Pregenerated sensors for GUSB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025534Ensembl transcript IDs: ENSMUST00000026613.14, ENSMUST00000111307.2, ENSMUST00000111308.8, ENSMUST00000201801.4
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAACGGTCTGCTTCCGAAACACTGGGTTCTCGGCCCTGAACCGTaGCCTCCGGTTTCGTTGGCAATCCTCCAGTATCTCTCTCGCAAA | + |
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Preference number: 1 (lower is better) Translates to: VNGLLPKHWVLGPEP*PPVSLAILQYLSRK Trigger: TTTGCGAGAGAGATACTGGAGGATTGCCAACGAAACCGGAGGTCACGGTTCAGGGCCGAGAACCCAGTGTTTCGGAAGCAGACCGTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR GCA 90 bp | AAGCCGGAAATCTCAGACAGTACCCATTTAGCCACCTGTCCTGGTTaGCTGCTGTCACCAGGTGGCAGCAAAGGACCTTCCTTAGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: KPEISDSTHLATCPG*LLSPGGSKGPSLAP Trigger: TGGGGCTAAGGAAGGTCCTTTGCTGCCACCTGGTGACAGCAGGCAACCAGGACAGGTGGCTAAATGGGTACTGTCTGAGATTTCCGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR CCA 90 bp | CATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTaGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGGTGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HTCGTRRGQKGIWIT*EMEDQLIVSHQVGA Trigger: AGCACCCACCTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| 3UTR TCA 90 bp | TTAGAACGTGAACGGTCTGCTTCCGAAACACTGGGTTCTCGGCCCTaGACCGTGACCTCCGGTTTCGTTGGCAATCCTCCAGTATCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LERERSASETLGSRP*TVTSGFVGNPPVSL Trigger: GAGAGATACTGGAGGATTGCCAACGAAACCGGAGGTCACGGTTCAGGGCCGAGAACCCAGTGTTTCGGAAGCAGACCGTTCACGTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR GCA 90 bp | GAGGTCCAGGGCTTTGGTGTGGGTGATCAGCGTCTTAAAGTAATATaGGGCGGGTTTCAGAGCAGAGGAAGGCTCATTGGCCACAGACCA | + |
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Preference number: 1 (lower is better) Translates to: EVQGFGVGDQRLKVI*GGFQSRGRLIGHRP Trigger: TGGTCTGTGGCCAATGAGCCTTCCTCTGCTCTGAAACCCGCCGCATATTACTTTAAGACGCTGATCACCCACACCAAAGCCCTGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR GCA 90 bp | GTAGCTGTTTACACAGATAACATCCACGTACGGGGCCCCCAGGTCTaGATCATATTTGGCGTTGCTCACAAAGGTCACGGGACGGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VAVYTDNIHVRGPQV*IIFGVAHKGHGTGE Trigger: CTCACCCGTCCCGTGACCTTTGTGAGCAACGCCAAATATGATGCAGACCTGGGGGCCCCGTACGTGGATGTTATCTGTGTAAACAGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR CCA 90 bp | CACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTaGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: HIPHTCGTRRGQKGI*ITWEMEDQLIVSHQ Trigger: CTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| 3UTR CCA 90 bp | GAAAAAGCCGGAAATCTCAGACAGTACCCATTTAGCCACCTGTCCTaGTTGCCTGCTGTCACCAGGTGGCAGCAAAGGACCTTCCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: EKAGNLRQYPFSHLS*LPAVTRWQQRTFLS Trigger: GCTAAGGAAGGTCCTTTGCTGCCACCTGGTGACAGCAGGCAACCAGGACAGGTGGCTAAATGGGTACTGTCTGAGATTTCCGGCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR GCA 90 bp | TGCCACCCTCATCCAAAAGTTGCACTTCTAGCTGGAAATGTTCACTaGCCTGCACAGAAATCCAGTAGGTCACCAGCCCTGTGGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: CHPHPKVALLAGNVH*PAQKSSRSPALWDR Trigger: TCTGTCCCACAGGGCTGGTGACCTACTGGATTTCTGTGCAGGGCAGTGAACATTTCCAGCTAGAAGTGCAACTTTTGGATGAGGGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR GCA 90 bp | TTCCCTGTCCCATGGGCCACGACTTTGCCACCCTCATCCAAAAGTTaGACTTCTAGCTGGAAATGTTCACTGCCCTGCACAGAAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: FPVPWATTLPPSSKS*TSSWKCSLPCTEIQ Trigger: CTGGATTTCTGTGCAGGGCAGTGAACATTTCCAGCTAGAAGTGCAACTTTTGGATGAGGGTGGCAAAGTCGTGGCCCATGGGACAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111308.8 ENSMUST00000201801.4 |
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| 3UTR CCA 90 bp | AATGTTCACTGCCCTGCACAGAAATCCAGTAGGTCACCAGCCCTGTaGGACAGAAACAGATATCATACCAGTCCCAGAAGTCCCCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: NVHCPAQKSSRSPAL*DRNRYHTSPRSPLR Trigger: CCTAAGGGGACTTCTGGGACTGGTATGATATCTGTTTCTGTCCCACAGGGCTGGTGACCTACTGGATTTCTGTGCAGGGCAGTGAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR TCA 90 bp | TTTGTTTTGTTGGGAGGTGGGGGTTGGAGGGACACACTGATTGTTTaGGACAGGGTCTCACTATGGAGCTCTGGCTGTCTTGGAATTCAC | + |
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Preference number: 1 (lower is better) Translates to: FVLLGGGGWRDTLIV*DRVSLWSSGCLGIH Trigger: GTGAATTCCAAGACAGCCAGAGCTCCATAGTGAGACCCTGTCTCAAACAATCAGTGTGTCCCTCCAACCCCCACCTCCCAACAAAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR CCA 90 bp | CTCCATAGACAAGGCTGGCTCCAACTTATAGAGATCCACCTGCCTTaGCTCCCAAATTCTGGGATTAAAAGTATGTGCCACCACAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: LHRQGWLQLIEIHLP*LPNSGIKSMCHHSS Trigger: CGAGCTGTGGTGGCACATACTTTTAATCCCAGAATTTGGGAGCCAAGGCAGGTGGATCTCTATAAGTTGGAGCCAGCCTTGTCTATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR TCA 90 bp | ATTCTCCAACACCCCTGGTGCCTACGTATCCCACAAGCCTGCACTTaGGATGCAGAAATGACAGTCTCTGTCTTTAACCAGAACATGATC | + |
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Preference number: 1 (lower is better) Translates to: ILQHPWCLRIPQACT*DAEMTVSVFNQNMI Trigger: GATCATGTTCTGGTTAAAGACAGAGACTGTCATTTCTGCATCTCAAGTGCAGGCTTGTGGGATACGTAGGCACCAGGGGTGTTGGAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR TCA 90 bp | AGATTAGGAGTTACAAGGAGGAAGGAAGTGACCCAATGTTTTGAGTaGTGTCACTTTAGACAAGACCCCACCTGTCATTGGTCCTCACTT | + |
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Preference number: 1 (lower is better) Translates to: RLGVTRRKEVTQCFE*CHFRQDPTCHWSSL Trigger: AAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAAAGTGACATCACTCAAAACATTGGGTCACTTCCTTCCTCCTTGTAACTCCTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | GGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGGTTTTGGGCTGTCTCTaGCGAGTGAAGATCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTRRGQKGIWITWEMEDQVLGCL*RVKIPF Trigger: GAAGGGGATCTTCACTCGCCAGAGACAGCCCAAAAC...CTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCTCGTGGATCCCTGGGATTGCGTCTGCTCCATACTCGCTCTGGATAATCACCAGAGGTTGGCACTaGGAACCTGAAGTTGACCCT | + |
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Preference number: 2 (lower is better) Translates to: GSSWIPGIASAPYSLWIITRGWH*EPEVDP Trigger: AGGGTCAACTTCAGGTTCCCAGTGCCAACCTCTGGT...GATTATCCAGAGCGAGTATGGAGCAGACGCAATCCCAGGGATCCACGAGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR CCA 90 bp | GGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGGGTCTGCATCATATTTaGCGTTGCTCACAAAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GTRRGQKGIWITWEMEDQGLHHI*RCSQRS Trigger: TGACCTTTGTGAGCAACGCCAAATATGATGCAGACC...CTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR CAA 90 bp | AAGGCCGAAGTTTTGGGCTGTCTCTGGCGAGTGAAGATCCCCTTCTaGTTTCCGATTACTCTCAGCGGTGACTGGTTCGTCATGAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: KAEVLGCLWRVKIPF*FPITLSGDWFVMKS Trigger: CGACTTCATGACGAACCAGTCACCGCTGAGAGTAATCGGAAACAAGAAGGGGATCTTCACTCGCCAGAGACAGCCCAAAACTTCGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTCTGGCTGTCTTGGAATTCACTAGGGAGACCCGGCTGACCTCAGCGACTCCCTCATCCAAAAGTTaGACTTCTAGCTGGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: GALAVLEFTRETRLTSATPSSKS*TSSWKC Trigger: ACATTTCCAGCTAGAAGTGCAACTTTTGGATGAGGG...AGTCGCTGAGGTCAGCCGGGTCTCCCTAGTGAATTCCAAGACAGCCAGAGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | GACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACCAGACCCCACCTGTCATTaGTCCTCACTTCCTTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: DKTPPVIGPHFLAKEDPPDPTCH*SSLPCK Trigger: TTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTC...TGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGATCCACCTGCCTTGGCTCCCAAATTCTGGGATTAAAAGTATGTGCCACTGGTTCCCTGTCCCATaGGCCACGACTTTGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: IEIHLPWLPNSGIKSMCHWFPVP*ATTLPP Trigger: GGGTGGCAAAGTCGTGGCCCATGGGACAGGGAACCA...GTGGCACATACTTTTAATCCCAGAATTTGGGAGCCAAGGCAGGTGGATCTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTTGTAGCTAAGGATGACCTAGAACTCCTGATTCTCCTGCCTGTCCCTCCCTGGGATTTGTTTTGTTaGGAGGTGGGGGTTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SLVAKDDLELLILLPVPPWDLFC*EVGVGG Trigger: CCCTCCAACCCCCACCTCCCAACAAAACAAATCCCA...GGGAGGGACAGGCAGGAGAATCAGGAGTTCTAGGTCATCCTTAGCTACAAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCTGGTTCCCTGTCCCATaGGCCACGACTTTGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: DTSQQDILLSLRHCKLLSWFPVP*ATTLPP Trigger: GGGTGGCAAAGTCGTGGCCCATGGGACAGGGAACCA...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR GCA 90 bp | TCACTTGTAGCTAAGGATGACCTAGAACTCCTGATTCTCCTGCCTGTCCCTCCCGCTGGAAATGTTCACTaGCCTGCACAGAAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SLVAKDDLELLILLPVPPAGNVH*PAQKSS Trigger: ACTGGATTTCTGTGCAGGGCAGTGAACATTTCCAGC...GGGAGGGACAGGCAGGAGAATCAGGAGTTCTAGGTCATCCTTAGCTACAAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCAGACCCCACCTGTCATTaGTCCTCACTTCCTTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPDPTCH*SSLPCK Trigger: TTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTC...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACCATTTCCTCTTGGGAATTaGGATAAAAATGGACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: DKTPPVIGPHFLAKEDPPFPLGN*DKNGPS Trigger: GCTGGGTCCATTTTTATCTCAATTCCCAAGAGGAAA...TGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | AGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACCAGAAACAAGGAGGAAGGAAGTaGCCCAATGTTTTGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: RPHLSLVLTSLQRKTHQKQGGRK*PNVLSD Trigger: ATCACTCAAAACATTGGGTCACTTCCTTCCTCCTTG...TTTCTGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | CCACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCCTTTGAGTCTGCAGTaGGGTAGTTGTAACTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PHTTYMWYPQGPKGHLDHPLSLQ*GSCNFR Trigger: TCTAAAGTTACAACTACCTCACTGCAGACTCAAAGG...GTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACTGGTCCTCACTTCCTTaGAAAGGAAGACCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: TLDKTPPVIGPHFLAKEDWSSLP*KGRPTR Trigger: TCTGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCA...GTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR CAA 90 bp | TTGGCAATCCTCCAGTATCTCTCTCGCAAAATAAAGGCCGAAGTTTaGGGCTGTCTCTGGCGAGTGAAGATCCCCTTCTTGTTTCCGATT | + |
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Preference number: 2 (lower is better) Translates to: LAILQYLSRKIKAEV*GCLWRVKIPFLFPI Trigger: AATCGGAAACAAGAAGGGGATCTTCACTCGCCAGAGACAGCCCAAAACTTCGGCCTTTATTTTGCGAGAGAGATACTGGAGGATTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCAGGGCTAAAAGATGCTTaGAGCCTTTTTCTCCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPGLKDA*SLFLLR Trigger: CCTAAGGAGAAAAAGGCTTCAAGCATCTTTTAGCCC...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTCAGACAGTACCCATTTAGCCACCTGTCCTGGTTGCCTGCTGTCACCAGGACCCAATGTTTTGAGTaGTGTCACTTTAGACAAGAC | + |
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Preference number: 2 (lower is better) Translates to: NLRQYPFSHLSWLPAVTRTQCFE*CHFRQD Trigger: GTCTTGTCTAAAGTGACATCACTCAAAACATTGGGT...CCTGGTGACAGCAGGCAACCAGGACAGGTGGCTAAATGGGTACTGTCTGAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACAAGGAGGAAGGAAGTaGCCCAATGTTTTGAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPQGGRK*PNVLSD Trigger: ATCACTCAAAACATTGGGTCACTTCCTTCCTCCTTG...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCAGGGAGGGCTAAAAGATaGTTGAAGCCTTTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPGRAKR*LKPFSP Trigger: AGGAGAAAAAGGCTTCAAGCATCTTTTAGCCCTCCC...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCTCCATCACCTCTAGGTaGTGCCGAAGTGACTCGTTG | + |
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Preference number: 2 (lower is better) Translates to: DTSQQDILLSLRHCKLLSSITSR*CRSDSL Trigger: CAACGAGTCACTTCGGCACCACCTAGAGGTGATGGA...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCATTTCCTCTTGGGAATTaGGATAAAAATGGACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPFPLGN*DKNGPS Trigger: GCTGGGTCCATTTTTATCTCAATTCCCAAGAGGAAA...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACGGGAGGGCTAAAAGATaGTTGAAGCCTTTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TLDKTPPVIGPHFLAKEDGRAKR*LKPFSP Trigger: AGGAGAAAAAGGCTTCAAGCATCTTTTAGCCCTCCC...GTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGATCCACCTGCCTTGGCTCCCAAATTCTGGGATTAAAAGTATGTGCCACTTCACAATTCACAGCTaGACTCTCCCACAAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: IEIHLPWLPNSGIKSMCHFTIHS*TLPQSD Trigger: GTCACTTTGTGGGAGAGTCCAGCTGTGAATTGTGAA...GTGGCACATACTTTTAATCCCAGAATTTGGGAGCCAAGGCAGGTGGATCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTTGTAGCTAAGGATGACCTAGAACTCCTGATTCTCCTGCCTGTCCCTCCCCATCTCTCTGCTGTTTaGTTTTGGTTATGTTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLVAKDDLELLILLPVPPHLSAV*FWLCFG Trigger: ACCAAAACATAACCAAAACCAAACAGCAGAGAGATG...GGGAGGGACAGGCAGGAGAATCAGGAGTTCTAGGTCATCCTTAGCTACAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGGGTTTCTCTGTGTAGCCCTAAATGTTCTGGAACTCCATAGACAAGGCGGGCTAAAAGATGCTTaGAGCCTTTTTCTCCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: KTGFLCVALNVLELHRQGGLKDA*SLFLLR Trigger: CCTAAGGAGAAAAAGGCTTCAAGCATCTTTTAGCCC...GCCTTGTCTATGGAGTTCCAGAACATTTAGGGCTACACAGAGAAACCCTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR-3UTR TCA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCAATCCTCGTGCTTATTaGCCCCTTGGAAATAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: DTSQQDILLSLRHCKLLSNPRAY*PLGNRR Trigger: CCTTCTATTTCCAAGGGGTCAATAAGCACGAGGATT...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR-3UTR GCA 90 bp | CTGAATCACCTCCAAATGCCCATAGTCATGATACCAAGAAAAGTAGCTGTTTACGCCGAAGTGACTCGTTaGCAAAACTCTGAGGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LNHLQMPIVMIPRKVAVYAEVTR*QNSEVA Trigger: TGCTACCTCAGAGTTTTGGCAACGAGTCACTTCGGC...GTAAACAGCTACTTTTCTTGGTATCATGACTATGGGCATTTGGAGGTGATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| 3UTR CCA 72 bp | TTTAGCCACCTGTCCTGGTTGCCTGCTGTCACCAGGTaGCAGCAAAGGACCTTCCTTAGCCCCAGTCCCACA | + |
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Preference number: 3 (lower is better) Translates to: FSHLSWLPAVTR*QQRTFLSPSPT Trigger: TGTGGGACTGGGGCTAAGGAAGGTCCTTTGCTGCCACCTGGTGACAGCAGGCAACCAGGACAGGTGGCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| 3UTR CCA 72 bp | GGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTaGGAAATGGAGGACCAGCTCATAGTTAGCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: GTRRGQKGIWIT*EMEDQLIVSHQ Trigger: CTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| 3UTR CCA 72 bp | CTCACTGAACATGCGAGGCGGGTCCTCGTGGATCCCTaGGATTGCGTCTGCTCCATACTCGCTCTGGATAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTEHARRVLVDP*DCVCSILALDN Trigger: ATTATCCAGAGCGAGTATGGAGCAGACGCAATCCCAGGGATCCACGAGGACCCGCCTCGCATGTTCAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGGTGCTTATTGACCCCTaGGAAATAGAAGGGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GTRRGQKGIWITWEMEDQVLIDP*EIEGLP Trigger: GGGAAGCCCTTCTATTTCCAAGGGGTCAATAAGCAC...CTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| 3UTR GCA 72 bp | GTTGACCCTGGTTCCCTGTCCCATGGGCCACGACTTTaGCACCCTCATCCAAAAGTTGCACTTCTAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VDPGSLSHGPRL*HPHPKVALLAG Trigger: TCCAGCTAGAAGTGCAACTTTTGGATGAGGGTGGCAAAGTCGTGGCCCATGGGACAGGGAACCAGGGTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111308.8 ENSMUST00000201801.4 |
||
| 3UTR GCA 72 bp | ATCTCAGACAGTACCCATTTAGCCACCTGTCCTGGTTaGCTGCTGTCACCAGGTGGCAGCAAAGGACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISDSTHLATCPG*LLSPGGSKGPS Trigger: GGAAGGTCCTTTGCTGCCACCTGGTGACAGCAGGCAACCAGGACAGGTGGCTAAATGGGTACTGTCTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR CCA 72 bp | GGAAATCTCAGACAGTACCCATTTAGCCACCTGTCCTaGTTGCCTGCTGTCACCAGGTGGCAGCAAAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: GNLRQYPFSHLS*LPAVTRWQQRT Trigger: GGTCCTTTGCTGCCACCTGGTGACAGCAGGCAACCAGGACAGGTGGCTAAATGGGTACTGTCTGAGATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCCTCGTGGATCCCTGGGATTGCGTCTGCTCCATACTCGCTCTGGATAATCTCACAGACTCAGTTGTaGTCACCTTCACCTCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSWIPGIASAPYSLWIISQTQL*SPSPPR Trigger: CCTTGGAGGTGAAGGTGACAACAACTGAGTCTGTGA...GATTATCCAGAGCGAGTATGGAGCAGACGCAATCCCAGGGATCCACGAGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| 3UTR GCA 72 bp | TACACAGATAACATCCACGTACGGGGCCCCCAGGTCTaGATCATATTTGGCGTTGCTCACAAAGGTCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: YTDNIHVRGPQV*IIFGVAHKGHG Trigger: CCCGTGACCTTTGTGAGCAACGCCAAATATGATGCAGACCTGGGGGCCCCGTACGTGGATGTTATCTGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGATCCACCTGCCTTGGCTCCCAAATTCTGGGATTAAAAGTATGTGCCACAGCCACCTGTCCTGGTaGCCTGCTGTCACCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IEIHLPWLPNSGIKSMCHSHLSW*PAVTRW Trigger: CCACCTGGTGACAGCAGGCAACCAGGACAGGTGGCT...GTGGCACATACTTTTAATCCCAGAATTTGGGAGCCAAGGCAGGTGGATCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR GCA 72 bp | AGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTaGAAAGGAAGACCCACCAGAAAGGTGTCAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RQDPTCHWSSLP*KGRPTRKVSAW Trigger: CCAAGCTGACACCTTTCTGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
||
| 3UTR GCA 72 bp | GGCTTTGGTGTGGGTGATCAGCGTCTTAAAGTAATATaGGGCGGGTTTCAGAGCAGAGGAAGGCTCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GFGVGDQRLKVI*GGFQSRGRLIG Trigger: GCCAATGAGCCTTCCTCTGCTCTGAAACCCGCCGCATATTACTTTAAGACGCTGATCACCCACACCAAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| 3UTR CCA 72 bp | CATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTaGATCACCTGGGAAATGGAGGACCAGCTCATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HTCGTRRGQKGI*ITWEMEDQLIV Trigger: AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| 3UTR-3UTR CAA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCAAGACCCCACCTGTCATaGGTCCTCACTTCCTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPRPHLS*VLTSLQ Trigger: TTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCT...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
||
| 3UTR TCA 72 bp | CACCCCTGGTGCCTACGTATCCCACAAGCCTGCACTTaGGATGCAGAAATGACAGTCTCTGTCTTTAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: HPWCLRIPQACT*DAEMTVSVFNQ Trigger: CTGGTTAAAGACAGAGACTGTCATTTCTGCATCTCAAGTGCAGGCTTGTGGGATACGTAGGCACCAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR CCA 72 bp | TGCCCTGCACAGAAATCCAGTAGGTCACCAGCCCTGTaGGACAGAAACAGATATCATACCAGTCCCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: CPAQKSSRSPAL*DRNRYHTSPRS Trigger: ACTTCTGGGACTGGTATGATATCTGTTTCTGTCCCACAGGGCTGGTGACCTACTGGATTTCTGTGCAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR GCA 72 bp | CATCCAAAAGTTGCACTTCTAGCTGGAAATGTTCACTaGCCTGCACAGAAATCCAGTAGGTCACCAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HPKVALLAGNVH*PAQKSSRSPAL Trigger: CAGGGCTGGTGACCTACTGGATTTCTGTGCAGGGCAGTGAACATTTCCAGCTAGAAGTGCAACTTTTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR GCA 72 bp | CATCCAAAAGTTGCACTTCTAGCTGGAAATGTTCACTaGCCTGCACAGAAATCCAGTAGGTCACCAGCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: HPKVALLAGNVH*PAQKSSRSPAR Trigger: TCGGGCTGGTGACCTACTGGATTTCTGTGCAGGGCAGTGAACATTTCCAGCTAGAAGTGCAACTTTTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| 3UTR CCA 72 bp | GTAGCCCTAAATGTTCTGGAACTCCATAGACAAGGCTaGCTCCAACTTATAGAGATCCACCTGCCTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VALNVLELHRQG*LQLIEIHLPWL Trigger: GAGCCAAGGCAGGTGGATCTCTATAAGTTGGAGCCAGCCTTGTCTATGGAGTTCCAGAACATTTAGGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCACGGAAGAAAAGCTTaGATGTCACTTCTAAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PHTTYMWYPQGPKGHLDHHGRKA*MSLLKS Trigger: GGACTTTAGAAGTGACATCAAAGCTTTTCTTCCGTG...GTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| 3UTR CCA 72 bp | CAAGGCTGGCTCCAACTTATAGAGATCCACCTGCCTTaGCTCCCAAATTCTGGGATTAAAAGTATGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGWLQLIEIHLP*LPNSGIKSMCH Trigger: GTGGCACATACTTTTAATCCCAGAATTTGGGAGCCAAGGCAGGTGGATCTCTATAAGTTGGAGCCAGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAACAGGGTTTCTCTGTGTAGCCCTAAATGTTCTGGAACTCCATAGACAAGGCAGAGATCCACCTGCCTaGGCTCCCAAATTCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KTGFLCVALNVLELHRQGRDPPA*APKFWD Trigger: ATCCCAGAATTTGGGAGCCAAGGCAGGTGGATCTCT...GCCTTGTCTATGGAGTTCCAGAACATTTAGGGCTACACAGAGAAACCCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTACTTCTAAAGTCCCCTaGTATCAGTTCACAAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: RGQKGIWITWEMEDQLIVTSKVP*YQFTKS Trigger: GGATTTTGTGAACTGATACAAGGGGACTTTAGAAGT...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| 3UTR TCA 72 bp | GACCTTCACAATTCACAGCTGGACTCTCCCACAAAGTaGCTGAAAAAGCCGGAAATCTCAGACAGTACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: DLHNSQLDSPTK*LKKPEISDSTH Trigger: ATGGGTACTGTCTGAGATTTCCGGCTTTTTCAGTCACTTTGTGGGAGAGTCCAGCTGTGAATTGTGAAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR GCA 72 bp | CTGCCTTGGCTCCCAAATTCTGGGATTAAAAGTATGTaGCACCACAGCTCGGCTGGTTTTGGGATTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPWLPNSGIKSM*HHSSAGFGICF Trigger: AAAACAAATCCCAAAACCAGCCGAGCTGTGGTGGCACATACTTTTAATCCCAGAATTTGGGAGCCAAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCCTTAGGTCCCAAGACAATAGCGAACAACTGCTTGTCCTTTTATTTATTAGACCCCACCTGTCATaGGTCCTCACTTCCTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPLRSQDNSEQLLVLLFIRPHLS*VLTSLQ Trigger: TTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCT...AATAAATAAAAGGACAAGCAGTTGTTCGCTATTGTCTTGGGACCTAAGGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| 3UTR TCA 72 bp | GTTACAAGGAGGAAGGAAGTGACCCAATGTTTTGAGTaGTGTCACTTTAGACAAGACCCCACCTGTCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: VTRRKEVTQCFE*CHFRQDPTCHW Trigger: CCAATGACAGGTGGGGTCTTGTCTAAAGTGACATCACTCAAAACATTGGGTCACTTCCTTCCTCCTTGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
||
| 3UTR-3UTR CAA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCCACGGAAGAAAAGCTTaGATGTCACTTCTAAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DTSQQDILLSLRHCKLLSHGRKA*MSLLKS Trigger: GGACTTTAGAAGTGACATCAAAGCTTTTCTTCCGTG...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| 3UTR-3UTR CAA 90 bp | AAACTAACAAATTATCTTGGACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCATCATATTTGGCGTaGCTCACAAAGGTCACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLTNYLGHLSAGHITEPKASYLA*LTKVTG Trigger: TCCCGTGACCTTTGTGAGCAACGCCAAATATGATGC...CTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTCCAAGATAATTTGTTAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| CDS-3UTR GCA 90 bp | TACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAGGTCGGCGCGGAAGTaGCACAGTCCGTCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YHIHVVPAGAKRAFGSPGRSARK*HSPSSA Trigger: GGCGCTGGACGGACTGTGGCACTTCCGCGCCGACCT...CCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| CDS-3UTR GCA 90 bp | CCACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACAGGTCGGCGCGGAAGTaGCACAGTCCGTCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHTTYMWYPQGPKGHLDHRSARK*HSPSSA Trigger: GGCGCTGGACGGACTGTGGCACTTCCGCGCCGACCT...GTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| CDS-3UTR TCA 90 bp | AAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGCTGGGTTCTCGGCCCTaGACCGTGACCTCCGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGIWITWEMEDQLIVSHQLGSRP*TVTSGF Trigger: GAAACCGGAGGTCACGGTTCAGGGCCGAGAACCCAG...CTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR GCA 90 bp | ACTTTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACAGGTCGGCGCGGAAGTaGCACAGTCCGTCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLDKTPPVIGPHFLAKEDRSARK*HSPSSA Trigger: GGCGCTGGACGGACTGTGGCACTTCCGCGCCGACCT...GTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCTGGTTCCCTGTCCCATaGGCCACGACTTTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GQKGIWITWEMEDQLIVSWFPVP*ATTLPP Trigger: GGGTGGCAAAGTCGTGGCCCATGGGACAGGGAACCA...GCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGGTTTCTCTGTGTAGCCCTAAATGTTCTGGAACTCCATAGACAAGGCAGGTCGGCGCGGAAGTaGCACAGTCCGTCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTGFLCVALNVLELHRQGRSARK*HSPSSA Trigger: GGCGCTGGACGGACTGTGGCACTTCCGCGCCGACCT...GCCTTGTCTATGGAGTTCCAGAACATTTAGGGCTACACAGAGAAACCCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| CDS-3UTR CCA 90 bp | CCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAACCAGAGGTTGGCACTaGGAACCTGAAGTTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHTCGTRRGQKGIWITWETRGWH*EPEVDP Trigger: AGGGTCAACTTCAGGTTCCCAGTGCCAACCTCTGGT...TTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR CCA 90 bp | TGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGGTGGGTGCTAAGGCCACCAGAGGTTaGCACTGGGAACCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WITWEMEDQLIVSHQVGAKATRG*HWEPEV Trigger: AACTTCAGGTTCCCAGTGCCAACCTCTGGTGGCCTT...AGCACCCACCTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR TCA 90 bp | ACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCAATCCTCGTGCTTATTaGCCCCTTGGAAATAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRGQKGIWITWEMEDQLNPRAY*PLGNRR Trigger: CCTTCTATTTCCAAGGGGTCAATAAGCACGAGGATT...GAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR GCA 90 bp | TGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGGTGGGTGCTGCCGAAGTGACTCGTTaGCAAAACTCTGAGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WITWEMEDQLIVSHQVGAAEVTR*QNSEVA Trigger: TGCTACCTCAGAGTTTTGGCAACGAGTCACTTCGGC...AGCACCCACCTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR CCA 90 bp | GACCCTGGTTCCCTGTCCCATGGGCCACGACTTTGCCACCCTCATCCAAAAGTTGGACAAAGTAACCCTTaGGATACATGGAGGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPGSLSHGPRLCHPHPKVGQSNP*DTWRCQ Trigger: CTGACACCTCCATGTATCCCAAGGGTTACTTTGTCC...AACTTTTGGATGAGGGTGGCAAAGTCGTGGCCCATGGGACAGGGAACCAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
||
| CDS-3UTR CCA 90 bp | CCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAATCCAGGGCTTTGGTGTaGGTGATCAGCGTCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHTCGTRRGQKGIWITWESRALV*VISVLK Trigger: CTTTAAGACGCTGATCACCCACACCAAAGCCCTGGA...TTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| 3UTR CAA 72 bp | ACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTaGGATCACCTGGGAAATGGAGGACCAGCTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TYMWYPQGPKGH*DHLGNGGPAHS Trigger: ACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| 3UTR CAA 72 bp | GTTTTGGGCTGTCTCTGGCGAGTGAAGATCCCCTTCTaGTTTCCGATTACTCTCAGCGGTGACTGGTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGCLWRVKIPF*FPITLSGDWFV Trigger: GACGAACCAGTCACCGCTGAGAGTAATCGGAAACAAGAAGGGGATCTTCACTCGCCAGAGACAGCCCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
||
| CDS-3UTR TCA 90 bp | CCACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACTCGTTGCCAAAACTCTaGGGTAGCACAATGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PHTTYMWYPQGPKGHLDHSLPKL*GSTMPT Trigger: TGTGGGCATTGTGCTACCTCAGAGTTTTGGCAACGA...GTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTGTTTTGGGCTGTCTCTaGCGAGTGAAGATCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQKGIWITWEMEDQLIVVLGCL*RVKIPF Trigger: GAAGGGGATCTTCACTCGCCAGAGACAGCCCAAAAC...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR TCA 90 bp | TACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAATAATGGGCACTGTTaGTCCTCAACACCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YHIHVVPAGAKRAFGSPGNNGHC*SSTPLS Trigger: TGAGAGTGGTGTTGAGGATCAACAGTGCCCATTATT...CCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTCTATTCAGCTGTGGCTaGATCACCTCCAAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQKGIWITWEMEDQLIVLFSCG*ITSKCP Trigger: TGGGCATTTGGAGGTGATTCAGCCACAGCTGAATAG...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR GCA 90 bp | GGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGATTCACCCACACAACTaGATAATAATGGGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTRRGQKGIWITWEMEDQIHPHN*IIMGTV Trigger: AACAGTGCCCATTATTATGCAGTTGTGTGGGTGAAT...CTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR CCA 90 bp | CCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAGGTCTGCATCATATTTaGCGTTGCTCACAAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTCGTRRGQKGIWITWEGLHHI*RCSQRS Trigger: TGACCTTTGTGAGCAACGCCAAATATGATGCAGACC...TTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
||
| CDS-3UTR TCA 90 bp | CCACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACAATAATGGGCACTGTTaGTCCTCAACACCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTTYMWYPQGPKGHLDHNNGHC*SSTPLS Trigger: TGAGAGTGGTGTTGAGGATCAACAGTGCCCATTATT...GTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| CDS-3UTR TCA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTTCATGTTCCACCACATaGATCCCATTCACCCACACA | + |
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Preference number: 4 (lower is better) Translates to: RGQKGIWITWEMEDQLIVSCSTT*IPFTHT Trigger: TGTGTGGGTGAATGGGATTCATGTGGTGGAACATGA...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR TCA 90 bp | AAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACCAGAATCATGTTCCACCACATaGATCCCATTCACCCACACA | + |
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Preference number: 4 (lower is better) Translates to: KTPPVIGPHFLAKEDPPESCSTT*IPFTHT Trigger: TGTGTGGGTGAATGGGATTCATGTGGTGGAACATGA...TTCTGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| CDS-3UTR GCA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCCGGGGCCCCCAGGTCTaGATCATATTTGGCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: DTSQQDILLSLRHCKLLSRGPQV*IIFGVA Trigger: AGCAACGCCAAATATGATGCAGACCTGGGGGCCCCG...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CCA 90 bp | GGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCGGACAAAGTAACCCTTaGGATACATGGAGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GQKGIWITWEMEDQLIVSGQSNP*DTWRCQ Trigger: CTGACACCTCCATGTATCCCAAGGGTTACTTTGTCC...GCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| 3UTR CAA 72 bp | CTCCAGTATCTCTCTCGCAAAATAAAGGCCGAAGTTTaGGGCTGTCTCTGGCGAGTGAAGATCCCCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LQYLSRKIKAEV*GCLWRVKIPFL Trigger: CAAGAAGGGGATCTTCACTCGCCAGAGACAGCCCAAAACTTCGGCCTTTATTTTGCGAGAGAGATACTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| CDS-3UTR TCA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTTGGATAATCGGCTTCTaGTGCGTCTTATACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RGQKGIWITWEMEDQLIVWIIGF*CVLYQF Trigger: GAACTGGTATAAGACGCATCAGAAGCCGATTATCCA...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CCA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAACCCTTGGGATACATaGAGGTGTCAGTCTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RGQKGIWITWEMEDQLIVNPWDT*RCQSCR Trigger: TCTACAAGACTGACACCTCCATGTATCCCAAGGGTT...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR TCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCAAATAATGGGCACTGTTaGTCCTCAACACCACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPNNGHC*SSTPLS Trigger: TGAGAGTGGTGTTGAGGATCAACAGTGCCCATTATT...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| CDS-3UTR CCA 90 bp | TTAGACAAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCAAACCCTTGGGATACATaGAGGTGTCAGTCTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LDKTPPVIGPHFLAKEDPNPWDT*RCQSCR Trigger: TCTACAAGACTGACACCTCCATGTATCCCAAGGGTT...TGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTTTTCTGATCCAGAACTaGATGGTAATTCTCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RGQKGIWITWEMEDQLIVFLIQN*MVILQN Trigger: GTTCTGGAGAATTACCATTCAGTTCTGGATCAGAAA...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| 3UTR CAA 72 bp | CTGCACAGAAATCCAGTAGGTCACCAGCCCGATGTCTaGCTCCACATTAGTGATCACAGTGATATCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: LHRNPVGHQPDV*LHISDHSDIID Trigger: ATCGATGATATCACTGTGATCACTAATGTGGAGCAAGACATCGGGCTGGTGACCTACTGGATTTCTGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201801.4 |
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| CDS-3UTR GCA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCGCTGGAAATGTTCACTaGCCTGCACAGAAATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DTSQQDILLSLRHCKLLSAGNVH*PAQKSS Trigger: ACTGGATTTCTGTGCAGGGCAGTGAACATTTCCAGC...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CCA 90 bp | AAACTAACAAATTATCTTGGACACCTCTCAGCAGGACATATTACTGAGCCTAAGTCCATCACCTCTAGGTaGTGCCGAAGTGACTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: KLTNYLGHLSAGHITEPKSITSR*CRSDSL Trigger: CAACGAGTCACTTCGGCACCACCTAGAGGTGATGGA...CTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTCCAAGATAATTTGTTAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR GCA 90 bp | GTCACTTCTAAAGTCCCCTTGTATCAGTTCACAAAATCCCAAATAGAAACACTACCCTCATCCAAAAGTTaGACTTCTAGCTGGAAATGT | + |
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Preference number: 4 (lower is better) Translates to: VTSKVPLYQFTKSQIETLPSSKS*TSSWKC Trigger: ACATTTCCAGCTAGAAGTGCAACTTTTGGATGAGGG...TAGTGTTTCTATTTGGGATTTTGTGAACTGATACAAGGGGACTTTAGAAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | ACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCGCAGAGGAAGGCTCATaGGCCACAGACCACATCACA | + |
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Preference number: 5 (lower is better) Translates to: TRRGQKGIWITWEMEDQLAEEGS*ATDHIT Trigger: TGTGATGTGGTCTGTGGCCAATGAGCCTTCCTCTGC...GAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | CCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAGTGAGGTCCAGGGCTTaGGTGTGGGTGATCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: PHTCGTRRGQKGIWITWEVRSRA*VWVISV Trigger: GACGCTGATCACCCACACCAAAGCCCTGGACCTCAC...TTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | GGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGTCTTGGGTGATGTCATaGAAGCTAGAAGGGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: GTRRGQKGIWITWEMEDQSWVMS*KLEGTG Trigger: GCCTGTCCCTTCTAGCTTCAATGACATCACCCAAGA...CTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| CDS-3UTR CAA 90 bp | TGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGGTGGGTGCTCCACTCTGGACCAGCTaGCTAATGTCAGCCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: WITWEMEDQLIVSHQVGAPLWTS*LMSASK Trigger: CTTTGAGGCTGACATTAGCAAGCTGGTCCAGAGTGG...AGCACCCACCTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | TGGTTCCCTGTCCCATGGGCCACGACTTTGCCACCCTCATCCAAAAGTTGCACTTCTTGGGTGATGTCATaGAAGCTAGAAGGGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: WFPVPWATTLPPSSKSCTSWVMS*KLEGTG Trigger: GCCTGTCCCTTCTAGCTTCAATGACATCACCCAAGA...AGTGCAACTTTTGGATGAGGGTGGCAAAGTCGTGGCCCATGGGACAGGGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111308.8 ENSMUST00000201801.4 |
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| CDS-3UTR CAA 90 bp | CCACATACCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCCGAAGGGCTGCTTCTaGGGTGATGTCATTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PHTTYMWYPQGPKGHLDHPKGCF*GDVIEA Trigger: AGCTTCAATGACATCACCCAAGAAGCAGCCCTTCGG...GTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGGTATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| CDS-3UTR CAA 90 bp | CCACATACATGTGGTACCCGCAGGGGCCAAAAGGGCATTTGGATCACCTGGGAAGCATCATATTTGGCGTaGCTCACAAAGGTCACGGGA | + |
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Preference number: 5 (lower is better) Translates to: PHTCGTRRGQKGIWITWEASYLA*LTKVTG Trigger: TCCCGTGACCTTTGTGAGCAACGCCAAATATGATGC...TTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCACATGTATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | AAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACCAGAACCACTCTGGACCAGCTaGCTAATGTCAGCCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KTPPVIGPHFLAKEDPPEPLWTS*LMSASK Trigger: CTTTGAGGCTGACATTAGCAAGCTGGTCCAGAGTGG...TTCTGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111308.8 |
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| CDS-3UTR CAA 90 bp | AAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGTCTTGGGTGATGTCATaGAAGCTAGAAGGGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: KGIWITWEMEDQLIVSHQSWVMS*KLEGTG Trigger: GCCTGTCCCTTCTAGCTTCAATGACATCACCCAAGA...CTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000201801.4 |
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| CDS-3UTR CAA 90 bp | AAGACCCCACCTGTCATTGGTCCTCACTTCCTTGCAAAGGAAGACCCACCAGAATCTTGGGTGATGTCATaGAAGCTAGAAGGGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: KTPPVIGPHFLAKEDPPESWVMS*KLEGTG Trigger: GCCTGTCCCTTCTAGCTTCAATGACATCACCCAAGA...TTCTGGTGGGTCTTCCTTTGCAAGGAAGTGAGGACCAATGACAGGTGGGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000111308.8 |
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| CDS-3UTR CAA 90 bp | AAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTAGCCACCAGTCACAGACTCAGTTGTaGTCACCTTCACCTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: KGIWITWEMEDQLIVSHQSQTQL*SPSPPR Trigger: CCTTGGAGGTGAAGGTGACAACAACTGAGTCTGTGA...CTGGTGGCTAACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | AGGGGCCAAAAGGGCATTTGGATCACCTGGGAAATGGAGGACCAGCTCATAGTTGTGCTTATTGACCCCTaGGAAATAGAAGGGCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: RGQKGIWITWEMEDQLIVVLIDP*EIEGLP Trigger: GGGAAGCCCTTCTATTTCCAAGGGGTCAATAAGCAC...AACTATGAGCTGGTCCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS-3UTR CAA 90 bp | GACACCTCTCAGCAGGACATATTACTGAGCCTAAGGCACTGTAAGTTATTATCCAGGTCTGCATCATATTaGGCGTTGCTCACAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: DTSQQDILLSLRHCKLLSRSASY*ALLTKV Trigger: GACCTTTGTGAGCAACGCCAAATATGATGCAGACCT...GGATAATAACTTACAGTGCCTTAGGCTCAGTAATATGTCCTGCTGAGAGGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026613.14 |
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| CDS CCA 72 bp | CCTTGGGATACATGGAGGTGTCAGTCTTGTAGACGATaGTCCCCGGCGGAAGGGTATGAGGGGTCAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PWDTWRCQSCRR*SPAEGYEGSVC Trigger: ACACACTGACCCCTCATACCCTTCCGCCGGGGACCATCGTCTACAAGACTGACACCTCCATGTATCCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000111308.8 |
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| CDS CAA 72 bp | ATAAAGTCCCGAAGGGCTGCTTCTTGGGTGATGTCATaGAAGCTAGAAGGGACAGGCATGTCCAAGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: IKSRRAASWVMS*KLEGTGMSKTG Trigger: CCCAGTCTTGGACATGCCTGTCCCTTCTAGCTTCAATGACATCACCCAAGAAGCAGCCCTTCGGGACTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026613.14 ENSMUST00000111307.2 ENSMUST00000111308.8 ENSMUST00000201801.4 |
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| CDS TCA 72 bp | CTTGGGATACCACAACTGCATAATAATGGGCACTGTTaGTCCTCAACACCACTCTCATGTCGGTATCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGIPQLHNNGHC*SSTPLSCRYLG Trigger: CCCAAGATACCGACATGAGAGTGGTGTTGAGGATCAACAGTGCCCATTATTATGCAGTTGTGGTATCCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111307.2 ENSMUST00000201801.4 |
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| CDS GCA 72 bp | ATGTTCCACCACATGAATCCCATTCACCCACACAACTaGATAATAATGGGCACTGTTGATCCTCAACACCAC | + |
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Preference number: 6 (lower is better) Translates to: MFHHMNPIHPHN*IIMGTVDPQHH Trigger: GTGGTGTTGAGGATCAACAGTGCCCATTATTATGCAGTTGTGTGGGTGAATGGGATTCATGTGGTGGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026613.14 ENSMUST00000111308.8 |
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