTGTGGAGACAGAAATGCCTCCCTAAATCCTTTTCCAGTCTATTCCTTGGCAAGAACAGCCTCTaGGACGCACAGGGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLWRQKCLPKSFSSLFLGKNSL*DAQGLK Trigger: CTTTAAGCCCTGTGCGTCCCAGAGGCTGTTCTTGCC...AAGGAATAGACTGGAAAAGGATTTAGGGAGGCATTTCTGTCTCCACAATAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAATATCGTAGAGCAGAGATGAAATGTATGCGGGTACATAGATTGTCAATGGGCAAGAACAGCCTCTaGGACGCACAGGGCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKYRRAEMKCMRVHRLSMGKNSL*DAQGLK Trigger: CTTTAAGCCCTGTGCGTCCCAGAGGCTGTTCTTGCC...CATTGACAATCTATGTACCCGCATACATTTCATCTCTGCTCTACGATATTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | CCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTaGCTTGTCTCATCCATTTCCTTCGGTCATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFPVYSFTSPEA*LVSSISFGHEE Trigger: TTCTTCATGACCGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | TTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTGCTaGTCTCATCCATTTCCTTCGGTCATGAAGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQSIPSHLLRRC*SHPFPSVMKNH Trigger: GTGATTCTTCATGACCGAAGGAAATGGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTGGCTGTGCTTGTGCTATTTACTACAAGCAACTGAAGAGGGCACTGAGAACAAAGAGGCTTTCTaGATTGTGGGAAAACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGWLCLCYLLQATEEGTENKEAF*IVGKHD Trigger: ATCGTGTTTTCCCACAATCCAGAAAGCCTCTTTGTT...CTCAGTGCCCTCTTCAGTTGCTTGTAGTAAATAGCACAAGCACAGCCAACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCTAGGTGTAGGAGATGCAGGACAGCTGACTTTGGCAAGTTCTCTCATAAGGCTTTCTGGATTGTaGGAAAACACGATATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLGVGDAGQLTLASSLIRLSGL*ENTIFN Trigger: GTTAAATATCGTGTTTTCCCACAATCCAGAAAGCCT...TATGAGAGAACTTGCCAAAGTCAGCTGTCCTGCATCTCCTACACCTAGGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | GGTAATGACTGCGCCACTCTGTCTGACAGTGACGATTCTTTAAGGTTTTTCTTTACACCTCTGTTTCCATaGAGAATGAAGACTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNDCATLSDSDDSLRFFFTPLFP*RMKTPS Trigger: AGAAGGAGTCTTCATTCTTCATGGAAACAGAGGTGT...AAAGAAAAACCTTAAAGAATCGTCACTGTCAGACAGAGTGGCGCAGTCATTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR GCA 90 bp | TTGGTGCATTTTCAAATCCTTTCTTTAAACAGCCTCAGTCAATCACAGTGGAACGCAACAACAGCAAGGTaGATTTTCTCATCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVHFQILSLNSLSQSQWNATTAR*IFSSGL Trigger: AAGGCCCGATGAGAAAATGCACCTTGCTGTTGTTGC...GTTCCACTGTGATTGACTGAGGCTGTTTAAAGAAAGGATTTGAAAATGCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGAGAGCTCCTCGTGTTCTGGTaGCATCGCAGCAATTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILFLHNFPFFMYGLKIRELLVFW*HRSNLC Trigger: ACACAAATTGCTGCGATGGCACCAGAACACGAGGAG...CTCTCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAATATCGTAGAGCAGAGATGAAATGTATGCGGGTACATAGATTGTCAATGTATACCATCCAATTCTaGGCTCCTCGTGTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKYRRAEMKCMRVHRLSMYTIQF*APRVLV Trigger: CACCAGAACACGAGGAGCCCAGAATTGGATGGTATA...CATTGACAATCTATGTACCCGCATACATTTCATCTCTGCTCTACGATATTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | GAATTATTGTGGAGACAGAAATGCCTCCCTAAATCCTTTTCCAGTCTATTCCTTTATACCATCCAATTCTaGGCTCCTCGTGTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELLWRQKCLPKSFSSLFLYTIQF*APRVLV Trigger: CACCAGAACACGAGGAGCCCAGAATTGGATGGTATA...AAGGAATAGACTGGAAAAGGATTTAGGGAGGCATTTCTGTCTCCACAATAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTTTTCCAGTCTATTCCTTCACATCTCCTGAGGCGTTGCTTGTCTCATCCAGGCTTTCTGGATTGTaGGAAAACACGATATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPFPVYSFTSPEALLVSSRLSGL*ENTIFN Trigger: GTTAAATATCGTGTTTTCCCACAATCCAGAAAGCCT...GGATGAGACAAGCAACGCCTCAGGAGATGTGAAGGAATAGACTGGAAAAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCCGTTGCATTTTCCACAGTCCTTTTAGTGTTGCGATTAGATTCTTACTTATATTTAACAGATCCTaGTCGCCCCACGTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVRCIFHSPFSVAIRFLLIFNRS*SPHVMF Trigger: GAACATCACGTGGGGCGATCAGGATCTGTTAAATAT...AAGTAAGAATCTAATCGCAACACTAAAAGGACTGTGGAAAATGCAACGGACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | GTGAGACAGTTTACTTTTCAAATGGCATATAGGCTGTaGCGATCTCTTAATCAACTTTTAGAAGAAGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRQFTFQMAYRL*RSLNQLLEEAV Trigger: GACCGCTTCTTCTAAAAGTTGATTAAGAGATCGCAACAGCCTATATGCCATTTGAAAAGTAAACTGTCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR CCA 90 bp | CTTCACAGACCTCCTCTAAAGGACATTAAAATGGAAAATATGTGTTTCCACAGGAGGCTTTCTGGATTGTaGGAAAACACGATATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRPPLKDIKMENMCFHRRLSGL*ENTIFN Trigger: GTTAAATATCGTGTTTTCCCACAATCCAGAAAGCCT...CCTGTGGAAACACATATTTTCCATTTTAATGTCCTTTAGAGGAGGTCTGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGAGAGAACAAAGAGGCTTTCTaGATTGTGGGAAAACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILFLHNFPFFMYGLKIRENKEAF*IVGKHD Trigger: ATCGTGTTTTCCCACAATCCAGAAAGCCTCTTTGTT...CTCTCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| 3UTR CAA 72 bp | AGTTTGATAGTAAAATATCTGGTGTTCACAGTATTATaGAGAGACACTCCCTACAAAGCTCCTGACTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLIVKYLVFTVL*RDTPYKAPDCL Trigger: CAAACAGTCAGGAGCTTTGTAGGGAGTGTCTCTCAATAATACTGTGAACACCAGATATTTTACTATCAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR CAA 90 bp | AGGGGCTGCCTTTACGATGGCGTTCTGCCAAGGAACCCTGGCTGCTGCTCCCTCTGGACGTGCAGTGGCTaGATGCTGAAAATCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCLYDGVLPRNPGCCSLWTCSG*MLKIRA Trigger: AGCTCTGATTTTCAGCATCAAGCCACTGCACGTCCA...GAGGGAGCAGCAGCCAGGGTTCCTTGGCAGAACGCCATCGTAAAGGCAGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGCTGCCTTTACGATGGCGTTCTGCCAAGGAACCCTGGCTGCTGCTCCCTCTGGTCGGTAATTCCATaGACATGGAAAAACAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGCLYDGVLPRNPGCCSLWSVIP*TWKNKE Trigger: CTCTTTGTTTTTCCATGTCAATGGAATTACCGACCA...GAGGGAGCAGCAGCCAGGGTTCCTTGGCAGAACGCCATCGTAAAGGCAGCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | ATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCCAACCCAGCTCACAGCCTTTTCTCATCGGGCCTaGTTTTCATATCATACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IHPPRPSLLDYEPTQLTAFSHRA*FSYHTC Trigger: GCAGGTATGATATGAAAACAAGGCCCGATGAGAAAA...GGCTGTGAGCTGGGTTGGCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | CGAGGTACATTGTCTCCATCCACCCTCCCAGGCCTTCCTTACTTGATTACGAGCCACGTGATGTTCAGTTaGTACTTTTTAAGCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGTLSPSTLPGLPYLITSHVMFS*YFLSSG Trigger: GCCACTGCTTAAAAAGTACAAACTGAACATCACGTG...GCTCGTAATCAAGTAAGGAAGGCCTGGGAGGGTGGATGGAGACAATGTACCTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | CCCACACTGTCCAATGCTTTCACTACTGCTGGAATGACACCAAGTAACGTTACATGGACGTGCAGTGGCTaGATGCTGAAAATCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTLSNAFTTAGMTPSNVTWTCSG*MLKIRA Trigger: AGCTCTGATTTTCAGCATCAAGCCACTGCACGTCCA...TGTAACGTTACTTGGTGTCATTCCAGCAGTAGTGAAAGCATTGGACAGTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTTGGCTGTGCTTGTGCTATTTACTACAAGCAACTGAAGAGGGCACTGAGAAAGCTATCGTGCAGTaGGTCTTCAGCAAAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGWLCLCYLLQATEEGTEKAIVQ*VFSKDV Trigger: CACATCTTTGCTGAAGACCAACTGCACGATAGCTTT...CTCAGTGCCCTCTTCAGTTGCTTGTAGTAAATAGCACAAGCACAGCCAACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049484.13 |
||
| CDS-3UTR CAA 90 bp | GAATTATTGTGGAGACAGAAATGCCTCCCTAAATCCTTTTCCAGTCTATTCCTTTGGACGTGCAGTGGCTaGATGCTGAAAATCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELLWRQKCLPKSFSSLFLWTCSG*MLKIRA Trigger: AGCTCTGATTTTCAGCATCAAGCCACTGCACGTCCA...AAGGAATAGACTGGAAAAGGATTTAGGGAGGCATTTCTGTCTCCACAATAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTACTGAGAAAATGGCATCTGAAGGGACTTACTCATATGAATCCCTCTGTCCACGTGATGTTCAGTTaGTACTTTTTAAGCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLRKWHLKGLTHMNPSVHVMFS*YFLSSG Trigger: GCCACTGCTTAAAAAGTACAAACTGAACATCACGTG...GACAGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAGTAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAATATCGTAGAGCAGAGATGAAATGTATGCGGGTACATAGATTGTCAATGAAAGCTATCGTGCAGTaGGTCTTCAGCAAAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: TKYRRAEMKCMRVHRLSMKAIVQ*VFSKDV Trigger: CACATCTTTGCTGAAGACCAACTGCACGATAGCTTT...CATTGACAATCTATGTACCCGCATACATTTCATCTCTGCTCTACGATATTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| CDS-3UTR CAA 90 bp | CCGATACTGTTCCTTCATAACTTCCCTTTCTTCATGTACGGTTTAAAAATCCGACACGTGATGTTCAGTTaGTACTTTTTAAGCAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: PILFLHNFPFFMYGLKIRHVMFS*YFLSSG Trigger: GCCACTGCTTAAAAAGTACAAACTGAACATCACGTG...TCGGATTTTTAAACCGTACATGAAGAAAGGGAAGTTATGAAGGAACAGTATCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| CDS-3UTR CAA 90 bp | CTGAGAAAATGGCATCTGAAGGGACTTACTCATATGAATCCCTCTGTCAAAAACTGGTCGGTAATTCCATaGACATGGAAAAACAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LRKWHLKGLTHMNPSVKNWSVIP*TWKNKE Trigger: CTCTTTGTTTTTCCATGTCAATGGAATTACCGACCA...GTTTTTGACAGAGGGATTCATATGAGTAAGTCCCTTCAGATGCCATTTTCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCCGTTGCATTTTCCACAGTCCTTTTAGTGTTGCGATTAGATTCTTACTTTTTTCTCATCGGGCCTaGTTTTCATATCATACCTGC | + |
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Preference number: 5 (lower is better) Translates to: LVRCIFHSPFSVAIRFLLFSHRA*FSYHTC Trigger: GCAGGTATGATATGAAAACAAGGCCCGATGAGAAAA...AAGTAAGAATCTAATCGCAACACTAAAAGGACTGTGGAAAATGCAACGGACCAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000049484.13 ENSMUST00000230063.2 |
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| CDS-3UTR CAA 90 bp | ACCAAATATCGTAGAGCAGAGATGAAATGTATGCGGGTACATAGATTGTCAATGTGGTCGGTAATTCCATaGACATGGAAAAACAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TKYRRAEMKCMRVHRLSMWSVIP*TWKNKE Trigger: CTCTTTGTTTTTCCATGTCAATGGAATTACCGACCA...CATTGACAATCTATGTACCCGCATACATTTCATCTCTGCTCTACGATATTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| CDS CCA 72 bp | ACGGGTGCCGGGCAAAGCGATTATACCATCCAATTCTaGGCTCCTCGTGTTCTGGTGCCATCGCAGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: TGAGQSDYTIQF*APRVLVPSQQF Trigger: AAATTGCTGCGATGGCACCAGAACACGAGGAGCCCAGAATTGGATGGTATAATCGCTTTGCCCGGCACCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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| CDS CCA 72 bp | CTTAAAGAGCTTCTTCCAGTCCGCGGCGCTGTCACCTaGGAAGGTGATAGGGTACAGGCTGTAGTCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LKELLPVRGAVT*EGDRVQAVVKS Trigger: AGATTTGACTACAGCCTGTACCCTATCACCTTCCCAGGTGACAGCGCCGCGGACTGGAAGAAGCTCTTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049484.13 ENSMUST00000057896.5 ENSMUST00000230063.2 |
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