Pregenerated sensors for GVIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078606Ensembl transcript IDs: ENSMUST00000106766.9, ENSMUST00000176467.8, ENSMUST00000176994.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAAAGAGGGCATGTGTGATTGTATACAATGTAAAGCTGGCACATaGTCATACACTTGGAGGATGAAGCAAGCTCCAACAAGTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: SKEGMCDCIQCKAGT*SYTWRMKQAPTSEL Trigger: GAGCTCACTTGTTGGAGCTTGCTTCATCCTCCAAGTGTATGAGCATGTGCCAGCTTTACATTGTATACAATCACACATGCCCTCTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| 3UTR CAA 72 bp | TATGAAAGTTTAACTTCATATTGGTCTGCAGAAAAATaGCCCAATAGAGTGGGCCATATCGAGGAAGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: YESLTSYWSAEK*PNRVGHIEEAQ Trigger: TTGAGCTTCCTCGATATGGCCCACTCTATTGGGCAATTTTTCTGCAGACCAATATGAAGTTAAACTTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| 3UTR CAA 72 bp | CAGACCCAACCTAGAATGAATGTTTTGAGCATTAACTaGTCCCAAGCCTATTTTCTTCTTCCAAGTACAATC | + |
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Preference number: 4 (lower is better) Translates to: QTQPRMNVLSIN*SQAYFLLPSTI Trigger: GATTGTACTTGGAAGAAGAAAATAGGCTTGGGACAAGTTAATGCTCAAAACATTCATTCTAGGTTGGGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| 3UTR CAA 72 bp | CAAGCCTATTTTCTTCTTCCAAGTACAATCACATACTaGCAATGCATGAAAGCTCACTGTACTCCTTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: QAYFLLPSTITY*QCMKAHCTPFQ Trigger: TTGAAAAGGAGTACAGTGAGCTTTCATGCATTGCAAGTATGTGATTGTACTTGGAAGAAGAAAATAGGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | GACTGCAAGGCTTTCAGAGCCTGCAGTGCTTGTCCTGCCTGCCTCTaGCTGTTCTTTTTCATCTCCCTTGGAGTCTCCTGTAGCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: DCKAFRACSACPACL*LFFFISLGVSCSSA Trigger: TGCAGAGCTACAGGAGACTCCAAGGGAGATGAAAAAGAACAGGCAGAGGCAGGCAGGACAAGCACTGCAGGCTCTGAAAGCCTTGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | CCTTCTGACTGCAAGGCTTTCAGAGCCTGCAGTGCTTGTCCTGCCTaGCTCTGCCTGTTCTTTTTCATCTCCCTTGGAGTCTCCTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: PSDCKAFRACSACPA*LCLFFFISLGVSCS Trigger: GCTACAGGAGACTCCAAGGGAGATGAAAAAGAACAGGCAGAGGCAGGCAGGACAAGCACTGCAGGCTCTGAAAGCCTTGCAGTCAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | CCTGGTGCTCTATGCTTACCAGGTCTTTCCTTGGGAAGACCAGGTTaGTCCCTAGGTGGTCACAGAACAAATCCAGCCAGTGAGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: PGALCLPGLSLGRPG*SLGGHRTNPASEMQ Trigger: CTGCATCTCACTGGCTGGATTTGTTCTGTGACCACCTAGGGAGCAACCTGGTCTTCCCAAGGAAAGACCTGGTAAGCATAGAGCACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | AGCGCCCTTTTCTCCCATGTGTGTGTTGTCTGGGACTTCAGCTTCTaGAGGTCATTCCTGTCTAAATATTGTAAGGCCTGGGCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SALFSHVCVVWDFSF*RSFLSKYCKAWAEV Trigger: CACCTCGGCCCAGGCCTTACAATATTTAGACAGGAATGACCTCCAGAAGCTGAAGTCCCAGACAACACACACATGGGAGAAAAGGGCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 ENSMUST00000176994.2 |
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| CDS CCA 90 bp | CCCACTTTAGAGGCACATATGAAGCATCCCCGTCCATCAGCTCAATaGGAACACCAGCTATCATCAGGTCTGCAGCAATTTGAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PTLEAHMKHPRPSAQ*EHQLSSGLQQFEGG Trigger: GCCTCCCTCAAATTGCTGCAGACCTGATGATAGCTGGTGTTCCCATTGAGCTGATGGACGGGGATGCTTCATATGTGCCTCTAAAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | TGTAGGCCAAACAGGGCATTCAGTAGGGTAGACTTCCCTGAGCTCTaGAGGCCAAGGACAGAGAGAACAAACAGCCTTTTGTCTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: CRPNRAFSRVDFPEL*RPRTERTNSLLSPT Trigger: AGTTGGAGACAAAAGGCTGTTTGTTCTCTCTGTCCTTGGCCTGCAGAGCTCAGGGAAGTCTACCCTACTGAATGCCCTGTTTGGCCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | ATCCCCGTCCATCAGCTCAATGGGAACACCAGCTATCATCAGGTCTaGAGCAATTTGAGGGAGGCAGAGAAAAAGGCTATCTCTAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: IPVHQLNGNTSYHQV*SNLREAEKKAISRG Trigger: TCCTCTAGAGATAGCCTTTTTCTCTGCCTCCCTCAAATTGCTGCAGACCTGATGATAGCTGGTGTTCCCATTGAGCTGATGGACGGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | GGACATTGTAGCTATAGCGAGGATTGGGAGGAGCCATTGGGGGATTaGCATCCCATAGGTGAGCAAAGTAGTAGACATGTCGATTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: GHCSYSEDWEEPLGD*HPIGEQSSRHVDWH Trigger: ATGCCAATCGACATGTCTACTACTTTGCTCACCTATGGGATGGCAATCCCCCAATGGCTCCTCCCAATCCTCGCTATAGCTACAATGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | TGTTTGCTGCTTTACATCAGCCAAGTGCTCACTTTTGAAACCTTCTaGAATGGCTTTCCAGCAGTAGATTCCACCCAGTTGCAGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: CLLLYISQVLTFETF*NGFPAVDSTQLQRA Trigger: GGCCCTCTGCAACTGGGTGGAATCTACTGCTGGAAAGCCATTTCAGAAGGTTTCAAAAGTGAGCACTTGGCTGATGTAAAGCAGCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | CAGTTTCTGCTCCAGTCTCTTCCGTCCTTCCATAGTTTGGTCTTTTaGTGTAACTTCTCCCACATTCTGATGGACAAAGAGGCAACTGGG | + |
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Preference number: 5 (lower is better) Translates to: QFLLQSLPSFHSLVF*CNFSHILMDKEATG Trigger: CCCAGTTGCCTCTTTGTCCATCAGAATGTGGGAGAAGTTACAGCAAAAGACCAAACTATGGAAGGACGGAAGAGACTGGAGCAGAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | GAATTTCATTCCTTAGTTCCTGGACATTGTAGCTATAGCGAGGATTaGGAGGAGCCATTGGGGGATTGCCATCCCATAGGTGAGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: EFHSLVPGHCSYSED*EEPLGDCHPIGEQS Trigger: ACTTTGCTCACCTATGGGATGGCAATCCCCCAATGGCTCCTCCCAATCCTCGCTATAGCTACAATGTCCAGGAACTAAGGAATGAAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | CATCTGGATATCCAATGGGTGAATGTGGGGCCAGGACTCAGTGGCTaGAGGATAGCCAGGACTATCATTGTCTATAATGACATCGTCATA | + |
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Preference number: 5 (lower is better) Translates to: HLDIQWVNVGPGLSG*RIARTIIVYNDIVI Trigger: TATGACGATGTCATTATAGACAATGATAGTCCTGGCTATCCTTCAGCCACTGAGTCCTGGCCCCACATTCACCCATTGGATATCCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | TGTTGGAGGAAGCTGAGTTGTTGGGTGTGTTCCTTTGCATCTCCATaGAGACTGGTGAAGGTCAGACAATTTTCAAACGTGTCCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: CWRKLSCWVCSFASP*RLVKVRQFSNVSSP Trigger: AGGTGAGGACACGTTTGAAAATTGTCTGACCTTCACCAGTCTTCATGGAGATGCAAAGGAACACACCCAACAACTCAGCTTCCTCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | ATCAGCTCAATGGGAACACCAGCTATCATCAGGTCTGCAGCAATTTaGGGGAGGCAGAGAAAAAGGCTATCTCTAGAGGAGGAAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ISSMGTPAIIRSAAI*GRQRKRLSLEEEVS Trigger: AGAAACTTCCTCCTCTAGAGATAGCCTTTTTCTCTGCCTCCCTCAAATTGCTGCAGACCTGATGATAGCTGGTGTTCCCATTGAGCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | AAGATGCTGAAAAATACTGTTTACCAACTGATAGCCTGCACCAGCTaGAATGGAAAGCAGCAGCAGCTGCATGTCTGGCTGTTCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: KMLKNTVYQLIACTS*NGKQQQLHVWLFCF Trigger: GAAACAGAACAGCCAGACATGCAGCTGCTGCTGCTTTCCATTGCAGCTGGTGCAGGCTATCAGTTGGTAAACAGTATTTTTCAGCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | TCCAGTAACTTCTCCAGCGCCCTTTTCTCCCATGTGTGTGTTGTCTaGGACTTCAGCTTCTGGAGGTCATTCCTGTCTAAATATTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSNFSSALFSHVCVV*DFSFWRSFLSKYCK Trigger: CTTACAATATTTAGACAGGAATGACCTCCAGAAGCTGAAGTCCCAGACAACACACACATGGGAGAAAAGGGCGCTGGAGAAGTTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 ENSMUST00000176994.2 |
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| CDS CCA 90 bp | TTTCCAAGGCCAATGACTAATGTTGCCAACTCATGGTCCCAATTCTaGGATTTGTTGTTGAGTTCTGGAGCTCGAAGTCCTTCTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: FPRPMTNVANSWSQF*DLLLSSGARSPSVS Trigger: AGACACAGAAGGACTTCGAGCTCCAGAACTCAACAACAAATCCCAGAATTGGGACCATGAGTTGGCAACATTAGTCATTGGCCTTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | AGAAGAGACATGTTGGAGGAAGCTGAGTTGTTGGGTGTGTTCCTTTaGATCTCCATGAAGACTGGTGAAGGTCAGACAATTTTCAAACGT | + |
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Preference number: 5 (lower is better) Translates to: RRDMLEEAELLGVFL*ISMKTGEGQTIFKR Trigger: ACGTTTGAAAATTGTCTGACCTTCACCAGTCTTCATGGAGATGCAAAGGAACACACCCAACAACTCAGCTTCCTCCAACATGTCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | ATCAGAGTCAAGTTTCCAAGGCCAATGACTAATGTTGCCAACTCATaGTCCCAATTCTGGGATTTGTTGTTGAGTTCTGGAGCTCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: IRVKFPRPMTNVANS*SQFWDLLLSSGARS Trigger: ACTTCGAGCTCCAGAACTCAACAACAAATCCCAGAATTGGGACCATGAGTTGGCAACATTAGTCATTGGCCTTGGAAACTTGACTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | CCCTGCATCAGGAGACAGTGTTTGTTGCTTCCTTTGCAGTGTCTGTaGAAAAACACGTCATGTTTACGTTTACTGAGAAGAGAGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: PCIRRQCLLLPLQCL*KNTSCLRLLRREFM Trigger: CATGAACTCTCTTCTCAGTAAACGTAAACATGACGTGTTTTTTCACAGACACTGCAAAGGAAGCAACAAACACTGTCTCCTGATGCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | GACACGACACATCTGCTGATTTCTGTGACTGTAGCTCTTGTCCTGTaGAGATTTACTTGCATCTTGCCAACTTTTCCTAATTTGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DTTHLLISVTVALVL*RFTCILPTFPNLSE Trigger: CTCAGACAAATTAGGAAAAGTTGGCAAGATGCAAGTAAATCTCCACAGGACAAGAGCTACAGTCACAGAAATCAGCAGATGTGTCGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | AATCATTCTCCAGACTTTCCCAGTCATGATGTTCTCCATGTTTTGTaGGAACATGTGCAACTTCTTCAGACAACAGTGTCCCCATATGTT | + |
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Preference number: 5 (lower is better) Translates to: NHSPDFPSHDVLHVL*EHVQLLQTTVSPYV Trigger: AACATATGGGGACACTGTTGTCTGAAGAAGTTGCACATGTTCTCACAAAACATGGAGAACATCATGACTGGGAAAGTCTGGAGAATGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | CTGCTGATTTCTGTGACTGTAGCTCTTGTCCTGTGGAGATTTACTTaGATCTTGCCAACTTTTCCTAATTTGTCTGAGAGACCAAAGATA | + |
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Preference number: 5 (lower is better) Translates to: LLISVTVALVLWRFT*ILPTFPNLSERPKI Trigger: TATCTTTGGTCTCTCAGACAAATTAGGAAAAGTTGGCAAGATGCAAGTAAATCTCCACAGGACAAGAGCTACAGTCACAGAAATCAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | CAGATCAAAGGTGTTGATGACTGCCAGAGGTGTCTGACAAGCTTTTaGTTTTCTTTATTGTTATCAGAAACTGACATGAGGACCACAATG | + |
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Preference number: 5 (lower is better) Translates to: QIKGVDDCQRCLTSF*FSLLLSETDMRTTM Trigger: CATTGTGGTCCTCATGTCAGTTTCTGATAACAATAAAGAAAACCAAAAGCTTGTCAGACACCTCTGGCAGTCATCAACACCTTTGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | TGTTGCCAACTCATGGTCCCAATTCTGGGATTTGTTGTTGAGTTCTaGAGCTCGAAGTCCTTCTGTGTCTATAACAAGCACATAATTAAA | + |
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Preference number: 5 (lower is better) Translates to: CCQLMVPILGFVVEF*SSKSFCVYNKHIIK Trigger: TTTAATTATGTGCTTGTTATAGACACAGAAGGACTTCGAGCTCCAGAACTCAACAACAAATCCCAGAATTGGGACCATGAGTTGGCAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | GAGGTGTCTGACAAGCTTTTGGTTTTCTTTATTGTTATCAGAAACTaGCATGAGGACCACAATGATAGAAGAGACATGTTGGAGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: EVSDKLLVFFIVIRN*HEDHNDRRDMLEEA Trigger: AGCTTCCTCCAACATGTCTCTTCTATCATTGTGGTCCTCATGTCAGTTTCTGATAACAATAAAGAAAACCAAAAGCTTGTCAGACACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | CTGAATAGTCTTGGAGGAGTTCGAGAACAGAGCGCATTAAATCATTaGGAGGAAAGGCTTTTTCCAACTGTTGACGTCGAATTTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LNSLGGVREQSALNH*EERLFPTVDVEFFF Trigger: AAAGAAAAATTCGACGTCAACAGTTGGAAAAAGCCTTTCCTCTCAATGATTTAATGCGCTCTGTTCTCGAACTCCTCCAAGACTATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | CATCATCTTTATAGTCTCTGTAAACATGGCTTGTTCGTGAAAAGATaGAAATTCCATCGTTTTTATTTCGGTGCCATGTTCTGGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HHLYSLCKHGLFVKR*KFHRFYFGAMFWAN Trigger: GTTGGCCCAGAACATGGCACCGAAATAAAAACGATGGAATTTTCATCTTTTCACGAACAAGCCATGTTTACAGAGACTATAAAGATGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | ATGTGTAGTCTCCCTCACAGGGTTCAGATTTCAGCTCATTTTCTATaGTCCTCAAGATTTCATGAAAGTAATTCTGACTGTAATCACGCT | + |
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Preference number: 5 (lower is better) Translates to: MCSLPHRVQISAHFL*SSRFHESNSDCNHA Trigger: AGCGTGATTACAGTCAGAATTACTTTCATGAAATCTTGAGGATCATAGAAAATGAGCTGAAATCTGAACCCTGTGAGGGAGACTACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS GCA 90 bp | CTGAATTTGAAATCTGATATTTTCAAGATCCTTCCCCTAGATTCCTaGTGGGCAGTTGAAAGAATTTCATTCCTTAGTTCCTGGACATTG | + |
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Preference number: 5 (lower is better) Translates to: LNLKSDIFKILPLDS*WAVERISFLSSWTL Trigger: CAATGTCCAGGAACTAAGGAATGAAATTCTTTCAACTGCCCAGCAGGAATCTAGGGGAAGGATCTTGAAAATATCAGATTTCAAATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | TCTGAGAGACCAAAGATAAAATTCAATCTGAGAAGTGTTGGGATTTaGTACCACAAGGGGGAGTGCATAATGACAAATGGAAAGTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SERPKIKFNLRSVGI*YHKGECIMTNGKFR Trigger: TCTAAACTTTCCATTTGTCATTATGCACTCCCCCTTGTGGTACCAAATCCCAACACTTCTCAGATTGAATTTTATCTTTGGTCTCTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 90 bp | TTGAGCCATAGGAAGTCAACAAAGGAAGTGATTGAAGTGGCACCTTaGCAGGAGATCTTAAAACTCATAAAGAAATCATCTTTCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSHRKSTKEVIEVAP*QEILKLIKKSSFFL Trigger: GAGAAAGAAAGATGATTTCTTTATGAGTTTTAAGATCTCCTGCCAAGGTGCCACTTCAATCACTTCCTTTGTTGACTTCCTATGGCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | CTGAAACCCATCATCTTTATAGTCTCTGTAAACATGGCTTGTTCGTaGAAAGATGAAAATTCCATCGTTTTTATTTCGGTGCCATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: LKPIIFIVSVNMACS*KDENSIVFISVPCS Trigger: AGAACATGGCACCGAAATAAAAACGATGGAATTTTCATCTTTTCACGAACAAGCCATGTTTACAGAGACTATAAAGATGATGGGTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 90 bp | GAACATTGGAAGATACATCATAAATCCAACTTGTCCAAAGTTGCCTaGATTTCTCATGCAACTCTTCATCACTTAATTCCTTACCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: EHWKIHHKSNLSKVA*ISHATLHHLIPYPS Trigger: TGAAGGGTAAGGAATTAAGTGATGAAGAGTTGCATGAGAAATTCAGGCAACTTTGGACAAGTTGGATTTATGATGTATCTTCCAATGTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | TACTGTTTACCAACTGATAGCCTGCACCAGCTGCAATaGAAAGCAGCAGCAGCTGCATGTCTGGCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YCLPTDSLHQLQ*KAAAAACLAVL Trigger: CAGAACAGCCAGACATGCAGCTGCTGCTGCTTTCCATTGCAGCTGGTGCAGGCTATCAGTTGGTAAACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | GTGAAGGTCAGACAATTTTCAAACGTGTCCTCACCTTaGCCGGCAGGACAGAACCAGCAGATTTCCACCACT | + |
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Preference number: 6 (lower is better) Translates to: VKVRQFSNVSSP*PAGQNQQISTT Trigger: AGTGGTGGAAATCTGCTGGTTCTGTCCTGCCGGCCAAGGTGAGGACACGTTTGAAAATTGTCTGACCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | TCCTTAGTTCCTGGACATTGTAGCTATAGCGAGGATTaGGAGGAGCCATTGGGGGATTGCCATCCCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: SLVPGHCSYSED*EEPLGDCHPIG Trigger: ACCTATGGGATGGCAATCCCCCAATGGCTCCTCCCAATCCTCGCTATAGCTACAATGTCCAGGAACTAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | GAGGCACATATGAAGCATCCCCGTCCATCAGCTCAATaGGAACACCAGCTATCATCAGGTCTGCAGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: EAHMKHPRPSAQ*EHQLSSGLQQF Trigger: AAATTGCTGCAGACCTGATGATAGCTGGTGTTCCCATTGAGCTGATGGACGGGGATGCTTCATATGTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | GTTCCTGGAGAGCAGCATTGGAGAGTTCAAGATCATTaGTGTGAAAATGGCACGTGGCCAATGGGATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VPGEQHWRVQDH*CENGTWPMGCS Trigger: GCTACATCCCATTGGCCACGTGCCATTTTCACATCAATGATCTTGAACTCTCCAATGCTGCTCTCCAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | ATCCAATGGGTGAATGTGGGGCCAGGACTCAGTGGCTaGAGGATAGCCAGGACTATCATTGTCTATAATGAC | + |
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Preference number: 6 (lower is better) Translates to: IQWVNVGPGLSG*RIARTIIVYND Trigger: GTCATTATAGACAATGATAGTCCTGGCTATCCTTCAGCCACTGAGTCCTGGCCCCACATTCACCCATTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | ATGGGAACACCAGCTATCATCAGGTCTGCAGCAATTTaGGGGAGGCAGAGAAAAAGGCTATCTCTAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: MGTPAIIRSAAI*GRQRKRLSLEE Trigger: CTCCTCTAGAGATAGCCTTTTTCTCTGCCTCCCTCAAATTGCTGCAGACCTGATGATAGCTGGTGTTCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | TTGCTCCCTAGGTGGTCACAGAACAAATCCAGCCAGTaGGATGCAGTGCTGCCTTTAGCTTTAGCTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLPRWSQNKSSQ*DAVLPLALATF Trigger: AAAGGTAGCTAAAGCTAAAGGCAGCACTGCATCTCACTGGCTGGATTTGTTCTGTGACCACCTAGGGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | CTCATGGTCCCAATTCTGGGATTTGTTGTTGAGTTCTaGAGCTCGAAGTCCTTCTGTGTCTATAACAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LMVPILGFVVEF*SSKSFCVYNKH Trigger: GTGCTTGTTATAGACACAGAAGGACTTCGAGCTCCAGAACTCAACAACAAATCCCAGAATTGGGACCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CAA 72 bp | CAGTTTCTGCTCCAGTCTCTTCCGTCCTTCCATAGTTaGGTCTTTTGCTGTAACTTCTCCCACATTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: QFLLQSLPSFHS*VFCCNFSHILM Trigger: CATCAGAATGTGGGAGAAGTTACAGCAAAAGACCAAACTATGGAAGGACGGAAGAGACTGGAGCAGAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CAA 90 bp | CATTTCATCCAGTTTCTGCTCCAGTCTCTTCCGTCCTTCCATAGTTaGGTCTTTTGCTGTAACTTCTCCCACATTCTGATGGACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HFIQFLLQSLPSFHS*VFCCNFSHILMDKE Trigger: CTCTTTGTCCATCAGAATGTGGGAGAAGTTACAGCAAAAGACCAAACTATGGAAGGACGGAAGAGACTGGAGCAGAAACTGGATGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | CTTTACATCAGCCAAGTGCTCACTTTTGAAACCTTCTaGAATGGCTTTCCAGCAGTAGATTCCACCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LYISQVLTFETF*NGFPAVDSTQL Trigger: CAACTGGGTGGAATCTACTGCTGGAAAGCCATTTCAGAAGGTTTCAAAAGTGAGCACTTGGCTGATGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | AAGCTGAGTTGTTGGGTGTGTTCCTTTGCATCTCCATaGAGACTGGTGAAGGTCAGACAATTTTCAAACGTG | + |
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Preference number: 6 (lower is better) Translates to: KLSCWVCSFASP*RLVKVRQFSNV Trigger: CACGTTTGAAAATTGTCTGACCTTCACCAGTCTTCATGGAGATGCAAAGGAACACACCCAACAACTCAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | CTTGGAGGAGTTCGAGAACAGAGCGCATTAAATCATTaGGAGGAAAGGCTTTTTCCAACTGTTGACGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: LGGVREQSALNH*EERLFPTVDVE Trigger: TTCGACGTCAACAGTTGGAAAAAGCCTTTCCTCTCAATGATTTAATGCGCTCTGTTCTCGAACTCCTCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | GTGCTGCCTTTAGCTTTAGCTACCTTTGTGGAGTTATaGATGGCAGACAGGATAGTATTCTTGATGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: VLPLALATFVEL*MADRIVFLMSP Trigger: AGGTGACATCAAGAATACTATCCTGTCTGCCATTCATAACTCCACAAAGGTAGCTAAAGCTAAAGGCAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | GTCTGCTCCAGGAGTTCTTCAATAGTTTTTAGTTCCTaGAGAGCAGCATTGGAGAGTTCAAGATCATTGATG | + |
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Preference number: 6 (lower is better) Translates to: VCSRSSSIVFSS*RAALESSRSLM Trigger: CATCAATGATCTTGAACTCTCCAATGCTGCTCTCCAGGAACTAAAAACTATTGAAGAACTCCTGGAGCAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | AAGTTTCCAAGGCCAATGACTAATGTTGCCAACTCATaGTCCCAATTCTGGGATTTGTTGTTGAGTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KFPRPMTNVANS*SQFWDLLLSSG Trigger: TCCAGAACTCAACAACAAATCCCAGAATTGGGACCATGAGTTGGCAACATTAGTCATTGGCCTTGGAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | CTTGCTACACTACTAGTACAAACATTAATGTGGAACTaGTCTGTTTTATGCCAATGCCAACCACTGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: LATLLVQTLMWN*SVLCQCQPLTA Trigger: GGCTGTCAGTGGTTGGCATTGGCATAAAACAGACCAGTTCCACATTAATGTTTGTACTAGTAGTGTAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | CATCTGCTGATTTCTGTGACTGTAGCTCTTGTCCTGTaGAGATTTACTTGCATCTTGCCAACTTTTCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: HLLISVTVALVL*RFTCILPTFPN Trigger: ATTAGGAAAAGTTGGCAAGATGCAAGTAAATCTCCACAGGACAAGAGCTACAGTCACAGAAATCAGCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | TCTGATATTTTCAAGATCCTTCCCCTAGATTCCTGCTaGGCAGTTGAAAGAATTTCATTCCTTAGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SDIFKILPLDSC*AVERISFLSSW Trigger: CCAGGAACTAAGGAATGAAATTCTTTCAACTGCCCAGCAGGAATCTAGGGGAAGGATCTTGAAAATATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | GAAATAGAATGGAAGCTCCTTTTCAGACCTTGGCTGTaGATTGTACACAGAGGTCTTATAGATCAGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: EIEWKLLFRPWL*IVHRGLIDQME Trigger: TTCCATCTGATCTATAAGACCTCTGTGTACAATTCACAGCCAAGGTCTGAAAAGGAGCTTCCATTCTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | AGGAGACAGTGTTTGTTGCTTCCTTTGCAGTGTCTGTaGAAAAACACGTCATGTTTACGTTTACTGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RRQCLLLPLQCL*KNTSCLRLLRR Trigger: TCTTCTCAGTAAACGTAAACATGACGTGTTTTTTCACAGACACTGCAAAGGAAGCAACAAACACTGTCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | CTCAATGTCAGGAACAATTTCATCTATGTGCTTACTTaGACAATCCTCTTCTACTTCCCTCATTGCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: LNVRNNFIYVLT*TILFYFPHCRI Trigger: GATCCTGCAATGAGGGAAGTAGAAGAGGATTGTTCAAGTAAGCACATAGATGAAATTGTTCCTGACATTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | AGCAGATCAAAGGTGTTGATGACTGCCAGAGGTGTCTaGCAAGCTTTTGGTTTTCTTTATTGTTATCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SRSKVLMTARGV*QAFGFLYCYQK Trigger: TTTCTGATAACAATAAAGAAAACCAAAAGCTTGTCAGACACCTCTGGCAGTCATCAACACCTTTGATCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | GCCAGGACTATCATTGTCTATAATGACATCGTCATATaGATCAATATCTTCATTTTCGTGATTGGAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: ARTIIVYNDIVI*INIFIFVIGGT Trigger: GGTTCCTCCAATCACGAAAATGAAGATATTGATCCATATGACGATGTCATTATAGACAATGATAGTCCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS CCA 72 bp | ATATTACTTGCTACACTACTAGTACAAACATTAATGTaGAACTGGTCTGTTTTATGCCAATGCCAACCACTG | + |
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Preference number: 6 (lower is better) Translates to: ILLATLLVQTLM*NWSVLCQCQPL Trigger: CAGTGGTTGGCATTGGCATAAAACAGACCAGTTCCACATTAATGTTTGTACTAGTAGTGTAGCAAGTAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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| CDS TCA 72 bp | AAGATACATCATAAATCCAACTTGTCCAAAGTTGCCTaGATTTCTCATGCAACTCTTCATCACTTAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: KIHHKSNLSKVA*ISHATLHHLIP Trigger: AGGAATTAAGTGATGAAGAGTTGCATGAGAAATTCAGGCAACTTTGGACAAGTTGGATTTATGATGTATCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106766.9 ENSMUST00000176467.8 |
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